3-ketoacyl-CoA synthase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G26640 |
| fragaria_vesca | FvH4_1g04020 FvH4_2g29750 FvH4_2g29750 |
| malus_domestica | MD00G1025800.v1.1 MD15G1118900.v1.1 MD15G1178600.v1.1 |
| prunus_persica | Prupe.1G472100_v2.0.a1 Prupe.1G472100_v2.0.a1 Prupe.7G236700_v2.0.a1 |
| pyrus_communis | pycom15g10700 pycom15g16040 |
| rosa_chinensis | RchiOBHm_Chr2g0089491 RchiOBHm_Chr6g0298771 |
| rosa_laevigata | RLG00000011487 RLG00000016035 |
| rosa_multiflora | Rmu_co8400115.1_g000001 Rmu_sc0000197.1_g000003 Rmu_ssc0000397.1_g000013 |
| rosa_roxburghii | Rroxscaffold_2G00151880 Rroxscaffold_7G00169350 |
| rosa_rugosa | Rorug02G0001200 Rorug06G0282800 Rorug06G0282900 |
| rosa_samantha | Rh2AG046500 Rh2BG045100 Rh2CG046900 Rh2DG046500 Rh6AG394300 Rh6BG402100 Rh6CG408000 Rh6DG394600 |
| rosa_wichuraiana | Rw2G003610 Rw6G034490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1064 |
| Acc36I | ACCTGC | 3 cut(s) | 734, 1064, 1287 |
| AccB1I | GGYRCC | 1 cut(s) | 569 |
| AccI | GTMKAC | 1 cut(s) | 303 |
| AccII | CGCG | 1 cut(s) | 73 |
| AccIII | TCCGGA | 1 cut(s) | 82 |
| AciI | CCGC | 1 cut(s) | 316 |
| AclWI | GGATC | 3 cut(s) | 25, 405, 1065 |
| AcsI | RAATTY | 1 cut(s) | 94 |
| AcuI | CTGAAG | 2 cut(s) | 422, 764 |
| AfaI | GTAC | 5 cut(s) | 155, 332, 418, 504, 842 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 259, 496, 1389, 1507 |
| AflII | CTTAAG | 1 cut(s) | 1469 |
| AgsI | TTSAA | 7 cut(s) | 91, 483, 649, 835, 915, 1177, 1441 |
| AleI | CACNNNNGTG | 1 cut(s) | 978 |
| Alw26I | GTCTC | 2 cut(s) | 408, 874 |
| AlwI | GGATC | 3 cut(s) | 25, 405, 1065 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 500 |
| Aor13HI | TCCGGA | 1 cut(s) | 82 |
| AoxI | GGCC | 2 cut(s) | 469, 1108 |
| ApaI | GGGCCC | 1 cut(s) | 1112 |
| ApeKI | GCWGC | 5 cut(s) | 188, 639, 735, 899, 1138 |
| ApoI | RAATTY | 1 cut(s) | 94 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1172 |
| AspS9I | GGNCC | 3 cut(s) | 939, 1108, 1109 |
| AsuHPI | GGTGA | 4 cut(s) | 274, 304, 1088, 1090 |
| AsuII | TTCGAA | 1 cut(s) | 967 |
| AvaII | GGWCC | 1 cut(s) | 939 |
| AxyI | CCTNAGG | 1 cut(s) | 609 |
| BaeGI | GKGCMC | 1 cut(s) | 1112 |
| BanI | GGYRCC | 1 cut(s) | 569 |
| BanII | GRGCYC | 1 cut(s) | 1112 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 110, 142 |
| BbsI | GAAGAC | 2 cut(s) | 940, 1026 |
| BbvCI | CCTCAGC | 1 cut(s) | 552 |
| BbvI | GCAGC | 5 cut(s) | 175, 651, 722, 886, 1125 |
| BccI | CCATC | 8 cut(s) | 46, 667, 724, 883, 1057, 1315, 1332, 1501 |
| BceAI | ACGGC | 1 cut(s) | 1238 |
| BcoDI | GTCTC | 2 cut(s) | 408, 874 |
| BfaI | CTAG | 2 cut(s) | 540, 1214 |
| BfmI | CTRYAG | 2 cut(s) | 637, 736 |
| BfrI | CTTAAG | 1 cut(s) | 1469 |
| BfuAI | ACCTGC | 3 cut(s) | 734, 1064, 1287 |
| BglII | AGATCT | 3 cut(s) | 195, 217, 464 |
| BisI | GCNGC | 5 cut(s) | 189, 640, 736, 900, 1139 |
| BlsI | GCNGC | 5 cut(s) | 190, 641, 737, 901, 1140 |
| Bme18I | GGWCC | 1 cut(s) | 939 |
| BmgT120I | GGNCC | 3 cut(s) | 939, 1108, 1109 |
| BmiI | GGNNCC | 4 cut(s) | 571, 1110, 1305, 1526 |
| BmrI | ACTGGG | 1 cut(s) | 320 |
| BmsI | GCATC | 4 cut(s) | 247, 796, 1069, 1291 |
| BmuI | ACTGGG | 1 cut(s) | 320 |
| BpiI | GAAGAC | 2 cut(s) | 940, 1026 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1336, 1368 |
| BpmI | CTGGAG | 1 cut(s) | 1263 |
| Bpu10I | CCTNAGC | 1 cut(s) | 552 |
| Bpu14I | TTCGAA | 1 cut(s) | 967 |
| BpuEI | CTTGAG | 1 cut(s) | 479 |
| Bsa29I | ATCGAT | 1 cut(s) | 1327 |
| BsaJI | CCNNGG | 5 cut(s) | 145, 472, 672, 1383, 1502 |
| BsaWI | WCCGGW | 1 cut(s) | 82 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 259, 496, 1389, 1507 |
| Bse1I | ACTGG | 4 cut(s) | 326, 418, 810, 842 |
| Bse21I | CCTNAGG | 1 cut(s) | 609 |
| BseAI | TCCGGA | 1 cut(s) | 82 |
| BseCI | ATCGAT | 1 cut(s) | 1327 |
| BseDI | CCNNGG | 5 cut(s) | 145, 472, 672, 1383, 1502 |
| BseGI | GGATG | 9 cut(s) | 735, 787, 894, 1197, 1267, 1320, 1398, 1512, 1516 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 259, 496, 1389, 1507 |
| BseMII | CTCAG | 2 cut(s) | 543, 939 |
| BseNI | ACTGG | 4 cut(s) | 326, 418, 810, 842 |
| BseRI | GAGGAG | 1 cut(s) | 443 |
| BseSI | GKGCMC | 1 cut(s) | 1112 |
| BseXI | GCAGC | 5 cut(s) | 175, 651, 722, 886, 1125 |
| BsgI | GTGCAG | 1 cut(s) | 762 |
| Bsh1236I | CGCG | 1 cut(s) | 73 |
| BshFI | GGCC | 2 cut(s) | 471, 1110 |
| BshNI | GGYRCC | 1 cut(s) | 569 |
| BshVI | ATCGAT | 1 cut(s) | 1327 |
| BsiSI | CCGG | 1 cut(s) | 83 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 259, 496, 1389, 1507 |
| BsmAI | GTCTC | 2 cut(s) | 408, 874 |
| BsnI | GGCC | 2 cut(s) | 471, 1110 |
| Bsp119I | TTCGAA | 1 cut(s) | 967 |
| Bsp120I | GGGCCC | 1 cut(s) | 1108 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1112 |
| Bsp13I | TCCGGA | 1 cut(s) | 82 |
| Bsp19I | CCATGG | 3 cut(s) | 145, 672, 1502 |
| Bsp68I | TCGCGA | 1 cut(s) | 73 |
| BspACI | CCGC | 1 cut(s) | 316 |
| BspANI | GGCC | 2 cut(s) | 471, 1110 |
| BspCNI | CTCAG | 2 cut(s) | 544, 938 |
| BspDI | ATCGAT | 1 cut(s) | 1327 |
| BspEI | TCCGGA | 1 cut(s) | 82 |
| BspFNI | CGCG | 1 cut(s) | 73 |
| BspLI | GGNNCC | 4 cut(s) | 571, 1110, 1305, 1526 |
| BspMAI | CTGCAG | 2 cut(s) | 641, 740 |
| BspMI | ACCTGC | 3 cut(s) | 734, 1064, 1287 |
| BspPI | GGATC | 3 cut(s) | 25, 405, 1065 |
| BspQI | GCTCTTC | 1 cut(s) | 1243 |
| BspT104I | TTCGAA | 1 cut(s) | 967 |
| BspT107I | GGYRCC | 1 cut(s) | 569 |
| BspTI | CTTAAG | 1 cut(s) | 1469 |
| BsrI | ACTGG | 4 cut(s) | 326, 418, 810, 842 |
| BssECI | CCNNGG | 5 cut(s) | 145, 472, 672, 1383, 1502 |
| BssT1I | CCWWGG | 5 cut(s) | 145, 472, 672, 1383, 1502 |
| Bst4CI | ACNGT | 4 cut(s) | 301, 939, 964, 1451 |
| Bst6I | CTCTTC | 1 cut(s) | 1243 |
| BstAFI | CTTAAG | 1 cut(s) | 1469 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1079 |
| BstBI | TTCGAA | 1 cut(s) | 967 |
| BstDEI | CTNAG | 4 cut(s) | 552, 591, 609, 925 |
| BstDSI | CCRYGG | 3 cut(s) | 145, 672, 1502 |
| BstEII | GGTNACC | 1 cut(s) | 125 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 494 |
| BstF5I | GGATG | 9 cut(s) | 735, 787, 894, 1197, 1267, 1320, 1398, 1512, 1516 |
| BstFNI | CGCG | 1 cut(s) | 73 |
| BstMAI | GTCTC | 2 cut(s) | 408, 874 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 596, 1079, 1303 |
| BstPI | GGTNACC | 1 cut(s) | 125 |
| BstSFI | CTRYAG | 2 cut(s) | 637, 736 |
| BstSLI | GKGCMC | 1 cut(s) | 1112 |
| BstUI | CGCG | 1 cut(s) | 73 |
| BstV1I | GCAGC | 5 cut(s) | 175, 651, 722, 886, 1125 |
| BstV2I | GAAGAC | 2 cut(s) | 940, 1026 |
| BstX2I | RGATCY | 4 cut(s) | 195, 217, 464, 1057 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1331 |
| BstYI | RGATCY | 4 cut(s) | 195, 217, 464, 1057 |
| Bsu15I | ATCGAT | 1 cut(s) | 1327 |
| Bsu36I | CCTNAGG | 1 cut(s) | 609 |
| BsuRI | GGCC | 2 cut(s) | 471, 1110 |
| BsuTUI | ATCGAT | 1 cut(s) | 1327 |
| BtgI | CCRYGG | 3 cut(s) | 145, 672, 1502 |
| BtgZI | GCGATG | 1 cut(s) | 54 |
| BtsCI | GGATG | 9 cut(s) | 735, 787, 894, 1197, 1267, 1320, 1398, 1512, 1516 |
| BtsI | GCAGTG | 1 cut(s) | 745 |
| BtsIMutI | CAGTG | 6 cut(s) | 297, 333, 745, 803, 960, 1456 |
| BtuMI | TCGCGA | 1 cut(s) | 73 |
| BveI | ACCTGC | 3 cut(s) | 734, 1064, 1287 |
| CaiI | CAGNNNCTG | 1 cut(s) | 500 |
| Cfr13I | GGNCC | 3 cut(s) | 939, 1108, 1109 |
| ClaI | ATCGAT | 1 cut(s) | 1327 |
| Csp6I | GTAC | 5 cut(s) | 154, 331, 417, 503, 841 |
| CviAII | CATG | 6 cut(s) | 146, 673, 817, 1238, 1413, 1503 |
| CviQI | GTAC | 5 cut(s) | 154, 331, 417, 503, 841 |
| DdeI | CTNAG | 4 cut(s) | 552, 591, 609, 925 |
| DraI | TTTAAA | 1 cut(s) | 1086 |
| Eam1104I | CTCTTC | 1 cut(s) | 1243 |
| EarI | CTCTTC | 1 cut(s) | 1243 |
| Eco130I | CCWWGG | 5 cut(s) | 145, 472, 672, 1383, 1502 |
| Eco24I | GRGCYC | 1 cut(s) | 1112 |
| Eco47I | GGWCC | 1 cut(s) | 939 |
| Eco57I | CTGAAG | 2 cut(s) | 422, 764 |
| Eco81I | CCTNAGG | 1 cut(s) | 609 |
| Eco91I | GGTNACC | 1 cut(s) | 125 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 494 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1109 |
| EcoO65I | GGTNACC | 1 cut(s) | 125 |
| EcoT14I | CCWWGG | 5 cut(s) | 145, 472, 672, 1383, 1502 |
| EcoT38I | GRGCYC | 1 cut(s) | 1112 |
| ErhI | CCWWGG | 5 cut(s) | 145, 472, 672, 1383, 1502 |
| FaeI | CATG | 6 cut(s) | 149, 676, 820, 1241, 1416, 1506 |
| FatI | CATG | 6 cut(s) | 145, 672, 816, 1237, 1412, 1502 |
| FauI | CCCGC | 1 cut(s) | 323 |
| FauNDI | CATATG | 1 cut(s) | 1299 |
| FblI | GTMKAC | 1 cut(s) | 303 |
| Fnu4HI | GCNGC | 5 cut(s) | 189, 640, 736, 900, 1139 |
| FokI | GGATG | 9 cut(s) | 742, 774, 901, 1184, 1274, 1327, 1405, 1519, 1523 |
| FriOI | GRGCYC | 1 cut(s) | 1112 |
| Fsp4HI | GCNGC | 5 cut(s) | 189, 640, 736, 900, 1139 |
| FspBI | CTAG | 2 cut(s) | 540, 1214 |
| GluI | GCNGC | 5 cut(s) | 189, 640, 736, 900, 1139 |
| GsuI | CTGGAG | 1 cut(s) | 1263 |
| HaeIII | GGCC | 2 cut(s) | 471, 1110 |
| HapII | CCGG | 1 cut(s) | 83 |
| Hin1II | CATG | 6 cut(s) | 149, 676, 820, 1241, 1416, 1506 |
| HincII | GTYRAC | 2 cut(s) | 340, 1551 |
| HindII | GTYRAC | 2 cut(s) | 340, 1551 |
| HindIII | AAGCTT | 2 cut(s) | 119, 863 |
| HinfI | GANTC | 8 cut(s) | 277, 365, 433, 454, 479, 621, 1022, 1437 |
| HpaI | GTTAAC | 1 cut(s) | 340 |
| HpaII | CCGG | 1 cut(s) | 83 |
| HphI | GGTGA | 4 cut(s) | 274, 304, 1088, 1090 |
| Hpy166II | GTNNAC | 6 cut(s) | 304, 331, 340, 634, 958, 1551 |
| Hpy188I | TCNGA | 7 cut(s) | 750, 888, 928, 1062, 1132, 1211, 1291 |
| Hpy188III | TCNNGA | 7 cut(s) | 72, 83, 369, 458, 494, 625, 1434 |
| Hpy8I | GTNNAC | 6 cut(s) | 304, 331, 340, 634, 958, 1551 |
| HpyAV | CCTTC | 5 cut(s) | 89, 444, 500, 1383, 1456 |
| HpyCH4III | ACNGT | 4 cut(s) | 301, 939, 964, 1451 |
| HpyCH4V | TGCA | 7 cut(s) | 378, 639, 738, 743, 787, 803, 1282 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 596, 1079, 1303 |
| HpyF3I | CTNAG | 4 cut(s) | 552, 591, 609, 925 |
| Hsp92II | CATG | 6 cut(s) | 149, 676, 820, 1241, 1416, 1506 |
| Kpn2I | TCCGGA | 1 cut(s) | 82 |
| KspAI | GTTAAC | 1 cut(s) | 340 |
| LguI | GCTCTTC | 1 cut(s) | 1243 |
| LmnI | GCTCC | 2 cut(s) | 235, 1303 |
| Lsp1109I | GCAGC | 5 cut(s) | 175, 651, 722, 886, 1125 |
| LweI | GCATC | 4 cut(s) | 247, 796, 1069, 1291 |
| MaeI | CTAG | 2 cut(s) | 540, 1214 |
| MaeIII | GTNAC | 4 cut(s) | 125, 1006, 1042, 1445 |
| MfeI | CAATTG | 1 cut(s) | 756 |
| MflI | RGATCY | 4 cut(s) | 195, 217, 464, 1057 |
| MhlI | GDGCHC | 1 cut(s) | 1112 |
| MluCI | AATT | 7 cut(s) | 94, 255, 756, 874, 1265, 1364, 1515 |
| MlyI | GAGTC | 2 cut(s) | 271, 1016 |
| MmeI | TCCRAC | 1 cut(s) | 677 |
| MroI | TCCGGA | 1 cut(s) | 82 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1172 |
| MseI | TTAA | 4 cut(s) | 102, 339, 1085, 1470 |
| MslI | CAYNNNNRTG | 1 cut(s) | 978 |
| MspA1I | CMGCKG | 2 cut(s) | 599, 1138 |
| MspCI | CTTAAG | 1 cut(s) | 1469 |
| MspI | CCGG | 1 cut(s) | 83 |
| MunI | CAATTG | 1 cut(s) | 756 |
| MvnI | CGCG | 1 cut(s) | 73 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 596, 1079, 1303 |
| NcoI | CCATGG | 3 cut(s) | 145, 672, 1502 |
| NdeI | CATATG | 1 cut(s) | 1299 |
| NlaIII | CATG | 6 cut(s) | 149, 676, 820, 1241, 1416, 1506 |
| NlaIV | GGNNCC | 4 cut(s) | 571, 1110, 1305, 1526 |
| NruI | TCGCGA | 1 cut(s) | 73 |
| NspV | TTCGAA | 1 cut(s) | 967 |
| OliI | CACNNNNGTG | 1 cut(s) | 978 |
| PaqCI | CACCTGC | 1 cut(s) | 1064 |
| PciSI | GCTCTTC | 1 cut(s) | 1243 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1172 |
| PfeI | GAWTC | 6 cut(s) | 365, 433, 454, 479, 621, 1437 |
| PkrI | GCNGC | 5 cut(s) | 190, 641, 737, 901, 1140 |
| PleI | GAGTC | 2 cut(s) | 271, 1016 |
| PpsI | GAGTC | 2 cut(s) | 271, 1016 |
| PspEI | GGTNACC | 1 cut(s) | 125 |
| PspN4I | GGNNCC | 4 cut(s) | 571, 1110, 1305, 1526 |
| PspOMI | GGGCCC | 1 cut(s) | 1108 |
| PspPI | GGNCC | 3 cut(s) | 939, 1108, 1109 |
| PstI | CTGCAG | 2 cut(s) | 641, 740 |
| PstNI | CAGNNNCTG | 1 cut(s) | 500 |
| PsuI | RGATCY | 4 cut(s) | 195, 217, 464, 1057 |
| PvuII | CAGCTG | 2 cut(s) | 599, 1138 |
| RruI | TCGCGA | 1 cut(s) | 73 |
| RsaI | GTAC | 5 cut(s) | 155, 332, 418, 504, 842 |
| RsaNI | GTAC | 5 cut(s) | 154, 331, 417, 503, 841 |
| RseI | CAYNNNNRTG | 1 cut(s) | 978 |
| SapI | GCTCTTC | 1 cut(s) | 1243 |
| SaqAI | TTAA | 4 cut(s) | 102, 339, 1085, 1470 |
| SatI | GCNGC | 5 cut(s) | 189, 640, 736, 900, 1139 |
| Sau96I | GGNCC | 3 cut(s) | 939, 1108, 1109 |
| SchI | GAGTC | 2 cut(s) | 271, 1016 |
| SduI | GDGCHC | 1 cut(s) | 1112 |
| SfaNI | GCATC | 4 cut(s) | 247, 796, 1069, 1291 |
| SfcI | CTRYAG | 2 cut(s) | 637, 736 |
| SfuI | TTCGAA | 1 cut(s) | 967 |
| SinI | GGWCC | 1 cut(s) | 939 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 978 |
| SmlI | CTYRAG | 2 cut(s) | 458, 1469 |
| SmoI | CTYRAG | 2 cut(s) | 458, 1469 |
| Sse9I | AATT | 7 cut(s) | 94, 255, 756, 874, 1265, 1364, 1515 |
| SsiI | CCGC | 1 cut(s) | 316 |
| SspMI | CTAG | 2 cut(s) | 540, 1214 |
| StyI | CCWWGG | 5 cut(s) | 145, 472, 672, 1383, 1502 |
| TaaI | ACNGT | 4 cut(s) | 301, 939, 964, 1451 |
| TaqI | TCGA | 6 cut(s) | 275, 370, 697, 967, 1327, 1343 |
| TasI | AATT | 7 cut(s) | 94, 255, 756, 874, 1265, 1364, 1515 |
| TatI | WGTACW | 1 cut(s) | 502 |
| TfiI | GAWTC | 6 cut(s) | 365, 433, 454, 479, 621, 1437 |
| Tru1I | TTAA | 4 cut(s) | 102, 339, 1085, 1470 |
| Tru9I | TTAA | 4 cut(s) | 102, 339, 1085, 1470 |
| TscAI | CASTG | 6 cut(s) | 304, 333, 745, 810, 967, 1456 |
| TseI | GCWGC | 5 cut(s) | 188, 639, 735, 899, 1138 |
| TspDTI | ATGAA | 7 cut(s) | 33, 545, 1226, 1278, 1377, 1409, 1527 |
| TspGWI | ACGGA | 1 cut(s) | 513 |
| TspRI | CASTG | 6 cut(s) | 304, 333, 745, 810, 967, 1456 |
| Vha464I | CTTAAG | 1 cut(s) | 1469 |
| VpaK11BI | GGWCC | 1 cut(s) | 939 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 494 |
| XapI | RAATTY | 1 cut(s) | 94 |
| XmiI | GTMKAC | 1 cut(s) | 303 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1172 |
| XspI | CTAG | 2 cut(s) | 540, 1214 |