Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006599

Physical Location & Seq

Genomic Coordinates Reverse (-)

22150296 .. 22153209

Gene Structure 2914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G269800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1032 bp

ATGGCGGAGCCAATAATGATACCCAGCCTCCCGGGGAATCCAAACCCTAATTACCAGGGCCTACCAACTGCAAGTGTTGATCTTCCTCCTCCTCCTCCTCCTCCGTCTCCACCAGCCACAGGAGGTTCGAGGAGCCCCGTCATATTCAGCTTCCCGAAAAGGCCTTCTATTCGACTCACTTCCGAGTTCGACAGCGACTCGTCCGTTTTCTTCCATAAGGTCTCGTGCAAGCTGTTTGACAGCCTGGCCAAACTGAAGCTCTCCTTCCACAACAACCACAAGGGCGAGCTCTCTCCGCCCCACTTGGCACTTGTCTCCAAGCACCTCTCCATTAACTACGACTTTGAAGATCAATCTACTCTCCTCAGCGGCTCCGTCGATGTTGGTCCTCGATTGCAACTCCGTGCTACCCATGATCTCAAGGCACAACAAGGAGAGGCATCCGTGGTTGCGAAGCTTGCTGAACCTGGCTATGCATTTGAACTCTCTTCTCCTGTACCTTCTGTTGGTTTCCCAAAAGCTACCCTTAAATTCCCCCTTGGCGAAGTTTCTTTGGAGGAAAAAGAAGAAGAGGAGACGAAGAGAATGTTGTCGATCAATGGCATTGTGAAAGGCCAAATTTTGAATGGGTTGTGCACTGCTCATTATGCGGATGAGGATTTGAAGTTGAGGTACTCATACAAGGATGAGGAGATGTCTTTTATCCCGACCTTTTCGCTGCCTTCGAATGCTTTGTCATTTGCTTTTAAGCGTCGGTTTGGTCCTTCAGACAAGTTGAGCTACTGGTACAATTTTGATTCCGACTACTGGAGTGCGGTATACAAGCACACATATGGCAAGGACTTGAAACTTAAAGCTGGTTATGATTCAGAGGTGCGCCTTGGCTGGGCATCTCTTTGGGTTGGAGATGAAGGTGGCAAAGCAAGGACAGCCCCAATGAAGATGAAGGTTCAATTCATGCTCCAAGTGCCACAAGATGACATTCGATCATCAACTTTGATGTTCCGGGTTAAAAAGAGATGGGACATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009528 GO:0009536 GO:0009706 GO:0009707 GO:0009941 GO:0015075 GO:0015267 GO:0015318 GO:0016020 GO:0016021 GO:0019866 GO:0019867 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0034220 GO:0042170 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

344

Amino Acids

38.27

Weight (kDa)

8.3

Isoelectric Point (pI)

59.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43950 AT2G43950
fragaria_vesca	FvH4_1g00191
malus_domestica	MD00G1087400.v1.1 MD09G1202400.v1.1 MD15G1143200.v1.1
prunus_persica	Prupe.7G269800_v2.0.a1 Prupe.7G269800_v2.0.a1
pyrus_communis	pycom15g12930 pycom290g00210
rosa_chinensis	RchiOBHm_Chr2g0084461 RchiOBHm_Chr7g0203201
rosa_laevigata	RLG00000015620
rosa_multiflora	Rmu_sc0009404.1_g000002
rosa_roxburghii	Rroxscaffold_2G00156040
rosa_rugosa	Rorug01G0454200
rosa_samantha	Rh2AG002300 Rh2BG001900 Rh2CG002200 Rh2DG002400 Rh4BG135000 Rh4CG120800 Rh6BG047200
rosa_wichuraiana	Rw0G021540 Rw1G000710 Rw2G000200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	819
AciI	CCGC	5 cut(s)	5, 296, 369, 650, 815
AcoI	YGGCCR	1 cut(s)	246
AcsI	RAATTY	2 cut(s)	530, 618
AcuI	CTGAAG	2 cut(s)	275, 750
AfaI	GTAC	3 cut(s)	498, 674, 788
AfiI	CCNNNNNNNGG	4 cut(s)	119, 506, 807, 886
AgsI	TTSAA	6 cut(s)	347, 482, 625, 664, 847, 953
AjnI	CCWGG	3 cut(s)	54, 243, 466
AluBI	AGCT	8 cut(s)	150, 232, 259, 289, 457, 521, 780, 857
AluI	AGCT	8 cut(s)	150, 232, 259, 289, 457, 521, 780, 857
Alw21I	GWGCWC	2 cut(s)	291, 638
Alw26I	GTCTC	4 cut(s)	111, 226, 319, 569
Alw44I	GTGCAC	1 cut(s)	634
Ama87I	CYCGRG	1 cut(s)	31
AoxI	GGCC	4 cut(s)	58, 161, 246, 613
ApaLI	GTGCAC	1 cut(s)	634
ApeKI	GCWGC	1 cut(s)	718
ApoI	RAATTY	2 cut(s)	530, 618
ArsI	GACNNNNNNTTYG	2 cut(s)	719, 751
AspLEI	GCGC	1 cut(s)	879
AspS9I	GGNCC	3 cut(s)	58, 386, 761
AsuC2I	CCSGG	3 cut(s)	32, 33, 1007
AsuII	TTCGAA	1 cut(s)	725
AvaI	CYCGRG	1 cut(s)	31
AvaII	GGWCC	2 cut(s)	386, 761
BaeGI	GKGCMC	1 cut(s)	638
BalI	TGGCCA	1 cut(s)	248
BanII	GRGCYC	2 cut(s)	137, 291
BarI	GAAGNNNNNNTAC	2 cut(s)	656, 688
BauI	CACGAG	1 cut(s)	223
Bbv12I	GWGCWC	2 cut(s)	291, 638
BbvCI	CCTCAGC	1 cut(s)	365
BbvI	GCAGC	1 cut(s)	705
BccI	CCATC	1 cut(s)	1014
BciT130I	CCWGG	3 cut(s)	56, 245, 468
BcnI	CCSGG	3 cut(s)	32, 33, 1007
BcoDI	GTCTC	4 cut(s)	111, 226, 319, 569
BisI	GCNGC	2 cut(s)	370, 719
BlsI	GCNGC	2 cut(s)	371, 720
Bme1390I	CCNGG	6 cut(s)	32, 33, 56, 245, 468, 1007
Bme18I	GGWCC	2 cut(s)	386, 761
BmeT110I	CYCGRG	1 cut(s)	31
BmgT120I	GGNCC	3 cut(s)	58, 386, 761
BmiI	GGNNCC	3 cut(s)	9, 134, 373
BmrFI	CCNGG	6 cut(s)	32, 33, 56, 245, 468, 1007
BmsI	GCATC	2 cut(s)	449, 899
BpmI	CTGGAG	1 cut(s)	829
Bpu10I	CCTNAGC	1 cut(s)	365
Bpu14I	TTCGAA	1 cut(s)	725
BpuEI	CTTGAG	1 cut(s)	404
BpuMI	CCSGG	3 cut(s)	32, 33, 1007
BsaI	GGTCTC	1 cut(s)	226
BsaJI	CCNNGG	6 cut(s)	31, 32, 55, 444, 538, 880
BsaXI	ACNNNNNCTCC	2 cut(s)	12, 42
Bsc4I	CCNNNNNNNGG	4 cut(s)	119, 506, 807, 886
Bse1I	ACTGG	2 cut(s)	788, 812
BseBI	CCWGG	3 cut(s)	56, 245, 468
BseDI	CCNNGG	6 cut(s)	31, 32, 55, 444, 538, 880
BseGI	GGATG	3 cut(s)	440, 658, 691
BseLI	CCNNNNNNNGG	4 cut(s)	119, 506, 807, 886
BseMII	CTCAG	1 cut(s)	379
BseNI	ACTGG	2 cut(s)	788, 812
BseRI	GAGGAG	9 cut(s)	78, 81, 84, 87, 90, 145, 353, 587, 704
BseSI	GKGCMC	1 cut(s)	638
BseXI	GCAGC	1 cut(s)	705
BseYI	CCCAGC	2 cut(s)	23, 885
BshFI	GGCC	4 cut(s)	60, 163, 248, 615
BsiHKAI	GWGCWC	2 cut(s)	291, 638
BsiHKCI	CYCGRG	1 cut(s)	31
BsiSI	CCGG	2 cut(s)	32, 1006
BslI	CCNNNNNNNGG	4 cut(s)	119, 506, 807, 886
BsmAI	GTCTC	4 cut(s)	111, 226, 319, 569
BsmBI	CGTCTC	2 cut(s)	111, 569
BsmI	GAATGC	1 cut(s)	733
BsnI	GGCC	4 cut(s)	60, 163, 248, 615
Bso31I	GGTCTC	1 cut(s)	226
BsoBI	CYCGRG	1 cut(s)	31
Bsp119I	TTCGAA	1 cut(s)	725
Bsp1286I	GDGCHC	3 cut(s)	137, 291, 638
Bsp143I	GATC	5 cut(s)	79, 349, 415, 594, 986
BspACI	CCGC	5 cut(s)	5, 296, 369, 650, 815
BspANI	GGCC	4 cut(s)	60, 163, 248, 615
BspCNI	CTCAG	1 cut(s)	378
BspLI	GGNNCC	3 cut(s)	9, 134, 373
BspT104I	TTCGAA	1 cut(s)	725
BspTNI	GGTCTC	1 cut(s)	226
BsrI	ACTGG	2 cut(s)	788, 812
BssECI	CCNNGG	6 cut(s)	31, 32, 55, 444, 538, 880
BssMI	GATC	5 cut(s)	79, 349, 415, 594, 986
BssNAI	GTATAC	1 cut(s)	820
BssSI	CACGAG	1 cut(s)	223
BssT1I	CCWWGG	2 cut(s)	538, 880
Bst1107I	GTATAC	1 cut(s)	820
Bst2BI	CACGAG	1 cut(s)	223
Bst2UI	CCWGG	3 cut(s)	56, 245, 468
Bst6I	CTCTTC	3 cut(s)	493, 564, 575
BstBI	TTCGAA	1 cut(s)	725
BstC8I	GCNNGC	3 cut(s)	230, 287, 459
BstDEI	CTNAG	1 cut(s)	365
BstDSI	CCRYGG	1 cut(s)	444
BstF5I	GGATG	3 cut(s)	440, 658, 691
BstHHI	GCGC	1 cut(s)	879
BstKTI	GATC	5 cut(s)	82, 352, 418, 597, 989
BstMAI	GTCTC	4 cut(s)	111, 226, 319, 569
BstMBI	GATC	5 cut(s)	79, 349, 415, 594, 986
BstMWI	GCNNNNNNNGC	5 cut(s)	295, 458, 647, 929, 967
BstNI	CCWGG	3 cut(s)	56, 245, 468
BstSCI	CCNGG	6 cut(s)	30, 31, 54, 243, 466, 1005
BstSLI	GKGCMC	1 cut(s)	638
BstV1I	GCAGC	1 cut(s)	705
BstZ17I	GTATAC	1 cut(s)	820
BsuRI	GGCC	4 cut(s)	60, 163, 248, 615
BtgI	CCRYGG	1 cut(s)	444
BtsCI	GGATG	3 cut(s)	440, 658, 691
BtsI	GCAGTG	1 cut(s)	636
BtsIMutI	CAGTG	1 cut(s)	636
Cac8I	GCNNGC	3 cut(s)	230, 287, 459
CfoI	GCGC	1 cut(s)	879
Cfr13I	GGNCC	3 cut(s)	58, 386, 761
Cfr9I	CCCGGG	1 cut(s)	31
CseI	GACGC	1 cut(s)	740
Csp6I	GTAC	3 cut(s)	497, 673, 787
CviAII	CATG	2 cut(s)	413, 958
CviQI	GTAC	3 cut(s)	497, 673, 787
DdeI	CTNAG	1 cut(s)	365
DpnI	GATC	5 cut(s)	81, 351, 417, 596, 988
DpnII	GATC	5 cut(s)	79, 349, 415, 594, 986
EaeI	YGGCCR	1 cut(s)	246
Eam1104I	CTCTTC	3 cut(s)	493, 564, 575
EarI	CTCTTC	3 cut(s)	493, 564, 575
EciI	GGCGGA	2 cut(s)	20, 285
Ecl136II	GAGCTC	1 cut(s)	289
Eco130I	CCWWGG	2 cut(s)	538, 880
Eco147I	AGGCCT	1 cut(s)	163
Eco24I	GRGCYC	2 cut(s)	137, 291
Eco31I	GGTCTC	1 cut(s)	226
Eco47I	GGWCC	2 cut(s)	386, 761
Eco53kI	GAGCTC	1 cut(s)	289
Eco57I	CTGAAG	2 cut(s)	275, 750
Eco88I	CYCGRG	1 cut(s)	31
EcoICRI	GAGCTC	1 cut(s)	289
EcoO109I	RGGNCCY	1 cut(s)	58
EcoRII	CCWGG	3 cut(s)	54, 243, 466
EcoT14I	CCWWGG	2 cut(s)	538, 880
EcoT22I	ATGCAT	1 cut(s)	478
EcoT38I	GRGCYC	2 cut(s)	137, 291
ErhI	CCWWGG	2 cut(s)	538, 880
Esp3I	CGTCTC	2 cut(s)	111, 569
FaeI	CATG	2 cut(s)	416, 961
FalI	AAGNNNNNCTT	4 cut(s)	248, 280, 510, 542
FatI	CATG	2 cut(s)	412, 957
FauNDI	CATATG	1 cut(s)	832
FblI	GTMKAC	1 cut(s)	819
Fnu4HI	GCNGC	2 cut(s)	370, 719
FokI	GGATG	3 cut(s)	427, 665, 698
FriOI	GRGCYC	2 cut(s)	137, 291
Fsp4HI	GCNGC	2 cut(s)	370, 719
GlaI	GCGC	1 cut(s)	878
GluI	GCNGC	2 cut(s)	370, 719
GsaI	CCCAGC	2 cut(s)	27, 889
GsuI	CTGGAG	1 cut(s)	829
HaeIII	GGCC	4 cut(s)	60, 163, 248, 615
HapII	CCGG	2 cut(s)	32, 1006
HgaI	GACGC	1 cut(s)	740
HhaI	GCGC	1 cut(s)	879
Hin1II	CATG	2 cut(s)	416, 961
Hin6I	GCGC	1 cut(s)	877
HinP1I	GCGC	1 cut(s)	877
HindIII	AAGCTT	1 cut(s)	455
HinfI	GANTC	5 cut(s)	37, 174, 197, 797, 866
HpaII	CCGG	2 cut(s)	32, 1006
Hpy166II	GTNNAC	2 cut(s)	636, 820
Hpy188I	TCNGA	4 cut(s)	184, 769, 802, 871
Hpy188III	TCNNGA	2 cut(s)	154, 706
Hpy8I	GTNNAC	2 cut(s)	636, 820
Hpy99I	CGWCG	2 cut(s)	380, 756
HpyAV	CCTTC	7 cut(s)	174, 274, 510, 732, 774, 905, 940
HpyCH4V	TGCA	5 cut(s)	71, 228, 397, 476, 636
HpyF10VI	GCNNNNNNNGC	5 cut(s)	295, 458, 647, 929, 967
HpyF3I	CTNAG	1 cut(s)	365
Hsp92II	CATG	2 cut(s)	416, 961
HspAI	GCGC	1 cut(s)	877
Kzo9I	GATC	5 cut(s)	79, 349, 415, 594, 986
LmnI	GCTCC	4 cut(s)	7, 132, 377, 966
Lsp1109I	GCAGC	1 cut(s)	705
LweI	GCATC	2 cut(s)	449, 899
MalI	GATC	5 cut(s)	81, 351, 417, 596, 988
MboI	GATC	5 cut(s)	79, 349, 415, 594, 986
MboII	GAAGA	8 cut(s)	74, 202, 359, 480, 578, 581, 592, 952
MhlI	GDGCHC	3 cut(s)	137, 291, 638
MlsI	TGGCCA	1 cut(s)	248
MluCI	AATT	5 cut(s)	49, 530, 618, 790, 953
MluNI	TGGCCA	1 cut(s)	248
MlyI	GAGTC	2 cut(s)	168, 191
MmeI	TCCRAC	2 cut(s)	825, 883
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	1 cut(s)	478
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	5 cut(s)	333, 528, 747, 852, 1011
MslI	CAYNNNNRTG	1 cut(s)	831
Msp20I	TGGCCA	1 cut(s)	248
MspA1I	CMGCKG	1 cut(s)	369
MspI	CCGG	2 cut(s)	32, 1006
MspR9I	CCNGG	6 cut(s)	32, 33, 56, 245, 468, 1007
Mva1269I	GAATGC	1 cut(s)	733
MvaI	CCWGG	3 cut(s)	56, 245, 468
MwoI	GCNNNNNNNGC	5 cut(s)	295, 458, 647, 929, 967
NciI	CCSGG	3 cut(s)	32, 33, 1007
NdeI	CATATG	1 cut(s)	832
NdeII	GATC	5 cut(s)	79, 349, 415, 594, 986
NlaIII	CATG	2 cut(s)	416, 961
NlaIV	GGNNCC	3 cut(s)	9, 134, 373
NsiI	ATGCAT	1 cut(s)	478
NspV	TTCGAA	1 cut(s)	725
PceI	AGGCCT	1 cut(s)	163
PcsI	WCGNNNNNNNCGW	1 cut(s)	722
PctI	GAATGC	1 cut(s)	733
PfeI	GAWTC	3 cut(s)	37, 797, 866
PkrI	GCNGC	2 cut(s)	371, 720
PleI	GAGTC	2 cut(s)	168, 191
PpsI	GAGTC	2 cut(s)	168, 191
Psp124BI	GAGCTC	1 cut(s)	291
Psp6I	CCWGG	3 cut(s)	54, 243, 466
PspFI	CCCAGC	2 cut(s)	23, 885
PspGI	CCWGG	3 cut(s)	54, 243, 466
PspN4I	GGNNCC	3 cut(s)	9, 134, 373
PspPI	GGNCC	3 cut(s)	58, 386, 761
RsaI	GTAC	3 cut(s)	498, 674, 788
RsaNI	GTAC	3 cut(s)	497, 673, 787
RseI	CAYNNNNRTG	1 cut(s)	831
SacI	GAGCTC	1 cut(s)	291
SaqAI	TTAA	5 cut(s)	333, 528, 747, 852, 1011
SatI	GCNGC	2 cut(s)	370, 719
Sau3AI	GATC	5 cut(s)	79, 349, 415, 594, 986
Sau96I	GGNCC	3 cut(s)	58, 386, 761
SchI	GAGTC	2 cut(s)	168, 191
ScrFI	CCNGG	6 cut(s)	32, 33, 56, 245, 468, 1007
SduI	GDGCHC	3 cut(s)	137, 291, 638
SfaNI	GCATC	2 cut(s)	449, 899
SfuI	TTCGAA	1 cut(s)	725
SinI	GGWCC	2 cut(s)	386, 761
SmaI	CCCGGG	1 cut(s)	33
SmiMI	CAYNNNNRTG	1 cut(s)	831
SmlI	CTYRAG	1 cut(s)	419
SmoI	CTYRAG	1 cut(s)	419
Sse9I	AATT	5 cut(s)	49, 530, 618, 790, 953
SseBI	AGGCCT	1 cut(s)	163
SsiI	CCGC	5 cut(s)	5, 296, 369, 650, 815
SstI	GAGCTC	1 cut(s)	291
StuI	AGGCCT	1 cut(s)	163
StyD4I	CCNGG	6 cut(s)	30, 31, 54, 243, 466, 1005
StyI	CCWWGG	2 cut(s)	538, 880
TaqI	TCGA	8 cut(s)	128, 172, 189, 378, 391, 593, 725, 985
TasI	AATT	5 cut(s)	49, 530, 618, 790, 953
TauI	GCSGC	1 cut(s)	372
TfiI	GAWTC	3 cut(s)	37, 797, 866
Tru1I	TTAA	5 cut(s)	333, 528, 747, 852, 1011
Tru9I	TTAA	5 cut(s)	333, 528, 747, 852, 1011
TscAI	CASTG	1 cut(s)	643
TseI	GCWGC	1 cut(s)	718
TspDTI	ATGAA	4 cut(s)	924, 946, 953, 959
TspGWI	ACGGA	5 cut(s)	93, 193, 364, 392, 433
TspMI	CCCGGG	1 cut(s)	31
TspRI	CASTG	1 cut(s)	643
VneI	GTGCAC	1 cut(s)	634
VpaK11BI	GGWCC	2 cut(s)	386, 761
XapI	RAATTY	2 cut(s)	530, 618
XcmI	CCANNNNNNNNNTGG	1 cut(s)	623
XmaI	CCCGGG	1 cut(s)	31
XmiI	GTMKAC	1 cut(s)	819
Zsp2I	ATGCAT	1 cut(s)	478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.