La-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19090 AT3G19090 |
| fragaria_vesca | FvH4_2g06870 FvH4_2g06870 |
| malus_domestica | MD05G1074900.v1.1 MD10G1089400.v1.1 |
| prunus_persica | Prupe.8G116300_v2.0.a1 Prupe.8G116300_v2.0.a1 Prupe.8G116300_v2.0.a1 |
| pyrus_communis | pycom05g06810 pycom10g07290 |
| rosa_chinensis | RchiOBHm_Chr6g0259181 |
| rosa_laevigata | RLG00000014551 |
| rosa_multiflora | Rmu_co8316895.1_g000001 Rmu_sc0002723.1_g000050 |
| rosa_roxburghii | Rroxscaffold_7G00206310 Rroxscaffold_7G00206480 |
| rosa_rugosa | Rorug05G0585400 Rorug05G0585400 |
| rosa_samantha | Rh1AG078000 Rh1DG082900 Rh2AG437600 Rh2BG446100 Rh2DG456300 Rh6AG102400 Rh6BG094700 Rh6CG091800 Rh6DG085800 |
| rosa_wichuraiana | Rw6G008850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 97 |
| AclWI | GGATC | 1 cut(s) | 258 |
| AcsI | RAATTY | 2 cut(s) | 83, 104 |
| AcuI | CTGAAG | 1 cut(s) | 275 |
| AfaI | GTAC | 1 cut(s) | 276 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 140, 192 |
| AgsI | TTSAA | 2 cut(s) | 82, 88 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 59, 91 |
| AluBI | AGCT | 1 cut(s) | 289 |
| AluI | AGCT | 1 cut(s) | 289 |
| AlwI | GGATC | 1 cut(s) | 258 |
| ApoI | RAATTY | 2 cut(s) | 83, 104 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 1 cut(s) | 208 |
| AsuC2I | CCSGG | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 1 cut(s) | 185 |
| AvaII | GGWCC | 1 cut(s) | 208 |
| BanI | GGYRCC | 1 cut(s) | 97 |
| BcnI | CCSGG | 1 cut(s) | 188 |
| Bme1390I | CCNGG | 1 cut(s) | 188 |
| Bme18I | GGWCC | 1 cut(s) | 208 |
| BmgT120I | GGNCC | 1 cut(s) | 208 |
| BmiI | GGNNCC | 2 cut(s) | 99, 209 |
| BmrFI | CCNGG | 1 cut(s) | 188 |
| BmsI | GCATC | 1 cut(s) | 120 |
| Bpu10I | CCTNAGC | 1 cut(s) | 93 |
| BpuMI | CCSGG | 1 cut(s) | 188 |
| Bsa29I | ATCGAT | 1 cut(s) | 262 |
| BsaJI | CCNNGG | 1 cut(s) | 186 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 140, 192 |
| BseCI | ATCGAT | 1 cut(s) | 262 |
| BseDI | CCNNGG | 1 cut(s) | 186 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 140, 192 |
| BseMII | CTCAG | 1 cut(s) | 107 |
| BshNI | GGYRCC | 1 cut(s) | 97 |
| BshVI | ATCGAT | 1 cut(s) | 262 |
| BsiSI | CCGG | 1 cut(s) | 188 |
| BslFI | GGGAC | 1 cut(s) | 221 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 140, 192 |
| BsmFI | GGGAC | 1 cut(s) | 221 |
| Bsp143I | GATC | 3 cut(s) | 116, 231, 263 |
| BspCNI | CTCAG | 1 cut(s) | 106 |
| BspDI | ATCGAT | 1 cut(s) | 262 |
| BspLI | GGNNCC | 2 cut(s) | 99, 209 |
| BspPI | GGATC | 1 cut(s) | 258 |
| BspT107I | GGYRCC | 1 cut(s) | 97 |
| BssECI | CCNNGG | 1 cut(s) | 186 |
| BssMI | GATC | 3 cut(s) | 116, 231, 263 |
| BstDEI | CTNAG | 1 cut(s) | 93 |
| BstKTI | GATC | 3 cut(s) | 119, 234, 266 |
| BstMBI | GATC | 3 cut(s) | 116, 231, 263 |
| BstSCI | CCNGG | 1 cut(s) | 186 |
| Bsu15I | ATCGAT | 1 cut(s) | 262 |
| BsuTUI | ATCGAT | 1 cut(s) | 262 |
| BtsI | GCAGTG | 1 cut(s) | 177 |
| BtsIMutI | CAGTG | 1 cut(s) | 177 |
| Cfr13I | GGNCC | 1 cut(s) | 208 |
| ClaI | ATCGAT | 1 cut(s) | 262 |
| Csp6I | GTAC | 1 cut(s) | 275 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 35 |
| CviAII | CATG | 1 cut(s) | 46 |
| CviJI | RGCY | 1 cut(s) | 289 |
| CviKI_1 | RGCY | 1 cut(s) | 289 |
| CviQI | GTAC | 1 cut(s) | 275 |
| DdeI | CTNAG | 1 cut(s) | 93 |
| DpnI | GATC | 3 cut(s) | 118, 233, 265 |
| DpnII | GATC | 3 cut(s) | 116, 231, 263 |
| Eco47I | GGWCC | 1 cut(s) | 208 |
| Eco57I | CTGAAG | 1 cut(s) | 275 |
| FaeI | CATG | 1 cut(s) | 49 |
| FaiI | YATR | 3 cut(s) | 47, 123, 254 |
| FaqI | GGGAC | 1 cut(s) | 221 |
| FatI | CATG | 1 cut(s) | 45 |
| HapII | CCGG | 1 cut(s) | 188 |
| Hin1II | CATG | 1 cut(s) | 49 |
| HinfI | GANTC | 1 cut(s) | 35 |
| HpaII | CCGG | 1 cut(s) | 188 |
| HphI | GGTGA | 1 cut(s) | 185 |
| Hpy188I | TCNGA | 1 cut(s) | 43 |
| HpyAV | CCTTC | 1 cut(s) | 88 |
| HpyF3I | CTNAG | 1 cut(s) | 93 |
| Hsp92II | CATG | 1 cut(s) | 49 |
| Kzo9I | GATC | 3 cut(s) | 116, 231, 263 |
| LpnPI | CCDG | 8 cut(s) | 30, 48, 80, 114, 127, 140, 169, 201 |
| LweI | GCATC | 1 cut(s) | 120 |
| MaeIII | GTNAC | 1 cut(s) | 173 |
| MalI | GATC | 3 cut(s) | 118, 233, 265 |
| MboI | GATC | 3 cut(s) | 116, 231, 263 |
| MluCI | AATT | 3 cut(s) | 83, 104, 215 |
| MnlI | CCTC | 2 cut(s) | 49, 231 |
| MroXI | GAANNNNTTC | 1 cut(s) | 108 |
| MslI | CAYNNNNRTG | 1 cut(s) | 50 |
| MspI | CCGG | 1 cut(s) | 188 |
| MspR9I | CCNGG | 1 cut(s) | 188 |
| NciI | CCSGG | 1 cut(s) | 188 |
| NdeII | GATC | 3 cut(s) | 116, 231, 263 |
| NlaIII | CATG | 1 cut(s) | 49 |
| NlaIV | GGNNCC | 2 cut(s) | 99, 209 |
| NmuCI | GTSAC | 1 cut(s) | 173 |
| PdmI | GAANNNNTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 1 cut(s) | 35 |
| PspN4I | GGNNCC | 2 cut(s) | 99, 209 |
| PspPI | GGNCC | 1 cut(s) | 208 |
| RsaI | GTAC | 1 cut(s) | 276 |
| RsaNI | GTAC | 1 cut(s) | 275 |
| RseI | CAYNNNNRTG | 1 cut(s) | 50 |
| Sau3AI | GATC | 3 cut(s) | 116, 231, 263 |
| Sau96I | GGNCC | 1 cut(s) | 208 |
| ScrFI | CCNGG | 1 cut(s) | 188 |
| SetI | ASST | 4 cut(s) | 19, 103, 223, 291 |
| SfaNI | GCATC | 1 cut(s) | 120 |
| SinI | GGWCC | 1 cut(s) | 208 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 50 |
| Sse9I | AATT | 3 cut(s) | 83, 104, 215 |
| SspI | AATATT | 1 cut(s) | 247 |
| StyD4I | CCNGG | 1 cut(s) | 186 |
| TaqI | TCGA | 1 cut(s) | 262 |
| TasI | AATT | 3 cut(s) | 83, 104, 215 |
| TatI | WGTACW | 1 cut(s) | 274 |
| TfiI | GAWTC | 1 cut(s) | 35 |
| TscAI | CASTG | 1 cut(s) | 184 |
| TseFI | GTSAC | 1 cut(s) | 173 |
| Tsp45I | GTSAC | 1 cut(s) | 173 |
| TspRI | CASTG | 1 cut(s) | 184 |
| VpaK11BI | GGWCC | 1 cut(s) | 208 |
| XapI | RAATTY | 2 cut(s) | 83, 104 |
| XmnI | GAANNNNTTC | 1 cut(s) | 108 |