Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0010114

Physical Location & Seq

Genomic Coordinates Forward (+)

18410128 .. 18412562

Gene Structure 2435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G187000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1110 bp

ATGGAGTCTCTTTCCATGATCCTCTCCTGCTCTCCACCACTGCAAAACCACCTCAAAACCCAGAAACCAGTCACCTCAGGGCCAATCTCTCTTCCCCAAAACTCCACCTCTATCTCCATTGTTGCTTCTCAACCATTCAATTCTTTTCCCTCCACCAAAAACAACCTTCAGTCTCAATCCTCAAAATCTGTCCAAAACCCATCTTTGATTCTCAAAACCTCTCCTTTTTCACAAGGCTTAACAAGAAACCGGCTTTATTTTCTTCTCACCGAGCTCATTACAACTACTGCATTCACTCTTCCTGGTTTTGCTTCTGAAGCTGCAGTCTCCTCGACTGAGCAAGTTTCTGACAGAATAAACTTGGAAGCAATCTTAGTCTCCATTGATGACTTTTTCAATCGAAACCCTTTTTTTGTTGCTGGCTGTACATTCGTTTGGCTGGTTGTTATACCTCTGGTTCAAGAGTATTTGAGAAAATATAAGTTTGTTCTCGTCATTGATGCATTTCGGAAACTCCGAGACGACCCAAATGTTCAGCTTTTGGATATTAGGGATGAGAAGAGTTTGAAGTATCTGAAGTCTCCAAATTTGAAGATTCTGAATAAGGCTACGGTGCAGGTTCCGTTTTCTGAGGATGATGAAGATGGGTTTGTGAAAAAGGTTTTGGAGAGGTTTGGGAACCCAGCAGACACTGCCCTCTGTGTTCTGGGCAATTTTGATGGAATTTCCATCAAAGTGGCTGAGTTACTGTTCAAGAATGGTTTCAAAGAGGCTTATGCAATCAAGGGTGGGGTTGGAGGCACAAAAGGGTGGTTGGAATCACAAGAAACTCTTTTGCCACCATCTATGCATATCTACCCCAAGAAGAAGGTTGAAACTTCACAAAAAACTGGGATGAATGGAGGAGTTGTTCGGGGCAATGAAGACAGTAATGGTGCTGCCTCTGCTGGAAGTTTTTCCATAGGAGAAAGTCAAAGGACGGACAATGGACGCACGGCGAAGTCTACAGACTCCGTGTCACATGTGAAAAATGGTTTTAGATCATCCTCTCCCTACCCAAGTTACCCAGATTTGAAGCCACCATCTTCCCCAACTCCATCGAAGCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004568 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006022 GO:0006026 GO:0006030 GO:0006032 GO:0006040 GO:0006807 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016787 GO:0016798 GO:0017144 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0042737 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046348 GO:0055035 GO:0071704 GO:0097367 GO:1901071 GO:1901072 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

370

Amino Acids

40.35

Weight (kDa)

9.13

Isoelectric Point (pI)

47.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25480
fragaria_vesca	FvH4_2g17470
malus_domestica	MD05G1153600.v1.1 MD10G1147900.v1.1
prunus_persica	Prupe.8G187000_v2.0.a1
pyrus_communis	pycom05g14800 pycom10g12800
rosa_chinensis	RchiOBHm_Chr3g0456441 RchiOBHm_Chr6g0282201 RchiOBHm_Chr6g0284601
rosa_laevigata	RLG00000012902 RLG00000025305
rosa_multiflora	Rmu_sc0011940.1_g000009 Rmu_sc0014549.1_g000007
rosa_rugosa	Rorug06G0146100
rosa_samantha	Rh6AG259300 Rh6BG262600 Rh6CG261500 Rh6DG253600
rosa_wichuraiana	Rw3G006290 Rw6G022430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	607
AccI	GTMKAC	1 cut(s)	1004
AclWI	GGATC	1 cut(s)	13
AcsI	RAATTY	2 cut(s)	586, 723
AcuI	CTGAAG	3 cut(s)	152, 336, 596
AfaI	GTAC	1 cut(s)	427
AflIII	ACRYGT	1 cut(s)	1021
AgsI	TTSAA	9 cut(s)	139, 397, 461, 568, 592, 754, 766, 875, 1075
AhdI	GACNNNNNGTC	1 cut(s)	1015
AjnI	CCWGG	1 cut(s)	301
AjuI	GAANNNNNNNTTGG	2 cut(s)	647, 679
AloI	GAACNNNNNNTCC	2 cut(s)	894, 926
AluBI	AGCT	3 cut(s)	274, 320, 538
AluI	AGCT	3 cut(s)	274, 320, 538
Alw21I	GWGCWC	1 cut(s)	276
Alw26I	GTCTC	6 cut(s)	12, 177, 331, 382, 513, 585
AlwI	GGATC	1 cut(s)	13
AlwNI	CAGNNNCTG	1 cut(s)	692
AoxI	GGCC	1 cut(s)	80
ApeKI	GCWGC	2 cut(s)	320, 938
ApoI	RAATTY	2 cut(s)	586, 723
Asp700I	GAANNNNTTC	2 cut(s)	761, 955
AspS9I	GGNCC	1 cut(s)	80
AsuHPI	GGTGA	2 cut(s)	64, 259
AxyI	CCTNAGG	1 cut(s)	76
BanII	GRGCYC	1 cut(s)	276
BbsI	GAAGAC	1 cut(s)	930
Bbv12I	GWGCWC	1 cut(s)	276
BbvI	GCAGC	2 cut(s)	307, 925
BccI	CCATC	7 cut(s)	208, 638, 713, 737, 850, 1090, 1105
BceAI	ACGGC	1 cut(s)	1011
BcgI	CGANNNNNNTGC	2 cut(s)	312, 346
BciT130I	CCWGG	1 cut(s)	303
BcoDI	GTCTC	6 cut(s)	12, 177, 331, 382, 513, 585
BfmI	CTRYAG	2 cut(s)	321, 1005
BfuAI	ACCTGC	1 cut(s)	607
BisI	GCNGC	2 cut(s)	321, 939
BlsI	GCNGC	2 cut(s)	322, 940
Bme1390I	CCNGG	1 cut(s)	303
BmeRI	GACNNNNNGTC	1 cut(s)	1015
BmgT120I	GGNCC	1 cut(s)	80
BmiI	GGNNCC	2 cut(s)	621, 680
BmrFI	CCNGG	1 cut(s)	303
BmrI	ACTGGG	1 cut(s)	900
BmsI	GCATC	1 cut(s)	490
BmuI	ACTGGG	1 cut(s)	900
BpiI	GAAGAC	1 cut(s)	930
BsaXI	ACNNNNNCTCC	2 cut(s)	894, 924
Bse118I	RCCGGY	1 cut(s)	249
Bse1I	ACTGG	2 cut(s)	68, 895
Bse21I	CCTNAGG	1 cut(s)	76
Bse3DI	GCAATG	1 cut(s)	925
BseBI	CCWGG	1 cut(s)	303
BseGI	GGATG	4 cut(s)	559, 640, 900, 1043
BseMI	GCAATG	1 cut(s)	925
BseMII	CTCAG	4 cut(s)	90, 327, 621, 732
BseNI	ACTGG	2 cut(s)	68, 895
BseRI	GAGGAG	2 cut(s)	319, 918
BseXI	GCAGC	2 cut(s)	307, 925
BseYI	CCCAGC	1 cut(s)	682
BsgI	GTGCAG	1 cut(s)	635
BshFI	GGCC	1 cut(s)	82
BsiHKAI	GWGCWC	1 cut(s)	276
BsiSI	CCGG	1 cut(s)	250
BsmAI	GTCTC	6 cut(s)	12, 177, 331, 382, 513, 585
BsmBI	CGTCTC	1 cut(s)	513
BsmI	GAATGC	1 cut(s)	290
BsnI	GGCC	1 cut(s)	82
Bsp1286I	GDGCHC	1 cut(s)	276
Bsp1407I	TGTACA	1 cut(s)	425
Bsp143I	GATC	2 cut(s)	18, 1040
BspANI	GGCC	1 cut(s)	82
BspCNI	CTCAG	4 cut(s)	89, 328, 622, 733
BspLI	GGNNCC	2 cut(s)	621, 680
BspMAI	CTGCAG	1 cut(s)	325
BspMI	ACCTGC	1 cut(s)	607
BspPI	GGATC	1 cut(s)	13
BsrDI	GCAATG	1 cut(s)	925
BsrFI	RCCGGY	1 cut(s)	249
BsrGI	TGTACA	1 cut(s)	425
BsrI	ACTGG	2 cut(s)	68, 895
BssAI	RCCGGY	1 cut(s)	249
BssMI	GATC	2 cut(s)	18, 1040
Bst2UI	CCWGG	1 cut(s)	303
Bst4CI	ACNGT	3 cut(s)	613, 750, 929
Bst6I	CTCTTC	3 cut(s)	96, 303, 554
BstAPI	GCANNNNNTGC	1 cut(s)	692
BstAUI	TGTACA	1 cut(s)	425
BstC8I	GCNNGC	1 cut(s)	421
BstDEI	CTNAG	5 cut(s)	76, 336, 373, 630, 741
BstF5I	GGATG	4 cut(s)	559, 640, 900, 1043
BstKTI	GATC	2 cut(s)	21, 1043
BstMAI	GTCTC	6 cut(s)	12, 177, 331, 382, 513, 585
BstMBI	GATC	2 cut(s)	18, 1040
BstMWI	GCNNNNNNNGC	3 cut(s)	317, 692, 944
BstNI	CCWGG	1 cut(s)	303
BstNSI	RCATGY	1 cut(s)	1025
BstSCI	CCNGG	1 cut(s)	301
BstSFI	CTRYAG	2 cut(s)	321, 1005
BstV1I	GCAGC	2 cut(s)	307, 925
BstV2I	GAAGAC	1 cut(s)	930
BstXI	CCANNNNNNTGG	1 cut(s)	736
Bsu36I	CCTNAGG	1 cut(s)	76
BsuRI	GGCC	1 cut(s)	82
BtsCI	GGATG	4 cut(s)	559, 640, 900, 1043
BtsI	GCAGTG	2 cut(s)	38, 690
BtsIMutI	CAGTG	2 cut(s)	38, 690
BveI	ACCTGC	1 cut(s)	607
Cac8I	GCNNGC	1 cut(s)	421
CaiI	CAGNNNCTG	1 cut(s)	692
Cfr10I	RCCGGY	1 cut(s)	249
Cfr13I	GGNCC	1 cut(s)	80
CseI	GACGC	1 cut(s)	999
Csp6I	GTAC	1 cut(s)	426
CviAII	CATG	2 cut(s)	16, 1022
CviQI	GTAC	1 cut(s)	426
DdeI	CTNAG	5 cut(s)	76, 336, 373, 630, 741
DpnI	GATC	2 cut(s)	20, 1042
DpnII	GATC	2 cut(s)	18, 1040
DriI	GACNNNNNGTC	1 cut(s)	1015
Eam1104I	CTCTTC	3 cut(s)	96, 303, 554
Eam1105I	GACNNNNNGTC	1 cut(s)	1015
EarI	CTCTTC	3 cut(s)	96, 303, 554
Ecl136II	GAGCTC	1 cut(s)	274
Eco24I	GRGCYC	1 cut(s)	276
Eco53kI	GAGCTC	1 cut(s)	274
Eco57I	CTGAAG	3 cut(s)	152, 336, 596
Eco81I	CCTNAGG	1 cut(s)	76
EcoICRI	GAGCTC	1 cut(s)	274
EcoRII	CCWGG	1 cut(s)	301
EcoT22I	ATGCAT	2 cut(s)	505, 852
EcoT38I	GRGCYC	1 cut(s)	276
Esp3I	CGTCTC	1 cut(s)	513
FaeI	CATG	2 cut(s)	19, 1025
FaiI	YATR	8 cut(s)	17, 449, 480, 777, 848, 852, 962, 1023
FalI	AAGNNNNNCTT	2 cut(s)	816, 848
FatI	CATG	2 cut(s)	15, 1021
FblI	GTMKAC	1 cut(s)	1004
Fnu4HI	GCNGC	2 cut(s)	321, 939
FokI	GGATG	4 cut(s)	566, 647, 907, 1030
FriOI	GRGCYC	1 cut(s)	276
Fsp4HI	GCNGC	2 cut(s)	321, 939
GluI	GCNGC	2 cut(s)	321, 939
GsaI	CCCAGC	1 cut(s)	686
HaeIII	GGCC	1 cut(s)	82
HapII	CCGG	1 cut(s)	250
HgaI	GACGC	1 cut(s)	999
Hin1II	CATG	2 cut(s)	19, 1025
HinfI	GANTC	5 cut(s)	5, 208, 595, 818, 1010
HpaII	CCGG	1 cut(s)	250
HphI	GGTGA	2 cut(s)	64, 259
Hpy166II	GTNNAC	1 cut(s)	1005
Hpy188I	TCNGA	7 cut(s)	316, 349, 510, 518, 576, 600, 631
Hpy188III	TCNNGA	2 cut(s)	461, 754
Hpy8I	GTNNAC	1 cut(s)	1005
HpyAV	CCTTC	2 cut(s)	176, 862
HpyCH4III	ACNGT	3 cut(s)	613, 750, 929
HpyCH4V	TGCA	7 cut(s)	43, 290, 323, 503, 616, 779, 850
HpyF10VI	GCNNNNNNNGC	3 cut(s)	317, 692, 944
HpyF3I	CTNAG	5 cut(s)	76, 336, 373, 630, 741
Hsp92II	CATG	2 cut(s)	19, 1025
Kzo9I	GATC	2 cut(s)	18, 1040
Lsp1109I	GCAGC	2 cut(s)	307, 925
LweI	GCATC	1 cut(s)	490
MaeIII	GTNAC	4 cut(s)	70, 744, 1017, 1061
MalI	GATC	2 cut(s)	20, 1042
MboI	GATC	2 cut(s)	18, 1040
MboII	GAAGA	9 cut(s)	83, 254, 290, 571, 604, 653, 877, 935, 1077
MhlI	GDGCHC	1 cut(s)	276
MluCI	AATT	4 cut(s)	139, 586, 712, 723
MlyI	GAGTC	2 cut(s)	14, 1004
MmeI	TCCRAC	2 cut(s)	775, 795
Mph1103I	ATGCAT	2 cut(s)	505, 852
MroXI	GAANNNNTTC	2 cut(s)	761, 955
MseI	TTAA	1 cut(s)	239
MslI	CAYNNNNRTG	1 cut(s)	734
MspI	CCGG	1 cut(s)	250
MspR9I	CCNGG	1 cut(s)	303
Mva1269I	GAATGC	1 cut(s)	290
MvaI	CCWGG	1 cut(s)	303
MwoI	GCNNNNNNNGC	3 cut(s)	317, 692, 944
NdeII	GATC	2 cut(s)	18, 1040
NlaIII	CATG	2 cut(s)	19, 1025
NlaIV	GGNNCC	2 cut(s)	621, 680
NmuCI	GTSAC	2 cut(s)	70, 1017
NsiI	ATGCAT	2 cut(s)	505, 852
NspI	RCATGY	1 cut(s)	1025
PciI	ACATGT	1 cut(s)	1021
PcsI	WCGNNNNNNNCGW	1 cut(s)	514
PctI	GAATGC	1 cut(s)	290
PdmI	GAANNNNTTC	2 cut(s)	761, 955
PfeI	GAWTC	3 cut(s)	208, 595, 818
PkrI	GCNGC	2 cut(s)	322, 940
PleI	GAGTC	2 cut(s)	13, 1004
PpsI	GAGTC	2 cut(s)	13, 1004
PscI	ACATGT	1 cut(s)	1021
Psp124BI	GAGCTC	1 cut(s)	276
Psp6I	CCWGG	1 cut(s)	301
PspFI	CCCAGC	1 cut(s)	682
PspGI	CCWGG	1 cut(s)	301
PspN4I	GGNNCC	2 cut(s)	621, 680
PspPI	GGNCC	1 cut(s)	80
PstI	CTGCAG	1 cut(s)	325
PstNI	CAGNNNCTG	1 cut(s)	692
RsaI	GTAC	1 cut(s)	427
RsaNI	GTAC	1 cut(s)	426
RseI	CAYNNNNRTG	1 cut(s)	734
SacI	GAGCTC	1 cut(s)	276
SaqAI	TTAA	1 cut(s)	239
SatI	GCNGC	2 cut(s)	321, 939
Sau3AI	GATC	2 cut(s)	18, 1040
Sau96I	GGNCC	1 cut(s)	80
SchI	GAGTC	2 cut(s)	14, 1004
ScrFI	CCNGG	1 cut(s)	303
SduI	GDGCHC	1 cut(s)	276
SfaNI	GCATC	1 cut(s)	490
SfcI	CTRYAG	2 cut(s)	321, 1005
SmiMI	CAYNNNNRTG	1 cut(s)	734
Sse9I	AATT	4 cut(s)	139, 586, 712, 723
SstI	GAGCTC	1 cut(s)	276
StyD4I	CCNGG	1 cut(s)	301
TaaI	ACNGT	3 cut(s)	613, 750, 929
TaqI	TCGA	3 cut(s)	332, 400, 1100
TasI	AATT	4 cut(s)	139, 586, 712, 723
TatI	WGTACW	1 cut(s)	425
TfiI	GAWTC	3 cut(s)	208, 595, 818
Tru1I	TTAA	1 cut(s)	239
Tru9I	TTAA	1 cut(s)	239
TscAI	CASTG	2 cut(s)	45, 697
TseFI	GTSAC	2 cut(s)	70, 1017
TseI	GCWGC	2 cut(s)	320, 938
Tsp45I	GTSAC	2 cut(s)	70, 1017
TspDTI	ATGAA	3 cut(s)	654, 911, 936
TspGWI	ACGGA	3 cut(s)	612, 995, 1003
TspRI	CASTG	2 cut(s)	45, 697
XapI	RAATTY	2 cut(s)	586, 723
XceI	RCATGY	1 cut(s)	1025
XmiI	GTMKAC	1 cut(s)	1004
XmnI	GAANNNNTTC	2 cut(s)	761, 955
Zsp2I	ATGCAT	2 cut(s)	505, 852

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.