Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006537

Physical Location & Seq

Genomic Coordinates Reverse (-)

22144641 .. 22149002

Gene Structure 4362 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G269700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGACAGCACCTTTGAGGCTTTTCTTGCCTCTAACCACCATTACTGCCTATTCTTCTTCTTCAGACTTTCCCTCCAAGTCCCTCAAATCCTTTCACTCTGCAAGCCCTAATTTCAAGCTTTCCTACTCTTCCTCTCTCTCATCTCACCAACACACATGTACTGGAAACAAGACACCCATTCGCTCCAAGCGGAAGTGGCTCTGCGGACATATGAGAAGAGATCAAGACATAGATAGTCCATCAAATGAAGACAATAAGGGTGCGAGTATGTTCGGTTCTGATGAAGAAGTAGGCACCCAAATCCCAACCCAAGCTCAATCTGTTGTTGAAGGATCAGGAGCAGTTCTGGTATCAGAGTTTAGACCTGTGGCCGATGTTGATTATCTACAGGAATTATTAGCCATTCAGCAACAAGGGCCCCGAGCAATTGGCTTCTTTGGGACTCGTAATATGGGATTCATGCATCAAGAACTTATCGAGATTCTTAGCTATGCGATGGTTATCACTAAAAATCACATATATACATCAGGGGCATCTGGCACTAATGCAGCTGTTATCAGGGGTGCTCTCAGAGCAGAGAAACCGGAATTACTTACGGTAATCTTGCCGCAAAGCTTGAAGAAGCAACCTCCTGAGAGCCAGGAATTATTGTCTAAAGTCAAGAATGTGATAGAGAAGCCTTACAATGATCATCTACCTCTGTTAGAAGCCAGCAGGTTGTGCAATATGGACATCATTTCACATGTACAACAAGTTATATGCTTTGCGTTTCATGATAGTAAATTGCTCATGGAAACTTGTCAAGAGGCCAAAAATCTCCGGAAAATCGTGACTCTCTTCTATCTAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

284

Amino Acids

31.46

Weight (kDa)

7.69

Isoelectric Point (pI)

52.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006537)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43945 AT3G59870
fragaria_vesca	FvH4_1g00160 FvH4_1g00160 FvH4_1g00160 FvH4_1g00160
malus_domestica	MD00G1087500.v1.1 MD15G1143300.v1.1
prunus_persica	Prupe.7G269700_v2.0.a1 Prupe.7G269700_v2.0.a1
pyrus_communis	pycom15g12940 pycom290g00220
rosa_chinensis	RchiOBHm_Chr2g0084451
rosa_laevigata	RLG00000015619
rosa_multiflora	Rmu_co8449065.1_g000001 Rmu_sc0009404.1_g000003
rosa_roxburghii	Rroxscaffold_2G00156050
rosa_rugosa	Rorug01G0454100 Rorug01G0454100 Rorug01G0454100 Rorug01G0454100
rosa_samantha	Rh2AG002200 Rh2BG001800 Rh2CG002100 Rh2DG002300
rosa_wichuraiana	Rw2G000190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	705
AccB1I	GGYRCC	1 cut(s)	293
AccIII	TCCGGA	1 cut(s)	819
AciI	CCGC	3 cut(s)	190, 204, 608
AclWI	GGATC	1 cut(s)	340
AcoI	YGGCCR	1 cut(s)	369
AcuI	CTGAAG	1 cut(s)	45
AfaI	GTAC	2 cut(s)	160, 747
AflIII	ACRYGT	2 cut(s)	155, 742
AgsI	TTSAA	3 cut(s)	115, 329, 619
AjnI	CCWGG	1 cut(s)	639
AluBI	AGCT	5 cut(s)	118, 314, 489, 551, 615
AluI	AGCT	5 cut(s)	118, 314, 489, 551, 615
Alw21I	GWGCWC	1 cut(s)	568
AlwI	GGATC	1 cut(s)	340
Ama87I	CYCGRG	1 cut(s)	420
Aor13HI	TCCGGA	1 cut(s)	819
AoxI	GGCC	3 cut(s)	369, 416, 807
ApaI	GGGCCC	1 cut(s)	420
ApeKI	GCWGC	1 cut(s)	548
ArsI	GACNNNNNNTTYG	1 cut(s)	27
AspS9I	GGNCC	2 cut(s)	416, 417
AsuHPI	GGTGA	1 cut(s)	137
AvaI	CYCGRG	1 cut(s)	420
BaeGI	GKGCMC	1 cut(s)	420
BanI	GGYRCC	1 cut(s)	293
BanII	GRGCYC	1 cut(s)	420
BbsI	GAAGAC	1 cut(s)	255
Bbv12I	GWGCWC	1 cut(s)	568
BbvI	GCAGC	1 cut(s)	560
BccI	CCATC	2 cut(s)	247, 490
BciT130I	CCWGG	1 cut(s)	641
BclI	TGATCA	1 cut(s)	688
BfaI	CTAG	1 cut(s)	845
BfmI	CTRYAG	1 cut(s)	386
BfuAI	ACCTGC	1 cut(s)	705
BisI	GCNGC	2 cut(s)	549, 608
BlsI	GCNGC	2 cut(s)	550, 609
Bme1390I	CCNGG	1 cut(s)	641
BmeT110I	CYCGRG	1 cut(s)	420
BmgT120I	GGNCC	2 cut(s)	416, 417
BmiI	GGNNCC	3 cut(s)	295, 418, 419
BmrFI	CCNGG	1 cut(s)	641
BmsI	GCATC	2 cut(s)	472, 542
BpiI	GAAGAC	1 cut(s)	255
BsaBI	GATNNNNATC	1 cut(s)	500
BsaWI	WCCGGW	2 cut(s)	583, 819
BsaXI	ACNNNNNCTCC	2 cut(s)	56, 86
Bse1I	ACTGG	1 cut(s)	166
Bse8I	GATNNNNATC	1 cut(s)	500
BseAI	TCCGGA	1 cut(s)	819
BseBI	CCWGG	1 cut(s)	641
BseJI	GATNNNNATC	1 cut(s)	500
BseMII	CTCAG	2 cut(s)	583, 624
BseNI	ACTGG	1 cut(s)	166
BseSI	GKGCMC	1 cut(s)	420
BseXI	GCAGC	1 cut(s)	560
BshFI	GGCC	3 cut(s)	371, 418, 809
BshNI	GGYRCC	1 cut(s)	293
BsiHKAI	GWGCWC	1 cut(s)	568
BsiHKCI	CYCGRG	1 cut(s)	420
BsiSI	CCGG	2 cut(s)	584, 820
BslFI	GGGAC	2 cut(s)	64, 454
BsmFI	GGGAC	2 cut(s)	64, 454
BsnI	GGCC	3 cut(s)	371, 418, 809
BsoBI	CYCGRG	1 cut(s)	420
Bsp120I	GGGCCC	1 cut(s)	416
Bsp1286I	GDGCHC	2 cut(s)	420, 568
Bsp13I	TCCGGA	1 cut(s)	819
Bsp1407I	TGTACA	1 cut(s)	745
Bsp143I	GATC	3 cut(s)	220, 332, 688
BspACI	CCGC	3 cut(s)	190, 204, 608
BspANI	GGCC	3 cut(s)	371, 418, 809
BspCNI	CTCAG	2 cut(s)	582, 625
BspEI	TCCGGA	1 cut(s)	819
BspHI	TCATGA	1 cut(s)	772
BspLI	GGNNCC	3 cut(s)	295, 418, 419
BspMI	ACCTGC	1 cut(s)	705
BspPI	GGATC	1 cut(s)	340
BspT107I	GGYRCC	1 cut(s)	293
BsrGI	TGTACA	1 cut(s)	745
BsrI	ACTGG	1 cut(s)	166
BssMI	GATC	3 cut(s)	220, 332, 688
Bst2UI	CCWGG	1 cut(s)	641
Bst4CI	ACNGT	1 cut(s)	598
Bst6I	CTCTTC	3 cut(s)	133, 211, 842
BstAPI	GCANNNNNTGC	1 cut(s)	720
BstAUI	TGTACA	1 cut(s)	745
BstC8I	GCNNGC	2 cut(s)	103, 712
BstDEI	CTNAG	3 cut(s)	485, 569, 633
BstKTI	GATC	3 cut(s)	223, 335, 691
BstMBI	GATC	3 cut(s)	220, 332, 688
BstMWI	GCNNNNNNNGC	5 cut(s)	25, 196, 415, 572, 720
BstNI	CCWGG	1 cut(s)	641
BstNSI	RCATGY	2 cut(s)	159, 746
BstSCI	CCNGG	1 cut(s)	639
BstSFI	CTRYAG	1 cut(s)	386
BstSLI	GKGCMC	1 cut(s)	420
BstV1I	GCAGC	1 cut(s)	560
BstV2I	GAAGAC	1 cut(s)	255
BsuRI	GGCC	3 cut(s)	371, 418, 809
BtgZI	GCGATG	1 cut(s)	509
BveI	ACCTGC	1 cut(s)	705
Cac8I	GCNNGC	2 cut(s)	103, 712
CciI	TCATGA	1 cut(s)	772
Cfr13I	GGNCC	2 cut(s)	416, 417
Csp6I	GTAC	2 cut(s)	159, 746
CviAII	CATG	5 cut(s)	156, 460, 743, 773, 790
CviQI	GTAC	2 cut(s)	159, 746
DdeI	CTNAG	3 cut(s)	485, 569, 633
DpnI	GATC	3 cut(s)	222, 334, 690
DpnII	GATC	3 cut(s)	220, 332, 688
EaeI	YGGCCR	1 cut(s)	369
Eam1104I	CTCTTC	3 cut(s)	133, 211, 842
EarI	CTCTTC	3 cut(s)	133, 211, 842
Eco24I	GRGCYC	1 cut(s)	420
Eco57I	CTGAAG	1 cut(s)	45
Eco88I	CYCGRG	1 cut(s)	420
EcoO109I	RGGNCCY	2 cut(s)	416, 417
EcoRII	CCWGG	1 cut(s)	639
EcoT22I	ATGCAT	1 cut(s)	465
EcoT38I	GRGCYC	1 cut(s)	420
FaeI	CATG	5 cut(s)	159, 463, 746, 776, 793
FaqI	GGGAC	2 cut(s)	64, 454
FatI	CATG	5 cut(s)	155, 459, 742, 772, 789
FauNDI	CATATG	1 cut(s)	210
FbaI	TGATCA	1 cut(s)	688
Fnu4HI	GCNGC	2 cut(s)	549, 608
FriOI	GRGCYC	1 cut(s)	420
Fsp4HI	GCNGC	2 cut(s)	549, 608
FspBI	CTAG	1 cut(s)	845
GluI	GCNGC	2 cut(s)	549, 608
HaeIII	GGCC	3 cut(s)	371, 418, 809
HapII	CCGG	2 cut(s)	584, 820
Hin1II	CATG	5 cut(s)	159, 463, 746, 776, 793
HindIII	AAGCTT	2 cut(s)	116, 613
HinfI	GANTC	4 cut(s)	442, 456, 481, 832
HpaII	CCGG	2 cut(s)	584, 820
HphI	GGTGA	1 cut(s)	137
Hpy188I	TCNGA	4 cut(s)	64, 280, 355, 572
HpyAV	CCTTC	1 cut(s)	323
HpyCH4III	ACNGT	1 cut(s)	598
HpyCH4V	TGCA	4 cut(s)	101, 463, 548, 723
HpyF10VI	GCNNNNNNNGC	5 cut(s)	25, 196, 415, 572, 720
HpyF3I	CTNAG	3 cut(s)	485, 569, 633
Hsp92II	CATG	5 cut(s)	159, 463, 746, 776, 793
Kpn2I	TCCGGA	1 cut(s)	819
Ksp22I	TGATCA	1 cut(s)	688
Kzo9I	GATC	3 cut(s)	220, 332, 688
LmnI	GCTCC	2 cut(s)	188, 338
Lsp1109I	GCAGC	1 cut(s)	560
LweI	GCATC	2 cut(s)	472, 542
MaeI	CTAG	1 cut(s)	845
MaeIII	GTNAC	1 cut(s)	829
MalI	GATC	3 cut(s)	222, 334, 690
MboI	GATC	3 cut(s)	220, 332, 688
MboII	GAAGA	9 cut(s)	45, 48, 51, 120, 228, 260, 296, 631, 829
MfeI	CAATTG	1 cut(s)	426
MhlI	GDGCHC	2 cut(s)	420, 568
MluCI	AATT	6 cut(s)	109, 392, 426, 587, 644, 782
MlyI	GAGTC	2 cut(s)	436, 826
MnlI	CCTC	8 cut(s)	9, 39, 82, 92, 142, 639, 708, 799
Mph1103I	ATGCAT	1 cut(s)	465
MroI	TCCGGA	1 cut(s)	819
MspA1I	CMGCKG	1 cut(s)	551
MspI	CCGG	2 cut(s)	584, 820
MspR9I	CCNGG	1 cut(s)	641
MunI	CAATTG	1 cut(s)	426
MvaI	CCWGG	1 cut(s)	641
MwoI	GCNNNNNNNGC	5 cut(s)	25, 196, 415, 572, 720
NdeI	CATATG	1 cut(s)	210
NdeII	GATC	3 cut(s)	220, 332, 688
NlaIII	CATG	5 cut(s)	159, 463, 746, 776, 793
NlaIV	GGNNCC	3 cut(s)	295, 418, 419
NmuCI	GTSAC	1 cut(s)	829
NsiI	ATGCAT	1 cut(s)	465
NspI	RCATGY	2 cut(s)	159, 746
PagI	TCATGA	1 cut(s)	772
PciI	ACATGT	2 cut(s)	155, 742
PfeI	GAWTC	2 cut(s)	456, 481
PkrI	GCNGC	2 cut(s)	550, 609
PleI	GAGTC	2 cut(s)	436, 826
PpsI	GAGTC	2 cut(s)	436, 826
PscI	ACATGT	2 cut(s)	155, 742
Psp6I	CCWGG	1 cut(s)	639
PspGI	CCWGG	1 cut(s)	639
PspN4I	GGNNCC	3 cut(s)	295, 418, 419
PspOMI	GGGCCC	1 cut(s)	416
PspPI	GGNCC	2 cut(s)	416, 417
PsrI	GAACNNNNNNTAC	2 cut(s)	259, 291
PvuII	CAGCTG	1 cut(s)	551
RsaI	GTAC	2 cut(s)	160, 747
RsaNI	GTAC	2 cut(s)	159, 746
SatI	GCNGC	2 cut(s)	549, 608
Sau3AI	GATC	3 cut(s)	220, 332, 688
Sau96I	GGNCC	2 cut(s)	416, 417
SchI	GAGTC	2 cut(s)	436, 826
ScrFI	CCNGG	1 cut(s)	641
SduI	GDGCHC	2 cut(s)	420, 568
SfaNI	GCATC	2 cut(s)	472, 542
SfcI	CTRYAG	1 cut(s)	386
Sse9I	AATT	6 cut(s)	109, 392, 426, 587, 644, 782
SsiI	CCGC	3 cut(s)	190, 204, 608
SspMI	CTAG	1 cut(s)	845
StyD4I	CCNGG	1 cut(s)	639
TaaI	ACNGT	1 cut(s)	598
TaqI	TCGA	1 cut(s)	477
TasI	AATT	6 cut(s)	109, 392, 426, 587, 644, 782
TatI	WGTACW	2 cut(s)	158, 745
TauI	GCSGC	1 cut(s)	610
TfiI	GAWTC	2 cut(s)	456, 481
TseFI	GTSAC	1 cut(s)	829
TseI	GCWGC	1 cut(s)	548
Tsp45I	GTSAC	1 cut(s)	829
TspDTI	ATGAA	4 cut(s)	261, 297, 448, 761
XbaI	TCTAGA	1 cut(s)	844
XceI	RCATGY	2 cut(s)	159, 746
XspI	CTAG	1 cut(s)	845
Zsp2I	ATGCAT	1 cut(s)	465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.