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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17490 AT1G72690 |
| fragaria_vesca | FvH4_1g07820 FvH4_6g33970 |
| malus_domestica | MD02G1082200.v1.1 MD09G1190500.v1.1 MD13G1283500.v1.1 MD15G1209800.v1.1 |
| prunus_persica | Prupe.3G046400_v2.0.a1 Prupe.7G206700_v2.0.a1 |
| pyrus_communis | pycom02g06510 pycom09g10690 pycom15g18590 |
| rosa_chinensis | RchiOBHm_Chr2g0093691 RchiOBHm_Chr2g0144001 RchiOBHm_Chr3g0459511 |
| rosa_laevigata | RLG00000016429 |
| rosa_multiflora | Rmu_sc0014811.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00101470 Rroxscaffold_2G00147890 |
| rosa_rugosa | Rorug02G0039000 |
| rosa_samantha | Rh2AG085400 Rh2AG437700 Rh2BG085800 Rh2BG445900 Rh2BG446200 Rh2CG088200 Rh2CG424300 Rh2DG083600 Rh2DG456100 Rh2DG456400 Rh3AG094900 Rh3CG099200 Rh3DG098600 |
| rosa_wichuraiana | Rw0G013880 Rw2G035710 Rw2G035740 Rw3G008170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 55 |
| AciI | CCGC | 1 cut(s) | 5 |
| AcuI | CTGAAG | 1 cut(s) | 480 |
| AfaI | GTAC | 1 cut(s) | 151 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 272 |
| AgsI | TTSAA | 4 cut(s) | 71, 206, 239, 536 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 16, 48 |
| AluBI | AGCT | 3 cut(s) | 32, 191, 415 |
| AluI | AGCT | 3 cut(s) | 32, 191, 415 |
| Alw26I | GTCTC | 1 cut(s) | 267 |
| AsuHPI | GGTGA | 4 cut(s) | 27, 399, 435, 603 |
| BanI | GGYRCC | 1 cut(s) | 55 |
| BccI | CCATC | 1 cut(s) | 255 |
| BcoDI | GTCTC | 1 cut(s) | 267 |
| BfaI | CTAG | 1 cut(s) | 176 |
| BfmI | CTRYAG | 1 cut(s) | 231 |
| BmiI | GGNNCC | 2 cut(s) | 57, 522 |
| BmsI | GCATC | 2 cut(s) | 460, 481 |
| Bsa29I | ATCGAT | 2 cut(s) | 507, 572 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 247, 277 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 272 |
| Bse1I | ACTGG | 1 cut(s) | 602 |
| BseCI | ATCGAT | 2 cut(s) | 507, 572 |
| BseGI | GGATG | 2 cut(s) | 247, 577 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 272 |
| BseNI | ACTGG | 1 cut(s) | 602 |
| BseRI | GAGGAG | 1 cut(s) | 233 |
| BseYI | CCCAGC | 1 cut(s) | 17 |
| BshNI | GGYRCC | 1 cut(s) | 55 |
| BshVI | ATCGAT | 2 cut(s) | 507, 572 |
| BsiWI | CGTACG | 1 cut(s) | 149 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 272 |
| BsmAI | GTCTC | 1 cut(s) | 267 |
| Bsp143I | GATC | 3 cut(s) | 124, 387, 508 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspDI | ATCGAT | 2 cut(s) | 507, 572 |
| BspHI | TCATGA | 2 cut(s) | 418, 433 |
| BspLI | GGNNCC | 2 cut(s) | 57, 522 |
| BspT107I | GGYRCC | 1 cut(s) | 55 |
| BsrI | ACTGG | 1 cut(s) | 602 |
| BssMI | GATC | 3 cut(s) | 124, 387, 508 |
| Bst4CI | ACNGT | 1 cut(s) | 633 |
| Bst6I | CTCTTC | 1 cut(s) | 78 |
| BstC8I | GCNNGC | 2 cut(s) | 30, 146 |
| BstDEI | CTNAG | 1 cut(s) | 615 |
| BstF5I | GGATG | 2 cut(s) | 247, 577 |
| BstKTI | GATC | 3 cut(s) | 127, 390, 511 |
| BstMAI | GTCTC | 1 cut(s) | 267 |
| BstMBI | GATC | 3 cut(s) | 124, 387, 508 |
| BstNSI | RCATGY | 1 cut(s) | 148 |
| BstSFI | CTRYAG | 1 cut(s) | 231 |
| Bsu15I | ATCGAT | 2 cut(s) | 507, 572 |
| BsuTUI | ATCGAT | 2 cut(s) | 507, 572 |
| BtsCI | GGATG | 2 cut(s) | 247, 577 |
| BtsIMutI | CAGTG | 1 cut(s) | 105 |
| Cac8I | GCNNGC | 2 cut(s) | 30, 146 |
| CciI | TCATGA | 2 cut(s) | 418, 433 |
| ClaI | ATCGAT | 2 cut(s) | 507, 572 |
| Csp6I | GTAC | 1 cut(s) | 150 |
| CviAII | CATG | 9 cut(s) | 140, 145, 272, 391, 398, 419, 434, 470, 512 |
| CviJI | RGCY | 7 cut(s) | 21, 32, 191, 230, 415, 521, 560 |
| CviKI_1 | RGCY | 7 cut(s) | 21, 32, 191, 230, 415, 521, 560 |
| CviQI | GTAC | 1 cut(s) | 150 |
| DdeI | CTNAG | 1 cut(s) | 615 |
| DpnI | GATC | 3 cut(s) | 126, 389, 510 |
| DpnII | GATC | 3 cut(s) | 124, 387, 508 |
| Eam1104I | CTCTTC | 1 cut(s) | 78 |
| EarI | CTCTTC | 1 cut(s) | 78 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco57I | CTGAAG | 1 cut(s) | 480 |
| FaeI | CATG | 9 cut(s) | 143, 148, 275, 394, 401, 422, 437, 473, 515 |
| FatI | CATG | 9 cut(s) | 139, 144, 271, 390, 397, 418, 433, 469, 511 |
| FokI | GGATG | 2 cut(s) | 234, 564 |
| FspBI | CTAG | 1 cut(s) | 176 |
| GsaI | CCCAGC | 1 cut(s) | 21 |
| Hin1II | CATG | 9 cut(s) | 143, 148, 275, 394, 401, 422, 437, 473, 515 |
| HindIII | AAGCTT | 2 cut(s) | 30, 413 |
| HinfI | GANTC | 5 cut(s) | 8, 260, 296, 320, 574 |
| HphI | GGTGA | 4 cut(s) | 27, 399, 435, 603 |
| Hpy166II | GTNNAC | 1 cut(s) | 629 |
| Hpy188I | TCNGA | 2 cut(s) | 331, 525 |
| Hpy188III | TCNNGA | 2 cut(s) | 419, 434 |
| Hpy8I | GTNNAC | 1 cut(s) | 629 |
| HpyAV | CCTTC | 4 cut(s) | 208, 364, 613, 617 |
| HpyCH4III | ACNGT | 1 cut(s) | 633 |
| HpyCH4V | TGCA | 2 cut(s) | 103, 394 |
| HpyF3I | CTNAG | 1 cut(s) | 615 |
| Hsp92II | CATG | 9 cut(s) | 143, 148, 275, 394, 401, 422, 437, 473, 515 |
| Kzo9I | GATC | 3 cut(s) | 124, 387, 508 |
| LmnI | GCTCC | 3 cut(s) | 92, 196, 526 |
| LpnPI | CCDG | 3 cut(s) | 31, 293, 615 |
| LweI | GCATC | 2 cut(s) | 460, 481 |
| MaeI | CTAG | 1 cut(s) | 176 |
| MaeIII | GTNAC | 2 cut(s) | 405, 441 |
| MalI | GATC | 3 cut(s) | 126, 389, 510 |
| MboI | GATC | 3 cut(s) | 124, 387, 508 |
| MboII | GAAGA | 3 cut(s) | 95, 473, 600 |
| MluCI | AATT | 1 cut(s) | 61 |
| MlyI | GAGTC | 3 cut(s) | 269, 305, 314 |
| MnlI | CCTC | 5 cut(s) | 211, 220, 277, 541, 550 |
| MseI | TTAA | 1 cut(s) | 516 |
| NdeII | GATC | 3 cut(s) | 124, 387, 508 |
| NlaIII | CATG | 9 cut(s) | 143, 148, 275, 394, 401, 422, 437, 473, 515 |
| NlaIV | GGNNCC | 2 cut(s) | 57, 522 |
| NmuCI | GTSAC | 2 cut(s) | 405, 441 |
| NspI | RCATGY | 1 cut(s) | 148 |
| PaeI | GCATGC | 1 cut(s) | 148 |
| PagI | TCATGA | 2 cut(s) | 418, 433 |
| PfeI | GAWTC | 2 cut(s) | 8, 574 |
| Pfl23II | CGTACG | 1 cut(s) | 149 |
| PflFI | GACNNNGTC | 2 cut(s) | 182, 259 |
| PleI | GAGTC | 3 cut(s) | 268, 304, 314 |
| PpsI | GAGTC | 3 cut(s) | 268, 304, 314 |
| PspFI | CCCAGC | 1 cut(s) | 17 |
| PspLI | CGTACG | 1 cut(s) | 149 |
| PspN4I | GGNNCC | 2 cut(s) | 57, 522 |
| PsyI | GACNNNGTC | 2 cut(s) | 182, 259 |
| RsaI | GTAC | 1 cut(s) | 151 |
| RsaNI | GTAC | 1 cut(s) | 150 |
| SaqAI | TTAA | 1 cut(s) | 516 |
| Sau3AI | GATC | 3 cut(s) | 124, 387, 508 |
| SchI | GAGTC | 3 cut(s) | 269, 305, 314 |
| SetI | ASST | 6 cut(s) | 34, 61, 193, 417, 616, 628 |
| SfaNI | GCATC | 2 cut(s) | 460, 481 |
| SfcI | CTRYAG | 1 cut(s) | 231 |
| SphI | GCATGC | 1 cut(s) | 148 |
| Sse9I | AATT | 1 cut(s) | 61 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SspMI | CTAG | 1 cut(s) | 176 |
| TaaI | ACNGT | 1 cut(s) | 633 |
| TaqI | TCGA | 4 cut(s) | 299, 507, 555, 572 |
| TasI | AATT | 1 cut(s) | 61 |
| TfiI | GAWTC | 2 cut(s) | 8, 574 |
| Tru1I | TTAA | 1 cut(s) | 516 |
| Tru9I | TTAA | 1 cut(s) | 516 |
| TscAI | CASTG | 1 cut(s) | 112 |
| TseFI | GTSAC | 2 cut(s) | 405, 441 |
| Tsp45I | GTSAC | 2 cut(s) | 405, 441 |
| TspDTI | ATGAA | 3 cut(s) | 177, 407, 566 |
| TspGWI | ACGGA | 1 cut(s) | 167 |
| TspRI | CASTG | 1 cut(s) | 112 |
| Tth111I | GACNNNGTC | 2 cut(s) | 182, 259 |
| XceI | RCATGY | 1 cut(s) | 148 |
| XspI | CTAG | 1 cut(s) | 176 |