Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004157

Physical Location & Seq

Genomic Coordinates Reverse (-)

16805122 .. 16813179

Gene Structure 8058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G158300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3183 bp

ATGAGCTTCTCTGCCAAGCCTCAAACCTTAACACTAATCTCATGCACTCCTCTATCTTCTTCTTCTTCTTCTTCCTTCTCCTCCTCTCTCCCATCAATTCGCAGACACTTCCTCGGCTGCGGTGGCCATAGTCTCCGACCGCTCTCCGGCGATCTTCGCTCTCTTAGAAAACGCCGAAGCCTGGCCGGGGACCATCGCTCCCCTCCCTCGAAGTTTCTCATCAAGGCCTCTCTGGACCCGCATTCGCTTCTCGTCGTCGTCGCCATCGTTACCTTCTCTGCTGTCTCCGTCGTCTACTTCAATCGGCCATTCAAGTCCAAGAAGAATCTCGATGCTAGAGTTAGAGAGCTCAGAGAGGTTAGAGACGCCAAAGAGGTCAGTAGCCAGCTACCAATCCGCGAAAATCAGATTCTTGGTTTTGATGCTTTGAACGGAAAGATTGAAGAAATAGAGGCACCGGTGCTGCAATTTCACAATTCTGCGCAGGAGTCTCTTGCGCCTTTAGTGTTTGAATCAACCGCAGTGCTTCAACCGCTTCGTTTTCCCACTGAGTTGACTCAGTTGCAGCAGCCAGAGCGGTCTGAAGATGTTGATTATGATCCAATTTCGGAAGAGTTCTCTAAATTAATGGGTGAACGGTCTGAAGATGGTGGTCGTGACCCAATTTCTGACGAGTTCTCTAAATTAATGAGTGATTCTAATTTTGGCGTAGCTTCACCTTCTGTTCCTGTAGATGATGAGGAAAGCGTTGAAGTTGGCGAAAGCGATGAAGTCGGCGAAGCTACTAGCTTTCATGTACTCAATAGAGAATCGGTGAGAGAAGAGCTTCACATGTTTTATGAGTCGAACAAGTCTGAGACGAAATCTGTAGCAAGCTTGAATGGTAAAAAGCCATCTTCTTTTTTGAGGAACATCACTGTGACAGGGGCGGATTTAATACCACAAGCTTCCCATCACACTACAGAGTCTATAGAAGGCCATACCCGCAGCAGAAAGGACTTGGGAAAAGGCAGTGGATATTCAAGCGACAAAGAAGTAAGACATTTGCCTAAAAAGAATTCTGGGACTATGACCCAGTTTCCCCACCCTCATGGGATTCATACAAATGACAGAGATCTTCTATCAGAGCAATTAAGTGCTTACCATCGTTTGCTAAAGGATGGGAGGCTAGGCGACTCTTTAAAATTGCTTGAAGATTTGGAAAGAAGGGGTTTGTTGGATATGAATAAGGTTTATCATGCAAGGTTTTTTGAAATCTGCAAATCGCAAAAGGCTGTTGACAAAGCTTTCCGTTTCATCAAACTGATTCCAAATCCAACCTTGAGTACATATAATATGCTTATGACTGTCTGTGCAAGTTCTCAAGATTCAGAGGAAGCTTTCCATGTTCTGCGACTTGTCCGGGAGGCTGGAATGAAGCCTGATTGCAAACTTTATACTACTCTGATATCAACATGCGGTAAAAGTGGAAAAGTTTACACGATGTTTGATGTTTTTCATGAGATGGTTAATGCTGGAGTAGAACCAAATGTTCACACATATGGGGCACTTATTGATGGTTGTGGCAGAGCTGGGGAAGTGGCCAAGGCTTTTGGTGCTTATGGGATAATGAGGTCTAAGAAAGTGAAGCCAGATCGAGTTGTATTCAATGCGCTTATTACTGCATGTGGTCAATCAGGAGCAGTTGATCGTGCTTTTGATGTCTTAGGAGAGATGATGGCAGAAACACAACCTATAGAACCTGATCACACAACTGTCGGTGCACTAATAAAGGCATGTGCAAATGCTGGTCAGGTTGATCGAGCACGGGAAGTATATAAGATGGTCCACAAATATAAGATAAAGGGCTCCTCCGAGGTTTACACCATAGCTGTTAACTGTTGCAGCCAGACAGGTGATTGGGAGTTTGCGTGCAATGTGTATAGTGATATGACTAGGAAAGGCGTGGTCCCTGATGAGATGTTTCTCAGTGCATTAATAGATGTTGCTGGGCATGTTGGAAAACTAGATGCTGCCTTTGAAATCCTACAAGAAGCTAGAAATCAAGGAATACAAGTTGGAACTGTATCATACAGCTCATTGATGGGAGCCTGTAGCAATGCCAAAAACTGGCATAAAGCACTGGAGCTCTATGAATATCTCAAATCCACTAAAATTGAGAAAACTGTTTCAACTGTCAATGCTTTGATCACTGCCCTGTGTGATGGGGATCAACTACAGAAGGCTATGGAAGTTCTATCCGAAATGAAAGGATTTGGATTGCATCCCAACAGCATAACATACTCCATACTTCTAGTGGCAAGTGAAAAAAAGGATGATCTAGAAGCTGGCCACATGCTCCTTTCTCAAGCCGAAAAGGATGGGGTTGCTCCAAACCTTGTCATGTGTAGATGCATCATTGGCATGTGCTTGCGGAGATCTGAGAAGGCATGCTCACTTGGTGAACCTGTCTTGTCGCGTGATCGACCACAAGTTGATAGCAAATGGGCATCACTGGCCTTAATGGTCTACCGCAAAACGATTGTAGCTGGGATTATGCCTACCGTTGAAGTTATATCTCAAGTTTTGGGATGCTTGCAGCTCCCTTACGATGCATCATTCAAGAATAGACTTATTGAGAATCTTGGTGTAACTGCCGAGACATCAAGACCTTCAAACCTATGTTCATTGATAGATGGGTTTGGTGAATATGACCCTCGTGCTTTTTCATTACTTGAGGAAGCTGCATCTCTTGGAATTGTTCCATGTGTATCCTTCAAAGCAAGTCCTGTTGTTGTTGATGCAAGGAAGTTGCAACTTCACACTGCTGAGGTCTTCATCTTGACTGTTCTAAAAGGTCTCAAACATCGGCTTGCTGCTGGTGCAAAGTTACCCAACATGACCATTTTACTGCCCGTAGAGAAGACACAAATTATGTCTCCGAAAGGGAAGACAATCAACATTGCAGGAAGGGTTGGCCAGTCAGTTGCAGCGTTATTGAGAAGGCTTGGGATACCTTACCAAGGAAATGAATCACGTGGAAAAATAAAAATCAGTGGGTTGGCCATGAAAAGATGGCTTCAGCCAAAGCTTGCTTCTTTCACTGGAAAACCAGGAGAATTCGGCTCATCCCAGTTACAATTAGGGAAAGGAATCACACATCAGCAGCGCAACATTCGAACTGGCAATCTGTCCTTGGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010468 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0016070 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043487 GO:0043488 GO:0043489 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045934 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902369 GO:1902373 GO:1903311 GO:1903312

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

1061

Amino Acids

116.39

Weight (kDa)

8.37

Isoelectric Point (pI)

44.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34830
fragaria_vesca	FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240
malus_domestica	MD05G1113900.v1.1
prunus_persica	Prupe.8G158300_v2.0.a1 Prupe.8G158300_v2.0.a1 Prupe.8G158300_v2.0.a1
pyrus_communis	pycom05g10870 pycom10g10060
rosa_chinensis	RchiOBHm_Chr6g0245931
rosa_laevigata	RLG00000015285
rosa_multiflora	Rmu_co8211740.1_g000001 Rmu_sc0005570.1_g000001 Rmu_sc0018377.1_g000001 Rmu_sc0018378.1_g000004
rosa_roxburghii	Rroxscaffold_7G00215060
rosa_rugosa	Rorug05G0517500
rosa_samantha	Rh6AG031800 Rh6BG028200 Rh6CG028200 Rh6DG027500
rosa_wichuraiana	Rw6G002660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	483
AccB1I	GGYRCC	1 cut(s)	454
AccB7I	CCANNNNNTGG	1 cut(s)	2109
AccBSI	CCGCTC	2 cut(s)	142, 577
AccI	GTMKAC	2 cut(s)	294, 2508
AccII	CGCG	2 cut(s)	399, 2458
AclWI	GGATC	2 cut(s)	593, 2217
AcoI	YGGCCR	7 cut(s)	124, 183, 305, 1581, 2329, 2956, 3042
AcsI	RAATTY	2 cut(s)	1057, 3098
AcuI	CTGAAG	3 cut(s)	603, 663, 3044
AcvI	CACGTG	1 cut(s)	3017
AcyI	GRCGYC	1 cut(s)	366
AdeI	CACNNNGTG	1 cut(s)	2441
AfaI	GTAC	2 cut(s)	798, 1327
AfiI	CCNNNNNNNGG	5 cut(s)	146, 181, 187, 2109, 3002
AflIII	ACRYGT	1 cut(s)	831
AgeI	ACCGGT	1 cut(s)	457
AjnI	CCWGG	2 cut(s)	180, 3091
AjuI	GAANNNNNNNTTGG	2 cut(s)	3058, 3090
Alw21I	GWGCWC	4 cut(s)	351, 1765, 1807, 2130
Alw26I	GTCTC	8 cut(s)	137, 289, 357, 495, 851, 2633, 2843, 2922
Alw44I	GTGCAC	1 cut(s)	1761
AlwI	GGATC	2 cut(s)	593, 2217
ApaLI	GTGCAC	1 cut(s)	1761
ApoI	RAATTY	2 cut(s)	1057, 3098
AseI	ATTAAT	3 cut(s)	626, 686, 1976
AsiGI	ACCGGT	1 cut(s)	457
Asp700I	GAANNNNTTC	1 cut(s)	825
AspLEI	GCGC	4 cut(s)	484, 499, 1654, 3150
AspS9I	GGNCC	4 cut(s)	190, 235, 1825, 1948
AsuC2I	CCSGG	2 cut(s)	187, 1403
AsuHPI	GGTGA	6 cut(s)	644, 708, 826, 1907, 2453, 2696
AsuII	TTCGAA	1 cut(s)	3157
AvaII	GGWCC	4 cut(s)	190, 235, 1825, 1948
BaeGI	GKGCMC	2 cut(s)	1549, 1765
BalI	TGGCCA	5 cut(s)	126, 1583, 2331, 2958, 3044
BanI	GGYRCC	1 cut(s)	454
BanII	GRGCYC	3 cut(s)	351, 1850, 2130
BauI	CACGAG	1 cut(s)	2697
BbrPI	CACGTG	1 cut(s)	3017
BbsI	GAAGAC	3 cut(s)	2806, 2909, 2936
Bbv12I	GWGCWC	4 cut(s)	351, 1765, 1807, 2130
BbvCI	CCTCAGC	1 cut(s)	2808
BciT130I	CCWGG	2 cut(s)	182, 3093
BciVI	GTATCC	2 cut(s)	2761, 2985
BclI	TGATCA	2 cut(s)	1744, 2187
BcnI	CCSGG	2 cut(s)	187, 1403
BcoDI	GTCTC	8 cut(s)	137, 289, 357, 495, 851, 2633, 2843, 2922
BfaI	CTAG	8 cut(s)	336, 786, 1169, 1935, 2006, 2037, 2294, 2321
BfmI	CTRYAG	7 cut(s)	729, 867, 960, 969, 1734, 2092, 2216
BfuI	GTATCC	2 cut(s)	2761, 2985
BglII	AGATCT	2 cut(s)	1114, 2417
Bme1390I	CCNGG	4 cut(s)	182, 187, 1403, 3093
Bme18I	GGWCC	4 cut(s)	190, 235, 1825, 1948
BmgT120I	GGNCC	4 cut(s)	190, 235, 1825, 1948
BmiI	GGNNCC	6 cut(s)	191, 237, 456, 1849, 1950, 2089
BmrFI	CCNGG	4 cut(s)	182, 187, 1403, 3093
BmrI	ACTGGG	2 cut(s)	1069, 3106
BmuI	ACTGGG	2 cut(s)	1069, 3106
BpiI	GAAGAC	3 cut(s)	2806, 2909, 2936
BpmI	CTGGAG	2 cut(s)	1536, 2144
Bpu10I	CCTNAGC	1 cut(s)	2808
Bpu14I	TTCGAA	1 cut(s)	3157
BpuEI	CTTGAG	5 cut(s)	1342, 1347, 2331, 2544, 2735
BpuMI	CCSGG	2 cut(s)	187, 1403
BsaAI	YACGTR	1 cut(s)	3017
BsaBI	GATNNNNATC	2 cut(s)	597, 2208
BsaHI	GRCGYC	1 cut(s)	366
BsaI	GGTCTC	1 cut(s)	2843
BsaJI	CCNNGG	6 cut(s)	112, 186, 1584, 1854, 3001, 3174
BsaWI	WCCGGW	1 cut(s)	457
BsaXI	ACNNNNNCTCC	4 cut(s)	182, 212, 1895, 1925
Bsc4I	CCNNNNNNNGG	5 cut(s)	146, 181, 187, 2109, 3002
Bse118I	RCCGGY	1 cut(s)	457
Bse1I	ACTGG	8 cut(s)	1075, 2114, 2127, 2499, 2959, 3088, 3112, 3166
Bse3DI	GCAATG	3 cut(s)	1921, 2104, 2940
Bse8I	GATNNNNATC	2 cut(s)	597, 2208
BseBI	CCWGG	2 cut(s)	182, 3093
BseDI	CCNNGG	6 cut(s)	112, 186, 1584, 1854, 3001, 3174
BseGI	GGATG	6 cut(s)	1165, 2263, 2320, 2365, 2576, 3107
BseJI	GATNNNNATC	2 cut(s)	597, 2208
BseLI	CCNNNNNNNGG	5 cut(s)	146, 181, 187, 2109, 3002
BseMI	GCAATG	3 cut(s)	1921, 2104, 2940
BseMII	CTCAG	7 cut(s)	364, 540, 572, 846, 1981, 2412, 2799
BseNI	ACTGG	8 cut(s)	1075, 2114, 2127, 2499, 2959, 3088, 3112, 3166
BseRI	GAGGAG	4 cut(s)	39, 70, 73, 1840
BseSI	GKGCMC	2 cut(s)	1549, 1765
BseYI	CCCAGC	3 cut(s)	1571, 1988, 2528
Bsh1236I	CGCG	2 cut(s)	399, 2458
Bsh1285I	CGRYCG	1 cut(s)	140
BshNI	GGYRCC	1 cut(s)	454
BshTI	ACCGGT	1 cut(s)	457
BsiEI	CGRYCG	1 cut(s)	140
BsiHKAI	GWGCWC	4 cut(s)	351, 1765, 1807, 2130
BsiSI	CCGG	4 cut(s)	147, 186, 458, 1402
BslFI	GGGAC	3 cut(s)	203, 1078, 1934
BslI	CCNNNNNNNGG	5 cut(s)	146, 181, 187, 2109, 3002
BsmAI	GTCTC	8 cut(s)	137, 289, 357, 495, 851, 2633, 2843, 2922
BsmBI	CGTCTC	2 cut(s)	357, 851
BsmFI	GGGAC	3 cut(s)	203, 1078, 1934
BsmI	GAATGC	1 cut(s)	241
Bso31I	GGTCTC	1 cut(s)	2843
Bsp119I	TTCGAA	1 cut(s)	3157
Bsp1286I	GDGCHC	6 cut(s)	351, 1549, 1765, 1807, 1850, 2130
BspCNI	CTCAG	7 cut(s)	363, 541, 571, 847, 1980, 2413, 2800
BspFNI	CGCG	2 cut(s)	399, 2458
BspHI	TCATGA	1 cut(s)	1498
BspLI	GGNNCC	6 cut(s)	191, 237, 456, 1849, 1950, 2089
BspPI	GGATC	2 cut(s)	593, 2217
BspQI	GCTCTTC	1 cut(s)	816
BspT104I	TTCGAA	1 cut(s)	3157
BspT107I	GGYRCC	1 cut(s)	454
BspTNI	GGTCTC	1 cut(s)	2843
BsrBI	CCGCTC	2 cut(s)	142, 577
BsrDI	GCAATG	3 cut(s)	1921, 2104, 2940
BsrFI	RCCGGY	1 cut(s)	457
BsrI	ACTGG	8 cut(s)	1075, 2114, 2127, 2499, 2959, 3088, 3112, 3166
BssAI	RCCGGY	1 cut(s)	457
BssECI	CCNNGG	6 cut(s)	112, 186, 1584, 1854, 3001, 3174
BssNI	GRCGYC	1 cut(s)	366
BssSI	CACGAG	1 cut(s)	2697
BssT1I	CCWWGG	3 cut(s)	1584, 3001, 3174
Bst2BI	CACGAG	1 cut(s)	2697
Bst2UI	CCWGG	2 cut(s)	182, 3093
Bst6I	CTCTTC	2 cut(s)	606, 816
BstACI	GRCGYC	1 cut(s)	366
BstBAI	YACGTR	1 cut(s)	3017
BstBI	TTCGAA	1 cut(s)	3157
BstC8I	GCNNGC	9 cut(s)	386, 874, 1912, 2329, 2411, 2431, 2576, 2853, 3072
BstENI	CCTNNNNNAGG	1 cut(s)	3000
BstF5I	GGATG	6 cut(s)	1165, 2263, 2320, 2365, 2576, 3107
BstFNI	CGCG	2 cut(s)	399, 2458
BstHHI	GCGC	4 cut(s)	484, 499, 1654, 3150
BstMAI	GTCTC	8 cut(s)	137, 289, 357, 495, 851, 2633, 2843, 2922
BstMCI	CGRYCG	1 cut(s)	140
BstMWI	GCNNNNNNNGC	9 cut(s)	123, 156, 532, 574, 984, 1595, 2400, 2495, 2861
BstNI	CCWGG	2 cut(s)	182, 3093
BstNSI	RCATGY	8 cut(s)	835, 1458, 1668, 1779, 1997, 2338, 2407, 2433
BstSCI	CCNGG	4 cut(s)	180, 185, 1401, 3091
BstSFI	CTRYAG	7 cut(s)	729, 867, 960, 969, 1734, 2092, 2216
BstSLI	GKGCMC	2 cut(s)	1549, 1765
BstUI	CGCG	2 cut(s)	399, 2458
BstV2I	GAAGAC	3 cut(s)	2806, 2909, 2936
BstX2I	RGATCY	2 cut(s)	1114, 2417
BstXI	CCANNNNNNTGG	1 cut(s)	1091
BstYI	RGATCY	2 cut(s)	1114, 2417
BsuI	GTATCC	2 cut(s)	2761, 2985
BtgZI	GCGATG	2 cut(s)	179, 780
BtsCI	GGATG	6 cut(s)	1165, 2263, 2320, 2365, 2576, 3107
BtsI	GCAGTG	4 cut(s)	528, 1018, 2190, 2802
Cac8I	GCNNGC	9 cut(s)	386, 874, 1912, 2329, 2411, 2431, 2576, 2853, 3072
CciI	TCATGA	1 cut(s)	1498
CfoI	GCGC	4 cut(s)	484, 499, 1654, 3150
Cfr10I	RCCGGY	1 cut(s)	457
Cfr13I	GGNCC	4 cut(s)	190, 235, 1825, 1948
CseI	GACGC	1 cut(s)	374
Csp6I	GTAC	2 cut(s)	797, 1326
CspAI	ACCGGT	1 cut(s)	457
CspCI	CAANNNNNGTGG	2 cut(s)	2137, 2172
CviQI	GTAC	2 cut(s)	797, 1326
DraI	TTTAAA	1 cut(s)	1182
DraIII	CACNNNGTG	1 cut(s)	2441
EaeI	YGGCCR	7 cut(s)	124, 183, 305, 1581, 2329, 2956, 3042
Eam1104I	CTCTTC	2 cut(s)	606, 816
EarI	CTCTTC	2 cut(s)	606, 816
EciI	GGCGGA	1 cut(s)	944
Ecl136II	GAGCTC	2 cut(s)	349, 2128
Eco130I	CCWWGG	3 cut(s)	1584, 3001, 3174
Eco147I	AGGCCT	1 cut(s)	227
Eco24I	GRGCYC	3 cut(s)	351, 1850, 2130
Eco31I	GGTCTC	1 cut(s)	2843
Eco32I	GATATC	1 cut(s)	1449
Eco47I	GGWCC	4 cut(s)	190, 235, 1825, 1948
Eco53kI	GAGCTC	2 cut(s)	349, 2128
Eco57I	CTGAAG	3 cut(s)	603, 663, 3044
Eco72I	CACGTG	1 cut(s)	3017
EcoICRI	GAGCTC	2 cut(s)	349, 2128
EcoNI	CCTNNNNNAGG	1 cut(s)	3000
EcoRI	GAATTC	2 cut(s)	1057, 3098
EcoRII	CCWGG	2 cut(s)	180, 3091
EcoRV	GATATC	1 cut(s)	1449
EcoT14I	CCWWGG	3 cut(s)	1584, 3001, 3174
EcoT22I	ATGCAT	2 cut(s)	2396, 2596
EcoT38I	GRGCYC	3 cut(s)	351, 1850, 2130
ErhI	CCWWGG	3 cut(s)	1584, 3001, 3174
Esp3I	CGTCTC	2 cut(s)	357, 851
FaqI	GGGAC	3 cut(s)	203, 1078, 1934
FauI	CCCGC	2 cut(s)	246, 992
FauNDI	CATATG	1 cut(s)	1540
FbaI	TGATCA	2 cut(s)	1744, 2187
FblI	GTMKAC	2 cut(s)	294, 2508
FokI	GGATG	6 cut(s)	1172, 2250, 2327, 2372, 2583, 3094
FriOI	GRGCYC	3 cut(s)	351, 1850, 2130
FspBI	CTAG	8 cut(s)	336, 786, 1169, 1935, 2006, 2037, 2294, 2321
FspI	TGCGCA	1 cut(s)	483
GlaI	GCGC	4 cut(s)	483, 498, 1653, 3149
GsaI	CCCAGC	3 cut(s)	1575, 1992, 2532
GsuI	CTGGAG	2 cut(s)	1536, 2144
HapII	CCGG	4 cut(s)	147, 186, 458, 1402
HgaI	GACGC	1 cut(s)	374
HhaI	GCGC	4 cut(s)	484, 499, 1654, 3150
Hin1I	GRCGYC	1 cut(s)	366
Hin6I	GCGC	4 cut(s)	482, 497, 1652, 3148
HinP1I	GCGC	4 cut(s)	482, 497, 1652, 3148
HincII	GTYRAC	3 cut(s)	555, 1279, 1876
HindII	GTYRAC	3 cut(s)	555, 1279, 1876
HindIII	AAGCTT	5 cut(s)	874, 945, 1284, 1377, 3068
HpaI	GTTAAC	1 cut(s)	1876
HpaII	CCGG	4 cut(s)	147, 186, 458, 1402
HphI	GGTGA	6 cut(s)	644, 708, 826, 1907, 2453, 2696
Hpy99I	CGWCG	4 cut(s)	257, 260, 263, 293
HpyCH4IV	ACGT	1 cut(s)	3016
HpyF10VI	GCNNNNNNNGC	9 cut(s)	123, 156, 532, 574, 984, 1595, 2400, 2495, 2861
HpySE526I	ACGT	1 cut(s)	3016
Hsp92I	GRCGYC	1 cut(s)	366
HspAI	GCGC	4 cut(s)	482, 497, 1652, 3148
Ksp22I	TGATCA	2 cut(s)	1744, 2187
KspAI	GTTAAC	1 cut(s)	1876
LguI	GCTCTTC	1 cut(s)	816
LmnI	GCTCC	8 cut(s)	203, 1679, 1853, 2087, 2125, 2343, 2374, 2586
MaeI	CTAG	8 cut(s)	336, 786, 1169, 1935, 2006, 2037, 2294, 2321
MaeII	ACGT	1 cut(s)	3016
MaeIII	GTNAC	6 cut(s)	268, 656, 919, 2629, 2868, 3114
MbiI	CCGCTC	2 cut(s)	142, 577
MflI	RGATCY	2 cut(s)	1114, 2417
MhlI	GDGCHC	6 cut(s)	351, 1549, 1765, 1807, 1850, 2130
MlsI	TGGCCA	5 cut(s)	126, 1583, 2331, 2958, 3044
MluNI	TGGCCA	5 cut(s)	126, 1583, 2331, 2958, 3044
MlyI	GAGTC	5 cut(s)	497, 550, 851, 974, 1169
MmeI	TCCRAC	5 cut(s)	160, 1197, 1340, 1978, 2038
Mox20I	TGGCCA	5 cut(s)	126, 1583, 2331, 2958, 3044
Mph1103I	ATGCAT	2 cut(s)	2396, 2596
MroXI	GAANNNNTTC	1 cut(s)	825
MscI	TGGCCA	5 cut(s)	126, 1583, 2331, 2958, 3044
MslI	CAYNNNNRTG	5 cut(s)	917, 1089, 1104, 1539, 2402
Msp20I	TGGCCA	5 cut(s)	126, 1583, 2331, 2958, 3044
MspI	CCGG	4 cut(s)	147, 186, 458, 1402
MspR9I	CCNGG	4 cut(s)	182, 187, 1403, 3093
Mva1269I	GAATGC	1 cut(s)	241
MvaI	CCWGG	2 cut(s)	182, 3093
MvnI	CGCG	2 cut(s)	399, 2458
MwoI	GCNNNNNNNGC	9 cut(s)	123, 156, 532, 574, 984, 1595, 2400, 2495, 2861
NciI	CCSGG	2 cut(s)	187, 1403
NdeI	CATATG	1 cut(s)	1540
NlaIV	GGNNCC	6 cut(s)	191, 237, 456, 1849, 1950, 2089
NmeAIII	GCCGAG	2 cut(s)	93, 2662
NmuCI	GTSAC	2 cut(s)	656, 919
NsbI	TGCGCA	1 cut(s)	483
NsiI	ATGCAT	2 cut(s)	2396, 2596
NspI	RCATGY	8 cut(s)	835, 1458, 1668, 1779, 1997, 2338, 2407, 2433
NspV	TTCGAA	1 cut(s)	3157
PaeI	GCATGC	1 cut(s)	2433
PagI	TCATGA	1 cut(s)	1498
PceI	AGGCCT	1 cut(s)	227
PciI	ACATGT	1 cut(s)	831
PciSI	GCTCTTC	1 cut(s)	816
PcsI	WCGNNNNNNNCGW	1 cut(s)	264
PctI	GAATGC	1 cut(s)	241
PdmI	GAANNNNTTC	1 cut(s)	825
PflMI	CCANNNNNTGG	1 cut(s)	2109
PfoI	TCCNGGA	1 cut(s)	1401
PinAI	ACCGGT	1 cut(s)	457
PleI	GAGTC	5 cut(s)	496, 550, 850, 973, 1169
PmaCI	CACGTG	1 cut(s)	3017
PmlI	CACGTG	1 cut(s)	3017
PpsI	GAGTC	5 cut(s)	496, 550, 850, 973, 1169
Ppu21I	YACGTR	1 cut(s)	3017
PscI	ACATGT	1 cut(s)	831
PshBI	ATTAAT	3 cut(s)	626, 686, 1976
Psp124BI	GAGCTC	2 cut(s)	351, 2130
Psp6I	CCWGG	2 cut(s)	180, 3091
PspCI	CACGTG	1 cut(s)	3017
PspFI	CCCAGC	3 cut(s)	1571, 1988, 2528
PspGI	CCWGG	2 cut(s)	180, 3091
PspN4I	GGNNCC	6 cut(s)	191, 237, 456, 1849, 1950, 2089
PspPI	GGNCC	4 cut(s)	190, 235, 1825, 1948
PsuI	RGATCY	2 cut(s)	1114, 2417
RsaI	GTAC	2 cut(s)	798, 1327
RsaNI	GTAC	2 cut(s)	797, 1326
RseI	CAYNNNNRTG	5 cut(s)	917, 1089, 1104, 1539, 2402
SacI	GAGCTC	2 cut(s)	351, 2130
SapI	GCTCTTC	1 cut(s)	816
Sau96I	GGNCC	4 cut(s)	190, 235, 1825, 1948
SchI	GAGTC	5 cut(s)	497, 550, 851, 974, 1169
ScrFI	CCNGG	4 cut(s)	182, 187, 1403, 3093
SduI	GDGCHC	6 cut(s)	351, 1549, 1765, 1807, 1850, 2130
SfcI	CTRYAG	7 cut(s)	729, 867, 960, 969, 1734, 2092, 2216
SfuI	TTCGAA	1 cut(s)	3157
SgrAI	CRCCGGYG	1 cut(s)	457
SinI	GGWCC	4 cut(s)	190, 235, 1825, 1948
SmiMI	CAYNNNNRTG	5 cut(s)	917, 1089, 1104, 1539, 2402
SmlI	CTYRAG	5 cut(s)	1321, 1362, 2346, 2559, 2714
SmoI	CTYRAG	5 cut(s)	1321, 1362, 2346, 2559, 2714
SphI	GCATGC	1 cut(s)	2433
SseBI	AGGCCT	1 cut(s)	227
SspMI	CTAG	8 cut(s)	336, 786, 1169, 1935, 2006, 2037, 2294, 2321
SstI	GAGCTC	2 cut(s)	351, 2130
StuI	AGGCCT	1 cut(s)	227
StyD4I	CCNGG	4 cut(s)	180, 185, 1401, 3091
StyI	CCWWGG	3 cut(s)	1584, 3001, 3174
TaiI	ACGT	1 cut(s)	3019
TaqI	TCGA	7 cut(s)	209, 330, 845, 1636, 1801, 2464, 3157
TatI	WGTACW	2 cut(s)	796, 1325
TseFI	GTSAC	2 cut(s)	656, 919
Tsp45I	GTSAC	2 cut(s)	656, 919
TspGWI	ACGGA	3 cut(s)	277, 447, 1280
Van91I	CCANNNNNTGG	1 cut(s)	2109
VneI	GTGCAC	1 cut(s)	1761
VpaK11BI	GGWCC	4 cut(s)	190, 235, 1825, 1948
VspI	ATTAAT	3 cut(s)	626, 686, 1976
XagI	CCTNNNNNAGG	1 cut(s)	3000
XapI	RAATTY	2 cut(s)	1057, 3098
XbaI	TCTAGA	1 cut(s)	2320
XceI	RCATGY	8 cut(s)	835, 1458, 1668, 1779, 1997, 2338, 2407, 2433
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2293
XmiI	GTMKAC	2 cut(s)	294, 2508
XmnI	GAANNNNTTC	1 cut(s)	825
XspI	CTAG	8 cut(s)	336, 786, 1169, 1935, 2006, 2037, 2294, 2321
Zsp2I	ATGCAT	2 cut(s)	2396, 2596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.