Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011070

Physical Location & Seq

Genomic Coordinates Reverse (-)

21422175 .. 21424842

Gene Structure 2668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G255000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 798 bp

ATGGAACCATACAGCCAGAATGGAACCTGTGTGCACAGGGCAGGTCCAATCGGATTAAAAGACCAAAAACCCCAAGAGCATCCCAAGAAATCCGGGGCCTCAACAAGTTGGTTCCCTCTCACGTCCCCGCGATCCCCTGAAAACCCCGAAACCCCCGTGTACTCATCCGTCATTTCAATCCCACGAGGCTCCGCCTCCCAACCCTACACAAGATCTCTCTCCCTTCCCTCTCAACAAGTTTCATGCAAAAGCAGCCTCAAACTCGAACTGGGAAAAATGATAGAGCCCCTGAACGAGCACGAGCCCTGCTCCCCATCCTCCCTCAAGCAGAAACTCCGCTCCTCCCTCTGCATCATCCCGTGCTTCCCCAAAACGACGCCGCACCACCACTCCATCACCGCCCCCACCACCCCCCACGCCCACTCCGCCAACGTCAGCCTCGTCCGCAACTCCTCCTTCTCCTCCTCCAGCAAGTCCCGCTCTAGCCATCACCACAATCACCACCATCACCATCACGGCCATCACAACAGCCATTACGAGTTCGCGGAATTGAAGGACAAGTGCAAGAGCTTGATCGGGCGTATGGGACGGAGCCACACGGCGCGGAGGCACTCGGCCTCCGCCGACTTCAAATACGACCCCCTCAGCTACGCCCTCAATTTTGATCACGAGGAGGAGAACATCGAGGACTATCCCTTCAGGAGCTTCTCCGCCCGGTTGCCGCCCTCGCCGCCCCGAACCTTGCAGGACTCCGCCGCTTCTCCGTCTGCCTCTAAGGAAATAACTGCTTGTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

266

Amino Acids

29.36

Weight (kDa)

9.16

Isoelectric Point (pI)

69.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011070)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11070 AT5G35090
prunus_persica	Prupe.7G255000_v2.0.a1
pyrus_communis	pycom02g01220 pycom15g14380
rosa_chinensis	RchiOBHm_Chr2g0086701
rosa_laevigata	RLG00000015783 RLG00000031868
rosa_multiflora	Rmu_sc0004626.1_g000004
rosa_roxburghii	Rroxscaffold_1G00064680 Rroxscaffold_2G00154280
rosa_rugosa	Rorug01G0469000
rosa_samantha	Rh2AG021000 Rh2BG020900 Rh2CG021800 Rh2DG021600 Rh5BG087200 Rh5CG101100 Rh5DG087800
rosa_wichuraiana	Rw2G001700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	32
AccBSI	CCGCTC	2 cut(s)	339, 480
AccII	CGCG	3 cut(s)	130, 545, 604
AclWI	GGATC	1 cut(s)	126
AcoI	YGGCCR	1 cut(s)	517
AcuI	CTGAAG	1 cut(s)	682
AcyI	GRCGYC	1 cut(s)	377
AfaI	GTAC	1 cut(s)	161
AgsI	TTSAA	3 cut(s)	177, 553, 631
AjiI	CACGTC	1 cut(s)	123
AluBI	AGCT	3 cut(s)	570, 648, 705
AluI	AGCT	3 cut(s)	570, 648, 705
Alw21I	GWGCWC	2 cut(s)	36, 300
Alw44I	GTGCAC	1 cut(s)	32
AlwI	GGATC	1 cut(s)	126
AoxI	GGCC	3 cut(s)	96, 517, 615
ApaLI	GTGCAC	1 cut(s)	32
ApeKI	GCWGC	1 cut(s)	252
AspLEI	GCGC	1 cut(s)	604
AspS9I	GGNCC	2 cut(s)	44, 96
AsuC2I	CCSGG	2 cut(s)	94, 715
AsuHPI	GGTGA	4 cut(s)	388, 482, 491, 500
AvaII	GGWCC	1 cut(s)	44
BaeGI	GKGCMC	1 cut(s)	36
BanII	GRGCYC	2 cut(s)	288, 306
BauI	CACGAG	3 cut(s)	183, 299, 668
Bbv12I	GWGCWC	2 cut(s)	36, 300
BbvCI	CCTCAGC	1 cut(s)	644
BbvI	GCAGC	1 cut(s)	264
BccI	CCATC	6 cut(s)	322, 401, 495, 513, 519, 528
BceAI	ACGGC	2 cut(s)	532, 615
BclI	TGATCA	1 cut(s)	664
BcnI	CCSGG	2 cut(s)	94, 715
BfaI	CTAG	1 cut(s)	483
BfuAI	ACCTGC	1 cut(s)	32
BglII	AGATCT	1 cut(s)	212
BisI	GCNGC	5 cut(s)	253, 380, 722, 731, 756
BlsI	GCNGC	5 cut(s)	254, 381, 723, 732, 757
Bme1390I	CCNGG	2 cut(s)	94, 715
Bme18I	GGWCC	1 cut(s)	44
BmgBI	CACGTC	1 cut(s)	123
BmgT120I	GGNCC	2 cut(s)	44, 96
BmiI	GGNNCC	6 cut(s)	6, 25, 97, 113, 190, 593
BmrFI	CCNGG	2 cut(s)	94, 715
BmrI	ACTGGG	1 cut(s)	278
BmsI	GCATC	2 cut(s)	88, 360
BmuI	ACTGGG	1 cut(s)	278
BplI	GAGNNNNNCTC	2 cut(s)	293, 325
BpmI	CTGGAG	1 cut(s)	451
Bpu10I	CCTNAGC	1 cut(s)	644
BpuEI	CTTGAG	1 cut(s)	308
BpuMI	CCSGG	2 cut(s)	94, 715
BsaHI	GRCGYC	1 cut(s)	377
BsaJI	CCNNGG	1 cut(s)	93
BsaXI	ACNNNNNCTCC	6 cut(s)	374, 404, 407, 437, 602, 632
Bse1I	ACTGG	1 cut(s)	273
BseDI	CCNNGG	1 cut(s)	93
BseGI	GGATG	4 cut(s)	79, 164, 314, 354
BseMII	CTCAG	1 cut(s)	658
BseNI	ACTGG	1 cut(s)	273
BseRI	GAGGAG	6 cut(s)	331, 442, 451, 454, 686, 689
BseSI	GKGCMC	1 cut(s)	36
BseXI	GCAGC	1 cut(s)	264
Bsh1236I	CGCG	3 cut(s)	130, 545, 604
BshFI	GGCC	3 cut(s)	98, 519, 617
BsiHKAI	GWGCWC	2 cut(s)	36, 300
BsiSI	CCGG	2 cut(s)	93, 715
BslFI	GGGAC	3 cut(s)	109, 460, 600
BsmFI	GGGAC	3 cut(s)	109, 460, 600
BsnI	GGCC	3 cut(s)	98, 519, 617
Bsp1286I	GDGCHC	4 cut(s)	36, 288, 300, 306
Bsp143I	GATC	4 cut(s)	131, 212, 573, 664
BspANI	GGCC	3 cut(s)	98, 519, 617
BspCNI	CTCAG	1 cut(s)	657
BspFNI	CGCG	3 cut(s)	130, 545, 604
BspLI	GGNNCC	6 cut(s)	6, 25, 97, 113, 190, 593
BspMI	ACCTGC	1 cut(s)	32
BspPI	GGATC	1 cut(s)	126
BsrBI	CCGCTC	2 cut(s)	339, 480
BsrI	ACTGG	1 cut(s)	273
BssECI	CCNNGG	1 cut(s)	93
BssMI	GATC	4 cut(s)	131, 212, 573, 664
BssNI	GRCGYC	1 cut(s)	377
BssSI	CACGAG	3 cut(s)	183, 299, 668
Bst2BI	CACGAG	3 cut(s)	183, 299, 668
BstACI	GRCGYC	1 cut(s)	377
BstDEI	CTNAG	2 cut(s)	644, 774
BstF5I	GGATG	4 cut(s)	79, 164, 314, 354
BstFNI	CGCG	3 cut(s)	130, 545, 604
BstHHI	GCGC	1 cut(s)	604
BstKTI	GATC	4 cut(s)	134, 215, 576, 667
BstMBI	GATC	4 cut(s)	131, 212, 573, 664
BstMWI	GCNNNNNNNGC	6 cut(s)	252, 425, 444, 477, 727, 730
BstSCI	CCNGG	2 cut(s)	92, 713
BstSLI	GKGCMC	1 cut(s)	36
BstUI	CGCG	3 cut(s)	130, 545, 604
BstV1I	GCAGC	1 cut(s)	264
BstX2I	RGATCY	1 cut(s)	212
BstYI	RGATCY	1 cut(s)	212
BsuRI	GGCC	3 cut(s)	98, 519, 617
BtrI	CACGTC	1 cut(s)	123
BtsCI	GGATG	4 cut(s)	79, 164, 314, 354
BveI	ACCTGC	1 cut(s)	32
CfoI	GCGC	1 cut(s)	604
Cfr13I	GGNCC	2 cut(s)	44, 96
CseI	GACGC	1 cut(s)	385
Csp6I	GTAC	1 cut(s)	160
CviAII	CATG	1 cut(s)	243
CviQI	GTAC	1 cut(s)	160
DdeI	CTNAG	2 cut(s)	644, 774
DpnI	GATC	4 cut(s)	133, 214, 575, 666
DpnII	GATC	4 cut(s)	131, 212, 573, 664
EaeI	YGGCCR	1 cut(s)	517
EciI	GGCGGA	5 cut(s)	181, 415, 610, 700, 742
Eco24I	GRGCYC	2 cut(s)	288, 306
Eco47I	GGWCC	1 cut(s)	44
Eco57I	CTGAAG	1 cut(s)	682
EcoO109I	RGGNCCY	1 cut(s)	96
EcoT38I	GRGCYC	2 cut(s)	288, 306
FaeI	CATG	1 cut(s)	246
FaiI	YATR	3 cut(s)	10, 244, 584
FaqI	GGGAC	3 cut(s)	109, 460, 600
FatI	CATG	1 cut(s)	242
FauI	CCCGC	2 cut(s)	135, 485
FbaI	TGATCA	1 cut(s)	664
Fnu4HI	GCNGC	5 cut(s)	253, 380, 722, 731, 756
FokI	GGATG	4 cut(s)	66, 151, 301, 341
FriOI	GRGCYC	2 cut(s)	288, 306
Fsp4HI	GCNGC	5 cut(s)	253, 380, 722, 731, 756
FspBI	CTAG	1 cut(s)	483
GlaI	GCGC	1 cut(s)	603
GluI	GCNGC	5 cut(s)	253, 380, 722, 731, 756
GsuI	CTGGAG	1 cut(s)	451
HaeIII	GGCC	3 cut(s)	98, 519, 617
HapII	CCGG	2 cut(s)	93, 715
HgaI	GACGC	1 cut(s)	385
HhaI	GCGC	1 cut(s)	604
Hin1I	GRCGYC	1 cut(s)	377
Hin1II	CATG	1 cut(s)	246
Hin6I	GCGC	1 cut(s)	602
HinP1I	GCGC	1 cut(s)	602
HinfI	GANTC	1 cut(s)	749
HpaII	CCGG	2 cut(s)	93, 715
HphI	GGTGA	4 cut(s)	388, 482, 491, 500
Hpy166II	GTNNAC	2 cut(s)	34, 160
Hpy188I	TCNGA	1 cut(s)	53
Hpy188III	TCNNGA	2 cut(s)	668, 700
Hpy8I	GTNNAC	2 cut(s)	34, 160
Hpy99I	CGWCG	1 cut(s)	379
HpyAV	CCTTC	4 cut(s)	233, 466, 547, 706
HpyCH4IV	ACGT	2 cut(s)	122, 432
HpyCH4V	TGCA	5 cut(s)	34, 246, 351, 564, 745
HpyF10VI	GCNNNNNNNGC	6 cut(s)	252, 425, 444, 477, 727, 730
HpyF3I	CTNAG	2 cut(s)	644, 774
HpySE526I	ACGT	2 cut(s)	122, 432
Hsp92I	GRCGYC	1 cut(s)	377
Hsp92II	CATG	1 cut(s)	246
HspAI	GCGC	1 cut(s)	602
Ksp22I	TGATCA	1 cut(s)	664
Kzo9I	GATC	4 cut(s)	131, 212, 573, 664
LmnI	GCTCC	5 cut(s)	194, 314, 344, 591, 702
Lsp1109I	GCAGC	1 cut(s)	264
LweI	GCATC	2 cut(s)	88, 360
MaeI	CTAG	1 cut(s)	483
MaeII	ACGT	2 cut(s)	122, 432
MalI	GATC	4 cut(s)	133, 214, 575, 666
MbiI	CCGCTC	2 cut(s)	339, 480
MboI	GATC	4 cut(s)	131, 212, 573, 664
MflI	RGATCY	1 cut(s)	212
MhlI	GDGCHC	4 cut(s)	36, 288, 300, 306
MluCI	AATT	2 cut(s)	548, 658
MlyI	GAGTC	1 cut(s)	743
MseI	TTAA	1 cut(s)	56
MspI	CCGG	2 cut(s)	93, 715
MspR9I	CCNGG	2 cut(s)	94, 715
MvnI	CGCG	3 cut(s)	130, 545, 604
MwoI	GCNNNNNNNGC	6 cut(s)	252, 425, 444, 477, 727, 730
NciI	CCSGG	2 cut(s)	94, 715
NdeII	GATC	4 cut(s)	131, 212, 573, 664
NlaIII	CATG	1 cut(s)	246
NlaIV	GGNNCC	6 cut(s)	6, 25, 97, 113, 190, 593
NmeAIII	GCCGAG	1 cut(s)	593
PcsI	WCGNNNNNNNCGW	1 cut(s)	438
PkrI	GCNGC	5 cut(s)	254, 381, 723, 732, 757
PleI	GAGTC	1 cut(s)	743
PpsI	GAGTC	1 cut(s)	743
PspN4I	GGNNCC	6 cut(s)	6, 25, 97, 113, 190, 593
PspPI	GGNCC	2 cut(s)	44, 96
PsuI	RGATCY	1 cut(s)	212
RsaI	GTAC	1 cut(s)	161
RsaNI	GTAC	1 cut(s)	160
SaqAI	TTAA	1 cut(s)	56
SatI	GCNGC	5 cut(s)	253, 380, 722, 731, 756
Sau3AI	GATC	4 cut(s)	131, 212, 573, 664
Sau96I	GGNCC	2 cut(s)	44, 96
SchI	GAGTC	1 cut(s)	743
ScrFI	CCNGG	2 cut(s)	94, 715
SduI	GDGCHC	4 cut(s)	36, 288, 300, 306
SetI	ASST	8 cut(s)	29, 46, 125, 435, 572, 650, 707, 743
SfaNI	GCATC	2 cut(s)	88, 360
SinI	GGWCC	1 cut(s)	44
SmlI	CTYRAG	1 cut(s)	323
SmoI	CTYRAG	1 cut(s)	323
Sse9I	AATT	2 cut(s)	548, 658
SspMI	CTAG	1 cut(s)	483
StyD4I	CCNGG	2 cut(s)	92, 713
TaiI	ACGT	2 cut(s)	125, 435
TaqI	TCGA	2 cut(s)	264, 684
TasI	AATT	2 cut(s)	548, 658
TatI	WGTACW	1 cut(s)	159
TauI	GCSGC	4 cut(s)	382, 724, 733, 758
Tru1I	TTAA	1 cut(s)	56
Tru9I	TTAA	1 cut(s)	56
TseI	GCWGC	1 cut(s)	252
TspDTI	ATGAA	1 cut(s)	231
TspGWI	ACGGA	3 cut(s)	157, 604, 753
VneI	GTGCAC	1 cut(s)	32
VpaK11BI	GGWCC	1 cut(s)	44
XspI	CTAG	1 cut(s)	483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.