Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004157

Physical Location & Seq

Genomic Coordinates Reverse (-)

14333834 .. 14342807

Gene Structure 8974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g10870.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3132 bp

ATGAGCTTCTCCGCGAAGCCTCAAGCCCTAACCCTAATCTCATGCACTCCTCTCTCTTCTTCTTCCTCTTCCCATCGCCGATCGATTCGTAGAGACTTTCTCGGCTGCGGCCAGAGCCTCCGCCCGCTCGCCGGCGGTCTCCGCTCCCATAGAGAACGCAGGAGCTTGGACGGAGGTCACCGCTCTCCTCCCTCGAAGTTTCTCATCAGAGCTTCTCTGGATTCGCATTCCCTCCTAGTCGTGGTCGCCGTCGTCACCTTCTCTGCTGCCTCCGTCGTCTACTTCAATCGCTCCGTCAAGCCCCGGAAGAATTTTAATGTTGGGGGAAGAGAGATTAGGGAGGTTAACGGTAAAGCTCCGATTGAAGAGAATCAGATTCTTGGTTTTGATGGTTTGAGCGGCAAAGTTGAAGAAATTGAGACGCCGGCGCCGACGCCGGTGCTGCAATTTCACAATTCAGCGCAGGAGTCGCTTTCTCCTTTGGTGTTCGAATCAACCGCGGTGTTTGAACCGCTTCGTTTCTCTGCAGAGTTGGCACAGCTGCAGCAACAGGAACGGTCTGAATGTGTTGATTACGACCCAATTTCTGAGGAGTTCTCCAAATTAGTAGGCGAATCTAATTTCGGCGTGGCTTTGGAGCCTGATTCTCTGAGTGATGAGGAAACCGATGAAGGCGATGAAGAAGATGAAGTGGATGAAGTCAGTGAAGTGGGTGAAGCTACTGGATTTCCTTTGCTTCATAGAGAATCAGTGAGGGAAGAGCTTCACATGTTTTATGAGGGAAACAAGTCCGAGACAAAATCAGAAGCAAGCATGAATGGTAAAAAATTATCTTCATTTTTACGAAACAGCACTATGACAGGGGCCGGTTTACTGCCACAAGTTTCCGATCACACTACAGAGTCTATGGAAGGAAAGATAGATGGTGCTAGTTATAAAGGAGTTAACAGCAGAAAGGACTTGGGAAATGGCAGTGGATATTCAAGCGACCAAGAAGTAAGACATTCGGCTACCCAGATTCCCCATCCAAATGGTGTTCTTACAAATGACAGAGATATTCTATCAGAGCAATTAGGTGCCTACCATCGTTTGCTTAAGGATGGGAGGTTAGCCGACTCTCTAAAGTTGCTTGAAGATTTGCAAAGAAGGGGTTTGTTGGATATGAATAAGGTTTATCATGCAAGGTTTTTTGAAAACTGCAAATCGAAAAAGGCTGTTGATGAAGCTTTTCGTTTCATTGAACTGATTCCAAATCCAACATTGAGTACATACAATATGCTCATGACTGTCTGTGCAAGTTCTCAAGATTCAGAGGGAGCTTTCCAAGTTGTGAGACTTGCTCGGGAGGCTGGACTGAAGCCCGACTGCAAACTTTACACCACTCTGATATCAACATGCGGTAAAAGTGGAAAAGTGTACACGATGTTTGATGTCTTCCATGAGATGGTTAATGCTGGAGTAGAGCCAAACGTTCACACATATGGGGCACTGATTGATGGTTGTGGCAGAGCTGGGGAAGTGGCCAAGGCATTTGGTGCTTATGGGATAATGAGGTCTAAGAAAGTGAAGCCAGACCGAGTTGTATTCAATGCGCTTATTACTGCATGTGGTCAATCAGGAGCAGTTGATCGTGCCTTTGATGTTTTAGGAGAAATGCTGGCAGAAACACAACCTATAGAACCTGATCACACTACCGTCGGTGCTCTGATAAAGGCATGCGCAAATGCTGGTCAGGTTGATCGGGCACGAGAAGTATATAAGTTGGTCCATAAATATAAGATAAGGGGCTCCTCTGAGGTTTACACCATAGCTGTTAATTCTTGCAGCCAGACAGGTGATTGGGAATTTGCTTGCAATGTGTATAGTGACATGACTAGTAAAGGCGTGGTCCCTGATGAGATGTTTCTCAGTGCACTAATAGATGTTGCTGGGCATGCTGGAAAGCTAGATGCTGCCTTTGGTATCCTACACGAAGCTAGAAATCGGGGAATACAAGTTGGAACTGTATCTTACAGCTCATTGATGGGAGCCTGTAGCAATGCTAAAAACTGGCAGAAAGCACTGGAGCTCTATGAGTATCTCAAGTACACCAAAATTGAGCAATCTGTTTCAACCGTCAATGCTTTAATCACTGCCTTGTGTGACGGGGATCAACTACAGAAGGCTATGGAAGTTCTATCGCAAATGAAGGGATTAGGATTGCGTCCAAACAGCATAACATACTCCATACTTATGGTGGCAAGTGAAAAAAAGGATGACCTAGAATCTGGCCAAATGCTCCTTTCTCAAGCCGAAAAGGATGGGGTTGCTCCAAACCTTGTCATGTGTAGATGCATTATTGGCATGTGCTTACGGAGATCTGAGAAGGCATGTGCACTTGGTGAACCTGCTTTGTCGGTTGATCGGCCTCAAGTTGATAGTGAATGGGCATCTTTGGCCTTAATGGTCTACCGCAAAACTATTGTAGCTGGTAATGTTCCCACCATTGAAGTTATATCACAAGTCTTGGGATGCTTGCAGCTCCCTTACGATGCATCATTCAAGAATAGGCTTATAGAGAATCTTGGTGTATCTGCCGACACATCAAGACCTTCAAGACCTTCAAACCTTTGTTCATTGATAGATGGGTTTGGTGAATATGACCCTCGTGCATTCTCATTACTGGAGGAAGCTGCTTCACTTGGAATTGTTCCATGTGTATCCTTCAAAGCAAGTCCTGTTGTTATTGACGCAAGGAAGTTGCAAATGCATACTGCGGAGGTTTACATCTTGACCGTTTTGAGAGGTCTCAGACATCGACTTGCTGCTGGTGCAAAGTTACCCAACATGACCATTTTACTGCCTGTAGAGAAGACACAAATTGTGTCTACTAAGGGGAAGACAATCAACATTGCCGGAAGGATTGGGCAGTCAGTTGCAGCATTATTAAGAAGGCTTGGGTTACCATACCAAGGAAATGAATCACATGGAAAAATTAAAATCAATGGGTTAGCCATGAAAAGATGGTTTCAACCAAAGCTTGCTTCTTTCACTGGAAAACCAGGAGAATTTGGCTCCTCGCAGTTACAGCTGGGGAAGGGAATCACACACCAGCAGCGGGACATTCGAACTGGCAATCTGTCCTTGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010468 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0016070 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043487 GO:0043488 GO:0043489 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045934 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902369 GO:1902373 GO:1903311 GO:1903312

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

1044

Amino Acids

113.85

Weight (kDa)

6.47

Isoelectric Point (pI)

42.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34830
fragaria_vesca	FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240 FvH4_2g02240
malus_domestica	MD05G1113900.v1.1
prunus_persica	Prupe.8G158300_v2.0.a1 Prupe.8G158300_v2.0.a1 Prupe.8G158300_v2.0.a1
pyrus_communis	pycom05g10870 pycom10g10060
rosa_chinensis	RchiOBHm_Chr6g0245931
rosa_laevigata	RLG00000015285
rosa_multiflora	Rmu_co8211740.1_g000001 Rmu_sc0005570.1_g000001 Rmu_sc0018377.1_g000001 Rmu_sc0018378.1_g000004
rosa_roxburghii	Rroxscaffold_7G00215060
rosa_rugosa	Rorug05G0517500
rosa_samantha	Rh6AG031800 Rh6BG028200 Rh6CG028200 Rh6DG027500
rosa_wichuraiana	Rw6G002660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	936
Acc16I	TGCGCA	1 cut(s)	1720
Acc36I	ACCTGC	1 cut(s)	2395
AccB1I	GGYRCC	2 cut(s)	427, 1076
AccB7I	CCANNNNNTGG	1 cut(s)	1444
AccBSI	CCGCTC	4 cut(s)	127, 144, 183, 399
AccI	GTMKAC	3 cut(s)	279, 2448, 2867
AccII	CGCG	2 cut(s)	14, 500
AclI	AACGTT	1 cut(s)	1470
AclWI	GGATC	1 cut(s)	2157
AcoI	YGGCCR	3 cut(s)	109, 1521, 2269
AcsI	RAATTY	3 cut(s)	310, 1844, 3047
AcuI	CTGAAG	1 cut(s)	1376
AcyI	GRCGYC	3 cut(s)	422, 428, 434
AdeI	CACNNNGTG	1 cut(s)	2381
AfaI	GTAC	3 cut(s)	1267, 1418, 2087
AfiI	CCNNNNNNNGG	5 cut(s)	131, 241, 1444, 2951, 3097
AflII	CTTAAG	1 cut(s)	1094
AflIII	ACRYGT	1 cut(s)	768
AhlI	ACTAGT	1 cut(s)	1874
AjnI	CCWGG	1 cut(s)	3040
AjuI	GAANNNNNNNTTGG	2 cut(s)	3007, 3039
Alw21I	GWGCWC	4 cut(s)	1705, 1915, 2070, 2377
Alw26I	GTCTC	6 cut(s)	87, 143, 413, 788, 1327, 2792
Alw44I	GTGCAC	2 cut(s)	1911, 2373
AlwI	GGATC	1 cut(s)	2157
Ama87I	CYCGRG	1 cut(s)	1341
AoxI	GGCC	6 cut(s)	109, 864, 1521, 2269, 2405, 2436
ApaLI	GTGCAC	2 cut(s)	1911, 2373
ApoI	RAATTY	3 cut(s)	310, 1844, 3047
Asp700I	GAANNNNTTC	4 cut(s)	513, 762, 1227, 1245
AspLEI	GCGC	4 cut(s)	430, 463, 1594, 1721
AspS9I	GGNCC	3 cut(s)	864, 1765, 1888
AsuC2I	CCSGG	1 cut(s)	304
AsuHPI	GGTGA	6 cut(s)	170, 247, 725, 1847, 2393, 2645
AsuII	TTCGAA	2 cut(s)	489, 3106
AvaI	CYCGRG	1 cut(s)	1341
AvaII	GGWCC	2 cut(s)	1765, 1888
BaeGI	GKGCMC	4 cut(s)	1489, 1747, 1915, 2377
BalI	TGGCCA	2 cut(s)	1523, 2271
BanI	GGYRCC	2 cut(s)	427, 1076
BanII	GRGCYC	2 cut(s)	1790, 2070
BauI	CACGAG	2 cut(s)	1746, 2646
BbsI	GAAGAC	3 cut(s)	1426, 2858, 2885
Bbv12I	GWGCWC	4 cut(s)	1705, 1915, 2070, 2377
BceAI	ACGGC	1 cut(s)	233
BcgI	CGANNNNNNTGC	2 cut(s)	421, 455
BciT130I	CCWGG	1 cut(s)	3042
BciVI	GTATCC	2 cut(s)	1973, 2710
BclI	TGATCA	1 cut(s)	1684
BcnI	CCSGG	1 cut(s)	304
BcoDI	GTCTC	6 cut(s)	87, 143, 413, 788, 1327, 2792
BcuI	ACTAGT	1 cut(s)	1874
BfaI	CTAG	6 cut(s)	236, 930, 1875, 1946, 1977, 2261
BfmI	CTRYAG	7 cut(s)	525, 542, 897, 1674, 2032, 2156, 2844
BfoI	RGCGCY	1 cut(s)	431
BfrI	CTTAAG	1 cut(s)	1094
BfuAI	ACCTGC	1 cut(s)	2395
BfuI	GTATCC	2 cut(s)	1973, 2710
BglII	AGATCT	1 cut(s)	2357
Bme1390I	CCNGG	2 cut(s)	304, 3042
Bme18I	GGWCC	2 cut(s)	1765, 1888
BmeT110I	CYCGRG	1 cut(s)	1341
BmgT120I	GGNCC	3 cut(s)	864, 1765, 1888
BmiI	GGNNCC	8 cut(s)	429, 639, 865, 1078, 1789, 1890, 2029, 3055
BmrFI	CCNGG	2 cut(s)	304, 3042
BmsI	GCATC	6 cut(s)	1939, 2321, 2438, 2501, 2521, 2543
BoxI	GACNNNNGTC	1 cut(s)	174
BpiI	GAAGAC	3 cut(s)	1426, 2858, 2885
BplI	GAGNNNNNCTC	6 cut(s)	84, 116, 581, 613, 1324, 1356
BpmI	CTGGAG	3 cut(s)	1476, 2084, 2684
Bpu14I	TTCGAA	2 cut(s)	489, 3106
BpuEI	CTTGAG	5 cut(s)	6, 1287, 2066, 2271, 2394
BpuMI	CCSGG	1 cut(s)	304
Bsa29I	ATCGAT	1 cut(s)	83
BsaHI	GRCGYC	3 cut(s)	422, 428, 434
BsaI	GGTCTC	2 cut(s)	143, 2792
BsaJI	CCNNGG	5 cut(s)	302, 498, 1524, 2950, 3123
Bsc4I	CCNNNNNNNGG	5 cut(s)	131, 241, 1444, 2951, 3097
Bse118I	RCCGGY	4 cut(s)	131, 424, 436, 866
Bse1I	ACTGG	6 cut(s)	727, 2054, 2067, 2667, 3037, 3115
Bse3DI	GCAATG	3 cut(s)	1861, 2044, 2889
BseBI	CCWGG	1 cut(s)	3042
BseCI	ATCGAT	1 cut(s)	83
BseDI	CCNNGG	5 cut(s)	302, 498, 1524, 2950, 3123
BseGI	GGATG	6 cut(s)	700, 1024, 1105, 2260, 2305, 2516
BseLI	CCNNNNNNNGG	5 cut(s)	131, 241, 1444, 2951, 3097
BseMI	GCAATG	3 cut(s)	1861, 2044, 2889
BseMII	CTCAG	6 cut(s)	579, 641, 1785, 1921, 2352, 2803
BseNI	ACTGG	6 cut(s)	727, 2054, 2067, 2667, 3037, 3115
BseRI	GAGGAG	5 cut(s)	39, 177, 605, 1780, 3046
BseSI	GKGCMC	4 cut(s)	1489, 1747, 1915, 2377
BseYI	CCCAGC	3 cut(s)	1511, 1928, 3070
Bsh1236I	CGCG	2 cut(s)	14, 500
Bsh1285I	CGRYCG	1 cut(s)	83
BshFI	GGCC	6 cut(s)	111, 866, 1523, 2271, 2407, 2438
BshNI	GGYRCC	2 cut(s)	427, 1076
BshVI	ATCGAT	1 cut(s)	83
BsiEI	CGRYCG	1 cut(s)	83
BsiHKAI	GWGCWC	4 cut(s)	1705, 1915, 2070, 2377
BsiHKCI	CYCGRG	1 cut(s)	1341
BsiSI	CCGG	6 cut(s)	132, 304, 425, 437, 867, 2895
BslFI	GGGAC	2 cut(s)	1874, 3113
BslI	CCNNNNNNNGG	5 cut(s)	131, 241, 1444, 2951, 3097
BsmAI	GTCTC	6 cut(s)	87, 143, 413, 788, 1327, 2792
BsmBI	CGTCTC	1 cut(s)	413
BsmFI	GGGAC	2 cut(s)	1874, 3113
BsmI	GAATGC	2 cut(s)	226, 2651
BsnI	GGCC	6 cut(s)	111, 866, 1523, 2271, 2407, 2438
Bso31I	GGTCTC	2 cut(s)	143, 2792
BsoBI	CYCGRG	1 cut(s)	1341
Bsp119I	TTCGAA	2 cut(s)	489, 3106
Bsp1286I	GDGCHC	7 cut(s)	1489, 1705, 1747, 1790, 1915, 2070, 2377
Bsp1407I	TGTACA	1 cut(s)	1416
Bsp143I	GATC	8 cut(s)	80, 889, 1627, 1684, 1738, 2149, 2357, 2401
BspANI	GGCC	6 cut(s)	111, 866, 1523, 2271, 2407, 2438
BspCNI	CTCAG	6 cut(s)	580, 642, 1786, 1920, 2353, 2802
BspDI	ATCGAT	1 cut(s)	83
BspFNI	CGCG	2 cut(s)	14, 500
BspHI	TCATGA	1 cut(s)	1281
BspLI	GGNNCC	8 cut(s)	429, 639, 865, 1078, 1789, 1890, 2029, 3055
BspMAI	CTGCAG	2 cut(s)	529, 546
BspMI	ACCTGC	1 cut(s)	2395
BspPI	GGATC	1 cut(s)	2157
BspQI	GCTCTTC	1 cut(s)	753
BspT104I	TTCGAA	2 cut(s)	489, 3106
BspT107I	GGYRCC	2 cut(s)	427, 1076
BspTI	CTTAAG	1 cut(s)	1094
BspTNI	GGTCTC	2 cut(s)	143, 2792
BsrBI	CCGCTC	4 cut(s)	127, 144, 183, 399
BsrDI	GCAATG	3 cut(s)	1861, 2044, 2889
BsrFI	RCCGGY	4 cut(s)	131, 424, 436, 866
BsrGI	TGTACA	1 cut(s)	1416
BsrI	ACTGG	6 cut(s)	727, 2054, 2067, 2667, 3037, 3115
BssAI	RCCGGY	4 cut(s)	131, 424, 436, 866
BssECI	CCNNGG	5 cut(s)	302, 498, 1524, 2950, 3123
BssMI	GATC	8 cut(s)	80, 889, 1627, 1684, 1738, 2149, 2357, 2401
BssNI	GRCGYC	3 cut(s)	422, 428, 434
BssSI	CACGAG	2 cut(s)	1746, 2646
BssT1I	CCWWGG	3 cut(s)	1524, 2950, 3123
Bst2BI	CACGAG	2 cut(s)	1746, 2646
Bst2UI	CCWGG	1 cut(s)	3042
Bst4CI	ACNGT	7 cut(s)	350, 558, 1288, 1696, 2005, 2116, 2776
Bst6I	CTCTTC	5 cut(s)	61, 73, 322, 360, 753
BstACI	GRCGYC	3 cut(s)	422, 428, 434
BstAFI	CTTAAG	1 cut(s)	1094
BstAPI	GCANNNNNTGC	1 cut(s)	1535
BstAUI	TGTACA	1 cut(s)	1416
BstBI	TTCGAA	2 cut(s)	489, 3106
BstDEI	CTNAG	8 cut(s)	588, 650, 1557, 1794, 1907, 2361, 2789, 2871
BstDSI	CCRYGG	1 cut(s)	498
BstEII	GGTNACC	2 cut(s)	176, 2940
BstF5I	GGATG	6 cut(s)	700, 1024, 1105, 2260, 2305, 2516
BstFNI	CGCG	2 cut(s)	14, 500
BstH2I	RGCGCY	1 cut(s)	431
BstHHI	GCGC	4 cut(s)	430, 463, 1594, 1721
BstKTI	GATC	8 cut(s)	83, 892, 1630, 1687, 1741, 2152, 2360, 2404
BstMAI	GTCTC	6 cut(s)	87, 143, 413, 788, 1327, 2792
BstMBI	GATC	8 cut(s)	80, 889, 1627, 1684, 1738, 2149, 2357, 2401
BstMCI	CGRYCG	1 cut(s)	83
BstNI	CCWGG	1 cut(s)	3042
BstNSI	RCATGY	7 cut(s)	772, 1398, 1608, 1719, 1937, 2347, 2373
BstPAI	GACNNNNGTC	1 cut(s)	174
BstPI	GGTNACC	2 cut(s)	176, 2940
BstSCI	CCNGG	2 cut(s)	302, 3040
BstSFI	CTRYAG	7 cut(s)	525, 542, 897, 1674, 2032, 2156, 2844
BstSLI	GKGCMC	4 cut(s)	1489, 1747, 1915, 2377
BstUI	CGCG	2 cut(s)	14, 500
BstV2I	GAAGAC	3 cut(s)	1426, 2858, 2885
BstX2I	RGATCY	1 cut(s)	2357
BstXI	CCANNNNNNTGG	2 cut(s)	1031, 2233
BstYI	RGATCY	1 cut(s)	2357
Bsu15I	ATCGAT	1 cut(s)	83
BsuI	GTATCC	2 cut(s)	1973, 2710
BsuRI	GGCC	6 cut(s)	111, 866, 1523, 2271, 2407, 2438
BsuTUI	ATCGAT	1 cut(s)	83
BtgI	CCRYGG	1 cut(s)	498
BtgZI	GCGATG	2 cut(s)	59, 690
BtsCI	GGATG	6 cut(s)	700, 1024, 1105, 2260, 2305, 2516
BtsI	GCAGTG	2 cut(s)	979, 2130
BtsIMutI	CAGTG	8 cut(s)	709, 756, 979, 1487, 1915, 2060, 2130, 3030
BveI	ACCTGC	1 cut(s)	2395
CciI	TCATGA	1 cut(s)	1281
CfoI	GCGC	4 cut(s)	430, 463, 1594, 1721
Cfr10I	RCCGGY	4 cut(s)	131, 424, 436, 866
Cfr13I	GGNCC	3 cut(s)	864, 1765, 1888
Cfr42I	CCGCGG	1 cut(s)	501
ClaI	ATCGAT	1 cut(s)	83
CseI	GACGC	4 cut(s)	430, 442, 2192, 2738
Csp6I	GTAC	3 cut(s)	1266, 1417, 2086
CviQI	GTAC	3 cut(s)	1266, 1417, 2086
DdeI	CTNAG	8 cut(s)	588, 650, 1557, 1794, 1907, 2361, 2789, 2871
DinI	GGCGCC	1 cut(s)	429
DpnI	GATC	8 cut(s)	82, 891, 1629, 1686, 1740, 2151, 2359, 2403
DpnII	GATC	8 cut(s)	80, 889, 1627, 1684, 1738, 2149, 2357, 2401
DraIII	CACNNNGTG	1 cut(s)	2381
EaeI	YGGCCR	3 cut(s)	109, 1521, 2269
Eam1104I	CTCTTC	5 cut(s)	61, 73, 322, 360, 753
EarI	CTCTTC	5 cut(s)	61, 73, 322, 360, 753
EciI	GGCGGA	1 cut(s)	110
Ecl136II	GAGCTC	1 cut(s)	2068
Eco130I	CCWWGG	3 cut(s)	1524, 2950, 3123
Eco24I	GRGCYC	2 cut(s)	1790, 2070
Eco31I	GGTCTC	2 cut(s)	143, 2792
Eco32I	GATATC	1 cut(s)	1389
Eco47I	GGWCC	2 cut(s)	1765, 1888
Eco53kI	GAGCTC	1 cut(s)	2068
Eco57I	CTGAAG	1 cut(s)	1376
Eco88I	CYCGRG	1 cut(s)	1341
Eco91I	GGTNACC	2 cut(s)	176, 2940
EcoICRI	GAGCTC	1 cut(s)	2068
EcoO65I	GGTNACC	2 cut(s)	176, 2940
EcoRII	CCWGG	1 cut(s)	3040
EcoRV	GATATC	1 cut(s)	1389
EcoT14I	CCWWGG	3 cut(s)	1524, 2950, 3123
EcoT22I	ATGCAT	3 cut(s)	2336, 2536, 2751
EcoT38I	GRGCYC	2 cut(s)	1790, 2070
EgeI	GGCGCC	1 cut(s)	429
EheI	GGCGCC	1 cut(s)	429
ErhI	CCWWGG	3 cut(s)	1524, 2950, 3123
Esp3I	CGTCTC	1 cut(s)	413
FaqI	GGGAC	2 cut(s)	1874, 3113
FauI	CCCGC	2 cut(s)	132, 3090
FauNDI	CATATG	1 cut(s)	1480
FbaI	TGATCA	1 cut(s)	1684
FblI	GTMKAC	3 cut(s)	279, 2448, 2867
FokI	GGATG	6 cut(s)	707, 1011, 1112, 2267, 2312, 2523
FriOI	GRGCYC	2 cut(s)	1790, 2070
FspBI	CTAG	6 cut(s)	236, 930, 1875, 1946, 1977, 2261
FspI	TGCGCA	1 cut(s)	1720
GlaI	GCGC	4 cut(s)	429, 462, 1593, 1720
GsaI	CCCAGC	3 cut(s)	1515, 1932, 3074
GsuI	CTGGAG	3 cut(s)	1476, 2084, 2684
HaeII	RGCGCY	1 cut(s)	431
HaeIII	GGCC	6 cut(s)	111, 866, 1523, 2271, 2407, 2438
HapII	CCGG	6 cut(s)	132, 304, 425, 437, 867, 2895
HgaI	GACGC	4 cut(s)	430, 442, 2192, 2738
HhaI	GCGC	4 cut(s)	430, 463, 1594, 1721
Hin1I	GRCGYC	3 cut(s)	422, 428, 434
Hin6I	GCGC	4 cut(s)	428, 461, 1592, 1719
HinP1I	GCGC	4 cut(s)	428, 461, 1592, 1719
HincII	GTYRAC	2 cut(s)	346, 946
HindII	GTYRAC	2 cut(s)	346, 946
HindIII	AAGCTT	2 cut(s)	1224, 3017
HpaI	GTTAAC	2 cut(s)	346, 946
HpaII	CCGG	6 cut(s)	132, 304, 425, 437, 867, 2895
HphI	GGTGA	6 cut(s)	170, 247, 725, 1847, 2393, 2645
Hpy188III	TCNNGA	9 cut(s)	218, 1282, 1304, 1343, 1617, 2542, 2586, 2595, 2770
Hpy99I	CGWCG	4 cut(s)	254, 278, 436, 1700
HpyCH4III	ACNGT	7 cut(s)	350, 558, 1288, 1696, 2005, 2116, 2776
HpyCH4IV	ACGT	1 cut(s)	1470
HpyF3I	CTNAG	8 cut(s)	588, 650, 1557, 1794, 1907, 2361, 2789, 2871
HpySE526I	ACGT	1 cut(s)	1470
Hsp92I	GRCGYC	3 cut(s)	422, 428, 434
HspAI	GCGC	4 cut(s)	428, 461, 1592, 1719
KasI	GGCGCC	1 cut(s)	427
KroI	GCCGGC	2 cut(s)	131, 424
KroNI	GCCGGC	2 cut(s)	133, 426
Ksp22I	TGATCA	1 cut(s)	1684
KspAI	GTTAAC	2 cut(s)	346, 946
KspI	CCGCGG	1 cut(s)	501
Kzo9I	GATC	8 cut(s)	80, 889, 1627, 1684, 1738, 2149, 2357, 2401
LguI	GCTCTTC	1 cut(s)	753
LweI	GCATC	6 cut(s)	1939, 2321, 2438, 2501, 2521, 2543
MaeI	CTAG	6 cut(s)	236, 930, 1875, 1946, 1977, 2261
MaeII	ACGT	1 cut(s)	1470
MaeIII	GTNAC	7 cut(s)	176, 253, 1865, 2141, 2817, 2940, 3063
MalI	GATC	8 cut(s)	82, 891, 1629, 1686, 1740, 2151, 2359, 2403
MbiI	CCGCTC	4 cut(s)	127, 144, 183, 399
MboI	GATC	8 cut(s)	80, 889, 1627, 1684, 1738, 2149, 2357, 2401
MflI	RGATCY	1 cut(s)	2357
MhlI	GDGCHC	7 cut(s)	1489, 1705, 1747, 1790, 1915, 2070, 2377
MlsI	TGGCCA	2 cut(s)	1523, 2271
MluNI	TGGCCA	2 cut(s)	1523, 2271
Mly113I	GGCGCC	1 cut(s)	428
MlyI	GAGTC	3 cut(s)	476, 911, 1109
MmeI	TCCRAC	3 cut(s)	1137, 1280, 1978
Mox20I	TGGCCA	2 cut(s)	1523, 2271
Mph1103I	ATGCAT	3 cut(s)	2336, 2536, 2751
MreI	CGCCGGCG	2 cut(s)	131, 424
MroNI	GCCGGC	2 cut(s)	131, 424
MroXI	GAANNNNTTC	4 cut(s)	513, 762, 1227, 1245
MscI	TGGCCA	2 cut(s)	1523, 2271
MslI	CAYNNNNRTG	3 cut(s)	1029, 1479, 2231
Msp20I	TGGCCA	2 cut(s)	1523, 2271
MspA1I	CMGCKG	4 cut(s)	500, 541, 3070, 3097
MspCI	CTTAAG	1 cut(s)	1094
MspI	CCGG	6 cut(s)	132, 304, 425, 437, 867, 2895
MspR9I	CCNGG	2 cut(s)	304, 3042
Mva1269I	GAATGC	2 cut(s)	226, 2651
MvaI	CCWGG	1 cut(s)	3042
MvnI	CGCG	2 cut(s)	14, 500
NaeI	GCCGGC	2 cut(s)	133, 426
NarI	GGCGCC	1 cut(s)	428
NciI	CCSGG	1 cut(s)	304
NdeI	CATATG	1 cut(s)	1480
NdeII	GATC	8 cut(s)	80, 889, 1627, 1684, 1738, 2149, 2357, 2401
NgoMIV	GCCGGC	2 cut(s)	131, 424
NlaIV	GGNNCC	8 cut(s)	429, 639, 865, 1078, 1789, 1890, 2029, 3055
NmeAIII	GCCGAG	1 cut(s)	81
NmuCI	GTSAC	4 cut(s)	176, 253, 1865, 2141
NsbI	TGCGCA	1 cut(s)	1720
NsiI	ATGCAT	3 cut(s)	2336, 2536, 2751
NspI	RCATGY	7 cut(s)	772, 1398, 1608, 1719, 1937, 2347, 2373
NspV	TTCGAA	2 cut(s)	489, 3106
PaeI	GCATGC	2 cut(s)	1719, 1937
PagI	TCATGA	1 cut(s)	1281
PciI	ACATGT	1 cut(s)	768
PciSI	GCTCTTC	1 cut(s)	753
PcsI	WCGNNNNNNNCGW	2 cut(s)	246, 428
PctI	GAATGC	2 cut(s)	226, 2651
PdiI	GCCGGC	2 cut(s)	133, 426
PdmI	GAANNNNTTC	4 cut(s)	513, 762, 1227, 1245
PflMI	CCANNNNNTGG	1 cut(s)	1444
Ple19I	CGATCG	1 cut(s)	83
PleI	GAGTC	3 cut(s)	475, 910, 1109
PluTI	GGCGCC	1 cut(s)	431
PpsI	GAGTC	3 cut(s)	475, 910, 1109
PscI	ACATGT	1 cut(s)	768
PshAI	GACNNNNGTC	1 cut(s)	174
PsiI	TTATAA	1 cut(s)	936
Psp124BI	GAGCTC	1 cut(s)	2070
Psp1406I	AACGTT	1 cut(s)	1470
Psp6I	CCWGG	1 cut(s)	3040
PspEI	GGTNACC	2 cut(s)	176, 2940
PspFI	CCCAGC	3 cut(s)	1511, 1928, 3070
PspGI	CCWGG	1 cut(s)	3040
PspN4I	GGNNCC	8 cut(s)	429, 639, 865, 1078, 1789, 1890, 2029, 3055
PspPI	GGNCC	3 cut(s)	864, 1765, 1888
PstI	CTGCAG	2 cut(s)	529, 546
PsuI	RGATCY	1 cut(s)	2357
PvuI	CGATCG	1 cut(s)	83
PvuII	CAGCTG	2 cut(s)	541, 3070
RsaI	GTAC	3 cut(s)	1267, 1418, 2087
RsaNI	GTAC	3 cut(s)	1266, 1417, 2086
RseI	CAYNNNNRTG	3 cut(s)	1029, 1479, 2231
SacI	GAGCTC	1 cut(s)	2070
SacII	CCGCGG	1 cut(s)	501
SapI	GCTCTTC	1 cut(s)	753
Sau3AI	GATC	8 cut(s)	80, 889, 1627, 1684, 1738, 2149, 2357, 2401
Sau96I	GGNCC	3 cut(s)	864, 1765, 1888
SchI	GAGTC	3 cut(s)	476, 911, 1109
ScrFI	CCNGG	2 cut(s)	304, 3042
SduI	GDGCHC	7 cut(s)	1489, 1705, 1747, 1790, 1915, 2070, 2377
SfaNI	GCATC	6 cut(s)	1939, 2321, 2438, 2501, 2521, 2543
SfcI	CTRYAG	7 cut(s)	525, 542, 897, 1674, 2032, 2156, 2844
SfoI	GGCGCC	1 cut(s)	429
Sfr303I	CCGCGG	1 cut(s)	501
SfuI	TTCGAA	2 cut(s)	489, 3106
SgrAI	CRCCGGYG	3 cut(s)	131, 424, 436
SgrBI	CCGCGG	1 cut(s)	501
SinI	GGWCC	2 cut(s)	1765, 1888
SmiMI	CAYNNNNRTG	3 cut(s)	1029, 1479, 2231
SmlI	CTYRAG	6 cut(s)	21, 1094, 1302, 2081, 2286, 2409
SmoI	CTYRAG	6 cut(s)	21, 1094, 1302, 2081, 2286, 2409
SpeI	ACTAGT	1 cut(s)	1874
SphI	GCATGC	2 cut(s)	1719, 1937
SspDI	GGCGCC	1 cut(s)	427
SspMI	CTAG	6 cut(s)	236, 930, 1875, 1946, 1977, 2261
SstI	GAGCTC	1 cut(s)	2070
StyD4I	CCNGG	2 cut(s)	302, 3040
StyI	CCWWGG	3 cut(s)	1524, 2950, 3123
TaaI	ACNGT	7 cut(s)	350, 558, 1288, 1696, 2005, 2116, 2776
TaiI	ACGT	1 cut(s)	1473
TaqI	TCGA	6 cut(s)	83, 194, 489, 1205, 2797, 3106
TaqII	GACCGA	1 cut(s)	1590
TatI	WGTACW	3 cut(s)	1265, 1416, 2085
TauI	GCSGC	2 cut(s)	111, 402
TscAI	CASTG	8 cut(s)	709, 756, 979, 1494, 1915, 2067, 2137, 3037
TseFI	GTSAC	4 cut(s)	176, 253, 1865, 2141
Tsp45I	GTSAC	4 cut(s)	176, 253, 1865, 2141
TspGWI	ACGGA	4 cut(s)	186, 262, 283, 2368
TspRI	CASTG	8 cut(s)	709, 756, 979, 1494, 1915, 2067, 2137, 3037
Van91I	CCANNNNNTGG	1 cut(s)	1444
Vha464I	CTTAAG	1 cut(s)	1094
VneI	GTGCAC	2 cut(s)	1911, 2373
VpaK11BI	GGWCC	2 cut(s)	1765, 1888
XapI	RAATTY	3 cut(s)	310, 1844, 3047
XceI	RCATGY	7 cut(s)	772, 1398, 1608, 1719, 1937, 2347, 2373
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2233
XmiI	GTMKAC	3 cut(s)	279, 2448, 2867
XmnI	GAANNNNTTC	4 cut(s)	513, 762, 1227, 1245
XspI	CTAG	6 cut(s)	236, 930, 1875, 1946, 1977, 2261
Zsp2I	ATGCAT	3 cut(s)	2336, 2536, 2751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.