Rmu_sc0009404.1_g000002

Outer envelope pore protein 37

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009404.1
Physical Location & Seq
Forward (+)
4129 .. 7810
3682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009404.1_g000002.1.cds

Sequence Viewer

Length: 1272 bp
atggcagagtcagcaccaccacccccaaccaccctcccaaaccctaactacccggccgattctccaccaccaccgccgccgccgccagctccgactcccatactgagctgcttgtcctccaaaattaaaaggccttcggttcgagtgacttcggagttcgacagcgactcgtcggtcttcttccacaaggtgtcttgcaagctgttggatagcctggccaagctgaaggtgtcgttcaacaacgaccacaagggcgaggtgtctccgcctcacgtgtcatttatctctcagtacctctccattcactacaacttcgaagatcagtctaccctcctcaacagctccctcgatgttggtcccagattgcaattccgtgcttcccatgatctcaaggcacaacaaggagaggcgactatggttgccaagcttgctgaccctggatatgcagttcaactctcttctcctttcccttctgctggtttgccaaaagctacccttaaattcccccttggtgaagttactttggaggaaaaagaagaggaggagactaacaaaatgttgtctattaatggcattgttaaaggccaacttttgaacgggctctgcactgctcaatatttggatgaggagttgaagttacgatactcattcaaggatgaggagttgtcttttatcccatctatttctctgccttcaaatgcattgtcatttgcttttaagcgtcgcttcggtccttcagacaagttgagttattggtacaattttgattccaactactggagtacggtttacaagcacacatatggcaaggacctaaaactgaaagctggttatgattcagaggtgcgtcttggctgggcatctctttgggttggggatgaaggcggcaaagcaaagacagctccattgaagatgaaagttcaattcatgctccaagtaccgcaagatgacattagatcatcagccttgatgttccgtcaggtgacaggcagaccgaaatgggaagaagcagttaaatcacaaaaggcgtgcttctactttcaatgtattgatcattgcttgttatataacaaaagttccttaaggaaggaagggcccatctgtctgtctccagtctgtagccaaaggttgattaatatcgagaatatggcagttttgtcttttccaggcttccagcaccatttttgtttggcggagtgtagccaaggctctctagctggattatcaccaagtgatgcctccgatgtgagccgtctgttccggtttgaatga

Protein Analysis

423

Amino Acids

47.11

Weight (kDa)

7.54

Isoelectric Point (pI)

58.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 173
AccB7I CCANNNNNTGG 1 cut(s) 777
AccI GTMKAC 1 cut(s) 326
AciI CCGC 8 cut(s) 74, 77, 80, 83, 266, 885, 941, 1193
AcoI YGGCCR 2 cut(s) 54, 216
AcsI RAATTY 1 cut(s) 500
AcuI CTGAAG 2 cut(s) 245, 720
AcvI CACGTG 1 cut(s) 274
AdeI CACNNNGTG 2 cut(s) 190, 1232
AfaI GTAC 4 cut(s) 293, 758, 784, 939
AfiI CCNNNNNNNGG 2 cut(s) 476, 777
AflII CTTAAG 1 cut(s) 1081
AflIII ACRYGT 1 cut(s) 273
AjnI CCWGG 3 cut(s) 213, 436, 1165
AloI GAACNNNNNNTCC 2 cut(s) 432, 464
Alw26I GTCTC 3 cut(s) 267, 539, 1113
AoxI GGCC 5 cut(s) 54, 131, 216, 583, 1094
ApaI GGGCCC 1 cut(s) 1098
ApeKI GCWGC 1 cut(s) 108
ApoI RAATTY 1 cut(s) 500
ArsI GACNNNNNNTTYG 2 cut(s) 689, 721
AseI ATTAAT 2 cut(s) 567, 1134
AspS9I GGNCC 5 cut(s) 356, 731, 811, 1094, 1095
AsuC2I CCSGG 1 cut(s) 53
AsuHPI GGTGA 3 cut(s) 524, 994, 1218
AsuII TTCGAA 1 cut(s) 315
AvaII GGWCC 3 cut(s) 356, 731, 811
BaeGI GKGCMC 1 cut(s) 1098
BalI TGGCCA 1 cut(s) 218
BanII GRGCYC 2 cut(s) 603, 1098
BarI GAAGNNNNNNTAC 2 cut(s) 626, 658
BbrPI CACGTG 1 cut(s) 274
BbsI GAAGAC 1 cut(s) 169
BbvI GCAGC 1 cut(s) 95
BccI CCATC 2 cut(s) 685, 1106
BceAI ACGGC 1 cut(s) 1236
BciT130I CCWGG 3 cut(s) 215, 438, 1167
BclI TGATCA 1 cut(s) 1051
BcnI CCSGG 1 cut(s) 53
BcoDI GTCTC 3 cut(s) 267, 539, 1113
BfaI CTAG 1 cut(s) 1214
BfmI CTRYAG 1 cut(s) 1117
BfrI CTTAAG 1 cut(s) 1081
BisI GCNGC 5 cut(s) 77, 80, 83, 109, 886
BlsI GCNGC 5 cut(s) 78, 81, 84, 110, 887
Bme1390I CCNGG 4 cut(s) 53, 215, 438, 1167
Bme18I GGWCC 3 cut(s) 356, 731, 811
BmgT120I GGNCC 5 cut(s) 356, 731, 811, 1094, 1095
BmiI GGNNCC 2 cut(s) 358, 1096
BmrFI CCNGG 4 cut(s) 53, 215, 438, 1167
BmsI GCATC 2 cut(s) 869, 1225
BpiI GAAGAC 1 cut(s) 169
BpmI CTGGAG 2 cut(s) 799, 1095
Bpu14I TTCGAA 1 cut(s) 315
BpuEI CTTGAG 1 cut(s) 374
BpuMI CCSGG 1 cut(s) 53
BsaAI YACGTR 1 cut(s) 274
BsaBI GATNNNNATC 1 cut(s) 1136
BsaJI CCNNGG 3 cut(s) 436, 508, 1204
BsaWI WCCGGW 1 cut(s) 1260
BsaXI ACNNNNNCTCC 2 cut(s) 620, 650
Bsc4I CCNNNNNNNGG 2 cut(s) 476, 777
Bse1I ACTGG 2 cut(s) 782, 1112
Bse3DI GCAATG 1 cut(s) 1054
Bse8I GATNNNNATC 1 cut(s) 1136
BseBI CCWGG 3 cut(s) 215, 438, 1167
BseDI CCNNGG 3 cut(s) 436, 508, 1204
BseGI GGATG 3 cut(s) 628, 661, 883
BseJI GATNNNNATC 1 cut(s) 1136
BseLI CCNNNNNNNGG 2 cut(s) 476, 777
BseMI GCAATG 1 cut(s) 1054
BseMII CTCAG 2 cut(s) 95, 302
BseNI ACTGG 2 cut(s) 782, 1112
BseRI GAGGAG 5 cut(s) 323, 554, 557, 641, 674
BseSI GKGCMC 1 cut(s) 1098
BseX3I CGGCCG 1 cut(s) 54
BseXI GCAGC 1 cut(s) 95
BseYI CCCAGC 1 cut(s) 855
BsgI GTGCAG 1 cut(s) 589
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 5 cut(s) 56, 133, 218, 585, 1096
BsiEI CGRYCG 1 cut(s) 57
BsiSI CCGG 2 cut(s) 53, 1261
BslFI GGGAC 1 cut(s) 342
BslI CCNNNNNNNGG 2 cut(s) 476, 777
BsmAI GTCTC 3 cut(s) 267, 539, 1113
BsmFI GGGAC 1 cut(s) 342
BsnI GGCC 5 cut(s) 56, 133, 218, 585, 1096
Bsp119I TTCGAA 1 cut(s) 315
Bsp120I GGGCCC 1 cut(s) 1094
Bsp1286I GDGCHC 2 cut(s) 603, 1098
Bsp143I GATC 4 cut(s) 319, 385, 956, 1051
BspACI CCGC 8 cut(s) 74, 77, 80, 83, 266, 885, 941, 1193
BspANI GGCC 5 cut(s) 56, 133, 218, 585, 1096
BspCNI CTCAG 2 cut(s) 96, 301
BspLI GGNNCC 2 cut(s) 358, 1096
BspT104I TTCGAA 1 cut(s) 315
BspTI CTTAAG 1 cut(s) 1081
BsrDI GCAATG 1 cut(s) 1054
BsrI ACTGG 2 cut(s) 782, 1112
BssECI CCNNGG 3 cut(s) 436, 508, 1204
BssMI GATC 4 cut(s) 319, 385, 956, 1051
BssT1I CCWWGG 2 cut(s) 508, 1204
Bst2UI CCWGG 3 cut(s) 215, 438, 1167
Bst4CI ACNGT 1 cut(s) 787
Bst6I CTCTTC 2 cut(s) 463, 531
BstAFI CTTAAG 1 cut(s) 1081
BstBAI YACGTR 1 cut(s) 274
BstBI TTCGAA 1 cut(s) 315
BstC8I GCNNGC 4 cut(s) 87, 200, 429, 1030
BstDEI CTNAG 2 cut(s) 104, 288
BstF5I GGATG 3 cut(s) 628, 661, 883
BstKTI GATC 4 cut(s) 322, 388, 959, 1054
BstMAI GTCTC 3 cut(s) 267, 539, 1113
BstMBI GATC 4 cut(s) 319, 385, 956, 1051
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 4 cut(s) 11, 82, 428, 899
BstNI CCWGG 3 cut(s) 215, 438, 1167
BstSCI CCNGG 4 cut(s) 51, 213, 436, 1165
BstSFI CTRYAG 1 cut(s) 1117
BstSLI GKGCMC 1 cut(s) 1098
BstV1I GCAGC 1 cut(s) 95
BstV2I GAAGAC 1 cut(s) 169
BstZI CGGCCG 1 cut(s) 54
BsuRI GGCC 5 cut(s) 56, 133, 218, 585, 1096
BtsCI GGATG 3 cut(s) 628, 661, 883
BtsI GCAGTG 1 cut(s) 606
BtsIMutI CAGTG 1 cut(s) 606
Cac8I GCNNGC 4 cut(s) 87, 200, 429, 1030
Cfr13I GGNCC 5 cut(s) 356, 731, 811, 1094, 1095
CseI GACGC 2 cut(s) 710, 836
Csp6I GTAC 4 cut(s) 292, 757, 783, 938
CviAII CATG 2 cut(s) 383, 928
CviQI GTAC 4 cut(s) 292, 757, 783, 938
DdeI CTNAG 2 cut(s) 104, 288
DpnI GATC 4 cut(s) 321, 387, 958, 1053
DpnII GATC 4 cut(s) 319, 385, 956, 1051
DraIII CACNNNGTG 2 cut(s) 190, 1232
DrdI GACNNNNNNGTC 1 cut(s) 173
DseDI GACNNNNNNGTC 1 cut(s) 173
EaeI YGGCCR 2 cut(s) 54, 216
EagI CGGCCG 1 cut(s) 54
Eam1104I CTCTTC 2 cut(s) 463, 531
EarI CTCTTC 2 cut(s) 463, 531
EciI GGCGGA 2 cut(s) 255, 1208
EclXI CGGCCG 1 cut(s) 54
Eco130I CCWWGG 2 cut(s) 508, 1204
Eco147I AGGCCT 1 cut(s) 133
Eco24I GRGCYC 2 cut(s) 603, 1098
Eco47I GGWCC 3 cut(s) 356, 731, 811
Eco52I CGGCCG 1 cut(s) 54
Eco57I CTGAAG 2 cut(s) 245, 720
Eco72I CACGTG 1 cut(s) 274
EcoO109I RGGNCCY 2 cut(s) 811, 1094
EcoRII CCWGG 3 cut(s) 213, 436, 1165
EcoT14I CCWWGG 2 cut(s) 508, 1204
EcoT22I ATGCAT 1 cut(s) 703
EcoT38I GRGCYC 2 cut(s) 603, 1098
ErhI CCWWGG 2 cut(s) 508, 1204
FaeI CATG 2 cut(s) 386, 931
FalI AAGNNNNNCTT 8 cut(s) 480, 512, 573, 605, 710, 742, 1016, 1048
FaqI GGGAC 1 cut(s) 342
FatI CATG 2 cut(s) 382, 927
FauNDI CATATG 1 cut(s) 802
FbaI TGATCA 1 cut(s) 1051
FblI GTMKAC 1 cut(s) 326
Fnu4HI GCNGC 5 cut(s) 77, 80, 83, 109, 886
FokI GGATG 3 cut(s) 635, 668, 890
FriOI GRGCYC 2 cut(s) 603, 1098
Fsp4HI GCNGC 5 cut(s) 77, 80, 83, 109, 886
FspBI CTAG 1 cut(s) 1214
GluI GCNGC 5 cut(s) 77, 80, 83, 109, 886
GsaI CCCAGC 1 cut(s) 859
GsuI CTGGAG 2 cut(s) 799, 1095
HaeIII GGCC 5 cut(s) 56, 133, 218, 585, 1096
HapII CCGG 2 cut(s) 53, 1261
HgaI GACGC 2 cut(s) 710, 836
Hin1II CATG 2 cut(s) 386, 931
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 6 cut(s) 8, 59, 94, 167, 767, 836
HpaII CCGG 2 cut(s) 53, 1261
HphI GGTGA 3 cut(s) 524, 994, 1218
Hpy166II GTNNAC 2 cut(s) 327, 790
Hpy188I TCNGA 5 cut(s) 93, 154, 739, 841, 1243
Hpy188III TCNNGA 1 cut(s) 1141
Hpy8I GTNNAC 2 cut(s) 327, 790
Hpy99I CGWCG 2 cut(s) 175, 726
HpyAV CCTTC 8 cut(s) 144, 220, 480, 702, 744, 875, 1081, 1085
HpyCH4III ACNGT 1 cut(s) 787
HpyCH4IV ACGT 1 cut(s) 273
HpyCH4V TGCA 5 cut(s) 198, 367, 446, 606, 701
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 82, 428, 899
HpyF3I CTNAG 2 cut(s) 104, 288
HpySE526I ACGT 1 cut(s) 273
Hsp92II CATG 2 cut(s) 386, 931
Ksp22I TGATCA 1 cut(s) 1051
Kzo9I GATC 4 cut(s) 319, 385, 956, 1051
LmnI GCTCC 4 cut(s) 94, 347, 907, 936
Lsp1109I GCAGC 1 cut(s) 95
LweI GCATC 2 cut(s) 869, 1225
MaeI CTAG 1 cut(s) 1214
MaeII ACGT 1 cut(s) 273
MaeIII GTNAC 4 cut(s) 145, 517, 636, 982
MalI GATC 4 cut(s) 321, 387, 958, 1053
MboI GATC 4 cut(s) 319, 385, 956, 1051
MboII GAAGA 7 cut(s) 169, 172, 329, 450, 548, 922, 1016
MhlI GDGCHC 2 cut(s) 603, 1098
MlsI TGGCCA 1 cut(s) 218
MluCI AATT 5 cut(s) 123, 368, 500, 760, 923
MluNI TGGCCA 1 cut(s) 218
MlyI GAGTC 3 cut(s) 17, 88, 161
MmeI TCCRAC 3 cut(s) 116, 186, 795
Mox20I TGGCCA 1 cut(s) 218
Mph1103I ATGCAT 1 cut(s) 703
MscI TGGCCA 1 cut(s) 218
MseI TTAA 8 cut(s) 126, 498, 567, 579, 717, 1014, 1082, 1134
MslI CAYNNNNRTG 1 cut(s) 801
Msp20I TGGCCA 1 cut(s) 218
MspCI CTTAAG 1 cut(s) 1081
MspI CCGG 2 cut(s) 53, 1261
MspR9I CCNGG 4 cut(s) 53, 215, 438, 1167
MvaI CCWGG 3 cut(s) 215, 438, 1167
MwoI GCNNNNNNNGC 4 cut(s) 11, 82, 428, 899
NciI CCSGG 1 cut(s) 53
NdeI CATATG 1 cut(s) 802
NdeII GATC 4 cut(s) 319, 385, 956, 1051
NlaIII CATG 2 cut(s) 386, 931
NlaIV GGNNCC 2 cut(s) 358, 1096
NmuCI GTSAC 2 cut(s) 145, 982
NsiI ATGCAT 1 cut(s) 703
NspV TTCGAA 1 cut(s) 315
PceI AGGCCT 1 cut(s) 133
PfeI GAWTC 3 cut(s) 59, 767, 836
PflMI CCANNNNNTGG 1 cut(s) 777
PkrI GCNGC 5 cut(s) 78, 81, 84, 110, 887
PleI GAGTC 3 cut(s) 16, 88, 161
PmaCI CACGTG 1 cut(s) 274
PmlI CACGTG 1 cut(s) 274
PpsI GAGTC 3 cut(s) 16, 88, 161
Ppu21I YACGTR 1 cut(s) 274
PpuMI RGGWCCY 1 cut(s) 811
PshBI ATTAAT 2 cut(s) 567, 1134
Psp5II RGGWCCY 1 cut(s) 811
Psp6I CCWGG 3 cut(s) 213, 436, 1165
PspCI CACGTG 1 cut(s) 274
PspFI CCCAGC 1 cut(s) 855
PspGI CCWGG 3 cut(s) 213, 436, 1165
PspN4I GGNNCC 2 cut(s) 358, 1096
PspOMI GGGCCC 1 cut(s) 1094
PspPI GGNCC 5 cut(s) 356, 731, 811, 1094, 1095
PspPPI RGGWCCY 1 cut(s) 811
RsaI GTAC 4 cut(s) 293, 758, 784, 939
RsaNI GTAC 4 cut(s) 292, 757, 783, 938
RseI CAYNNNNRTG 1 cut(s) 801
SaqAI TTAA 8 cut(s) 126, 498, 567, 579, 717, 1014, 1082, 1134
SatI GCNGC 5 cut(s) 77, 80, 83, 109, 886
Sau3AI GATC 4 cut(s) 319, 385, 956, 1051
Sau96I GGNCC 5 cut(s) 356, 731, 811, 1094, 1095
SchI GAGTC 3 cut(s) 17, 88, 161
ScrFI CCNGG 4 cut(s) 53, 215, 438, 1167
SduI GDGCHC 2 cut(s) 603, 1098
SfaNI GCATC 2 cut(s) 869, 1225
SfcI CTRYAG 1 cut(s) 1117
SfuI TTCGAA 1 cut(s) 315
SinI GGWCC 3 cut(s) 356, 731, 811
SmiMI CAYNNNNRTG 1 cut(s) 801
SmlI CTYRAG 2 cut(s) 389, 1081
SmoI CTYRAG 2 cut(s) 389, 1081
Sse9I AATT 5 cut(s) 123, 368, 500, 760, 923
SseBI AGGCCT 1 cut(s) 133
SsiI CCGC 8 cut(s) 74, 77, 80, 83, 266, 885, 941, 1193
SspI AATATT 1 cut(s) 617
SspMI CTAG 1 cut(s) 1214
StuI AGGCCT 1 cut(s) 133
StyD4I CCNGG 4 cut(s) 51, 213, 436, 1165
StyI CCWWGG 2 cut(s) 508, 1204
TaaI ACNGT 1 cut(s) 787
TaiI ACGT 1 cut(s) 276
TaqI TCGA 5 cut(s) 142, 159, 315, 348, 1140
TaqII GACCGA 3 cut(s) 163, 719, 1009
TasI AATT 5 cut(s) 123, 368, 500, 760, 923
TauI GCSGC 4 cut(s) 79, 82, 85, 888
TfiI GAWTC 3 cut(s) 59, 767, 836
Tru1I TTAA 8 cut(s) 126, 498, 567, 579, 717, 1014, 1082, 1134
Tru9I TTAA 8 cut(s) 126, 498, 567, 579, 717, 1014, 1082, 1134
TscAI CASTG 1 cut(s) 613
TseFI GTSAC 2 cut(s) 145, 982
TseI GCWGC 1 cut(s) 108
Tsp45I GTSAC 2 cut(s) 145, 982
TspDTI ATGAA 3 cut(s) 894, 916, 929
TspGWI ACGGA 2 cut(s) 362, 965
TspRI CASTG 1 cut(s) 613
Van91I CCANNNNNTGG 1 cut(s) 777
Vha464I CTTAAG 1 cut(s) 1081
VpaK11BI GGWCC 3 cut(s) 356, 731, 811
VspI ATTAAT 2 cut(s) 567, 1134
XapI RAATTY 1 cut(s) 500
XmiI GTMKAC 1 cut(s) 326
XspI CTAG 1 cut(s) 1214
Zsp2I ATGCAT 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.