Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010202

Physical Location & Seq

Genomic Coordinates Forward (+)

15198760 .. 15200548

Gene Structure 1789 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G133700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGGCTGCTATCTTCCGCCACATTTTACAGACTCCACCACCGCCCTCCTCCTCTTTCCCTCGCCCTGCTTCTTCTTCACCTTCATCTACACTTCTCTCAAGGCCCTCCTGCATCCGCGCCGCATCATCTCCCATGGACATTCACAACCAAGCGAGCAAAATAAAGTTCACAGACTTCCCCTACGTGTCGGCCCCACACAGGAACCTCATGGTTGATCTTGTATCGACATTAGAGACGCGCCTTGGCTCGGAGCTCCTCCCTTGTACCCTCCCTCCCGACGTACAATACTACCAGAACGAGACTGGCACCAACCATGCATCCCTCCACATCAGATCCGGCCTCGCCTCCTCCCCTGTTGATTTCATATTAGGAAGTTGGCTGCACTGTGAGCTACCAACAGGTGGAGCATTGAACATTACAAGCCTCTCATCCTATCTGAACCAAACCACAGATGCACCAAATTTCCTACTTGAGCTCATCCAGAGCAGCCCAACCTCCCTGGTCCTCATCCTTGACTTGCCTCCCAGAAAAGACCTTGTCCTCCACCCTGACTACCTGCAAACATTTTATCAAGACACCCAACTGGACACACCCAGGCAAAGGCTTGACAAACTTGCTGAGGCTAAACCCTACTTCTCCTCAGCGCTATACATCCGCAGTGTTGTGTCTCCAACAGCCATTTTGGTTCGGATTGAAGCAGAGGCTGATGGGCAGGGACAAAGCCTGGAGGAGATCATAGAGAACCATGTGGGTCCCATTGCAAAGGAGGTGCTGGGAATTTGGCTGGATCAATGTGCTTGTGGGAAGAGAGAAGTGGAAGAGGATGAGAGGGCTTACCTAAAGAAGAGGGATGATTTGATCAAGAGGAAGACTATTGAGATTGATTTGGGGTCCAATTTTCCTAGATTGTTTGGGCCTGATGCTGCTGATCGAGTATTGGGTGCCATTAAAGAAGTTTATAGGGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009814 GO:0009941 GO:0009987 GO:0010363 GO:0010941 GO:0015994 GO:0015996 GO:0016020 GO:0016491 GO:0016627 GO:0016636 GO:0019439 GO:0031347 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0033013 GO:0033015 GO:0034357 GO:0034641 GO:0042440 GO:0042651 GO:0043067 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045088 GO:0046149 GO:0046483 GO:0046700 GO:0048583 GO:0050776 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051187 GO:0051704 GO:0051707 GO:0051743 GO:0055035 GO:0055114 GO:0065007 GO:0071704 GO:0080134 GO:0080135 GO:0098542 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00860 ko01110 map00860 map01110

Pfam Domains

Protein Families

RCC_reductase

Protein Analysis

323

Amino Acids

35.68

Weight (kDa)

5.65

Isoelectric Point (pI)

58.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37000
fragaria_vesca	FvH4_7g06480
malus_domestica	MD15G1283600.v1.1
prunus_persica	Prupe.7G133700_v2.0.a1
pyrus_communis	pycom15g24660
rosa_chinensis	RchiOBHm_Chr1g0334851
rosa_laevigata	RLG00000029417
rosa_multiflora	Rmu_sc0000574.1_g000027 Rmu_sc0000574.1_g000042 Rmu_sc0006031.1_g000002
rosa_roxburghii	Rroxscaffold_4G00316400
rosa_rugosa	Rorug01G0116600.1 Rorug01G0117100
rosa_samantha	Rh1AG141000 Rh1BG108400 Rh1CG132900 Rh1DG145300
rosa_wichuraiana	Rw1G010710 Rw1G010770 Rw1G011630 Rw1G011660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	564
AccB1I	GGYRCC	2 cut(s)	305, 941
AccB7I	CCANNNNNTGG	1 cut(s)	401
AccII	CGCG	2 cut(s)	117, 238
AciI	CCGC	5 cut(s)	16, 41, 115, 120, 655
AclWI	GGATC	2 cut(s)	327, 795
AcsI	RAATTY	2 cut(s)	460, 777
AfaI	GTAC	2 cut(s)	265, 282
AfeI	AGCGCT	1 cut(s)	645
AfiI	CCNNNNNNNGG	4 cut(s)	198, 247, 401, 600
AflIII	ACRYGT	1 cut(s)	183
AgsI	TTSAA	2 cut(s)	412, 695
AjnI	CCWGG	3 cut(s)	498, 593, 723
AluBI	AGCT	3 cut(s)	253, 391, 475
AluI	AGCT	3 cut(s)	253, 391, 475
Alw21I	GWGCWC	2 cut(s)	255, 477
Alw26I	GTCTC	3 cut(s)	227, 293, 672
AlwI	GGATC	2 cut(s)	327, 795
AlwNI	CAGNNNCTG	1 cut(s)	704
Aor51HI	AGCGCT	1 cut(s)	645
AoxI	GGCC	4 cut(s)	101, 189, 337, 914
ApeKI	GCWGC	4 cut(s)	5, 379, 486, 923
ApoI	RAATTY	2 cut(s)	460, 777
AspLEI	GCGC	3 cut(s)	119, 240, 646
AspS9I	GGNCC	6 cut(s)	102, 190, 502, 752, 891, 914
AsuHPI	GGTGA	1 cut(s)	69
AvaII	GGWCC	3 cut(s)	502, 752, 891
BanI	GGYRCC	2 cut(s)	305, 941
BanII	GRGCYC	2 cut(s)	255, 477
BbsI	GAAGAC	1 cut(s)	875
Bbv12I	GWGCWC	2 cut(s)	255, 477
BbvCI	CCTCAGC	2 cut(s)	618, 640
BbvI	GCAGC	3 cut(s)	366, 498, 910
BccI	CCATC	1 cut(s)	701
BciT130I	CCWGG	3 cut(s)	500, 595, 725
BclI	TGATCA	1 cut(s)	858
BcoDI	GTCTC	3 cut(s)	227, 293, 672
BfaI	CTAG	1 cut(s)	903
BfoI	RGCGCY	1 cut(s)	647
BfuAI	ACCTGC	1 cut(s)	564
BisI	GCNGC	5 cut(s)	6, 120, 380, 487, 924
BlsI	GCNGC	5 cut(s)	7, 121, 381, 488, 925
Bme1390I	CCNGG	3 cut(s)	500, 595, 725
Bme18I	GGWCC	3 cut(s)	502, 752, 891
BmgT120I	GGNCC	6 cut(s)	102, 190, 502, 752, 891, 914
BmiI	GGNNCC	7 cut(s)	192, 203, 307, 753, 754, 892, 943
BmrFI	CCNGG	3 cut(s)	500, 595, 725
BmsI	GCATC	5 cut(s)	120, 131, 326, 442, 910
BpiI	GAAGAC	1 cut(s)	875
BpmI	CTGGAG	1 cut(s)	746
Bpu10I	CCTNAGC	2 cut(s)	618, 640
BpuEI	CTTGAG	2 cut(s)	82, 491
BsaAI	YACGTR	1 cut(s)	184
BsaJI	CCNNGG	4 cut(s)	132, 241, 498, 593
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	4 cut(s)	198, 247, 401, 600
Bse1I	ACTGG	2 cut(s)	307, 588
Bse3DI	GCAATG	1 cut(s)	756
BseBI	CCWGG	3 cut(s)	500, 595, 725
BseDI	CCNNGG	4 cut(s)	132, 241, 498, 593
BseGI	GGATG	8 cut(s)	111, 317, 428, 477, 507, 651, 829, 856
BseLI	CCNNNNNNNGG	4 cut(s)	198, 247, 401, 600
BseMI	GCAATG	1 cut(s)	756
BseMII	CTCAG	2 cut(s)	609, 654
BseNI	ACTGG	2 cut(s)	307, 588
BseRI	GAGGAG	6 cut(s)	37, 40, 245, 337, 628, 743
BseXI	GCAGC	3 cut(s)	366, 498, 910
BseYI	CCCAGC	1 cut(s)	772
BsgI	GTGCAG	1 cut(s)	365
Bsh1236I	CGCG	2 cut(s)	117, 238
BshFI	GGCC	4 cut(s)	103, 191, 339, 916
BshNI	GGYRCC	2 cut(s)	305, 941
BsiHKAI	GWGCWC	2 cut(s)	255, 477
BsiSI	CCGG	1 cut(s)	336
BslFI	GGGAC	2 cut(s)	729, 738
BslI	CCNNNNNNNGG	4 cut(s)	198, 247, 401, 600
BsmAI	GTCTC	3 cut(s)	227, 293, 672
BsmBI	CGTCTC	1 cut(s)	227
BsmFI	GGGAC	2 cut(s)	729, 738
BsnI	GGCC	4 cut(s)	103, 191, 339, 916
Bsp1286I	GDGCHC	2 cut(s)	255, 477
Bsp143I	GATC	6 cut(s)	214, 332, 732, 787, 858, 928
Bsp19I	CCATGG	1 cut(s)	132
BspACI	CCGC	5 cut(s)	16, 41, 115, 120, 655
BspANI	GGCC	4 cut(s)	103, 191, 339, 916
BspCNI	CTCAG	2 cut(s)	610, 653
BspFNI	CGCG	2 cut(s)	117, 238
BspLI	GGNNCC	7 cut(s)	192, 203, 307, 753, 754, 892, 943
BspMI	ACCTGC	1 cut(s)	564
BspPI	GGATC	2 cut(s)	327, 795
BspT107I	GGYRCC	2 cut(s)	305, 941
BsrDI	GCAATG	1 cut(s)	756
BsrI	ACTGG	2 cut(s)	307, 588
BssECI	CCNNGG	4 cut(s)	132, 241, 498, 593
BssMI	GATC	6 cut(s)	214, 332, 732, 787, 858, 928
BssT1I	CCWWGG	2 cut(s)	132, 241
Bst2UI	CCWGG	3 cut(s)	500, 595, 725
Bst4CI	ACNGT	1 cut(s)	386
Bst6I	CTCTTC	3 cut(s)	800, 813, 839
BstBAI	YACGTR	1 cut(s)	184
BstC8I	GCNNGC	1 cut(s)	154
BstDEI	CTNAG	2 cut(s)	618, 640
BstDSI	CCRYGG	1 cut(s)	132
BstF5I	GGATG	8 cut(s)	111, 317, 428, 477, 507, 651, 829, 856
BstFNI	CGCG	2 cut(s)	117, 238
BstH2I	RGCGCY	1 cut(s)	647
BstHHI	GCGC	3 cut(s)	119, 240, 646
BstKTI	GATC	6 cut(s)	217, 335, 735, 790, 861, 931
BstMAI	GTCTC	3 cut(s)	227, 293, 672
BstMBI	GATC	6 cut(s)	214, 332, 732, 787, 858, 928
BstMWI	GCNNNNNNNGC	1 cut(s)	388
BstNI	CCWGG	3 cut(s)	500, 595, 725
BstSCI	CCNGG	3 cut(s)	498, 593, 723
BstUI	CGCG	2 cut(s)	117, 238
BstV1I	GCAGC	3 cut(s)	366, 498, 910
BstV2I	GAAGAC	1 cut(s)	875
BstX2I	RGATCY	1 cut(s)	332
BstYI	RGATCY	1 cut(s)	332
BsuRI	GGCC	4 cut(s)	103, 191, 339, 916
BtgI	CCRYGG	1 cut(s)	132
BtsCI	GGATG	8 cut(s)	111, 317, 428, 477, 507, 651, 829, 856
BtsI	GCAGTG	1 cut(s)	664
BtsIMutI	CAGTG	2 cut(s)	382, 664
BveI	ACCTGC	1 cut(s)	564
Cac8I	GCNNGC	1 cut(s)	154
CaiI	CAGNNNCTG	1 cut(s)	704
CfoI	GCGC	3 cut(s)	119, 240, 646
Cfr13I	GGNCC	6 cut(s)	102, 190, 502, 752, 891, 914
CseI	GACGC	1 cut(s)	244
Csp6I	GTAC	2 cut(s)	264, 281
CviAII	CATG	4 cut(s)	133, 208, 314, 746
CviQI	GTAC	2 cut(s)	264, 281
DdeI	CTNAG	2 cut(s)	618, 640
DpnI	GATC	6 cut(s)	216, 334, 734, 789, 860, 930
DpnII	GATC	6 cut(s)	214, 332, 732, 787, 858, 928
Eam1104I	CTCTTC	3 cut(s)	800, 813, 839
EarI	CTCTTC	3 cut(s)	800, 813, 839
EciI	GGCGGA	1 cut(s)	5
Ecl136II	GAGCTC	2 cut(s)	253, 475
Eco130I	CCWWGG	2 cut(s)	132, 241
Eco24I	GRGCYC	2 cut(s)	255, 477
Eco47I	GGWCC	3 cut(s)	502, 752, 891
Eco47III	AGCGCT	1 cut(s)	645
Eco53kI	GAGCTC	2 cut(s)	253, 475
EcoICRI	GAGCTC	2 cut(s)	253, 475
EcoO109I	RGGNCCY	2 cut(s)	102, 752
EcoRII	CCWGG	3 cut(s)	498, 593, 723
EcoT14I	CCWWGG	2 cut(s)	132, 241
EcoT22I	ATGCAT	1 cut(s)	319
EcoT38I	GRGCYC	2 cut(s)	255, 477
ErhI	CCWWGG	2 cut(s)	132, 241
Esp3I	CGTCTC	1 cut(s)	227
FaeI	CATG	4 cut(s)	136, 211, 317, 749
FaiI	YATR	9 cut(s)	134, 209, 315, 365, 649, 737, 747, 960, 967
FaqI	GGGAC	2 cut(s)	729, 738
FatI	CATG	4 cut(s)	132, 207, 313, 745
FbaI	TGATCA	1 cut(s)	858
Fnu4HI	GCNGC	5 cut(s)	6, 120, 380, 487, 924
FokI	GGATG	8 cut(s)	98, 304, 415, 464, 494, 638, 836, 863
FriOI	GRGCYC	2 cut(s)	255, 477
Fsp4HI	GCNGC	5 cut(s)	6, 120, 380, 487, 924
FspBI	CTAG	1 cut(s)	903
GlaI	GCGC	3 cut(s)	118, 239, 645
GluI	GCNGC	5 cut(s)	6, 120, 380, 487, 924
GsaI	CCCAGC	1 cut(s)	776
GsuI	CTGGAG	1 cut(s)	746
HaeII	RGCGCY	1 cut(s)	647
HaeIII	GGCC	4 cut(s)	103, 191, 339, 916
HapII	CCGG	1 cut(s)	336
HgaI	GACGC	1 cut(s)	244
HhaI	GCGC	3 cut(s)	119, 240, 646
Hin1II	CATG	4 cut(s)	136, 211, 317, 749
Hin6I	GCGC	3 cut(s)	117, 238, 644
HinP1I	GCGC	3 cut(s)	117, 238, 644
HinfI	GANTC	1 cut(s)	31
HpaII	CCGG	1 cut(s)	336
HphI	GGTGA	1 cut(s)	69
Hpy166II	GTNNAC	1 cut(s)	168
Hpy188I	TCNGA	4 cut(s)	250, 332, 438, 690
Hpy188III	TCNNGA	4 cut(s)	275, 481, 572, 862
Hpy8I	GTNNAC	1 cut(s)	168
Hpy99I	CGWCG	1 cut(s)	281
HpyAV	CCTTC	1 cut(s)	90
HpyCH4III	ACNGT	1 cut(s)	386
HpyCH4IV	ACGT	2 cut(s)	183, 279
HpyCH4V	TGCA	6 cut(s)	111, 317, 382, 455, 559, 761
HpyF10VI	GCNNNNNNNGC	1 cut(s)	388
HpyF3I	CTNAG	2 cut(s)	618, 640
HpySE526I	ACGT	2 cut(s)	183, 279
Hsp92II	CATG	4 cut(s)	136, 211, 317, 749
HspAI	GCGC	3 cut(s)	117, 238, 644
KflI	GGGWCCC	1 cut(s)	752
Ksp22I	TGATCA	1 cut(s)	858
Kzo9I	GATC	6 cut(s)	214, 332, 732, 787, 858, 928
LmnI	GCTCC	3 cut(s)	250, 258, 404
Lsp1109I	GCAGC	3 cut(s)	366, 498, 910
LweI	GCATC	5 cut(s)	120, 131, 326, 442, 910
MaeI	CTAG	1 cut(s)	903
MaeII	ACGT	2 cut(s)	183, 279
MalI	GATC	6 cut(s)	216, 334, 734, 789, 860, 930
MboI	GATC	6 cut(s)	214, 332, 732, 787, 858, 928
MboII	GAAGA	7 cut(s)	4, 63, 66, 817, 830, 856, 880
MflI	RGATCY	1 cut(s)	332
MhlI	GDGCHC	2 cut(s)	255, 477
MluCI	AATT	3 cut(s)	460, 777, 895
MlyI	GAGTC	1 cut(s)	25
MmeI	TCCRAC	1 cut(s)	695
Mph1103I	ATGCAT	1 cut(s)	319
MseI	TTAA	1 cut(s)	948
MspI	CCGG	1 cut(s)	336
MspR9I	CCNGG	3 cut(s)	500, 595, 725
MvaI	CCWGG	3 cut(s)	500, 595, 725
MvnI	CGCG	2 cut(s)	117, 238
MwoI	GCNNNNNNNGC	1 cut(s)	388
NcoI	CCATGG	1 cut(s)	132
NdeII	GATC	6 cut(s)	214, 332, 732, 787, 858, 928
NlaIII	CATG	4 cut(s)	136, 211, 317, 749
NlaIV	GGNNCC	7 cut(s)	192, 203, 307, 753, 754, 892, 943
NsiI	ATGCAT	1 cut(s)	319
PflFI	GACNNNGTC	1 cut(s)	536
PflMI	CCANNNNNTGG	1 cut(s)	401
PkrI	GCNGC	5 cut(s)	7, 121, 381, 488, 925
PleI	GAGTC	1 cut(s)	25
PpsI	GAGTC	1 cut(s)	25
Ppu21I	YACGTR	1 cut(s)	184
PpuMI	RGGWCCY	1 cut(s)	752
Psp124BI	GAGCTC	2 cut(s)	255, 477
Psp5II	RGGWCCY	1 cut(s)	752
Psp6I	CCWGG	3 cut(s)	498, 593, 723
PspFI	CCCAGC	1 cut(s)	772
PspGI	CCWGG	3 cut(s)	498, 593, 723
PspN4I	GGNNCC	7 cut(s)	192, 203, 307, 753, 754, 892, 943
PspPI	GGNCC	6 cut(s)	102, 190, 502, 752, 891, 914
PspPPI	RGGWCCY	1 cut(s)	752
PstNI	CAGNNNCTG	1 cut(s)	704
PsuI	RGATCY	1 cut(s)	332
PsyI	GACNNNGTC	1 cut(s)	536
RsaI	GTAC	2 cut(s)	265, 282
RsaNI	GTAC	2 cut(s)	264, 281
SacI	GAGCTC	2 cut(s)	255, 477
SaqAI	TTAA	1 cut(s)	948
SatI	GCNGC	5 cut(s)	6, 120, 380, 487, 924
Sau3AI	GATC	6 cut(s)	214, 332, 732, 787, 858, 928
Sau96I	GGNCC	6 cut(s)	102, 190, 502, 752, 891, 914
SchI	GAGTC	1 cut(s)	25
ScrFI	CCNGG	3 cut(s)	500, 595, 725
SduI	GDGCHC	2 cut(s)	255, 477
SfaNI	GCATC	5 cut(s)	120, 131, 326, 442, 910
SinI	GGWCC	3 cut(s)	502, 752, 891
SmlI	CTYRAG	2 cut(s)	97, 470
SmoI	CTYRAG	2 cut(s)	97, 470
Sse9I	AATT	3 cut(s)	460, 777, 895
SsiI	CCGC	5 cut(s)	16, 41, 115, 120, 655
SspMI	CTAG	1 cut(s)	903
SstI	GAGCTC	2 cut(s)	255, 477
StyD4I	CCNGG	3 cut(s)	498, 593, 723
StyI	CCWWGG	2 cut(s)	132, 241
TaaI	ACNGT	1 cut(s)	386
TaiI	ACGT	2 cut(s)	186, 282
TaqI	TCGA	2 cut(s)	224, 931
TasI	AATT	3 cut(s)	460, 777, 895
TauI	GCSGC	1 cut(s)	122
Tru1I	TTAA	1 cut(s)	948
Tru9I	TTAA	1 cut(s)	948
TscAI	CASTG	2 cut(s)	389, 664
TseI	GCWGC	4 cut(s)	5, 379, 486, 923
TspDTI	ATGAA	2 cut(s)	72, 352
TspRI	CASTG	2 cut(s)	389, 664
Tth111I	GACNNNGTC	1 cut(s)	536
Van91I	CCANNNNNTGG	1 cut(s)	401
VpaK11BI	GGWCC	3 cut(s)	502, 752, 891
XapI	RAATTY	2 cut(s)	460, 777
XcmI	CCANNNNNNNNNTGG	1 cut(s)	299
XspI	CTAG	1 cut(s)	903
Zsp2I	ATGCAT	1 cut(s)	319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.