Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008043

Physical Location & Seq

Genomic Coordinates Forward (+)

18982643 .. 18984246

Gene Structure 1604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G205300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 618 bp

ATGAGCAGCTGCTCTTCCATGGCCTCCCTTCTCATCACACCCCCCACTGCTACTCTGCAACTCAAGGAAGATCGCATGAGGGTCAGCCCTGTAATTACGAACCCATCATCCAAAATTGACCAGACTGGTCTGAGAAATTCTAGACGTCATGGGTGGTGTTTTGTGACAAAATCTAAGATGACCGTTGAAGGAGATGTGCTTGAGAAACAATCAGTCAGTGTTCAGGACAAAAATGATTTTGGAGTTGTTAGTGTCCACCATGTTGGATTGCTGTGTGAAAACCTGGAAAGGTCGCTCAGCTTTTATCAGAATCTTCTTGGTCTTGAGATAAATGAGGCTAGGCCTCATGACAAGCTCCCCTATAGAGGTGCTTGGTTATGGGTTGGTTCTGAGATGATTCATCTTATGGAGCTTCCCAATCCTGATCCTTTAACTGGAAGACCTGAGCATGGAGGCCGCGATCGTCATACTTGTATTGCAATCCGAGATGTGGCTAAGCTGAAAGCAATCCTTGACAAAGCTGGTATTCCCTACACGCTTAGCAAGTCTGGGAGGCCAGCTATTTTTACACGAGACCCGGATGCAAATGCTCTGGAATTTACACAAGTTGATAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyoxalase

Protein Analysis

206

Amino Acids

22.82

Weight (kDa)

7.74

Isoelectric Point (pI)

40.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008043)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57040
fragaria_vesca	FvH4_1g07980
malus_domestica	MD02G1084200.v1.1 MD15G1211500.v1.1
prunus_persica	Prupe.7G205300_v2.0.a1 Prupe.7G205300_v2.0.a1
pyrus_communis	pycom02g06700 pycom15g18810
rosa_chinensis	RchiOBHm_Chr2g0093891 RchiOBHm_Chr2g0094011
rosa_laevigata	RLG00000001330 RLG00000016443 RLG00000016445
rosa_multiflora	Rmu_sc0003027.1_g000004 Rmu_sc0017523.1_g000017
rosa_roxburghii	Rroxscaffold_2G00147560
rosa_rugosa	Rorug02G0040300
rosa_samantha	Rh2AG087000 Rh2BG087800 Rh2CG090100 Rh2DG085700 Rh2DG086900 Rh7AG429100 Rh7CG447900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	148
AccII	CGCG	1 cut(s)	459
AciI	CCGC	1 cut(s)	457
AclWI	GGATC	1 cut(s)	419
AcsI	RAATTY	2 cut(s)	136, 596
AcyI	GRCGYC	1 cut(s)	145
AfiI	CCNNNNNNNGG	4 cut(s)	365, 434, 449, 490
AgsI	TTSAA	1 cut(s)	188
AjnI	CCWGG	1 cut(s)	282
AloI	GAACNNNNNNTCC	2 cut(s)	92, 124
AluBI	AGCT	8 cut(s)	9, 300, 355, 412, 499, 521, 560, 615
AluI	AGCT	8 cut(s)	9, 300, 355, 412, 499, 521, 560, 615
Alw26I	GTCTC	1 cut(s)	567
AlwI	GGATC	1 cut(s)	419
AoxI	GGCC	4 cut(s)	21, 341, 454, 554
ApeKI	GCWGC	2 cut(s)	6, 9
ApoI	RAATTY	2 cut(s)	136, 596
AsuC2I	CCSGG	1 cut(s)	578
BauI	CACGAG	1 cut(s)	570
BbsI	GAAGAC	1 cut(s)	445
BbvI	GCAGC	1 cut(s)	18
BccI	CCATC	1 cut(s)	112
BciT130I	CCWGG	1 cut(s)	284
BcnI	CCSGG	1 cut(s)	578
BcoDI	GTCTC	1 cut(s)	567
BfaI	CTAG	2 cut(s)	141, 339
BfmI	CTRYAG	1 cut(s)	361
BisI	GCNGC	3 cut(s)	7, 10, 457
BlpI	GCTNAGC	3 cut(s)	296, 495, 539
BlsI	GCNGC	3 cut(s)	8, 11, 458
Bme1390I	CCNGG	2 cut(s)	284, 578
BmrFI	CCNGG	2 cut(s)	284, 578
BmsI	GCATC	1 cut(s)	571
BpiI	GAAGAC	1 cut(s)	445
Bpu10I	CCTNAGC	1 cut(s)	444
Bpu1102I	GCTNAGC	3 cut(s)	296, 495, 539
BpuEI	CTTGAG	3 cut(s)	47, 221, 344
BpuMI	CCSGG	1 cut(s)	578
BsaHI	GRCGYC	1 cut(s)	145
BsaI	GGTCTC	1 cut(s)	567
BsaJI	CCNNGG	1 cut(s)	18
Bsc4I	CCNNNNNNNGG	4 cut(s)	365, 434, 449, 490
Bse1I	ACTGG	2 cut(s)	130, 439
BseBI	CCWGG	1 cut(s)	284
BseDI	CCNNGG	1 cut(s)	18
BseGI	GGATG	2 cut(s)	107, 586
BseLI	CCNNNNNNNGG	4 cut(s)	365, 434, 449, 490
BseMII	CTCAG	4 cut(s)	122, 310, 381, 435
BseNI	ACTGG	2 cut(s)	130, 439
BseXI	GCAGC	1 cut(s)	18
Bsh1236I	CGCG	1 cut(s)	459
Bsh1285I	CGRYCG	1 cut(s)	463
BshFI	GGCC	4 cut(s)	23, 343, 456, 556
BsiEI	CGRYCG	1 cut(s)	463
BsiSI	CCGG	1 cut(s)	578
BslI	CCNNNNNNNGG	4 cut(s)	365, 434, 449, 490
BsmAI	GTCTC	1 cut(s)	567
BsnI	GGCC	4 cut(s)	23, 343, 456, 556
Bso31I	GGTCTC	1 cut(s)	567
Bsp143I	GATC	3 cut(s)	70, 424, 460
Bsp1720I	GCTNAGC	3 cut(s)	296, 495, 539
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	1 cut(s)	457
BspANI	GGCC	4 cut(s)	23, 343, 456, 556
BspCNI	CTCAG	4 cut(s)	123, 309, 382, 436
BspFNI	CGCG	1 cut(s)	459
BspHI	TCATGA	1 cut(s)	346
BspPI	GGATC	1 cut(s)	419
BspQI	GCTCTTC	1 cut(s)	19
BspTNI	GGTCTC	1 cut(s)	567
BsrI	ACTGG	2 cut(s)	130, 439
BssECI	CCNNGG	1 cut(s)	18
BssMI	GATC	3 cut(s)	70, 424, 460
BssNI	GRCGYC	1 cut(s)	145
BssSI	CACGAG	1 cut(s)	570
BssT1I	CCWWGG	1 cut(s)	18
Bst2BI	CACGAG	1 cut(s)	570
Bst2UI	CCWGG	1 cut(s)	284
Bst4CI	ACNGT	1 cut(s)	184
Bst6I	CTCTTC	1 cut(s)	19
BstACI	GRCGYC	1 cut(s)	145
BstC8I	GCNNGC	1 cut(s)	558
BstDEI	CTNAG	7 cut(s)	131, 174, 296, 390, 444, 495, 539
BstDSI	CCRYGG	1 cut(s)	18
BstF5I	GGATG	2 cut(s)	107, 586
BstFNI	CGCG	1 cut(s)	459
BstKTI	GATC	3 cut(s)	73, 427, 463
BstMAI	GTCTC	1 cut(s)	567
BstMBI	GATC	3 cut(s)	70, 424, 460
BstMCI	CGRYCG	1 cut(s)	463
BstNI	CCWGG	1 cut(s)	284
BstSCI	CCNGG	2 cut(s)	282, 576
BstSFI	CTRYAG	1 cut(s)	361
BstUI	CGCG	1 cut(s)	459
BstV1I	GCAGC	1 cut(s)	18
BstV2I	GAAGAC	1 cut(s)	445
BstXI	CCANNNNNNTGG	1 cut(s)	263
BsuRI	GGCC	4 cut(s)	23, 343, 456, 556
BtgI	CCRYGG	1 cut(s)	18
BtsCI	GGATG	2 cut(s)	107, 586
BtsI	GCAGTG	1 cut(s)	45
BtsIMutI	CAGTG	2 cut(s)	45, 223
Cac8I	GCNNGC	1 cut(s)	558
CciI	TCATGA	1 cut(s)	346
CviAII	CATG	6 cut(s)	19, 76, 149, 260, 347, 449
DdeI	CTNAG	7 cut(s)	131, 174, 296, 390, 444, 495, 539
DpnI	GATC	3 cut(s)	72, 426, 462
DpnII	GATC	3 cut(s)	70, 424, 460
Eam1104I	CTCTTC	1 cut(s)	19
EarI	CTCTTC	1 cut(s)	19
Eco130I	CCWWGG	1 cut(s)	18
Eco147I	AGGCCT	1 cut(s)	343
Eco31I	GGTCTC	1 cut(s)	567
EcoRII	CCWGG	1 cut(s)	282
EcoT14I	CCWWGG	1 cut(s)	18
ErhI	CCWWGG	1 cut(s)	18
FaeI	CATG	6 cut(s)	22, 79, 152, 263, 350, 452
FalI	AAGNNNNNCTT	2 cut(s)	495, 527
FatI	CATG	6 cut(s)	18, 75, 148, 259, 346, 448
Fnu4HI	GCNGC	3 cut(s)	7, 10, 457
FokI	GGATG	2 cut(s)	94, 593
Fsp4HI	GCNGC	3 cut(s)	7, 10, 457
FspBI	CTAG	2 cut(s)	141, 339
GluI	GCNGC	3 cut(s)	7, 10, 457
HaeIII	GGCC	4 cut(s)	23, 343, 456, 556
HapII	CCGG	1 cut(s)	578
Hin1I	GRCGYC	1 cut(s)	145
Hin1II	CATG	6 cut(s)	22, 79, 152, 263, 350, 452
HinfI	GANTC	2 cut(s)	310, 397
HpaII	CCGG	1 cut(s)	578
Hpy166II	GTNNAC	1 cut(s)	256
Hpy188I	TCNGA	4 cut(s)	132, 309, 391, 485
Hpy188III	TCNNGA	6 cut(s)	141, 224, 323, 347, 422, 593
Hpy8I	GTNNAC	1 cut(s)	256
HpyAV	CCTTC	2 cut(s)	38, 182
HpyCH4III	ACNGT	1 cut(s)	184
HpyCH4IV	ACGT	1 cut(s)	145
HpyCH4V	TGCA	3 cut(s)	58, 479, 584
HpyF3I	CTNAG	7 cut(s)	131, 174, 296, 390, 444, 495, 539
HpySE526I	ACGT	1 cut(s)	145
Hsp92I	GRCGYC	1 cut(s)	145
Hsp92II	CATG	6 cut(s)	22, 79, 152, 263, 350, 452
Kzo9I	GATC	3 cut(s)	70, 424, 460
LguI	GCTCTTC	1 cut(s)	19
LmnI	GCTCC	2 cut(s)	360, 409
Lsp1109I	GCAGC	1 cut(s)	18
LweI	GCATC	1 cut(s)	571
MaeI	CTAG	2 cut(s)	141, 339
MaeII	ACGT	1 cut(s)	145
MaeIII	GTNAC	1 cut(s)	163
MalI	GATC	3 cut(s)	72, 426, 462
MboI	GATC	3 cut(s)	70, 424, 460
MboII	GAAGA	4 cut(s)	6, 80, 305, 450
MluCI	AATT	4 cut(s)	93, 114, 136, 596
MmeI	TCCRAC	1 cut(s)	244
MnlI	CCTC	7 cut(s)	34, 72, 328, 354, 359, 446, 546
MseI	TTAA	1 cut(s)	431
MspA1I	CMGCKG	1 cut(s)	9
MspI	CCGG	1 cut(s)	578
MspR9I	CCNGG	2 cut(s)	284, 578
MvaI	CCWGG	1 cut(s)	284
MvnI	CGCG	1 cut(s)	459
NciI	CCSGG	1 cut(s)	578
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	3 cut(s)	70, 424, 460
NlaIII	CATG	6 cut(s)	22, 79, 152, 263, 350, 452
NmuCI	GTSAC	1 cut(s)	163
PagI	TCATGA	1 cut(s)	346
PceI	AGGCCT	1 cut(s)	343
PciSI	GCTCTTC	1 cut(s)	19
PfeI	GAWTC	2 cut(s)	310, 397
PkrI	GCNGC	3 cut(s)	8, 11, 458
Ple19I	CGATCG	1 cut(s)	463
Psp6I	CCWGG	1 cut(s)	282
PspGI	CCWGG	1 cut(s)	282
PvuI	CGATCG	1 cut(s)	463
PvuII	CAGCTG	1 cut(s)	9
SapI	GCTCTTC	1 cut(s)	19
SaqAI	TTAA	1 cut(s)	431
SatI	GCNGC	3 cut(s)	7, 10, 457
Sau3AI	GATC	3 cut(s)	70, 424, 460
ScrFI	CCNGG	2 cut(s)	284, 578
SfaNI	GCATC	1 cut(s)	571
SfcI	CTRYAG	1 cut(s)	361
SmlI	CTYRAG	3 cut(s)	62, 200, 323
SmoI	CTYRAG	3 cut(s)	62, 200, 323
Sse9I	AATT	4 cut(s)	93, 114, 136, 596
SseBI	AGGCCT	1 cut(s)	343
SsiI	CCGC	1 cut(s)	457
SspMI	CTAG	2 cut(s)	141, 339
StuI	AGGCCT	1 cut(s)	343
StyD4I	CCNGG	2 cut(s)	282, 576
StyI	CCWWGG	1 cut(s)	18
TaaI	ACNGT	1 cut(s)	184
TaiI	ACGT	1 cut(s)	148
TasI	AATT	4 cut(s)	93, 114, 136, 596
TauI	GCSGC	1 cut(s)	459
TfiI	GAWTC	2 cut(s)	310, 397
Tru1I	TTAA	1 cut(s)	431
Tru9I	TTAA	1 cut(s)	431
TscAI	CASTG	2 cut(s)	52, 223
TseFI	GTSAC	1 cut(s)	163
TseI	GCWGC	2 cut(s)	6, 9
Tsp45I	GTSAC	1 cut(s)	163
TspDTI	ATGAA	1 cut(s)	389
TspRI	CASTG	2 cut(s)	52, 223
XapI	RAATTY	2 cut(s)	136, 596
XbaI	TCTAGA	1 cut(s)	140
XspI	CTAG	2 cut(s)	141, 339
ZraI	GACGTC	1 cut(s)	146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.