Prupe.8G116300_v2.0.a1

La-related protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
14345862 .. 14349529
3668 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G116300.3

Sequence Viewer

Length: 1386 bp
ATGCCCCAATATCTGGGCGCCAAACAAGGCTTCAATATCAAATTACAGTTACTAAACTTGCAGACAATAATCAGAAAAAACCTTAACACTCTAAAAAAATCAGAAACACAGAGAGAGTGGGTAGATAGAGAGAGAGAGAGAGAGAGAATAGAAGAAGAGCAAAAAGGAAAAAAAAAAAAAATGGCACAACCACAACCACCTGGGGAGAAAACCCAAGATGCCCCAGAAATGGAAGTGAAAGAAAACCCAATAAGCCCATCCTTCAAATTCAATGCACAAGCACCTGAATTTGTGCCAAGATCACATACCCAGATGCCCATTTCTGGTTATTTTTATCCCTGCTTTCACTTTCTTGGTGAGTCTGCTTCCCCTGATTGGTTTTACATTGGGGACCAGGAGTTGCCTCCTTATTTGATCTCCAATAATCCCAACATCCCTCTTGCCAATCGATCCAAGAATGCACTCCCAGATGATCTTCAGCAGAAGATCATCAAACAGGTGGAGTACCAGTTCAGCGACATGAGTCTGCTGGCAAATGAATCTTTAGTGAAACACATAAGTAAAGATCCCGAAGGCTATGTTCCAATATCTGTTGTTGCTTCCACCAAAAAAATGAAGTCACTTATTAGTAACAACCACATGCTTGCACAAGCACTCCGGTCCTCTTCAAAGCTTGTTGTAAATGAAGATGGCAAGAAGGTTAGACGTAAGTACCCTTTCACTGAAAAAGACAAAGAGGAATTGCAGTCGCGTACTGTTGTGGCAGAGAATTTGCCTGAAGATCACTCTCATCAAAACCTAGAGAAGATATTTAGTGTGGTTGGAAGTGTGAAAACCATCCGAATATGCCATCCCCATGAATCTAATTCTTCCCGGTCCAAAGGCGATTTCATTATCAGCAACAAGCTTCATGCACTTGTGGAGTATGAGACAACAGATATAGCAGAGAGAGCGGTTGATAAGTTGAGTGATGAAAGGAACTGGAGAAAAGGGCTCCGAGTAAGGTTGCTGCTTAGACGCTCGCCAAAATCTGTTTTGAAGAACCGAAAGTCTGATTTCGATGGCATTTTAGAGGATGAAGAGCCACAATATGACTGTGCAGAAGAAACTTCTCAGCCAAGCAACCCTGAATTGGTTACCGATAGTCCTAATGAAGAAAATTTGGCGGCATCCAAGAAAGGATGGGCTTGGGGGCGTGGTAAGGCCCGAGGGCGTGGCCAGGGACAGAGTGGCCGCGGCCTGATTGCTCCATCTCCACAGTCAAGCAATACCATCCAGTGTGAAGCACCTGCAAAACAGAATGCTAAGGGCCCAAGAATGCCAGATGGGACTAGGGGCTTCACCATGGGAAGAGGCAAGCCCGTAAGCGCCATCAATTCGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

462

Amino Acids

52.11

Weight (kDa)

9.22

Isoelectric Point (pI)

56.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1297
Acc36I ACCTGC 1 cut(s) 1297
AccB1I GGYRCC 1 cut(s) 17
AccB7I CCANNNNNTGG 1 cut(s) 13
AccBSI CCGCTC 1 cut(s) 953
AccII CGCG 2 cut(s) 751, 1236
AciI CCGC 4 cut(s) 953, 1166, 1234, 1236
AclWI GGATC 2 cut(s) 444, 560
AcoI YGGCCR 2 cut(s) 1216, 1231
AcsI RAATTY 4 cut(s) 266, 287, 769, 1159
AcuI CTGAAG 2 cut(s) 461, 798
AcyI GRCGYC 1 cut(s) 18
AfaI GTAC 3 cut(s) 506, 713, 754
AfiI CCNNNNNNNGG 5 cut(s) 13, 229, 323, 375, 1132
AgsI TTSAA 5 cut(s) 34, 265, 271, 669, 1039
AjnI CCWGG 3 cut(s) 199, 393, 1218
AjuI GAANNNNNNNTTGG 4 cut(s) 14, 46, 872, 904
AloI GAACNNNNNNTCC 2 cut(s) 494, 526
AluBI AGCT 2 cut(s) 673, 907
AluI AGCT 2 cut(s) 673, 907
Alw26I GTCTC 1 cut(s) 923
AlwI GGATC 2 cut(s) 444, 560
Ama87I CYCGRG 1 cut(s) 1206
AoxI GGCC 5 cut(s) 1203, 1216, 1231, 1237, 1309
ApaI GGGCCC 1 cut(s) 1313
ApeKI GCWGC 1 cut(s) 1009
ApoI RAATTY 4 cut(s) 266, 287, 769, 1159
AspLEI GCGC 2 cut(s) 20, 1370
AspS9I GGNCC 6 cut(s) 391, 660, 876, 1204, 1309, 1310
AsuC2I CCSGG 1 cut(s) 874
AsuHPI GGTGA 2 cut(s) 368, 1333
AvaI CYCGRG 1 cut(s) 1206
AvaII GGWCC 3 cut(s) 391, 660, 876
BaeGI GKGCMC 1 cut(s) 1313
BaeI ACNNNNGTAYC 2 cut(s) 695, 728
BalI TGGCCA 1 cut(s) 1218
BanI GGYRCC 1 cut(s) 17
BanII GRGCYC 2 cut(s) 996, 1313
BbvI GCAGC 1 cut(s) 996
BciT130I CCWGG 3 cut(s) 201, 395, 1220
BcnI CCSGG 1 cut(s) 874
BcoDI GTCTC 1 cut(s) 923
BfaI CTAG 2 cut(s) 800, 1332
BfoI RGCGCY 2 cut(s) 21, 1371
BfuAI ACCTGC 1 cut(s) 1297
BisI GCNGC 4 cut(s) 1010, 1167, 1234, 1237
BlsI GCNGC 4 cut(s) 1011, 1168, 1235, 1238
Bme1390I CCNGG 4 cut(s) 201, 395, 874, 1220
Bme18I GGWCC 3 cut(s) 391, 660, 876
BmeT110I CYCGRG 1 cut(s) 1206
BmgT120I GGNCC 6 cut(s) 391, 660, 876, 1204, 1309, 1310
BmiI GGNNCC 4 cut(s) 19, 392, 995, 1311
BmrFI CCNGG 4 cut(s) 201, 395, 874, 1220
BmsI GCATC 3 cut(s) 208, 303, 1178
BoxI GACNNNNGTC 1 cut(s) 522
BpmI CTGGAG 1 cut(s) 1003
Bpu10I CCTNAGC 1 cut(s) 1305
BpuMI CCSGG 1 cut(s) 874
Bsa29I ATCGAT 1 cut(s) 448
BsaHI GRCGYC 1 cut(s) 18
BsaJI CCNNGG 5 cut(s) 200, 1207, 1219, 1234, 1344
BsaWI WCCGGW 1 cut(s) 657
BsaXI ACNNNNNCTCC 4 cut(s) 494, 524, 639, 669
Bsc4I CCNNNNNNNGG 5 cut(s) 13, 229, 323, 375, 1132
Bse1I ACTGG 3 cut(s) 508, 986, 1276
BseBI CCWGG 3 cut(s) 201, 395, 1220
BseCI ATCGAT 1 cut(s) 448
BseDI CCNNGG 5 cut(s) 200, 1207, 1219, 1234, 1344
BseGI GGATG 8 cut(s) 257, 432, 837, 850, 1081, 1169, 1187, 1272
BseLI CCNNNNNNNGG 5 cut(s) 13, 229, 323, 375, 1132
BseMII CTCAG 1 cut(s) 1127
BseNI ACTGG 3 cut(s) 508, 986, 1276
BseSI GKGCMC 1 cut(s) 1313
BseXI GCAGC 1 cut(s) 996
BsgI GTGCAG 1 cut(s) 1119
Bsh1236I CGCG 2 cut(s) 751, 1236
BshFI GGCC 5 cut(s) 1205, 1218, 1233, 1239, 1311
BshNI GGYRCC 1 cut(s) 17
BshVI ATCGAT 1 cut(s) 448
BsiHKCI CYCGRG 1 cut(s) 1206
BsiSI CCGG 2 cut(s) 658, 874
BslFI GGGAC 3 cut(s) 404, 1236, 1342
BslI CCNNNNNNNGG 5 cut(s) 13, 229, 323, 375, 1132
BsmAI GTCTC 1 cut(s) 923
BsmFI GGGAC 3 cut(s) 404, 1236, 1342
BsmI GAATGC 3 cut(s) 463, 1306, 1323
BsnI GGCC 5 cut(s) 1205, 1218, 1233, 1239, 1311
BsoBI CYCGRG 1 cut(s) 1206
Bsp120I GGGCCC 1 cut(s) 1309
Bsp1286I GDGCHC 2 cut(s) 996, 1313
Bsp143I GATC 7 cut(s) 299, 414, 449, 472, 486, 565, 781
Bsp19I CCATGG 1 cut(s) 1344
BspACI CCGC 4 cut(s) 953, 1166, 1234, 1236
BspANI GGCC 5 cut(s) 1205, 1218, 1233, 1239, 1311
BspCNI CTCAG 1 cut(s) 1126
BspDI ATCGAT 1 cut(s) 448
BspFNI CGCG 2 cut(s) 751, 1236
BspLI GGNNCC 4 cut(s) 19, 392, 995, 1311
BspMI ACCTGC 1 cut(s) 1297
BspPI GGATC 2 cut(s) 444, 560
BspQI GCTCTTC 2 cut(s) 150, 1074
BspT107I GGYRCC 1 cut(s) 17
BsrBI CCGCTC 1 cut(s) 953
BsrI ACTGG 3 cut(s) 508, 986, 1276
BssECI CCNNGG 5 cut(s) 200, 1207, 1219, 1234, 1344
BssMI GATC 7 cut(s) 299, 414, 449, 472, 486, 565, 781
BssNI GRCGYC 1 cut(s) 18
BssT1I CCWWGG 1 cut(s) 1344
Bst2UI CCWGG 3 cut(s) 201, 395, 1220
Bst4CI ACNGT 4 cut(s) 48, 757, 1097, 1260
Bst6I CTCTTC 4 cut(s) 150, 670, 1074, 1345
BstACI GRCGYC 1 cut(s) 18
BstC8I GCNNGC 4 cut(s) 531, 645, 1022, 1358
BstDEI CTNAG 3 cut(s) 1013, 1113, 1305
BstDSI CCRYGG 2 cut(s) 1234, 1344
BstEII GGTNACC 1 cut(s) 1135
BstF5I GGATG 8 cut(s) 257, 432, 837, 850, 1081, 1169, 1187, 1272
BstFNI CGCG 2 cut(s) 751, 1236
BstH2I RGCGCY 2 cut(s) 21, 1371
BstHHI GCGC 2 cut(s) 20, 1370
BstKTI GATC 7 cut(s) 302, 417, 452, 475, 489, 568, 784
BstMAI GTCTC 1 cut(s) 923
BstMBI GATC 7 cut(s) 299, 414, 449, 472, 486, 565, 781
BstMWI GCNNNNNNNGC 1 cut(s) 950
BstNI CCWGG 3 cut(s) 201, 395, 1220
BstNSI RCATGY 1 cut(s) 643
BstPAI GACNNNNGTC 1 cut(s) 522
BstPI GGTNACC 1 cut(s) 1135
BstSCI CCNGG 4 cut(s) 199, 393, 872, 1218
BstSLI GKGCMC 1 cut(s) 1313
BstUI CGCG 2 cut(s) 751, 1236
BstV1I GCAGC 1 cut(s) 996
BstX2I RGATCY 1 cut(s) 565
BstYI RGATCY 1 cut(s) 565
Bsu15I ATCGAT 1 cut(s) 448
BsuRI GGCC 5 cut(s) 1205, 1218, 1233, 1239, 1311
BsuTUI ATCGAT 1 cut(s) 448
BtgI CCRYGG 2 cut(s) 1234, 1344
BtsCI GGATG 8 cut(s) 257, 432, 837, 850, 1081, 1169, 1187, 1272
BtsIMutI CAGTG 2 cut(s) 720, 1283
BveI ACCTGC 1 cut(s) 1297
Cac8I GCNNGC 4 cut(s) 531, 645, 1022, 1358
CfoI GCGC 2 cut(s) 20, 1370
Cfr13I GGNCC 6 cut(s) 391, 660, 876, 1204, 1309, 1310
Cfr42I CCGCGG 1 cut(s) 1237
ClaI ATCGAT 1 cut(s) 448
CseI GACGC 1 cut(s) 1026
Csp6I GTAC 3 cut(s) 505, 712, 753
CviAII CATG 5 cut(s) 520, 640, 857, 911, 1345
CviQI GTAC 3 cut(s) 505, 712, 753
DdeI CTNAG 3 cut(s) 1013, 1113, 1305
DinI GGCGCC 1 cut(s) 19
DpnI GATC 7 cut(s) 301, 416, 451, 474, 488, 567, 783
DpnII GATC 7 cut(s) 299, 414, 449, 472, 486, 565, 781
EaeI YGGCCR 2 cut(s) 1216, 1231
Eam1104I CTCTTC 4 cut(s) 150, 670, 1074, 1345
EarI CTCTTC 4 cut(s) 150, 670, 1074, 1345
Eco130I CCWWGG 1 cut(s) 1344
Eco24I GRGCYC 2 cut(s) 996, 1313
Eco47I GGWCC 3 cut(s) 391, 660, 876
Eco57I CTGAAG 2 cut(s) 461, 798
Eco88I CYCGRG 1 cut(s) 1206
Eco91I GGTNACC 1 cut(s) 1135
EcoO109I RGGNCCY 1 cut(s) 1309
EcoO65I GGTNACC 1 cut(s) 1135
EcoRII CCWGG 3 cut(s) 199, 393, 1218
EcoT14I CCWWGG 1 cut(s) 1344
EcoT38I GRGCYC 2 cut(s) 996, 1313
EgeI GGCGCC 1 cut(s) 19
EheI GGCGCC 1 cut(s) 19
ErhI CCWWGG 1 cut(s) 1344
FaeI CATG 5 cut(s) 523, 643, 860, 914, 1348
FaqI GGGAC 3 cut(s) 404, 1236, 1342
FatI CATG 5 cut(s) 519, 639, 856, 910, 1344
Fnu4HI GCNGC 4 cut(s) 1010, 1167, 1234, 1237
FokI GGATG 8 cut(s) 244, 419, 824, 837, 1088, 1156, 1194, 1259
FriOI GRGCYC 2 cut(s) 996, 1313
Fsp4HI GCNGC 4 cut(s) 1010, 1167, 1234, 1237
FspBI CTAG 2 cut(s) 800, 1332
GlaI GCGC 2 cut(s) 19, 1369
GluI GCNGC 4 cut(s) 1010, 1167, 1234, 1237
GsuI CTGGAG 1 cut(s) 1003
HaeII RGCGCY 2 cut(s) 21, 1371
HaeIII GGCC 5 cut(s) 1205, 1218, 1233, 1239, 1311
HapII CCGG 2 cut(s) 658, 874
HgaI GACGC 1 cut(s) 1026
HhaI GCGC 2 cut(s) 20, 1370
Hin1I GRCGYC 1 cut(s) 18
Hin1II CATG 5 cut(s) 523, 643, 860, 914, 1348
Hin6I GCGC 2 cut(s) 18, 1368
HinP1I GCGC 2 cut(s) 18, 1368
HindIII AAGCTT 2 cut(s) 671, 905
HinfI GANTC 4 cut(s) 359, 523, 539, 860
HpaII CCGG 2 cut(s) 658, 874
HphI GGTGA 2 cut(s) 368, 1333
Hpy188I TCNGA 5 cut(s) 74, 103, 842, 998, 1054
Hpy188III TCNNGA 1 cut(s) 569
HpyAV CCTTC 3 cut(s) 271, 566, 691
HpyCH4III ACNGT 4 cut(s) 48, 757, 1097, 1260
HpyCH4IV ACGT 1 cut(s) 706
HpyCH4V TGCA 8 cut(s) 61, 275, 461, 647, 745, 914, 1100, 1292
HpyF10VI GCNNNNNNNGC 1 cut(s) 950
HpyF3I CTNAG 3 cut(s) 1013, 1113, 1305
HpySE526I ACGT 1 cut(s) 706
Hsp92I GRCGYC 1 cut(s) 18
Hsp92II CATG 5 cut(s) 523, 643, 860, 914, 1348
HspAI GCGC 2 cut(s) 18, 1368
KasI GGCGCC 1 cut(s) 17
KspI CCGCGG 1 cut(s) 1237
Kzo9I GATC 7 cut(s) 299, 414, 449, 472, 486, 565, 781
LguI GCTCTTC 2 cut(s) 150, 1074
LmnI GCTCC 2 cut(s) 999, 1252
Lsp1109I GCAGC 1 cut(s) 996
LweI GCATC 3 cut(s) 208, 303, 1178
MaeI CTAG 2 cut(s) 800, 1332
MaeII ACGT 1 cut(s) 706
MaeIII GTNAC 4 cut(s) 48, 618, 629, 1135
MalI GATC 7 cut(s) 301, 416, 451, 474, 488, 567, 783
MbiI CCGCTC 1 cut(s) 953
MboI GATC 7 cut(s) 299, 414, 449, 472, 486, 565, 781
MflI RGATCY 1 cut(s) 565
MhlI GDGCHC 2 cut(s) 996, 1313
MlsI TGGCCA 1 cut(s) 1218
MluCI AATT 9 cut(s) 41, 266, 287, 740, 769, 865, 1130, 1159, 1375
MluNI TGGCCA 1 cut(s) 1218
Mly113I GGCGCC 1 cut(s) 18
MlyI GAGTC 2 cut(s) 368, 532
MmeI TCCRAC 1 cut(s) 802
MnlI CCTC 7 cut(s) 414, 447, 673, 730, 1066, 1202, 1346
Mox20I TGGCCA 1 cut(s) 1218
MscI TGGCCA 1 cut(s) 1218
MseI TTAA 1 cut(s) 84
MslI CAYNNNNRTG 1 cut(s) 855
Msp20I TGGCCA 1 cut(s) 1218
MspA1I CMGCKG 1 cut(s) 1236
MspI CCGG 2 cut(s) 658, 874
MspR9I CCNGG 4 cut(s) 201, 395, 874, 1220
Mva1269I GAATGC 3 cut(s) 463, 1306, 1323
MvaI CCWGG 3 cut(s) 201, 395, 1220
MvnI CGCG 2 cut(s) 751, 1236
MwoI GCNNNNNNNGC 1 cut(s) 950
NarI GGCGCC 1 cut(s) 18
NciI CCSGG 1 cut(s) 874
NcoI CCATGG 1 cut(s) 1344
NdeII GATC 7 cut(s) 299, 414, 449, 472, 486, 565, 781
NlaIII CATG 5 cut(s) 523, 643, 860, 914, 1348
NlaIV GGNNCC 4 cut(s) 19, 392, 995, 1311
NmuCI GTSAC 1 cut(s) 618
NspI RCATGY 1 cut(s) 643
PaqCI CACCTGC 1 cut(s) 1297
PciSI GCTCTTC 2 cut(s) 150, 1074
PctI GAATGC 3 cut(s) 463, 1306, 1323
PfeI GAWTC 2 cut(s) 539, 860
PflMI CCANNNNNTGG 1 cut(s) 13
PkrI GCNGC 4 cut(s) 1011, 1168, 1235, 1238
PleI GAGTC 2 cut(s) 367, 531
PluTI GGCGCC 1 cut(s) 21
PpsI GAGTC 2 cut(s) 367, 531
PshAI GACNNNNGTC 1 cut(s) 522
Psp6I CCWGG 3 cut(s) 199, 393, 1218
PspEI GGTNACC 1 cut(s) 1135
PspGI CCWGG 3 cut(s) 199, 393, 1218
PspN4I GGNNCC 4 cut(s) 19, 392, 995, 1311
PspOMI GGGCCC 1 cut(s) 1309
PspPI GGNCC 6 cut(s) 391, 660, 876, 1204, 1309, 1310
PsuI RGATCY 1 cut(s) 565
RsaI GTAC 3 cut(s) 506, 713, 754
RsaNI GTAC 3 cut(s) 505, 712, 753
RseI CAYNNNNRTG 1 cut(s) 855
SacII CCGCGG 1 cut(s) 1237
SapI GCTCTTC 2 cut(s) 150, 1074
SaqAI TTAA 1 cut(s) 84
SatI GCNGC 4 cut(s) 1010, 1167, 1234, 1237
Sau3AI GATC 7 cut(s) 299, 414, 449, 472, 486, 565, 781
Sau96I GGNCC 6 cut(s) 391, 660, 876, 1204, 1309, 1310
SchI GAGTC 2 cut(s) 368, 532
ScrFI CCNGG 4 cut(s) 201, 395, 874, 1220
SduI GDGCHC 2 cut(s) 996, 1313
SfaNI GCATC 3 cut(s) 208, 303, 1178
SfoI GGCGCC 1 cut(s) 19
Sfr303I CCGCGG 1 cut(s) 1237
SgrBI CCGCGG 1 cut(s) 1237
SinI GGWCC 3 cut(s) 391, 660, 876
SmiMI CAYNNNNRTG 1 cut(s) 855
Sse9I AATT 9 cut(s) 41, 266, 287, 740, 769, 865, 1130, 1159, 1375
SsiI CCGC 4 cut(s) 953, 1166, 1234, 1236
SspDI GGCGCC 1 cut(s) 17
SspMI CTAG 2 cut(s) 800, 1332
StyD4I CCNGG 4 cut(s) 199, 393, 872, 1218
StyI CCWWGG 1 cut(s) 1344
TaaI ACNGT 4 cut(s) 48, 757, 1097, 1260
TaiI ACGT 1 cut(s) 709
TaqI TCGA 2 cut(s) 448, 1059
TasI AATT 9 cut(s) 41, 266, 287, 740, 769, 865, 1130, 1159, 1375
TauI GCSGC 3 cut(s) 1169, 1236, 1239
TfiI GAWTC 2 cut(s) 539, 860
Tru1I TTAA 1 cut(s) 84
Tru9I TTAA 1 cut(s) 84
TscAI CASTG 2 cut(s) 727, 1283
TseFI GTSAC 1 cut(s) 618
TseI GCWGC 1 cut(s) 1009
Tsp45I GTSAC 1 cut(s) 618
TspDTI ATGAA 9 cut(s) 552, 629, 699, 873, 880, 899, 987, 1092, 1167
TspRI CASTG 2 cut(s) 727, 1283
Van91I CCANNNNNTGG 1 cut(s) 13
VpaK11BI GGWCC 3 cut(s) 391, 660, 876
XapI RAATTY 4 cut(s) 266, 287, 769, 1159
XceI RCATGY 1 cut(s) 643
XcmI CCANNNNNNNNNTGG 1 cut(s) 1226
XspI CTAG 2 cut(s) 800, 1332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.