Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008592

Physical Location & Seq

Genomic Coordinates Forward (+)

17467869 .. 17469124

Gene Structure 1256 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G175300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 603 bp

ATGGAGAAACAATCAGGACTTATTGGGAGCAGAATTCTGAAGCTTTTATCAAAAGCTGCACAGCCTGCCGTCACATACCACAGCCCACCGCCCAGCCCTAGAAAAACCTCAGGTCCAATGATATCACTCATTCCCTCTGAGGCCAGAAGGAAGCCCAGGAATGGAATTACCTTTGGTCCAAAAGAACCCACTTCTCCAAAAGTCTCATGCATGGGCCAAATCAAGGGCAAGCAGAAGAAGAAGAAGAAGAAGAACCAAAGCAAAAGCAAGTCAAATACTAGCAAGGGGGCTTGCCCTCCACCACAAGAAAGCACCACCTGCAATCTAGTTTCATGTGTTCCTAAAGAGGTGAAGAAAAAGACATCAAAGGGTTTGCCCAAGGAAGCCCCACCAAAAGAAGGTGATAAAAATGACAATAATCACCCTGATGGTTTGGTGGGCGGTTCATCTAGAGGTCCAGAAAGAGCGCCTTCTTTGGGACAGATGAGGAGGTTTGCAAGTGGTCGTGGTGTGCTGGCGGATTTTGATTTGATATTGGAGGTTCATGATGATCAATTGGGTGATGTGAAAAATAGGGTGGGTGGGGATAGTCAAGGAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

201

Amino Acids

21.39

Weight (kDa)

10.01

Isoelectric Point (pI)

54.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20310 AT1G76070
fragaria_vesca	FvH4_1g11060 FvH4_2g37950
prunus_persica	Prupe.1G359400_v2.0.a1 Prupe.7G175300_v2.0.a1
pyrus_communis	pycom08g00620
rosa_chinensis	RchiOBHm_Chr6g0303671
rosa_laevigata	RLG00000011062 RLG00000016789
rosa_multiflora	Rmu_sc0013443.1_g000004 Rmu_ssc0000114.1_g000014
rosa_roxburghii	Rroxscaffold_2G00144080
rosa_rugosa	Rorug02G0071900 Rorug06G0323700
rosa_samantha	Rh2BG122000 Rh2CG123600 Rh2DG123600 Rh6AG437900 Rh6BG465200 Rh6CG450000 Rh6DG436800
rosa_wichuraiana	Rw6G037910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	326
Acc36I	ACCTGC	1 cut(s)	326
AciI	CCGC	3 cut(s)	89, 441, 518
AcsI	RAATTY	1 cut(s)	33
AcuI	CTGAAG	1 cut(s)	59
AfiI	CCNNNNNNNGG	4 cut(s)	161, 223, 398, 476
AjnI	CCWGG	1 cut(s)	155
AluBI	AGCT	2 cut(s)	43, 56
AluI	AGCT	2 cut(s)	43, 56
Alw26I	GTCTC	1 cut(s)	208
AoxI	GGCC	2 cut(s)	141, 214
ApeKI	GCWGC	1 cut(s)	56
ApoI	RAATTY	1 cut(s)	33
AspLEI	GCGC	1 cut(s)	469
AspS9I	GGNCC	4 cut(s)	113, 176, 214, 455
AsuHPI	GGTGA	4 cut(s)	361, 413, 413, 572
AvaII	GGWCC	3 cut(s)	113, 176, 455
AxyI	CCTNAGG	1 cut(s)	109
BbvI	GCAGC	1 cut(s)	43
BccI	CCATC	1 cut(s)	422
BceAI	ACGGC	1 cut(s)	53
BciT130I	CCWGG	1 cut(s)	157
BclI	TGATCA	1 cut(s)	550
BcoDI	GTCTC	1 cut(s)	208
BfaI	CTAG	4 cut(s)	99, 279, 326, 450
BfoI	RGCGCY	1 cut(s)	470
BfuAI	ACCTGC	1 cut(s)	326
BisI	GCNGC	1 cut(s)	57
BlsI	GCNGC	1 cut(s)	58
Bme1390I	CCNGG	1 cut(s)	157
Bme18I	GGWCC	3 cut(s)	113, 176, 455
BmgT120I	GGNCC	4 cut(s)	113, 176, 214, 455
BmrFI	CCNGG	1 cut(s)	157
BsaJI	CCNNGG	2 cut(s)	155, 378
Bsc4I	CCNNNNNNNGG	4 cut(s)	161, 223, 398, 476
Bse21I	CCTNAGG	1 cut(s)	109
BseBI	CCWGG	1 cut(s)	157
BseDI	CCNNGG	2 cut(s)	155, 378
BseLI	CCNNNNNNNGG	4 cut(s)	161, 223, 398, 476
BseMII	CTCAG	2 cut(s)	123, 129
BseRI	GAGGAG	1 cut(s)	502
BseXI	GCAGC	1 cut(s)	43
BseYI	CCCAGC	1 cut(s)	92
BsgI	GTGCAG	1 cut(s)	42
BshFI	GGCC	2 cut(s)	143, 216
BslFI	GGGAC	1 cut(s)	492
BslI	CCNNNNNNNGG	4 cut(s)	161, 223, 398, 476
BsmAI	GTCTC	1 cut(s)	208
BsmFI	GGGAC	1 cut(s)	492
BsnI	GGCC	2 cut(s)	143, 216
Bsp143I	GATC	1 cut(s)	550
BspACI	CCGC	3 cut(s)	89, 441, 518
BspANI	GGCC	2 cut(s)	143, 216
BspCNI	CTCAG	2 cut(s)	122, 130
BspHI	TCATGA	1 cut(s)	544
BspMI	ACCTGC	1 cut(s)	326
BssECI	CCNNGG	2 cut(s)	155, 378
BssMI	GATC	1 cut(s)	550
BssT1I	CCWWGG	1 cut(s)	378
Bst2UI	CCWGG	1 cut(s)	157
BstAPI	GCANNNNNTGC	2 cut(s)	65, 318
BstC8I	GCNNGC	4 cut(s)	66, 230, 292, 516
BstDEI	CTNAG	2 cut(s)	109, 138
BstH2I	RGCGCY	1 cut(s)	470
BstHHI	GCGC	1 cut(s)	469
BstKTI	GATC	1 cut(s)	553
BstMAI	GTCTC	1 cut(s)	208
BstMBI	GATC	1 cut(s)	550
BstMWI	GCNNNNNNNGC	2 cut(s)	65, 318
BstNI	CCWGG	1 cut(s)	157
BstSCI	CCNGG	1 cut(s)	155
BstV1I	GCAGC	1 cut(s)	43
Bsu36I	CCTNAGG	1 cut(s)	109
BsuRI	GGCC	2 cut(s)	143, 216
BveI	ACCTGC	1 cut(s)	326
Cac8I	GCNNGC	4 cut(s)	66, 230, 292, 516
CciI	TCATGA	1 cut(s)	544
CfoI	GCGC	1 cut(s)	469
Cfr13I	GGNCC	4 cut(s)	113, 176, 214, 455
CviAII	CATG	4 cut(s)	207, 211, 333, 545
DdeI	CTNAG	2 cut(s)	109, 138
DpnI	GATC	1 cut(s)	552
DpnII	GATC	1 cut(s)	550
EciI	GGCGGA	1 cut(s)	533
Eco130I	CCWWGG	1 cut(s)	378
Eco32I	GATATC	1 cut(s)	123
Eco47I	GGWCC	3 cut(s)	113, 176, 455
Eco57I	CTGAAG	1 cut(s)	59
Eco81I	CCTNAGG	1 cut(s)	109
EcoRI	GAATTC	1 cut(s)	33
EcoRII	CCWGG	1 cut(s)	155
EcoRV	GATATC	1 cut(s)	123
EcoT14I	CCWWGG	1 cut(s)	378
EcoT22I	ATGCAT	1 cut(s)	212
ErhI	CCWWGG	1 cut(s)	378
FaeI	CATG	4 cut(s)	210, 214, 336, 548
FaiI	YATR	5 cut(s)	76, 208, 212, 334, 546
FalI	AAGNNNNNCTT	2 cut(s)	454, 486
FaqI	GGGAC	1 cut(s)	492
FatI	CATG	4 cut(s)	206, 210, 332, 544
FbaI	TGATCA	1 cut(s)	550
Fnu4HI	GCNGC	1 cut(s)	57
Fsp4HI	GCNGC	1 cut(s)	57
FspBI	CTAG	4 cut(s)	99, 279, 326, 450
GlaI	GCGC	1 cut(s)	468
GluI	GCNGC	1 cut(s)	57
GsaI	CCCAGC	1 cut(s)	96
HaeII	RGCGCY	1 cut(s)	470
HaeIII	GGCC	2 cut(s)	143, 216
HhaI	GCGC	1 cut(s)	469
Hin1II	CATG	4 cut(s)	210, 214, 336, 548
Hin6I	GCGC	1 cut(s)	467
HinP1I	GCGC	1 cut(s)	467
HindIII	AAGCTT	1 cut(s)	41
HphI	GGTGA	4 cut(s)	361, 413, 413, 572
Hpy188I	TCNGA	2 cut(s)	39, 139
Hpy188III	TCNNGA	4 cut(s)	15, 450, 458, 545
HpyAV	CCTTC	3 cut(s)	141, 392, 480
HpyCH4V	TGCA	4 cut(s)	59, 210, 321, 497
HpyF10VI	GCNNNNNNNGC	2 cut(s)	65, 318
HpyF3I	CTNAG	2 cut(s)	109, 138
Hsp92II	CATG	4 cut(s)	210, 214, 336, 548
HspAI	GCGC	1 cut(s)	467
Ksp22I	TGATCA	1 cut(s)	550
Kzo9I	GATC	1 cut(s)	550
LmnI	GCTCC	1 cut(s)	27
Lsp1109I	GCAGC	1 cut(s)	43
MaeI	CTAG	4 cut(s)	99, 279, 326, 450
MaeIII	GTNAC	1 cut(s)	70
MalI	GATC	1 cut(s)	552
MboI	GATC	1 cut(s)	550
MboII	GAAGA	7 cut(s)	247, 250, 253, 256, 259, 262, 364
MfeI	CAATTG	1 cut(s)	554
MluCI	AATT	3 cut(s)	33, 165, 554
MnlI	CCTC	9 cut(s)	118, 133, 145, 306, 340, 446, 480, 483, 532
Mph1103I	ATGCAT	1 cut(s)	212
MslI	CAYNNNNRTG	1 cut(s)	426
MspR9I	CCNGG	1 cut(s)	157
MunI	CAATTG	1 cut(s)	554
MvaI	CCWGG	1 cut(s)	157
MwoI	GCNNNNNNNGC	2 cut(s)	65, 318
NdeII	GATC	1 cut(s)	550
NlaIII	CATG	4 cut(s)	210, 214, 336, 548
NmuCI	GTSAC	1 cut(s)	70
NsiI	ATGCAT	1 cut(s)	212
PagI	TCATGA	1 cut(s)	544
PaqCI	CACCTGC	1 cut(s)	326
PkrI	GCNGC	1 cut(s)	58
Psp6I	CCWGG	1 cut(s)	155
PspFI	CCCAGC	1 cut(s)	92
PspGI	CCWGG	1 cut(s)	155
PspPI	GGNCC	4 cut(s)	113, 176, 214, 455
RseI	CAYNNNNRTG	1 cut(s)	426
SatI	GCNGC	1 cut(s)	57
Sau3AI	GATC	1 cut(s)	550
Sau96I	GGNCC	4 cut(s)	113, 176, 214, 455
ScrFI	CCNGG	1 cut(s)	157
SinI	GGWCC	3 cut(s)	113, 176, 455
SmiMI	CAYNNNNRTG	1 cut(s)	426
Sse9I	AATT	3 cut(s)	33, 165, 554
SsiI	CCGC	3 cut(s)	89, 441, 518
SspMI	CTAG	4 cut(s)	99, 279, 326, 450
StyD4I	CCNGG	1 cut(s)	155
StyI	CCWWGG	1 cut(s)	378
TasI	AATT	3 cut(s)	33, 165, 554
TseFI	GTSAC	1 cut(s)	70
TseI	GCWGC	1 cut(s)	56
Tsp45I	GTSAC	1 cut(s)	70
TspDTI	ATGAA	3 cut(s)	321, 435, 533
VpaK11BI	GGWCC	3 cut(s)	113, 176, 455
XapI	RAATTY	1 cut(s)	33
XbaI	TCTAGA	1 cut(s)	449
XspI	CTAG	4 cut(s)	99, 279, 326, 450
Zsp2I	ATGCAT	1 cut(s)	212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.