Prupe.8G193700_v2.0.a1

domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0008764
Physical Location & Seq
Reverse (-)
18696754 .. 18698306
1553 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G193700.1

Sequence Viewer

Length: 660 bp
ATGAGTGGTCAGTTTGACGGCGCTGCCAACGCCAATTACAACAGCAGCAGCAGCAACAATCCTTATGTCCAATATTCCCCTGTTCCCACGACGAATTCTGCTACCAAGCGTCCGATGGATAATATGCTAGAGTCACTGAGCCAGTGCGGTAAAAGGGTTGAAGTTGCAACCAAAAGAGCAGAGGCCATTGCAGACAGTGTTTGGCACCACCTTAGAATGAGTCATAGTTTGACAGAAGCAGCCATGGCAAGGCTCAATCAAGGGACAAAGGTGCTTACAGGAGGAGGGAAAGAAAAAGTGTTCCAGCAAGAATTTGAGAACCTGGCAGGAGAGAAGCTCTTGCATTCATATGCTTGCTATCTGTCAACTTCTCATGGACCTGTAATTGGGATGCTCTACATCTCCAACAAAAGACTAGCCTTTTGCAGTGATTTCTGCCACTATTTGTCCCCAGGGAACCCAAATTTCATGCACTACAAGGTGGTGGTGCAGCTAGATCAATTAGGAACAGTCAATCCATCAGCAAACAGATGGAAGCCTTCAGAGAAATATATACACATTGTCACAAGGGATGGTTATGAATTCTGGTTCATGGGGTTCATATCCTATGACAAGGCCCTCAAGAATCTAAGCCAAGTTCTACAGATCTCTCAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAM

Protein Analysis

220

Amino Acids

24.54

Weight (kDa)

8.81

Isoelectric Point (pI)

51.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 204
AciI CCGC 1 cut(s) 147
AcsI RAATTY 4 cut(s) 94, 311, 463, 581
AcuI CTGAAG 1 cut(s) 525
AfiI CCNNNNNNNGG 2 cut(s) 249, 386
AgsI TTSAA 1 cut(s) 161
AjnI CCWGG 2 cut(s) 321, 451
AloI GAACNNNNNNTCC 2 cut(s) 499, 531
AluBI AGCT 2 cut(s) 337, 493
AluI AGCT 2 cut(s) 337, 493
AoxI GGCC 2 cut(s) 183, 615
ApeKI GCWGC 6 cut(s) 23, 45, 48, 51, 239, 490
ApoI RAATTY 4 cut(s) 94, 311, 463, 581
ArsI GACNNNNNNTTYG 2 cut(s) 405, 437
AspLEI GCGC 1 cut(s) 23
AspS9I GGNCC 2 cut(s) 377, 616
AvaII GGWCC 1 cut(s) 377
BanI GGYRCC 1 cut(s) 204
BbvI GCAGC 6 cut(s) 10, 57, 60, 63, 251, 502
BccI CCATC 4 cut(s) 109, 525, 526, 566
BceAI ACGGC 1 cut(s) 34
BciT130I CCWGG 2 cut(s) 323, 453
BfaI CTAG 3 cut(s) 128, 416, 494
BfmI CTRYAG 1 cut(s) 641
BfoI RGCGCY 1 cut(s) 24
BglII AGATCT 1 cut(s) 645
BisI GCNGC 6 cut(s) 24, 46, 49, 52, 240, 491
BlsI GCNGC 6 cut(s) 25, 47, 50, 53, 241, 492
Bme1390I CCNGG 2 cut(s) 323, 453
Bme18I GGWCC 1 cut(s) 377
BmgT120I GGNCC 2 cut(s) 377, 616
BmiI GGNNCC 2 cut(s) 206, 458
BmrFI CCNGG 2 cut(s) 323, 453
BmsI GCATC 1 cut(s) 381
BplI GAGNNNNNCTC 2 cut(s) 321, 353
BpuEI CTTGAG 1 cut(s) 605
BsaJI CCNNGG 3 cut(s) 243, 451, 452
Bsc4I CCNNNNNNNGG 2 cut(s) 249, 386
Bse1I ACTGG 1 cut(s) 142
Bse3DI GCAATG 1 cut(s) 186
BseBI CCWGG 2 cut(s) 323, 453
BseDI CCNNGG 3 cut(s) 243, 451, 452
BseGI GGATG 2 cut(s) 396, 577
BseLI CCNNNNNNNGG 2 cut(s) 249, 386
BseMI GCAATG 1 cut(s) 186
BseMII CTCAG 1 cut(s) 128
BseNI ACTGG 1 cut(s) 142
BseRI GAGGAG 1 cut(s) 297
BseXI GCAGC 6 cut(s) 10, 57, 60, 63, 251, 502
BsgI GTGCAG 1 cut(s) 509
BshFI GGCC 2 cut(s) 185, 617
BshNI GGYRCC 1 cut(s) 204
BslFI GGGAC 2 cut(s) 277, 433
BslI CCNNNNNNNGG 2 cut(s) 249, 386
BsmFI GGGAC 2 cut(s) 277, 433
BsmI GAATGC 1 cut(s) 343
BsnI GGCC 2 cut(s) 185, 617
Bsp143I GATC 2 cut(s) 496, 645
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 1 cut(s) 147
BspANI GGCC 2 cut(s) 185, 617
BspCNI CTCAG 1 cut(s) 129
BspLI GGNNCC 2 cut(s) 206, 458
BspT107I GGYRCC 1 cut(s) 204
BsrDI GCAATG 1 cut(s) 186
BsrI ACTGG 1 cut(s) 142
BssECI CCNNGG 3 cut(s) 243, 451, 452
BssMI GATC 2 cut(s) 496, 645
BssT1I CCWWGG 1 cut(s) 243
Bst2UI CCWGG 2 cut(s) 323, 453
Bst4CI ACNGT 2 cut(s) 197, 511
BstC8I GCNNGC 1 cut(s) 355
BstDEI CTNAG 4 cut(s) 137, 212, 629, 651
BstDSI CCRYGG 1 cut(s) 243
BstF5I GGATG 2 cut(s) 396, 577
BstH2I RGCGCY 1 cut(s) 24
BstHHI GCGC 1 cut(s) 23
BstKTI GATC 2 cut(s) 499, 648
BstMBI GATC 2 cut(s) 496, 645
BstMWI GCNNNNNNNGC 3 cut(s) 29, 51, 245
BstNI CCWGG 2 cut(s) 323, 453
BstSCI CCNGG 2 cut(s) 321, 451
BstSFI CTRYAG 1 cut(s) 641
BstV1I GCAGC 6 cut(s) 10, 57, 60, 63, 251, 502
BstX2I RGATCY 1 cut(s) 645
BstYI RGATCY 1 cut(s) 645
BsuRI GGCC 2 cut(s) 185, 617
BtgI CCRYGG 1 cut(s) 243
BtsCI GGATG 2 cut(s) 396, 577
BtsI GCAGTG 1 cut(s) 433
BtsIMutI CAGTG 4 cut(s) 134, 149, 202, 433
Cac8I GCNNGC 1 cut(s) 355
CfoI GCGC 1 cut(s) 23
Cfr13I GGNCC 2 cut(s) 377, 616
CseI GACGC 1 cut(s) 98
CviAII CATG 4 cut(s) 244, 374, 469, 592
DdeI CTNAG 4 cut(s) 137, 212, 629, 651
DpnI GATC 2 cut(s) 498, 647
DpnII GATC 2 cut(s) 496, 645
Eco130I CCWWGG 1 cut(s) 243
Eco47I GGWCC 1 cut(s) 377
Eco57I CTGAAG 1 cut(s) 525
EcoO109I RGGNCCY 1 cut(s) 616
EcoRI GAATTC 2 cut(s) 94, 581
EcoRII CCWGG 2 cut(s) 321, 451
EcoT14I CCWWGG 1 cut(s) 243
ErhI CCWWGG 1 cut(s) 243
FaeI CATG 4 cut(s) 247, 377, 472, 595
FaqI GGGAC 2 cut(s) 277, 433
FatI CATG 4 cut(s) 243, 373, 468, 591
FauNDI CATATG 1 cut(s) 349
Fnu4HI GCNGC 6 cut(s) 24, 46, 49, 52, 240, 491
FokI GGATG 2 cut(s) 403, 584
Fsp4HI GCNGC 6 cut(s) 24, 46, 49, 52, 240, 491
FspBI CTAG 3 cut(s) 128, 416, 494
GlaI GCGC 1 cut(s) 22
GluI GCNGC 6 cut(s) 24, 46, 49, 52, 240, 491
HaeII RGCGCY 1 cut(s) 24
HaeIII GGCC 2 cut(s) 185, 617
HgaI GACGC 1 cut(s) 98
HhaI GCGC 1 cut(s) 23
Hin1II CATG 4 cut(s) 247, 377, 472, 595
Hin6I GCGC 1 cut(s) 21
HinP1I GCGC 1 cut(s) 21
HincII GTYRAC 1 cut(s) 366
HindII GTYRAC 1 cut(s) 366
HinfI GANTC 3 cut(s) 131, 220, 625
Hpy166II GTNNAC 1 cut(s) 366
Hpy188I TCNGA 3 cut(s) 114, 544, 654
Hpy188III TCNNGA 1 cut(s) 622
Hpy8I GTNNAC 1 cut(s) 366
Hpy99I CGWCG 1 cut(s) 94
HpyAV CCTTC 1 cut(s) 549
HpyCH4III ACNGT 2 cut(s) 197, 511
HpyCH4V TGCA 6 cut(s) 167, 191, 343, 426, 472, 490
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 51, 245
HpyF3I CTNAG 4 cut(s) 137, 212, 629, 651
Hsp92II CATG 4 cut(s) 247, 377, 472, 595
HspAI GCGC 1 cut(s) 21
Kzo9I GATC 2 cut(s) 496, 645
Lsp1109I GCAGC 6 cut(s) 10, 57, 60, 63, 251, 502
LweI GCATC 1 cut(s) 381
MaeI CTAG 3 cut(s) 128, 416, 494
MaeIII GTNAC 2 cut(s) 132, 562
MalI GATC 2 cut(s) 498, 647
MboI GATC 2 cut(s) 496, 645
MflI RGATCY 1 cut(s) 645
MluCI AATT 8 cut(s) 34, 94, 311, 384, 463, 500, 581, 655
MlyI GAGTC 2 cut(s) 140, 229
MmeI TCCRAC 1 cut(s) 429
MnlI CCTC 4 cut(s) 175, 275, 278, 629
MslI CAYNNNNRTG 1 cut(s) 348
MspR9I CCNGG 2 cut(s) 323, 453
Mva1269I GAATGC 1 cut(s) 343
MvaI CCWGG 2 cut(s) 323, 453
MwoI GCNNNNNNNGC 3 cut(s) 29, 51, 245
NcoI CCATGG 1 cut(s) 243
NdeI CATATG 1 cut(s) 349
NdeII GATC 2 cut(s) 496, 645
NlaIII CATG 4 cut(s) 247, 377, 472, 595
NlaIV GGNNCC 2 cut(s) 206, 458
NmuCI GTSAC 2 cut(s) 132, 562
PasI CCCWGGG 1 cut(s) 452
PctI GAATGC 1 cut(s) 343
PfeI GAWTC 1 cut(s) 625
PkrI GCNGC 6 cut(s) 25, 47, 50, 53, 241, 492
PleI GAGTC 2 cut(s) 139, 228
PpsI GAGTC 2 cut(s) 139, 228
Psp6I CCWGG 2 cut(s) 321, 451
PspGI CCWGG 2 cut(s) 321, 451
PspN4I GGNNCC 2 cut(s) 206, 458
PspPI GGNCC 2 cut(s) 377, 616
PsuI RGATCY 1 cut(s) 645
RseI CAYNNNNRTG 1 cut(s) 348
SatI GCNGC 6 cut(s) 24, 46, 49, 52, 240, 491
Sau3AI GATC 2 cut(s) 496, 645
Sau96I GGNCC 2 cut(s) 377, 616
SchI GAGTC 2 cut(s) 140, 229
ScrFI CCNGG 2 cut(s) 323, 453
SetI ASST 7 cut(s) 213, 273, 324, 339, 382, 483, 495
SfaNI GCATC 1 cut(s) 381
SfcI CTRYAG 1 cut(s) 641
SinI GGWCC 1 cut(s) 377
SmiMI CAYNNNNRTG 1 cut(s) 348
SmlI CTYRAG 1 cut(s) 620
SmoI CTYRAG 1 cut(s) 620
Sse9I AATT 8 cut(s) 34, 94, 311, 384, 463, 500, 581, 655
SsiI CCGC 1 cut(s) 147
SspI AATATT 1 cut(s) 74
SspMI CTAG 3 cut(s) 128, 416, 494
StyD4I CCNGG 2 cut(s) 321, 451
StyI CCWWGG 1 cut(s) 243
TaaI ACNGT 2 cut(s) 197, 511
TasI AATT 8 cut(s) 34, 94, 311, 384, 463, 500, 581, 655
TfiI GAWTC 1 cut(s) 625
TscAI CASTG 4 cut(s) 141, 149, 202, 433
TseFI GTSAC 2 cut(s) 132, 562
TseI GCWGC 6 cut(s) 23, 45, 48, 51, 239, 490
Tsp45I GTSAC 2 cut(s) 132, 562
TspDTI ATGAA 5 cut(s) 336, 457, 580, 589, 594
TspRI CASTG 4 cut(s) 141, 149, 202, 433
VpaK11BI GGWCC 1 cut(s) 377
XapI RAATTY 4 cut(s) 94, 311, 463, 581
XcmI CCANNNNNNNNNTGG 1 cut(s) 112
XspI CTAG 3 cut(s) 128, 416, 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.