Rw2G010090

chromatin organization

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0006480
Physical Location & Seq
Forward (+)
10204609 .. 10209959
5351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G010090.1

Sequence Viewer

Length: 1941 bp
ATGGCAGCCGGAGAAGAGGCTAACTTGTCAACCTTGAAGTCTCAACTGAGCCAAACACATGAAATGTGGAAGCTGGAGATGGAGCAGAGTCAGTCCCACGTGGATGTATTGCAAAAGAAGCTTATAGAGGTAGAGGCTTGTATAGAGGGGTCTGATGAAGACTCAAAAAAAGAATTAGAGGTTCTTTTGCGGAGAGTTAAGACGGCTGCCAGTTTGTTAACATACTTGAAATCAAAAGCAAGAATAATGGCTGTTCCTCATTTAGCCCATACAGCATGTGGCATCAAACAATCTGAAGGAGTGGGGCTTGTTGATAAAAATGGTACACCGTTGGCTGGATGGTCTCGGAATGTTGATCTTTCTTCCTTTGAAATTCCAGATGAAGATTCTTCAATTGGGATTGGCAAGCAACAGGACTCTCTAGATGAACAAGATGCAGCTTATATCAGTGAACTGCTTAAGTCTGTGCAGATGGTTACAGAAGTAATGGAAGCTCTAGTTAAGAGAGTTATATTGGCAGAATCTGAAACAGCAGTTGAGAAGGAGAAGGTAACTTTTGGTCAGGAAGAAATTAAGAAGAAGTCCATCCAAATTGAGAACATGTCTTTGAAGTTGGAGGAGATGGAGCGGTTTGCTCTAGGTACAAATGGTATTCTAAATGAAATGCGGCAAAGAGTTGAGGATTTGGTTCAAGAGACATCTATACAGAGGGAACGAGCCACAGAAAATGAACAGGAGCTTTGCCGGGTGAAGCGGGACTTTGAGTCTCTAAAATCGTATGTCAGCAGTCTCATCACTGTACGAGAAACATTGCTTTCGTCAGAGAAGCAGTTTCAAACTATAGAGAGGCTGTTTGAGCGGCTAGTTGCAAAAACAACACAGTTAGAGGGTGAGAAAACACAGAAAGAGGTGGAAGTTCAAAAACTTATGGAAGAGAATGTGAGGCTGAGTGCTCTTCTTGATAAGAAAGAAGCTCAACTTCATGCCATGAATGAACAATGCAAGGTGATGGCTTTGAGTTGCCCCCTGAACTTGTTATCTGGTTCTGCATTTATGCTGTTGTTGTTGGAAACTAAACCCAAAGATGGCATAAAGCTCGAATCTTTGCTGACAATGTCGGCGAGGAAAGTAGGTGAAGCTGAACCTCAGCCTGAGGACGGTGGCTCTGCGCAAGTTTCACAGTCCGTTCGAGCTTCCAAGTCTAGTGATGATAGTGACAAGAAGAGCACAGACAGGAAACTTAAGGATGTTGATATTTGTGTGCCGATAGTATATGGGACGATCGCGTTCTATCTCGGTAGAAAGGCCAGTGAGTCTCAGTCCCATAAGTGGACAGTTTATGTTCGTGGAGCTACGAACGAGGACCTTGGGGTGGTGGTGAAGCGTGTTGTCTTTCAATTGCATCCTAGTTTCAACAACCCTATGAGAGTGATTGAATCGCCCCCATTTGAGTTAACAGAATGTGGTTGGGGTGAATTTGAAATTGCCATCAGCCTGTTTTTCCACAATGATATCTGTGAGAAACAGTTGGACTTGTATCACCCTTTGAAGCTATATACTGAAGATGAATCAGGCCCCCAGTCGACCAAGAAACCTGTTGTTATGGAATCTTACAATGAAATAGTTTTTCCAGACCCTTCCGAGGCATTTTTTGCTCGTGTGCAAAACCATCCAGCTGTCATAGTTCCCCGTTTGCCTGCTGGGTTTAACTTGCCTAATCCTGTTATTAAAGATAACATGAATGAAAACAAACCCGGAGACACGAAGGATCATCCTCTTAGTCAGTGGTTCTTGAACTTTTCAGAGGCAGATGAACTCCTAAAACTTGCAGCAGCTCGCCAAGAGGTTCAAGCCCACATTGTTAACATGAGAAGAAAACTGAGCTTGATGGAAGGGGTGCCCCAGCTGTCCAAACCACCCTCTGGATTTGAATATGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000228 GO:0000785 GO:0000790 GO:0000812 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006325 GO:0006338 GO:0006342 GO:0006348 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0031248 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034728 GO:0035267 GO:0036211 GO:0040029 GO:0043044 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043486 GO:0043543 GO:0043933 GO:0043967 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070603 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097346 GO:1901360 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1902679 GO:1903506 GO:1903507 GO:1904949 GO:1990234 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YEATS

Protein Analysis

646

Amino Acids

72.63

Weight (kDa)

5.24

Isoelectric Point (pI)

45.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YEATS PF03366 440 - 519 2.6e-29 YEATS family
pYEATS PF20305 443 - 504 2e-10 prokaryotic YEATS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1170
AccB1I GGYRCC 1 cut(s) 1897
AccB7I CCANNNNNTGG 1 cut(s) 1922
AccBSI CCGCTC 2 cut(s) 628, 859
AccI GTMKAC 1 cut(s) 1583
AccII CGCG 1 cut(s) 1286
AciI CCGC 5 cut(s) 190, 628, 667, 754, 859
AclWI GGATC 1 cut(s) 1776
AcsI RAATTY 2 cut(s) 372, 1475
AcuI CTGAAG 2 cut(s) 315, 1581
AcvI CACGTG 1 cut(s) 100
AfaI GTAC 3 cut(s) 325, 643, 801
AfiI CCNNNNNNNGG 7 cut(s) 335, 1085, 1157, 1329, 1372, 1642, 1922
AflII CTTAAG 2 cut(s) 458, 1241
AflIII ACRYGT 1 cut(s) 600
AhdI GACNNNNNGTC 1 cut(s) 763
Alw21I GWGCWC 2 cut(s) 955, 1229
Alw26I GTCTC 7 cut(s) 45, 348, 689, 771, 794, 1320, 1752
AlwI GGATC 1 cut(s) 1776
AlwNI CAGNNNCTG 1 cut(s) 524
AoxI GGCC 2 cut(s) 1305, 1573
ApeKI GCWGC 5 cut(s) 5, 206, 437, 1829, 1832
ApoI RAATTY 2 cut(s) 372, 1475
AspLEI GCGC 1 cut(s) 1171
AspS9I GGNCC 2 cut(s) 1363, 1574
AsuC2I CCSGG 2 cut(s) 746, 1755
AsuHPI GGTGA 7 cut(s) 760, 902, 1018, 1145, 1390, 1484, 1532
AvaII GGWCC 1 cut(s) 1363
AxyI CCTNAGG 1 cut(s) 1152
BaeGI GKGCMC 1 cut(s) 1902
BanI GGYRCC 1 cut(s) 1897
BauI CACGAG 1 cut(s) 1656
BbrPI CACGTG 1 cut(s) 100
BbsI GAAGAC 1 cut(s) 165
Bbv12I GWGCWC 2 cut(s) 955, 1229
BbvCI CCTCAGC 1 cut(s) 1146
BbvI GCAGC 5 cut(s) 17, 193, 449, 1841, 1844
BceAI ACGGC 1 cut(s) 219
BcgI CGANNNNNNTGC 2 cut(s) 1078, 1112
BcnI CCSGG 2 cut(s) 746, 1755
BcoDI GTCTC 7 cut(s) 45, 348, 689, 771, 794, 1320, 1752
BfaI CTAG 6 cut(s) 422, 497, 638, 863, 1203, 1407
BfmI CTRYAG 1 cut(s) 840
BfrI CTTAAG 2 cut(s) 458, 1241
BisI GCNGC 7 cut(s) 6, 207, 438, 668, 860, 1830, 1833
BlsI GCNGC 7 cut(s) 7, 208, 439, 669, 861, 1831, 1834
Bme1390I CCNGG 2 cut(s) 746, 1755
Bme18I GGWCC 1 cut(s) 1363
BmeRI GACNNNNNGTC 1 cut(s) 763
BmgT120I GGNCC 2 cut(s) 1363, 1574
BmiI GGNNCC 2 cut(s) 1576, 1899
BmrFI CCNGG 2 cut(s) 746, 1755
BmrI ACTGGG 1 cut(s) 1573
BmsI GCATC 3 cut(s) 291, 424, 1411
BmuI ACTGGG 1 cut(s) 1573
BpiI GAAGAC 1 cut(s) 165
BpmI CTGGAG 1 cut(s) 95
Bpu10I CCTNAGC 1 cut(s) 1146
BpuMI CCSGG 2 cut(s) 746, 1755
BsaAI YACGTR 1 cut(s) 100
BsaI GGTCTC 1 cut(s) 348
BsaJI CCNNGG 2 cut(s) 1366, 1641
Bsc4I CCNNNNNNNGG 7 cut(s) 335, 1085, 1157, 1329, 1372, 1642, 1922
Bse1I ACTGG 3 cut(s) 210, 1308, 1579
Bse21I CCTNAGG 1 cut(s) 1152
Bse3DI GCAATG 1 cut(s) 809
BseDI CCNNGG 2 cut(s) 1366, 1641
BseGI GGATG 7 cut(s) 109, 344, 585, 1252, 1402, 1669, 1771
BseLI CCNNNNNNNGG 7 cut(s) 335, 1085, 1157, 1329, 1372, 1642, 1922
BseMI GCAATG 1 cut(s) 809
BseMII CTCAG 6 cut(s) 38, 938, 1143, 1160, 1331, 1871
BseNI ACTGG 3 cut(s) 210, 1308, 1579
BseRI GAGGAG 1 cut(s) 632
BseSI GKGCMC 1 cut(s) 1902
BseXI GCAGC 5 cut(s) 17, 193, 449, 1841, 1844
BseYI CCCAGC 2 cut(s) 1700, 1902
BsgI GTGCAG 1 cut(s) 488
Bsh1236I CGCG 1 cut(s) 1286
Bsh1285I CGRYCG 1 cut(s) 1284
BshFI GGCC 2 cut(s) 1307, 1575
BshNI GGYRCC 1 cut(s) 1897
BsiEI CGRYCG 1 cut(s) 1284
BsiHKAI GWGCWC 2 cut(s) 955, 1229
BsiSI CCGG 3 cut(s) 9, 745, 1755
BslFI GGGAC 4 cut(s) 79, 770, 1291, 1306
BslI CCNNNNNNNGG 7 cut(s) 335, 1085, 1157, 1329, 1372, 1642, 1922
BsmAI GTCTC 7 cut(s) 45, 348, 689, 771, 794, 1320, 1752
BsmFI GGGAC 4 cut(s) 79, 770, 1291, 1306
BsnI GGCC 2 cut(s) 1307, 1575
Bso31I GGTCTC 1 cut(s) 348
Bsp1286I GDGCHC 3 cut(s) 955, 1229, 1902
Bsp143I GATC 3 cut(s) 355, 1281, 1768
BspACI CCGC 5 cut(s) 190, 628, 667, 754, 859
BspANI GGCC 2 cut(s) 1307, 1575
BspCNI CTCAG 6 cut(s) 39, 939, 1144, 1159, 1330, 1872
BspFNI CGCG 1 cut(s) 1286
BspLI GGNNCC 2 cut(s) 1576, 1899
BspPI GGATC 1 cut(s) 1776
BspQI GCTCTTC 2 cut(s) 960, 1217
BspT107I GGYRCC 1 cut(s) 1897
BspTI CTTAAG 2 cut(s) 458, 1241
BspTNI GGTCTC 1 cut(s) 348
BsrBI CCGCTC 2 cut(s) 628, 859
BsrDI GCAATG 1 cut(s) 809
BsrI ACTGG 3 cut(s) 210, 1308, 1579
BssECI CCNNGG 2 cut(s) 1366, 1641
BssMI GATC 3 cut(s) 355, 1281, 1768
BssSI CACGAG 1 cut(s) 1656
BssT1I CCWWGG 1 cut(s) 1366
Bst2BI CACGAG 1 cut(s) 1656
Bst4CI ACNGT 7 cut(s) 330, 799, 882, 1160, 1182, 1336, 1527
Bst6I CTCTTC 4 cut(s) 9, 927, 960, 1217
BstAFI CTTAAG 2 cut(s) 458, 1241
BstAPI GCANNNNNTGC 1 cut(s) 1652
BstBAI YACGTR 1 cut(s) 100
BstC8I GCNNGC 3 cut(s) 407, 1698, 1837
BstDEI CTNAG 7 cut(s) 47, 947, 1146, 1152, 1317, 1778, 1880
BstF5I GGATG 7 cut(s) 109, 344, 585, 1252, 1402, 1669, 1771
BstFNI CGCG 1 cut(s) 1286
BstHHI GCGC 1 cut(s) 1171
BstKTI GATC 3 cut(s) 358, 1284, 1771
BstMAI GTCTC 7 cut(s) 45, 348, 689, 771, 794, 1320, 1752
BstMBI GATC 3 cut(s) 355, 1281, 1768
BstMCI CGRYCG 1 cut(s) 1284
BstMWI GCNNNNNNNGC 4 cut(s) 118, 272, 856, 1652
BstNSI RCATGY 2 cut(s) 279, 604
BstSCI CCNGG 2 cut(s) 744, 1753
BstSFI CTRYAG 1 cut(s) 840
BstSLI GKGCMC 1 cut(s) 1902
BstUI CGCG 1 cut(s) 1286
BstV1I GCAGC 5 cut(s) 17, 193, 449, 1841, 1844
BstV2I GAAGAC 1 cut(s) 165
Bsu36I CCTNAGG 1 cut(s) 1152
BsuRI GGCC 2 cut(s) 1307, 1575
BtsCI GGATG 7 cut(s) 109, 344, 585, 1252, 1402, 1669, 1771
BtsIMutI CAGTG 4 cut(s) 454, 795, 1315, 1790
Cac8I GCNNGC 3 cut(s) 407, 1698, 1837
CaiI CAGNNNCTG 1 cut(s) 524
CfoI GCGC 1 cut(s) 1171
Cfr13I GGNCC 2 cut(s) 1363, 1574
Csp6I GTAC 3 cut(s) 324, 642, 800
CviAII CATG 8 cut(s) 59, 276, 601, 983, 988, 1738, 1867, 1938
CviQI GTAC 3 cut(s) 324, 642, 800
DdeI CTNAG 7 cut(s) 47, 947, 1146, 1152, 1317, 1778, 1880
DpnI GATC 3 cut(s) 357, 1283, 1770
DpnII GATC 3 cut(s) 355, 1281, 1768
DriI GACNNNNNGTC 1 cut(s) 763
Eam1104I CTCTTC 4 cut(s) 9, 927, 960, 1217
Eam1105I GACNNNNNGTC 1 cut(s) 763
EarI CTCTTC 4 cut(s) 9, 927, 960, 1217
Eco130I CCWWGG 1 cut(s) 1366
Eco31I GGTCTC 1 cut(s) 348
Eco32I GATATC 1 cut(s) 1513
Eco47I GGWCC 1 cut(s) 1363
Eco57I CTGAAG 2 cut(s) 315, 1581
Eco72I CACGTG 1 cut(s) 100
Eco81I CCTNAGG 1 cut(s) 1152
EcoO109I RGGNCCY 2 cut(s) 1363, 1574
EcoRV GATATC 1 cut(s) 1513
EcoT14I CCWWGG 1 cut(s) 1366
EcoT22I ATGCAT 1 cut(s) 1939
ErhI CCWWGG 1 cut(s) 1366
FaeI CATG 8 cut(s) 62, 279, 604, 986, 991, 1741, 1870, 1941
FalI AAGNNNNNCTT 4 cut(s) 743, 775, 963, 995
FaqI GGGAC 4 cut(s) 79, 770, 1291, 1306
FatI CATG 8 cut(s) 58, 275, 600, 982, 987, 1737, 1866, 1937
FauI CCCGC 1 cut(s) 747
FblI GTMKAC 1 cut(s) 1583
Fnu4HI GCNGC 7 cut(s) 6, 207, 438, 668, 860, 1830, 1833
FokI GGATG 7 cut(s) 116, 351, 572, 1259, 1389, 1656, 1758
Fsp4HI GCNGC 7 cut(s) 6, 207, 438, 668, 860, 1830, 1833
FspBI CTAG 6 cut(s) 422, 497, 638, 863, 1203, 1407
FspI TGCGCA 1 cut(s) 1170
GlaI GCGC 1 cut(s) 1170
GluI GCNGC 7 cut(s) 6, 207, 438, 668, 860, 1830, 1833
GsaI CCCAGC 2 cut(s) 1704, 1906
GsuI CTGGAG 1 cut(s) 95
HaeIII GGCC 2 cut(s) 1307, 1575
HapII CCGG 3 cut(s) 9, 745, 1755
HhaI GCGC 1 cut(s) 1171
Hin1II CATG 8 cut(s) 62, 279, 604, 986, 991, 1741, 1870, 1941
Hin6I GCGC 1 cut(s) 1169
HinP1I GCGC 1 cut(s) 1169
HincII GTYRAC 5 cut(s) 30, 219, 1455, 1584, 1864
HindII GTYRAC 5 cut(s) 30, 219, 1455, 1584, 1864
HindIII AAGCTT 1 cut(s) 119
HpaI GTTAAC 3 cut(s) 219, 1455, 1864
HpaII CCGG 3 cut(s) 9, 745, 1755
HphI GGTGA 7 cut(s) 760, 902, 1018, 1145, 1390, 1484, 1532
Hpy166II GTNNAC 8 cut(s) 30, 219, 326, 452, 1332, 1455, 1584, 1864
Hpy188I TCNGA 7 cut(s) 154, 295, 348, 526, 823, 1642, 1804
Hpy188III TCNNGA 8 cut(s) 377, 422, 563, 692, 959, 1631, 1792, 1923
Hpy8I GTNNAC 8 cut(s) 30, 219, 326, 452, 1332, 1455, 1584, 1864
HpyAV CCTTC 6 cut(s) 290, 535, 541, 1647, 1759, 1886
HpyCH4III ACNGT 7 cut(s) 330, 799, 882, 1160, 1182, 1336, 1527
HpyCH4IV ACGT 1 cut(s) 99
HpyF10VI GCNNNNNNNGC 4 cut(s) 118, 272, 856, 1652
HpyF3I CTNAG 7 cut(s) 47, 947, 1146, 1152, 1317, 1778, 1880
HpySE526I ACGT 1 cut(s) 99
Hsp92II CATG 8 cut(s) 62, 279, 604, 986, 991, 1741, 1870, 1941
HspAI GCGC 1 cut(s) 1169
KspAI GTTAAC 3 cut(s) 219, 1455, 1864
Kzo9I GATC 3 cut(s) 355, 1281, 1768
LguI GCTCTTC 2 cut(s) 960, 1217
LmnI GCTCC 4 cut(s) 82, 625, 736, 1349
Lsp1109I GCAGC 5 cut(s) 17, 193, 449, 1841, 1844
LweI GCATC 3 cut(s) 291, 424, 1411
MaeI CTAG 6 cut(s) 422, 497, 638, 863, 1203, 1407
MaeII ACGT 1 cut(s) 99
MaeIII GTNAC 3 cut(s) 475, 550, 1214
MalI GATC 3 cut(s) 357, 1283, 1770
MbiI CCGCTC 2 cut(s) 628, 859
MboI GATC 3 cut(s) 355, 1281, 1768
MfeI CAATTG 2 cut(s) 393, 1397
MhlI GDGCHC 3 cut(s) 955, 1229, 1902
MluCI AATT 8 cut(s) 173, 372, 393, 570, 591, 1397, 1475, 1482
MlyI GAGTC 5 cut(s) 97, 155, 410, 773, 1322
MmeI TCCRAC 3 cut(s) 594, 1047, 1509
Mph1103I ATGCAT 1 cut(s) 1939
MslI CAYNNNNRTG 1 cut(s) 102
MspA1I CMGCKG 2 cut(s) 1676, 1906
MspCI CTTAAG 2 cut(s) 458, 1241
MspI CCGG 3 cut(s) 9, 745, 1755
MspR9I CCNGG 2 cut(s) 746, 1755
MunI CAATTG 2 cut(s) 393, 1397
MvnI CGCG 1 cut(s) 1286
MwoI GCNNNNNNNGC 4 cut(s) 118, 272, 856, 1652
NciI CCSGG 2 cut(s) 746, 1755
NdeII GATC 3 cut(s) 355, 1281, 1768
NlaIII CATG 8 cut(s) 62, 279, 604, 986, 991, 1741, 1870, 1941
NlaIV GGNNCC 2 cut(s) 1576, 1899
NmuCI GTSAC 1 cut(s) 1214
NsbI TGCGCA 1 cut(s) 1170
NsiI ATGCAT 1 cut(s) 1939
NspI RCATGY 2 cut(s) 279, 604
PciI ACATGT 1 cut(s) 600
PciSI GCTCTTC 2 cut(s) 960, 1217
PfeI GAWTC 6 cut(s) 386, 521, 1100, 1436, 1568, 1607
PflFI GACNNNGTC 1 cut(s) 1114
PflMI CCANNNNNTGG 1 cut(s) 1922
PkrI GCNGC 7 cut(s) 7, 208, 439, 669, 861, 1831, 1834
Ple19I CGATCG 1 cut(s) 1284
PleI GAGTC 5 cut(s) 96, 155, 410, 772, 1321
PmaCI CACGTG 1 cut(s) 100
PmlI CACGTG 1 cut(s) 100
PpsI GAGTC 5 cut(s) 96, 155, 410, 772, 1321
Ppu21I YACGTR 1 cut(s) 100
PpuMI RGGWCCY 1 cut(s) 1363
PscI ACATGT 1 cut(s) 600
Psp5II RGGWCCY 1 cut(s) 1363
PspCI CACGTG 1 cut(s) 100
PspFI CCCAGC 2 cut(s) 1700, 1902
PspN4I GGNNCC 2 cut(s) 1576, 1899
PspPI GGNCC 2 cut(s) 1363, 1574
PspPPI RGGWCCY 1 cut(s) 1363
PstNI CAGNNNCTG 1 cut(s) 524
PsyI GACNNNGTC 1 cut(s) 1114
PvuI CGATCG 1 cut(s) 1284
PvuII CAGCTG 2 cut(s) 1676, 1906
RsaI GTAC 3 cut(s) 325, 643, 801
RsaNI GTAC 3 cut(s) 324, 642, 800
RseI CAYNNNNRTG 1 cut(s) 102
SalI GTCGAC 1 cut(s) 1582
SapI GCTCTTC 2 cut(s) 960, 1217
SatI GCNGC 7 cut(s) 6, 207, 438, 668, 860, 1830, 1833
Sau3AI GATC 3 cut(s) 355, 1281, 1768
Sau96I GGNCC 2 cut(s) 1363, 1574
SchI GAGTC 5 cut(s) 97, 155, 410, 773, 1322
ScrFI CCNGG 2 cut(s) 746, 1755
SduI GDGCHC 3 cut(s) 955, 1229, 1902
SfaNI GCATC 3 cut(s) 291, 424, 1411
SfcI CTRYAG 1 cut(s) 840
SinI GGWCC 1 cut(s) 1363
SmiMI CAYNNNNRTG 1 cut(s) 102
SmlI CTYRAG 2 cut(s) 458, 1241
SmoI CTYRAG 2 cut(s) 458, 1241
Sse9I AATT 8 cut(s) 173, 372, 393, 570, 591, 1397, 1475, 1482
SsiI CCGC 5 cut(s) 190, 628, 667, 754, 859
SspMI CTAG 6 cut(s) 422, 497, 638, 863, 1203, 1407
StyD4I CCNGG 2 cut(s) 744, 1753
StyI CCWWGG 1 cut(s) 1366
TaaI ACNGT 7 cut(s) 330, 799, 882, 1160, 1182, 1336, 1527
TaiI ACGT 1 cut(s) 102
TaqI TCGA 3 cut(s) 1098, 1189, 1583
TasI AATT 8 cut(s) 173, 372, 393, 570, 591, 1397, 1475, 1482
TauI GCSGC 2 cut(s) 670, 862
TfiI GAWTC 6 cut(s) 386, 521, 1100, 1436, 1568, 1607
TscAI CASTG 4 cut(s) 454, 802, 1315, 1790
TseFI GTSAC 1 cut(s) 1214
TseI GCWGC 5 cut(s) 5, 206, 437, 1829, 1832
Tsp45I GTSAC 1 cut(s) 1214
TspGWI ACGGA 1 cut(s) 1174
TspRI CASTG 4 cut(s) 454, 802, 1315, 1790
Tth111I GACNNNGTC 1 cut(s) 1114
Van91I CCANNNNNTGG 1 cut(s) 1922
Vha464I CTTAAG 2 cut(s) 458, 1241
VpaK11BI GGWCC 1 cut(s) 1363
XapI RAATTY 2 cut(s) 372, 1475
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 2 cut(s) 279, 604
XcmI CCANNNNNNNNNTGG 1 cut(s) 275
XmiI GTMKAC 1 cut(s) 1583
XspI CTAG 6 cut(s) 422, 497, 638, 863, 1203, 1407
Zsp2I ATGCAT 1 cut(s) 1939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.