Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006480

Physical Location & Seq

Genomic Coordinates Reverse (-)

17059532 .. 17063026

Gene Structure 3495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G167200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1113 bp

ATGCCTTTGATATTGAAGTGGTCACTTTACAGTATATTTGGAACTTTTCATTTTCATTTTGACAACTTTGAACAGGGGATGGCAGTAGAGGAAGATGTTGAGTTGTCAACGTTGAAGTCTCAGCTGAGCCAAACACAGGAAATATGGAAGCAGGAGATGGAAGAGCGCCAATCCCAAGTGGATGTATTACAAAAAAAGCTTATGGAGGTAAAGGTTTGTATAGAGGGGTCTGAGGAAGATTCGAAAAAGGAACTAGAGGTTCTTTGGCGGAGAGTTAAAACTACCGCAACGCTGTTAACATACTTGAAATCAAAAGCAAGACTAATGGCTGTTCCTCATTTAGCGCATACATCGTGTGGCATCAAACAATTAGAAGGGGTGGGGTTTGTTGATAAAGATGGTACACCGTTATCTGGTTGGTCTAGGAATGTGGATCTTTCTTCCTTTGATAGTCCAGATGAAGACACATGGATTGGGATTAGTAAGCAACATGGTCCTCTGGATGAACAAGATGCAACTTATATTGGTGAACTACTTAAGTCTGTGCAGATGGTTACAGACGTAATGGAAGCTCTTGTCAAGAGAGTTGTACTGGCAGAATCCGAAACTGCAATTGAGAAGGAGAAGGTAACTGTTGGTGCGGAGGAACTTAAGAAAAAGTCAATCCAAATTGAGAATATGTCTTTGAAGTTAGAAGAGATGGAACGGTTTGCTCTAGGCACAAATGGTATTCTAACGGAAATGAAGCAGAGAGTTGAGGATTTGGTTGAAGAAACATATAGACAGCGGCAACGAGCTGCAGAAAATGAACAGGAGCTTTGTCGTGTGAAGCGGGACTTTGAGTCTCTAAAATCATATGTTAGCAGTCTCATCACTGTACGAGAAACACTGCTTTCATCAGAGAAGCAGTTCCAAACTATTGAAAAGCTGTTTGAGCGGCTAGTTGCAAAAACAACACAGTTAGAGGGTGAGAAAATCCAGAAAGAGACAGAAGTTCAGAAACTTATGGAAGAAAATGTGAAGCTGAGTGCTCTTCTTGACAAGAAAGAGGCCCAACTTCTGGCCATGAATGAACAATGCAAGGTGATGGCTTTGAGTGCTTCGAACATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

371

Amino Acids

42.38

Weight (kDa)

5.09

Isoelectric Point (pI)

42.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006480)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17990 AT2G17990 AT2G17990
fragaria_vesca	FvH4_1g11960 FvH4_1g11960
malus_domestica	MD02G1133400.v1.1 MD15G1246600.v1.1
prunus_persica	Prupe.7G167200_v2.0.a1 Prupe.7G167200_v2.0.a1
pyrus_communis	pycom02g10510 pycom02g10520 pycom15g21700
rosa_chinensis	RchiOBHm_Chr2g0099581
rosa_laevigata	RLG00000016893
rosa_multiflora	Rmu_co8434585.1_g000001 Rmu_sc0005120.1_g000004
rosa_roxburghii	Rroxscaffold_2G00142960
rosa_rugosa	Rorug02G0080800 Rorug02G0080900 Rorug02G0081000 Rorug02G0081100
rosa_samantha	Rh2AG130700 Rh2BG133800 Rh2CG134600 Rh2DG135000
rosa_wichuraiana	Rw2G010090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1060
AccBSI	CCGCTC	1 cut(s)	937
AciI	CCGC	6 cut(s)	268, 285, 641, 787, 832, 937
AclI	AACGTT	1 cut(s)	110
AclWI	GGATC	1 cut(s)	441
AcoI	YGGCCR	1 cut(s)	1062
AfaI	GTAC	3 cut(s)	403, 591, 879
AfiI	CCNNNNNNNGG	3 cut(s)	136, 413, 1060
AflII	CTTAAG	2 cut(s)	536, 650
AgsI	TTSAA	7 cut(s)	16, 71, 115, 307, 688, 770, 923
AhdI	GACNNNNNGTC	1 cut(s)	841
AluBI	AGCT	7 cut(s)	124, 199, 572, 797, 817, 928, 1024
AluI	AGCT	7 cut(s)	124, 199, 572, 797, 817, 928, 1024
Alw21I	GWGCWC	1 cut(s)	1033
Alw26I	GTCTC	4 cut(s)	123, 849, 872, 980
AlwI	GGATC	1 cut(s)	441
AoxI	GGCC	2 cut(s)	1050, 1062
ApeKI	GCWGC	1 cut(s)	797
Asp700I	GAANNNNTTC	1 cut(s)	908
AspLEI	GCGC	2 cut(s)	168, 346
AspS9I	GGNCC	2 cut(s)	494, 1051
AsuHPI	GGTGA	3 cut(s)	539, 980, 1096
AsuII	TTCGAA	2 cut(s)	242, 1103
AvaII	GGWCC	1 cut(s)	494
BalI	TGGCCA	1 cut(s)	1064
BbsI	GAAGAC	1 cut(s)	468
Bbv12I	GWGCWC	1 cut(s)	1033
BbvI	GCAGC	1 cut(s)	784
BccI	CCATC	6 cut(s)	73, 151, 392, 544, 694, 1081
BcoDI	GTCTC	4 cut(s)	123, 849, 872, 980
BfaI	CTAG	4 cut(s)	254, 423, 716, 941
BfmI	CTRYAG	1 cut(s)	798
BfoI	RGCGCY	1 cut(s)	169
BfrI	CTTAAG	2 cut(s)	536, 650
BisI	GCNGC	3 cut(s)	788, 798, 938
BlpI	GCTNAGC	1 cut(s)	125
BlsI	GCNGC	3 cut(s)	789, 799, 939
Bme18I	GGWCC	1 cut(s)	494
BmeRI	GACNNNNNGTC	1 cut(s)	841
BmgT120I	GGNCC	2 cut(s)	494, 1051
BmsI	GCATC	2 cut(s)	369, 502
BpiI	GAAGAC	1 cut(s)	468
Bpu1102I	GCTNAGC	1 cut(s)	125
Bpu14I	TTCGAA	2 cut(s)	242, 1103
Bsc4I	CCNNNNNNNGG	3 cut(s)	136, 413, 1060
Bse1I	ACTGG	1 cut(s)	597
BseGI	GGATG	3 cut(s)	84, 187, 508
BseLI	CCNNNNNNNGG	3 cut(s)	136, 413, 1060
BseMII	CTCAG	4 cut(s)	116, 134, 222, 1016
BseNI	ACTGG	1 cut(s)	597
BseXI	GCAGC	1 cut(s)	784
BsgI	GTGCAG	1 cut(s)	566
BshFI	GGCC	2 cut(s)	1052, 1064
BsiHKAI	GWGCWC	1 cut(s)	1033
BslFI	GGGAC	1 cut(s)	848
BslI	CCNNNNNNNGG	3 cut(s)	136, 413, 1060
BsmAI	GTCTC	4 cut(s)	123, 849, 872, 980
BsmFI	GGGAC	1 cut(s)	848
BsnI	GGCC	2 cut(s)	1052, 1064
Bsp119I	TTCGAA	2 cut(s)	242, 1103
Bsp1286I	GDGCHC	1 cut(s)	1033
Bsp143I	GATC	1 cut(s)	433
Bsp1720I	GCTNAGC	1 cut(s)	125
BspACI	CCGC	6 cut(s)	268, 285, 641, 787, 832, 937
BspANI	GGCC	2 cut(s)	1052, 1064
BspCNI	CTCAG	4 cut(s)	117, 133, 223, 1017
BspMAI	CTGCAG	1 cut(s)	802
BspPI	GGATC	1 cut(s)	441
BspQI	GCTCTTC	2 cut(s)	156, 1038
BspT104I	TTCGAA	2 cut(s)	242, 1103
BspTI	CTTAAG	2 cut(s)	536, 650
BsrBI	CCGCTC	1 cut(s)	937
BsrI	ACTGG	1 cut(s)	597
BssMI	GATC	1 cut(s)	433
Bst4CI	ACNGT	6 cut(s)	32, 408, 634, 708, 877, 960
Bst6I	CTCTTC	3 cut(s)	156, 690, 1038
BstAFI	CTTAAG	2 cut(s)	536, 650
BstBI	TTCGAA	2 cut(s)	242, 1103
BstDEI	CTNAG	4 cut(s)	120, 125, 231, 1025
BstF5I	GGATG	3 cut(s)	84, 187, 508
BstH2I	RGCGCY	1 cut(s)	169
BstHHI	GCGC	2 cut(s)	168, 346
BstKTI	GATC	1 cut(s)	436
BstMAI	GTCTC	4 cut(s)	123, 849, 872, 980
BstMBI	GATC	1 cut(s)	433
BstMWI	GCNNNNNNNGC	2 cut(s)	934, 1097
BstSFI	CTRYAG	1 cut(s)	798
BstV1I	GCAGC	1 cut(s)	784
BstV2I	GAAGAC	1 cut(s)	468
BstX2I	RGATCY	1 cut(s)	433
BstYI	RGATCY	1 cut(s)	433
BsuRI	GGCC	2 cut(s)	1052, 1064
BtsCI	GGATG	3 cut(s)	84, 187, 508
BtsI	GCAGTG	1 cut(s)	887
BtsIMutI	CAGTG	2 cut(s)	873, 887
CfoI	GCGC	2 cut(s)	168, 346
Cfr13I	GGNCC	2 cut(s)	494, 1051
Csp6I	GTAC	3 cut(s)	402, 590, 878
CviAII	CATG	3 cut(s)	468, 491, 1066
CviQI	GTAC	3 cut(s)	402, 590, 878
DdeI	CTNAG	4 cut(s)	120, 125, 231, 1025
DpnI	GATC	1 cut(s)	435
DpnII	GATC	1 cut(s)	433
DriI	GACNNNNNGTC	1 cut(s)	841
EaeI	YGGCCR	1 cut(s)	1062
Eam1104I	CTCTTC	3 cut(s)	156, 690, 1038
Eam1105I	GACNNNNNGTC	1 cut(s)	841
EarI	CTCTTC	3 cut(s)	156, 690, 1038
EciI	GGCGGA	1 cut(s)	283
Eco47I	GGWCC	1 cut(s)	494
FaeI	CATG	3 cut(s)	471, 494, 1069
FalI	AAGNNNNNCTT	2 cut(s)	821, 853
FaqI	GGGAC	1 cut(s)	848
FatI	CATG	3 cut(s)	467, 490, 1065
FauI	CCCGC	1 cut(s)	825
FauNDI	CATATG	1 cut(s)	856
Fnu4HI	GCNGC	3 cut(s)	788, 798, 938
FokI	GGATG	3 cut(s)	91, 194, 515
Fsp4HI	GCNGC	3 cut(s)	788, 798, 938
FspBI	CTAG	4 cut(s)	254, 423, 716, 941
GlaI	GCGC	2 cut(s)	167, 345
GluI	GCNGC	3 cut(s)	788, 798, 938
HaeII	RGCGCY	1 cut(s)	169
HaeIII	GGCC	2 cut(s)	1052, 1064
HhaI	GCGC	2 cut(s)	168, 346
Hin1II	CATG	3 cut(s)	471, 494, 1069
Hin6I	GCGC	2 cut(s)	166, 344
HinP1I	GCGC	2 cut(s)	166, 344
HincII	GTYRAC	2 cut(s)	108, 297
HindII	GTYRAC	2 cut(s)	108, 297
HindIII	AAGCTT	1 cut(s)	197
HinfI	GANTC	3 cut(s)	239, 599, 842
HpaI	GTTAAC	1 cut(s)	297
HphI	GGTGA	3 cut(s)	539, 980, 1096
Hpy166II	GTNNAC	4 cut(s)	108, 297, 404, 530
Hpy188I	TCNGA	4 cut(s)	232, 604, 901, 999
Hpy188III	TCNNGA	5 cut(s)	455, 500, 580, 979, 1037
Hpy8I	GTNNAC	4 cut(s)	108, 297, 404, 530
HpyAV	CCTTC	3 cut(s)	368, 613, 619
HpyCH4III	ACNGT	6 cut(s)	32, 408, 634, 708, 877, 960
HpyCH4IV	ACGT	2 cut(s)	110, 561
HpyCH4V	TGCA	6 cut(s)	515, 547, 611, 800, 947, 1080
HpyF10VI	GCNNNNNNNGC	2 cut(s)	934, 1097
HpyF3I	CTNAG	4 cut(s)	120, 125, 231, 1025
HpySE526I	ACGT	2 cut(s)	110, 561
Hsp92II	CATG	3 cut(s)	471, 494, 1069
HspAI	GCGC	2 cut(s)	166, 344
KspAI	GTTAAC	1 cut(s)	297
Kzo9I	GATC	1 cut(s)	433
LguI	GCTCTTC	2 cut(s)	156, 1038
LmnI	GCTCC	1 cut(s)	814
Lsp1109I	GCAGC	1 cut(s)	784
LweI	GCATC	2 cut(s)	369, 502
MaeI	CTAG	4 cut(s)	254, 423, 716, 941
MaeII	ACGT	2 cut(s)	110, 561
MaeIII	GTNAC	3 cut(s)	21, 553, 628
MalI	GATC	1 cut(s)	435
MbiI	CCGCTC	1 cut(s)	937
MboI	GATC	1 cut(s)	433
MboII	GAAGA	9 cut(s)	104, 173, 248, 432, 473, 707, 782, 1022, 1025
MfeI	CAATTG	1 cut(s)	612
MflI	RGATCY	1 cut(s)	433
MhlI	GDGCHC	1 cut(s)	1033
MlsI	TGGCCA	1 cut(s)	1064
MluCI	AATT	3 cut(s)	368, 612, 669
MluNI	TGGCCA	1 cut(s)	1064
MlyI	GAGTC	1 cut(s)	851
Mox20I	TGGCCA	1 cut(s)	1064
MroXI	GAANNNNTTC	1 cut(s)	908
MscI	TGGCCA	1 cut(s)	1064
MseI	TTAA	4 cut(s)	276, 296, 537, 651
Msp20I	TGGCCA	1 cut(s)	1064
MspA1I	CMGCKG	2 cut(s)	124, 787
MspCI	CTTAAG	2 cut(s)	536, 650
MunI	CAATTG	1 cut(s)	612
MwoI	GCNNNNNNNGC	2 cut(s)	934, 1097
NdeI	CATATG	1 cut(s)	856
NdeII	GATC	1 cut(s)	433
NlaIII	CATG	3 cut(s)	471, 494, 1069
NmuCI	GTSAC	1 cut(s)	21
NspV	TTCGAA	2 cut(s)	242, 1103
PciSI	GCTCTTC	2 cut(s)	156, 1038
PdmI	GAANNNNTTC	1 cut(s)	908
PfeI	GAWTC	2 cut(s)	239, 599
PflMI	CCANNNNNTGG	1 cut(s)	1060
PkrI	GCNGC	3 cut(s)	789, 799, 939
PleI	GAGTC	1 cut(s)	850
PpsI	GAGTC	1 cut(s)	850
Psp1406I	AACGTT	1 cut(s)	110
PspPI	GGNCC	2 cut(s)	494, 1051
PstI	CTGCAG	1 cut(s)	802
PsuI	RGATCY	1 cut(s)	433
PvuII	CAGCTG	1 cut(s)	124
RsaI	GTAC	3 cut(s)	403, 591, 879
RsaNI	GTAC	3 cut(s)	402, 590, 878
SapI	GCTCTTC	2 cut(s)	156, 1038
SaqAI	TTAA	4 cut(s)	276, 296, 537, 651
SatI	GCNGC	3 cut(s)	788, 798, 938
Sau3AI	GATC	1 cut(s)	433
Sau96I	GGNCC	2 cut(s)	494, 1051
SchI	GAGTC	1 cut(s)	851
SduI	GDGCHC	1 cut(s)	1033
SfaNI	GCATC	2 cut(s)	369, 502
SfcI	CTRYAG	1 cut(s)	798
SfuI	TTCGAA	2 cut(s)	242, 1103
SinI	GGWCC	1 cut(s)	494
SmlI	CTYRAG	2 cut(s)	536, 650
SmoI	CTYRAG	2 cut(s)	536, 650
Sse9I	AATT	3 cut(s)	368, 612, 669
SsiI	CCGC	6 cut(s)	268, 285, 641, 787, 832, 937
SspMI	CTAG	4 cut(s)	254, 423, 716, 941
TaaI	ACNGT	6 cut(s)	32, 408, 634, 708, 877, 960
TaiI	ACGT	2 cut(s)	113, 564
TaqI	TCGA	2 cut(s)	242, 1103
TasI	AATT	3 cut(s)	368, 612, 669
TatI	WGTACW	1 cut(s)	589
TauI	GCSGC	2 cut(s)	790, 940
TfiI	GAWTC	2 cut(s)	239, 599
Tru1I	TTAA	4 cut(s)	276, 296, 537, 651
Tru9I	TTAA	4 cut(s)	276, 296, 537, 651
TscAI	CASTG	2 cut(s)	880, 894
TseFI	GTSAC	1 cut(s)	21
TseI	GCWGC	1 cut(s)	797
Tsp45I	GTSAC	1 cut(s)	21
TspDTI	ATGAA	9 cut(s)	38, 44, 474, 519, 758, 822, 885, 1082, 1086
TspGWI	ACGGA	1 cut(s)	752
TspRI	CASTG	2 cut(s)	880, 894
Van91I	CCANNNNNTGG	1 cut(s)	1060
Vha464I	CTTAAG	2 cut(s)	536, 650
VpaK11BI	GGWCC	1 cut(s)	494
XmnI	GAANNNNTTC	1 cut(s)	908
XspI	CTAG	4 cut(s)	254, 423, 716, 941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.