Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0006537

Physical Location & Seq

Genomic Coordinates Reverse (-)

54871896 .. 54878255

Gene Structure 6360 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0454100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGGAGCAGAAGCACATTCTGTTGTCTGCTTTGAGTGTCGGGGTTGGAGTTGGAGTGGGTTTGGGGTTGAGTTCCGGCCACGCAGTGAGTAAATGGGTGAACGGAAACTGCTCGTCCGATGAGATGACGGCGGAGCAAATTGAGCAGGAGCTGATGAGGCAGGTTGTGGATATGAGAGACAGTAAGGTTACATTTGAGGAGTTTCCTTATTATCTAAGGGAAAGAACTCGGATGTTATTAACAAGTGCTGCATATGTACATCTGAAACACTCTGACTTATCTAAACACACCCGGAACCTTTCACCTGCAAGCAGAGCTATTTTGCTATCAGGACCTGCAGAACTTTATCATCAAATGCTCGCCAAGGCTTTAGCTCATCTCTTTGAATCGAAGTTGCTGTTGTTGGATGTTACTGACTTTTCAATGAAGATGCAGAGCAAATATGGGTGTACCAAAAAAGAATCATTTAAGAGGCCCATCTCAGAGGTAACATTGGAGCGGATGTCTGGATTGTTTGGATCCTTCTCAATCCTCCCTTCAAGTGGAGAGACTAAAGGCACCTTATTACGGCCAAGCAGTGCTGCAGATCTCATATCAAGGAGTTCTGAAGGATCAACTAACCGTAGGACACTTAAAAGAAATGCCTCTTCTGTATCTGATATCAGTAGCATCAGTTCCAAAAGTGCTTCCACAAATTCAGCTCCTCTCAAGCGAATGAGTAGCTGGTGTTTTGACGAGAGACTTTTTCTACAATCACTTTACAAGGTCTTAACGTCCCTATCAGAAAGTGGCTCGATCATTTTATACCTCAGGGATGTGGAGAAGCTTTTTCTCCAATCAGGACGGTTATACAATTTGTTCAGTAAAATGTTGAAGAAACTATCAGGATCCGTGTTAATACTTGGTTCCCGAATGTTAGATGCTGAAGATGATTGCAAAGAAGTAGATGAGAGGCTTGCTGCTTTGTTCACTTACAATATTGAGATCACCCCACCTGACGATGAGACTCATCTCGTCAGCTGGAAAGCCCAACTGGAAGAGGACACGAAGAGGATCCAGTTTCAAGATAATAAAAACCACATAGCTGAGGTACTTGCAGCAAATGATCTTGAATGTGATGATCTTGGTTCAATCTGCCATGCAGACACAATGGTTCTCAGCAATTACATAGAAGAAATCGTAGTTTCAGCGATATCGTATCATTTGATGAAAAACAAAGATCCAGAGTATCGTAATGGAAAGCTTGTTATATCATCAACGAGTTTGTCCCATGGGCTGAGTATATTCCAGGAGGGAAAATGTGGCGACAAAGATTCTCTGAAACTGGAGGCGTCCAACAAGGAAACTGAGGGGGAAGAGGCTGTCAGTGCAAAGACTGAATCGAAGTCTGAAACAGCGGAGAAATCTGACACCAAAAATGAAGCAGAGAAATCTGGTTCTGCAGCAAAGAAGGAAAGCGAGAATCCACCTCCACCAAAAGTTGAAGTTCCTCCAGACAATGAATTTGAGAAGCGGATAAGGCCAGAGGTTATCCCTGCAAATGAGATTGGAGTGTCCTTTGCAGATATTGGTGCATTGGATGAGATTAAAGAATCACTTCAGGAGTTAGTCATGCTCCCTCTTCGAAGACCAGACCTTTTCAAAGGAGGGCTCCTTAAGCCTTGTAGAGGCATACTGCTTTTTGGCCCTCCTGGTACTGGAAAAACAATGCTCGCAAAGGCCATTGCAAGTGAAGCGGGAGCAAGTTTCATCAACGTCTCCATGTCAACAATCACTTCAAAATGGTTTGGAGAAGACGAAAAGAATGTTCGAGCTCTCTTCACACTAGCAGCAAAGGTCTCGCCAACTATTATCTTTGTCGATGAGGTTGACAGCATGCTTGGGCAGAGAACTAGAGTTGGGGAGCATGAGGCGATGAGGAAGATTAAAAATGAGTTTATGGCCCACTGGGATGGACTCTTGACAAAGTCTGGAGAGCGTATACTTGTTCTTGCTGCAACCAACAGGCCATTTGATCTTGATGAAGCAATCATTAGGCGTTTTGAGCGCAGAGTCATGGTTGGCCTTCCCTCTGTTGAGAACAGGGAAATGATCTTGAAAACTCTTCTTGCAAAAGAAAAGGTCGAAGATTTAGACTTCAAGGAGCTCGCATCCATGACAGAAGGATATAGTGGAAGTGATCTTAAGAACTTATGTGTGACAGCAGCTTATCGACCTGTAAGGGAGCTTATACAACAGGAAAGATTGAAGGATAAGAAAAAAAAGAAGAAAGCCGAAGAAGGCAAAAGCACAGAAGATGCTTCAGACTCGAAAGAAGAAGAAGAGAAAGAGGAGCACGTAATTACTCTAAGGTCATTAAGCATGGAAGATATGAGGCAAGCAAAGAATCAGGTTGCTGCAAGTTTTGCTGCAGAGGGATCAGTAATGAGTGAGCTGAAACAGTGGAATGACTTGTATGGAGAAGGCGGCTCAAGGAAGAAGGAACAATTGACTTATTTCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

834

Amino Acids

92.91

Weight (kDa)

5.87

Isoelectric Point (pI)

44.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	370 - 430	3.5e-36	Domain of unknown function (DUF7751)
AAA	PF00004	558 - 688	8.8e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	710 - 751	5.6e-14	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006537)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43945 AT3G59870
fragaria_vesca	FvH4_1g00160 FvH4_1g00160 FvH4_1g00160 FvH4_1g00160
malus_domestica	MD00G1087500.v1.1 MD15G1143300.v1.1
prunus_persica	Prupe.7G269700_v2.0.a1 Prupe.7G269700_v2.0.a1
pyrus_communis	pycom15g12940 pycom290g00220
rosa_chinensis	RchiOBHm_Chr2g0084451
rosa_laevigata	RLG00000015619
rosa_multiflora	Rmu_co8449065.1_g000001 Rmu_sc0009404.1_g000003
rosa_roxburghii	Rroxscaffold_2G00156050
rosa_rugosa	Rorug01G0454100 Rorug01G0454100 Rorug01G0454100 Rorug01G0454100
rosa_samantha	Rh2AG002200 Rh2BG001800 Rh2CG002100 Rh2DG002300
rosa_wichuraiana	Rw2G000190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	313
Acc36I	ACCTGC	3 cut(s)	151, 313, 343
AccB1I	GGYRCC	1 cut(s)	557
AccBSI	CCGCTC	1 cut(s)	499
AccI	GTMKAC	1 cut(s)	1981
AciI	CCGC	6 cut(s)	131, 499, 1397, 1513, 1736, 2466
AclWI	GGATC	9 cut(s)	513, 526, 619, 882, 895, 1048, 1061, 1214, 2425
AcoI	YGGCCR	2 cut(s)	76, 569
AcsI	RAATTY	2 cut(s)	694, 1502
AcuI	CTGAAG	4 cut(s)	627, 945, 1583, 2286
AcyI	GRCGYC	1 cut(s)	1331
AdeI	CACNNNGTG	1 cut(s)	85
AfaI	GTAC	4 cut(s)	258, 451, 1092, 1696
AfiI	CCNNNNNNNGG	4 cut(s)	542, 567, 1667, 1697
AflII	CTTAAG	2 cut(s)	1655, 2183
AjnI	CCWGG	2 cut(s)	1287, 1690
Alw21I	GWGCWC	3 cut(s)	1816, 2148, 2337
Alw26I	GTCTC	6 cut(s)	171, 542, 733, 998, 1762, 1843
AlwI	GGATC	9 cut(s)	513, 526, 619, 882, 895, 1048, 1061, 1214, 2425
AlwNI	CAGNNNCTG	2 cut(s)	151, 335
AoxI	GGCC	9 cut(s)	76, 473, 569, 1520, 1684, 1719, 1941, 2006, 2062
ApoI	RAATTY	2 cut(s)	694, 1502
ArsI	GACNNNNNNTTYG	2 cut(s)	1487, 1519
Asp700I	GAANNNNTTC	1 cut(s)	1596
AspLEI	GCGC	1 cut(s)	2049
AspS9I	GGNCC	4 cut(s)	332, 474, 1685, 1942
AsuC2I	CCSGG	1 cut(s)	292
AsuHPI	GGTGA	3 cut(s)	109, 294, 979
AsuII	TTCGAA	1 cut(s)	1624
AvaII	GGWCC	1 cut(s)	332
AxyI	CCTNAGG	1 cut(s)	809
BamHI	GGATCC	3 cut(s)	518, 887, 1053
BanI	GGYRCC	1 cut(s)	557
BanII	GRGCYC	3 cut(s)	1653, 1816, 2148
BbsI	GAAGAC	2 cut(s)	1633, 1800
Bbv12I	GWGCWC	3 cut(s)	1816, 2148, 2337
BbvCI	CCTCAGC	1 cut(s)	1086
BccI	CCATC	2 cut(s)	485, 1946
BceAI	ACGGC	2 cut(s)	144, 584
BcgI	CGANNNNNNTGC	2 cut(s)	1821, 1855
BciT130I	CCWGG	2 cut(s)	1289, 1692
BcnI	CCSGG	1 cut(s)	292
BcoDI	GTCTC	6 cut(s)	171, 542, 733, 998, 1762, 1843
BfaI	CTAG	2 cut(s)	1826, 1893
BfmI	CTRYAG	4 cut(s)	336, 582, 1440, 2409
BfrI	CTTAAG	2 cut(s)	1655, 2183
BfuAI	ACCTGC	3 cut(s)	151, 313, 343
BglII	AGATCT	1 cut(s)	586
Bme1390I	CCNGG	3 cut(s)	292, 1289, 1692
Bme18I	GGWCC	1 cut(s)	332
BmgT120I	GGNCC	4 cut(s)	332, 474, 1685, 1942
BmiI	GGNNCC	7 cut(s)	296, 520, 559, 889, 907, 1055, 1652
BmrFI	CCNGG	3 cut(s)	292, 1289, 1692
BmrI	ACTGGG	1 cut(s)	1957
BmsI	GCATC	5 cut(s)	420, 678, 910, 2159, 2287
BmuI	ACTGGG	1 cut(s)	1957
BpiI	GAAGAC	2 cut(s)	1633, 1800
BpmI	CTGGAG	3 cut(s)	1346, 1476, 1992
Bpu10I	CCTNAGC	1 cut(s)	1086
Bpu14I	TTCGAA	1 cut(s)	1624
BpuEI	CTTGAG	2 cut(s)	692, 2455
BpuMI	CCSGG	1 cut(s)	292
BsaAI	YACGTR	1 cut(s)	2338
BsaHI	GRCGYC	1 cut(s)	1331
BsaI	GGTCTC	1 cut(s)	1843
BsaJI	CCNNGG	2 cut(s)	363, 1270
BsaXI	ACNNNNNCTCC	4 cut(s)	39, 69, 488, 518
Bsc4I	CCNNNNNNNGG	4 cut(s)	542, 567, 1667, 1697
Bse1I	ACTGG	5 cut(s)	1038, 1057, 1329, 1702, 1952
Bse21I	CCTNAGG	1 cut(s)	809
Bse3DI	GCAATG	1 cut(s)	1722
BseBI	CCWGG	2 cut(s)	1289, 1692
BseDI	CCNNGG	2 cut(s)	363, 1270
BseGI	GGATG	7 cut(s)	237, 412, 507, 820, 1585, 1957, 2150
BseLI	CCNNNNNNNGG	4 cut(s)	542, 567, 1667, 1697
BseMI	GCAATG	1 cut(s)	1722
BseMII	CTCAG	6 cut(s)	495, 823, 1077, 1171, 1268, 1338
BseNI	ACTGG	5 cut(s)	1038, 1057, 1329, 1702, 1952
BseRI	GAGGAG	3 cut(s)	212, 693, 2345
BshFI	GGCC	9 cut(s)	78, 475, 571, 1522, 1686, 1721, 1943, 2008, 2064
BshNI	GGYRCC	1 cut(s)	557
BsiHKAI	GWGCWC	3 cut(s)	1816, 2148, 2337
BsiSI	CCGG	2 cut(s)	75, 292
BslFI	GGGAC	2 cut(s)	760, 1252
BslI	CCNNNNNNNGG	4 cut(s)	542, 567, 1667, 1697
BsmAI	GTCTC	6 cut(s)	171, 542, 733, 998, 1762, 1843
BsmBI	CGTCTC	1 cut(s)	1762
BsmFI	GGGAC	2 cut(s)	760, 1252
BsnI	GGCC	9 cut(s)	78, 475, 571, 1522, 1686, 1721, 1943, 2008, 2064
Bso31I	GGTCTC	1 cut(s)	1843
Bsp119I	TTCGAA	1 cut(s)	1624
Bsp1286I	GDGCHC	4 cut(s)	1653, 1816, 2148, 2337
Bsp1407I	TGTACA	1 cut(s)	256
Bsp19I	CCATGG	1 cut(s)	1270
BspACI	CCGC	6 cut(s)	131, 499, 1397, 1513, 1736, 2466
BspANI	GGCC	9 cut(s)	78, 475, 571, 1522, 1686, 1721, 1943, 2008, 2064
BspCNI	CTCAG	6 cut(s)	494, 822, 1078, 1170, 1269, 1339
BspLI	GGNNCC	7 cut(s)	296, 520, 559, 889, 907, 1055, 1652
BspMAI	CTGCAG	4 cut(s)	340, 586, 1444, 2413
BspMI	ACCTGC	3 cut(s)	151, 313, 343
BspPI	GGATC	9 cut(s)	513, 526, 619, 882, 895, 1048, 1061, 1214, 2425
BspT104I	TTCGAA	1 cut(s)	1624
BspT107I	GGYRCC	1 cut(s)	557
BspTI	CTTAAG	2 cut(s)	1655, 2183
BspTNI	GGTCTC	1 cut(s)	1843
BsrBI	CCGCTC	1 cut(s)	499
BsrDI	GCAATG	1 cut(s)	1722
BsrGI	TGTACA	1 cut(s)	256
BsrI	ACTGG	5 cut(s)	1038, 1057, 1329, 1702, 1952
BssECI	CCNNGG	2 cut(s)	363, 1270
BssNAI	GTATAC	1 cut(s)	1982
BssNI	GRCGYC	1 cut(s)	1331
BssT1I	CCWWGG	2 cut(s)	363, 1270
Bst1107I	GTATAC	1 cut(s)	1982
Bst2UI	CCWGG	2 cut(s)	1289, 1692
Bst4CI	ACNGT	4 cut(s)	182, 623, 846, 2442
Bst6I	CTCTTC	8 cut(s)	652, 1032, 1043, 1350, 1626, 1823, 2109, 2316
BstACI	GRCGYC	1 cut(s)	1331
BstAFI	CTTAAG	2 cut(s)	1655, 2183
BstAPI	GCANNNNNTGC	1 cut(s)	2405
BstAUI	TGTACA	1 cut(s)	256
BstBAI	YACGTR	1 cut(s)	2338
BstBI	TTCGAA	1 cut(s)	1624
BstC8I	GCNNGC	7 cut(s)	310, 360, 957, 1713, 1877, 2148, 2379
BstDEI	CTNAG	8 cut(s)	215, 481, 809, 1086, 1157, 1277, 1347, 2348
BstDSI	CCRYGG	1 cut(s)	1270
BstENI	CCTNNNNNAGG	1 cut(s)	1665
BstF5I	GGATG	7 cut(s)	237, 412, 507, 820, 1585, 1957, 2150
BstHHI	GCGC	1 cut(s)	2049
BstMAI	GTCTC	6 cut(s)	171, 542, 733, 998, 1762, 1843
BstMWI	GCNNNNNNNGC	9 cut(s)	142, 157, 314, 1367, 1519, 1657, 1733, 2044, 2405
BstNI	CCWGG	2 cut(s)	1289, 1692
BstNSI	RCATGY	1 cut(s)	1879
BstSCI	CCNGG	3 cut(s)	290, 1287, 1690
BstSFI	CTRYAG	4 cut(s)	336, 582, 1440, 2409
BstV2I	GAAGAC	2 cut(s)	1633, 1800
BstX2I	RGATCY	5 cut(s)	518, 586, 887, 1053, 1219
BstXI	CCANNNNNNTGG	1 cut(s)	1952
BstYI	RGATCY	5 cut(s)	518, 586, 887, 1053, 1219
BstZ17I	GTATAC	1 cut(s)	1982
Bsu36I	CCTNAGG	1 cut(s)	809
BsuRI	GGCC	9 cut(s)	78, 475, 571, 1522, 1686, 1721, 1943, 2008, 2064
BtgI	CCRYGG	1 cut(s)	1270
BtgZI	GCGATG	1 cut(s)	1928
BtsCI	GGATG	7 cut(s)	237, 412, 507, 820, 1585, 1957, 2150
BtsI	GCAGTG	2 cut(s)	90, 583
BtsIMutI	CAGTG	5 cut(s)	90, 583, 1372, 1945, 2447
BveI	ACCTGC	3 cut(s)	151, 313, 343
Cac8I	GCNNGC	7 cut(s)	310, 360, 957, 1713, 1877, 2148, 2379
CaiI	CAGNNNCTG	2 cut(s)	151, 335
CfoI	GCGC	1 cut(s)	2049
Cfr13I	GGNCC	4 cut(s)	332, 474, 1685, 1942
CseI	GACGC	1 cut(s)	1320
Csp6I	GTAC	4 cut(s)	257, 450, 1091, 1695
CviAII	CATG	9 cut(s)	1139, 1271, 1612, 1762, 1876, 1907, 2056, 2155, 2362
CviQI	GTAC	4 cut(s)	257, 450, 1091, 1695
DdeI	CTNAG	8 cut(s)	215, 481, 809, 1086, 1157, 1277, 1347, 2348
DraIII	CACNNNGTG	1 cut(s)	85
EaeI	YGGCCR	2 cut(s)	76, 569
Eam1104I	CTCTTC	8 cut(s)	652, 1032, 1043, 1350, 1626, 1823, 2109, 2316
EarI	CTCTTC	8 cut(s)	652, 1032, 1043, 1350, 1626, 1823, 2109, 2316
EciI	GGCGGA	1 cut(s)	146
Ecl136II	GAGCTC	2 cut(s)	1814, 2146
Eco130I	CCWWGG	2 cut(s)	363, 1270
Eco24I	GRGCYC	3 cut(s)	1653, 1816, 2148
Eco31I	GGTCTC	1 cut(s)	1843
Eco32I	GATATC	2 cut(s)	661, 1194
Eco47I	GGWCC	1 cut(s)	332
Eco53kI	GAGCTC	2 cut(s)	1814, 2146
Eco57I	CTGAAG	4 cut(s)	627, 945, 1583, 2286
Eco81I	CCTNAGG	1 cut(s)	809
EcoICRI	GAGCTC	2 cut(s)	1814, 2146
EcoNI	CCTNNNNNAGG	1 cut(s)	1665
EcoO109I	RGGNCCY	1 cut(s)	332
EcoRII	CCWGG	2 cut(s)	1287, 1690
EcoRV	GATATC	2 cut(s)	661, 1194
EcoT14I	CCWWGG	2 cut(s)	363, 1270
EcoT38I	GRGCYC	3 cut(s)	1653, 1816, 2148
ErhI	CCWWGG	2 cut(s)	363, 1270
Esp3I	CGTCTC	1 cut(s)	1762
FaeI	CATG	9 cut(s)	1142, 1274, 1615, 1765, 1879, 1910, 2059, 2158, 2365
FalI	AAGNNNNNCTT	2 cut(s)	1581, 1613
FaqI	GGGAC	2 cut(s)	760, 1252
FatI	CATG	9 cut(s)	1138, 1270, 1611, 1761, 1875, 1906, 2055, 2154, 2361
FauI	CCCGC	1 cut(s)	1729
FauNDI	CATATG	1 cut(s)	253
FblI	GTMKAC	1 cut(s)	1981
FokI	GGATG	7 cut(s)	244, 419, 514, 827, 1592, 1964, 2137
FriOI	GRGCYC	3 cut(s)	1653, 1816, 2148
FspBI	CTAG	2 cut(s)	1826, 1893
GlaI	GCGC	1 cut(s)	2048
GsuI	CTGGAG	3 cut(s)	1346, 1476, 1992
HaeIII	GGCC	9 cut(s)	78, 475, 571, 1522, 1686, 1721, 1943, 2008, 2064
HapII	CCGG	2 cut(s)	75, 292
HgaI	GACGC	1 cut(s)	1320
HhaI	GCGC	1 cut(s)	2049
Hin1I	GRCGYC	1 cut(s)	1331
Hin1II	CATG	9 cut(s)	1142, 1274, 1615, 1765, 1879, 1910, 2059, 2158, 2365
Hin6I	GCGC	1 cut(s)	2047
HinP1I	GCGC	1 cut(s)	2047
HincII	GTYRAC	2 cut(s)	1767, 1870
HindII	GTYRAC	2 cut(s)	1767, 1870
HindIII	AAGCTT	2 cut(s)	824, 1241
HpaII	CCGG	2 cut(s)	75, 292
HphI	GGTGA	3 cut(s)	109, 294, 979
Hpy166II	GTNNAC	6 cut(s)	100, 450, 969, 1767, 1870, 1982
Hpy8I	GTNNAC	6 cut(s)	100, 450, 969, 1767, 1870, 1982
HpyCH4III	ACNGT	4 cut(s)	182, 623, 846, 2442
HpyCH4IV	ACGT	3 cut(s)	773, 1755, 2337
HpyF10VI	GCNNNNNNNGC	9 cut(s)	142, 157, 314, 1367, 1519, 1657, 1733, 2044, 2405
HpyF3I	CTNAG	8 cut(s)	215, 481, 809, 1086, 1157, 1277, 1347, 2348
HpySE526I	ACGT	3 cut(s)	773, 1755, 2337
Hsp92I	GRCGYC	1 cut(s)	1331
Hsp92II	CATG	9 cut(s)	1142, 1274, 1615, 1765, 1879, 1910, 2059, 2158, 2365
HspAI	GCGC	1 cut(s)	2047
LweI	GCATC	5 cut(s)	420, 678, 910, 2159, 2287
MaeI	CTAG	2 cut(s)	1826, 1893
MaeII	ACGT	3 cut(s)	773, 1755, 2337
MaeIII	GTNAC	4 cut(s)	187, 409, 487, 2197
MbiI	CCGCTC	1 cut(s)	499
MfeI	CAATTG	1 cut(s)	2486
MflI	RGATCY	5 cut(s)	518, 586, 887, 1053, 1219
MhlI	GDGCHC	4 cut(s)	1653, 1816, 2148, 2337
MluCI	AATT	7 cut(s)	138, 694, 853, 1162, 1502, 2340, 2486
MlyI	GAGTC	4 cut(s)	1000, 1950, 2061, 2300
MmeI	TCCRAC	4 cut(s)	25, 31, 384, 1359
MroXI	GAANNNNTTC	1 cut(s)	1596
MslI	CAYNNNNRTG	1 cut(s)	1950
MspA1I	CMGCKG	2 cut(s)	1020, 1397
MspCI	CTTAAG	2 cut(s)	1655, 2183
MspI	CCGG	2 cut(s)	75, 292
MspR9I	CCNGG	3 cut(s)	292, 1289, 1692
MunI	CAATTG	1 cut(s)	2486
MvaI	CCWGG	2 cut(s)	1289, 1692
MwoI	GCNNNNNNNGC	9 cut(s)	142, 157, 314, 1367, 1519, 1657, 1733, 2044, 2405
NciI	CCSGG	1 cut(s)	292
NcoI	CCATGG	1 cut(s)	1270
NdeI	CATATG	1 cut(s)	253
NlaIII	CATG	9 cut(s)	1142, 1274, 1615, 1765, 1879, 1910, 2059, 2158, 2365
NlaIV	GGNNCC	7 cut(s)	296, 520, 559, 889, 907, 1055, 1652
NmuCI	GTSAC	1 cut(s)	2197
NspI	RCATGY	1 cut(s)	1879
NspV	TTCGAA	1 cut(s)	1624
PaeI	GCATGC	1 cut(s)	1879
PaqCI	CACCTGC	1 cut(s)	313
PdmI	GAANNNNTTC	1 cut(s)	1596
PfeI	GAWTC	7 cut(s)	386, 461, 1313, 1379, 1462, 1592, 2386
PflFI	GACNNNGTC	1 cut(s)	1966
PfoI	TCCNGGA	1 cut(s)	1287
PleI	GAGTC	4 cut(s)	1000, 1950, 2060, 2300
PpsI	GAGTC	4 cut(s)	1000, 1950, 2060, 2300
Ppu21I	YACGTR	1 cut(s)	2338
PpuMI	RGGWCCY	1 cut(s)	332
Psp124BI	GAGCTC	2 cut(s)	1816, 2148
Psp5II	RGGWCCY	1 cut(s)	332
Psp6I	CCWGG	2 cut(s)	1287, 1690
PspGI	CCWGG	2 cut(s)	1287, 1690
PspN4I	GGNNCC	7 cut(s)	296, 520, 559, 889, 907, 1055, 1652
PspPI	GGNCC	4 cut(s)	332, 474, 1685, 1942
PspPPI	RGGWCCY	1 cut(s)	332
PsrI	GAACNNNNNNTAC	2 cut(s)	658, 690
PstI	CTGCAG	4 cut(s)	340, 586, 1444, 2413
PstNI	CAGNNNCTG	2 cut(s)	151, 335
PsuI	RGATCY	5 cut(s)	518, 586, 887, 1053, 1219
PsyI	GACNNNGTC	1 cut(s)	1966
PvuII	CAGCTG	1 cut(s)	1020
RsaI	GTAC	4 cut(s)	258, 451, 1092, 1696
RsaNI	GTAC	4 cut(s)	257, 450, 1091, 1695
RseI	CAYNNNNRTG	1 cut(s)	1950
SacI	GAGCTC	2 cut(s)	1816, 2148
Sau96I	GGNCC	4 cut(s)	332, 474, 1685, 1942
SchI	GAGTC	4 cut(s)	1000, 1950, 2061, 2300
ScrFI	CCNGG	3 cut(s)	292, 1289, 1692
SduI	GDGCHC	4 cut(s)	1653, 1816, 2148, 2337
SfaNI	GCATC	5 cut(s)	420, 678, 910, 2159, 2287
SfcI	CTRYAG	4 cut(s)	336, 582, 1440, 2409
SfuI	TTCGAA	1 cut(s)	1624
SinI	GGWCC	1 cut(s)	332
SmiMI	CAYNNNNRTG	1 cut(s)	1950
SmlI	CTYRAG	4 cut(s)	707, 1655, 2183, 2470
SmoI	CTYRAG	4 cut(s)	707, 1655, 2183, 2470
SphI	GCATGC	1 cut(s)	1879
Sse9I	AATT	7 cut(s)	138, 694, 853, 1162, 1502, 2340, 2486
SsiI	CCGC	6 cut(s)	131, 499, 1397, 1513, 1736, 2466
SspI	AATATT	1 cut(s)	979
SspMI	CTAG	2 cut(s)	1826, 1893
SstI	GAGCTC	2 cut(s)	1816, 2148
StyD4I	CCNGG	3 cut(s)	290, 1287, 1690
StyI	CCWWGG	2 cut(s)	363, 1270
TaaI	ACNGT	4 cut(s)	182, 623, 846, 2442
TaiI	ACGT	3 cut(s)	776, 1758, 2340
TaqI	TCGA	9 cut(s)	389, 794, 1382, 1624, 1810, 1860, 2124, 2212, 2309
TasI	AATT	7 cut(s)	138, 694, 853, 1162, 1502, 2340, 2486
TatI	WGTACW	1 cut(s)	256
TauI	GCSGC	1 cut(s)	2469
TfiI	GAWTC	7 cut(s)	386, 461, 1313, 1379, 1462, 1592, 2386
TscAI	CASTG	5 cut(s)	90, 583, 1372, 1952, 2447
TseFI	GTSAC	1 cut(s)	2197
Tsp45I	GTSAC	1 cut(s)	2197
TspDTI	ATGAA	6 cut(s)	440, 1223, 1434, 1515, 1738, 2037
TspGWI	ACGGA	2 cut(s)	117, 880
TspRI	CASTG	5 cut(s)	90, 583, 1372, 1952, 2447
Tth111I	GACNNNGTC	1 cut(s)	1966
Vha464I	CTTAAG	2 cut(s)	1655, 2183
VpaK11BI	GGWCC	1 cut(s)	332
XagI	CCTNNNNNAGG	1 cut(s)	1665
XapI	RAATTY	2 cut(s)	694, 1502
XceI	RCATGY	1 cut(s)	1879
XmiI	GTMKAC	1 cut(s)	1981
XmnI	GAANNNNTTC	1 cut(s)	1596
XspI	CTAG	2 cut(s)	1826, 1893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.