Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005884

Physical Location & Seq

Genomic Coordinates Reverse (-)

19140174 .. 19143371

Gene Structure 3198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G203700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGAAAAGTGAAGTTTGGAAGTGGGTTTTAGGTTTGATATATATATTTGCTGTTGCATCTATCTGGATAGCTGCCAGTTTTGTAGTACAGTCTGTTGTAGATGCCGGTGTGTCCCCATTTCTCATCACGTACATGTGCAATTCACTGTTTGTGATCTACATTCCCTTAGTTGAGATTGGAAGGTATTTGGAGGATTCGTGTGGCGGTTTGTGGTTTTGGAAAAGTAAGAAGAGTAGCCCCTTGCAAAGATTAGGAGAGTCAGAGCAAACCACTCTTCTTGAGGAGAGTGATGCAATTGTGAAAATGGATGCGGAAGATGGAGGAGTTAATTTTGGTACAGAAACAGAACCAAAAGTTGTATCATACGAGCTTGTTGGGACTTCAACAACTCGAGACAATGTCAACGAAACTGCTGATAAGCAAGTGGATGAAAAAGGGCGATGGACGCGAACTCGAGTGGCAAAAGTTAGCCTATTGATTTCCCCATTTTGGTTTCTTGCACAGCTCACTTTCAATTTGTCATTGAAGTATACTACAGTTACATCAAATACCATCTTAAGCAGTGCATCCAGCCTTTTCACCTTTTTGGTCTCTCTAGCATTCTTAGGTGAGAAATTTACTTTGGTGAAGTTTATTAGTGTTCTTCTTTGCATGGGAGGAACGATAATTGTCAGCCTTGGTGACTCGCAAACTGCTTTAAGTACAATTGCTTCTAACCCTCTACTCGGAGACATACTTGCTCTTGTCTCGGCAGCCTTGTATTCTGTGTATGTTACCCTAATTCGCAAGAAGTTACCGGATGAAGATGATGAAAAAAGTGGCCGTGCCAGTATGGCCCAGTTTCTGGGCTTTCTAGGGCTTTGCAACATTCTTATATTTCTCCCAGTTGCCCTTATACTTCATTTCTCAAAGTTGGAGCCCTTTTATATGCTAACCTGGGAGCAGGTTGGTCTCATTGTTGGCAAAGGTTTGTTGGATAATGTTCTGAGTGATTATCTATGGGCCAAAGCTGTTCTTCTAACAACGACCACAGTAGCAACAGCCGGTCTAACAATACAGGTTCCGTTGGCGGCAATTGTGGACTCAATGACTGGCCATGCTCCTCATCTTGCTGATTACCTTGGTGCTGTGGCTGTCATGATTGGATTCGCGGGCATAAACATTCCCACTGATGCTTTTAACAAATCAAATGAATCTATGCATGTACTAGAGAAGGAAAATATTGGTCTGACCGATGAAGCTCACAATTCATCAGGCACGCCAGATTCAGCTGCCCCCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

428

Amino Acids

46.37

Weight (kDa)

4.89

Isoelectric Point (pI)

36.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005884)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07080
fragaria_vesca	FvH4_2g19180 FvH4_2g19180 FvH4_2g19180 FvH4_2g19180 FvH4_2g19180
malus_domestica	MD04G1105300.v1.1 MD05G1176400.v1.1 MD05G1176600.v1.1 MD10G1165300.v1.1
prunus_persica	Prupe.8G203700_v2.0.a1 Prupe.8G203700_v2.0.a1 Prupe.8G203700_v2.0.a1
pyrus_communis	pycom05g16280 pycom10g14260
rosa_chinensis	RchiOBHm_Chr6g0284971
rosa_laevigata	RLG00000012694
rosa_multiflora	Rmu_sc0004961.1_g000021 Rmu_sc0006185.1_g000007
rosa_roxburghii	Rroxscaffold_7G00183880 Rroxscaffold_7G00184160
rosa_rugosa	Rorug06G0169400 Rorug06G0169500
rosa_samantha	Rh6AG281100 Rh6BG281800 Rh6CG283500 Rh6DG276600
rosa_wichuraiana	Rw6G024160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	934
AccB7I	CCANNNNNTGG	1 cut(s)	844
AccI	GTMKAC	1 cut(s)	530
AccII	CGCG	2 cut(s)	448, 1151
AciI	CCGC	4 cut(s)	204, 311, 1070, 1151
AcoI	YGGCCR	2 cut(s)	820, 1093
AcsI	RAATTY	1 cut(s)	614
AfaI	GTAC	5 cut(s)	87, 131, 337, 703, 1206
AfiI	CCNNNNNNNGG	3 cut(s)	489, 725, 844
AflII	CTTAAG	1 cut(s)	556
AflIII	ACRYGT	1 cut(s)	132
AgsI	TTSAA	3 cut(s)	384, 514, 526
AjnI	CCWGG	1 cut(s)	935
AjuI	GAANNNNNNNTTGG	2 cut(s)	605, 637
AluBI	AGCT	6 cut(s)	71, 370, 505, 1010, 1241, 1271
AluI	AGCT	6 cut(s)	71, 370, 505, 1010, 1241, 1271
Alw26I	GTCTC	5 cut(s)	387, 595, 723, 751, 956
AlwNI	CAGNNNCTG	1 cut(s)	844
Ama87I	CYCGRG	2 cut(s)	390, 453
AoxI	GGCC	4 cut(s)	820, 834, 1002, 1093
ApeKI	GCWGC	3 cut(s)	71, 752, 1271
ApoI	RAATTY	1 cut(s)	614
AspS9I	GGNCC	2 cut(s)	835, 1002
AsuHPI	GGTGA	4 cut(s)	571, 620, 637, 692
AvaI	CYCGRG	2 cut(s)	390, 453
BalI	TGGCCA	1 cut(s)	1095
BanII	GRGCYC	1 cut(s)	921
BarI	GAAGNNNNNNTAC	2 cut(s)	694, 726
BbvI	GCAGC	3 cut(s)	58, 764, 1258
BccI	CCATC	3 cut(s)	311, 435, 560
BceAI	ACGGC	1 cut(s)	807
BciT130I	CCWGG	1 cut(s)	937
BcoDI	GTCTC	5 cut(s)	387, 595, 723, 751, 956
BfaI	CTAG	3 cut(s)	596, 854, 1208
BfmI	CTRYAG	1 cut(s)	534
BfrI	CTTAAG	1 cut(s)	556
BfuAI	ACCTGC	1 cut(s)	934
BglI	GCCNNNNNGGC	1 cut(s)	833
BisI	GCNGC	4 cut(s)	72, 753, 1071, 1272
BlsI	GCNGC	4 cut(s)	73, 754, 1072, 1273
Bme1390I	CCNGG	1 cut(s)	937
BmeT110I	CYCGRG	2 cut(s)	390, 453
BmgT120I	GGNCC	2 cut(s)	835, 1002
BmiI	GGNNCC	2 cut(s)	918, 1062
BmrFI	CCNGG	1 cut(s)	937
BmrI	ACTGGG	2 cut(s)	832, 878
BmsI	GCATC	6 cut(s)	65, 91, 280, 298, 575, 1162
BmuI	ACTGGG	2 cut(s)	832, 878
BpuEI	CTTGAG	1 cut(s)	299
BsaAI	YACGTR	1 cut(s)	129
BsaI	GGTCTC	2 cut(s)	595, 956
BsaJI	CCNNGG	3 cut(s)	676, 936, 1120
BsaWI	WCCGGW	1 cut(s)	796
BsaXI	ACNNNNNCTCC	2 cut(s)	182, 212
Bsc4I	CCNNNNNNNGG	3 cut(s)	489, 725, 844
Bse118I	RCCGGY	2 cut(s)	104, 1043
Bse1I	ACTGG	5 cut(s)	75, 828, 838, 884, 1096
BseBI	CCWGG	1 cut(s)	937
BseDI	CCNNGG	3 cut(s)	676, 936, 1120
BseGI	GGATG	4 cut(s)	313, 433, 566, 805
BseLI	CCNNNNNNNGG	3 cut(s)	489, 725, 844
BseMII	CTCAG	1 cut(s)	977
BseNI	ACTGG	5 cut(s)	75, 828, 838, 884, 1096
BseRI	GAGGAG	3 cut(s)	296, 336, 1092
BseXI	GCAGC	3 cut(s)	58, 764, 1258
Bsh1236I	CGCG	2 cut(s)	448, 1151
BshFI	GGCC	4 cut(s)	822, 836, 1004, 1095
BsiHKCI	CYCGRG	2 cut(s)	390, 453
BsiSI	CCGG	3 cut(s)	105, 797, 1044
BslFI	GGGAC	2 cut(s)	97, 391
BslI	CCNNNNNNNGG	3 cut(s)	489, 725, 844
BsmAI	GTCTC	5 cut(s)	387, 595, 723, 751, 956
BsmFI	GGGAC	2 cut(s)	97, 391
BsmI	GAATGC	1 cut(s)	599
BsnI	GGCC	4 cut(s)	822, 836, 1004, 1095
Bso31I	GGTCTC	2 cut(s)	595, 956
BsoBI	CYCGRG	2 cut(s)	390, 453
Bsp1286I	GDGCHC	1 cut(s)	921
Bsp143I	GATC	1 cut(s)	153
BspACI	CCGC	4 cut(s)	204, 311, 1070, 1151
BspANI	GGCC	4 cut(s)	822, 836, 1004, 1095
BspCNI	CTCAG	1 cut(s)	978
BspFNI	CGCG	2 cut(s)	448, 1151
BspHI	TCATGA	1 cut(s)	1137
BspLI	GGNNCC	2 cut(s)	918, 1062
BspMI	ACCTGC	1 cut(s)	934
BspTI	CTTAAG	1 cut(s)	556
BspTNI	GGTCTC	2 cut(s)	595, 956
BsrFI	RCCGGY	2 cut(s)	104, 1043
BsrI	ACTGG	5 cut(s)	75, 828, 838, 884, 1096
BssAI	RCCGGY	2 cut(s)	104, 1043
BssECI	CCNNGG	3 cut(s)	676, 936, 1120
BssMI	GATC	1 cut(s)	153
BssNAI	GTATAC	1 cut(s)	531
BssT1I	CCWWGG	2 cut(s)	676, 1120
Bst1107I	GTATAC	1 cut(s)	531
Bst2UI	CCWGG	1 cut(s)	937
Bst4CI	ACNGT	4 cut(s)	90, 147, 538, 1033
Bst6I	CTCTTC	2 cut(s)	224, 279
BstAFI	CTTAAG	1 cut(s)	556
BstBAI	YACGTR	1 cut(s)	129
BstC8I	GCNNGC	2 cut(s)	1153, 1259
BstDEI	CTNAG	3 cut(s)	166, 604, 986
BstF5I	GGATG	4 cut(s)	313, 433, 566, 805
BstFNI	CGCG	2 cut(s)	448, 1151
BstKTI	GATC	1 cut(s)	156
BstMAI	GTCTC	5 cut(s)	387, 595, 723, 751, 956
BstMBI	GATC	1 cut(s)	153
BstMWI	GCNNNNNNNGC	2 cut(s)	445, 833
BstNI	CCWGG	1 cut(s)	937
BstNSI	RCATGY	2 cut(s)	136, 1205
BstSCI	CCNGG	1 cut(s)	935
BstSFI	CTRYAG	1 cut(s)	534
BstUI	CGCG	2 cut(s)	448, 1151
BstV1I	GCAGC	3 cut(s)	58, 764, 1258
BstZ17I	GTATAC	1 cut(s)	531
BsuRI	GGCC	4 cut(s)	822, 836, 1004, 1095
BtgZI	GCGATG	1 cut(s)	454
BtsCI	GGATG	4 cut(s)	313, 433, 566, 805
BtsI	GCAGTG	1 cut(s)	568
BtsIMutI	CAGTG	3 cut(s)	143, 568, 1167
BveI	ACCTGC	1 cut(s)	934
Cac8I	GCNNGC	2 cut(s)	1153, 1259
CaiI	CAGNNNCTG	1 cut(s)	844
CciI	TCATGA	1 cut(s)	1137
Cfr10I	RCCGGY	2 cut(s)	104, 1043
Cfr13I	GGNCC	2 cut(s)	835, 1002
CseI	GACGC	1 cut(s)	454
Csp6I	GTAC	5 cut(s)	86, 130, 336, 702, 1205
CspCI	CAANNNNNGTGG	2 cut(s)	259, 294
CviAII	CATG	5 cut(s)	133, 652, 1097, 1138, 1202
CviQI	GTAC	5 cut(s)	86, 130, 336, 702, 1205
DdeI	CTNAG	3 cut(s)	166, 604, 986
DpnI	GATC	1 cut(s)	155
DpnII	GATC	1 cut(s)	153
EaeI	YGGCCR	2 cut(s)	820, 1093
Eam1104I	CTCTTC	2 cut(s)	224, 279
EarI	CTCTTC	2 cut(s)	224, 279
Eco130I	CCWWGG	2 cut(s)	676, 1120
Eco24I	GRGCYC	1 cut(s)	921
Eco31I	GGTCTC	2 cut(s)	595, 956
Eco88I	CYCGRG	2 cut(s)	390, 453
EcoRII	CCWGG	1 cut(s)	935
EcoT14I	CCWWGG	2 cut(s)	676, 1120
EcoT22I	ATGCAT	1 cut(s)	1203
EcoT38I	GRGCYC	1 cut(s)	921
ErhI	CCWWGG	2 cut(s)	676, 1120
FaeI	CATG	5 cut(s)	136, 655, 1100, 1141, 1205
FalI	AAGNNNNNCTT	2 cut(s)	999, 1031
FaqI	GGGAC	2 cut(s)	97, 391
FatI	CATG	5 cut(s)	132, 651, 1096, 1137, 1201
FauI	CCCGC	1 cut(s)	1144
FblI	GTMKAC	1 cut(s)	530
Fnu4HI	GCNGC	4 cut(s)	72, 753, 1071, 1272
FokI	GGATG	4 cut(s)	320, 440, 553, 812
FriOI	GRGCYC	1 cut(s)	921
Fsp4HI	GCNGC	4 cut(s)	72, 753, 1071, 1272
FspBI	CTAG	3 cut(s)	596, 854, 1208
GluI	GCNGC	4 cut(s)	72, 753, 1071, 1272
HaeIII	GGCC	4 cut(s)	822, 836, 1004, 1095
HapII	CCGG	3 cut(s)	105, 797, 1044
HgaI	GACGC	1 cut(s)	454
Hin1II	CATG	5 cut(s)	136, 655, 1100, 1141, 1205
HincII	GTYRAC	1 cut(s)	403
HindII	GTYRAC	1 cut(s)	403
HinfI	GANTC	7 cut(s)	194, 257, 683, 1082, 1146, 1193, 1265
HpaII	CCGG	3 cut(s)	105, 797, 1044
HphI	GGTGA	4 cut(s)	571, 620, 637, 692
Hpy166II	GTNNAC	3 cut(s)	403, 531, 1081
Hpy188I	TCNGA	4 cut(s)	262, 728, 987, 1230
Hpy188III	TCNNGA	4 cut(s)	64, 278, 392, 1138
Hpy8I	GTNNAC	3 cut(s)	403, 531, 1081
HpyAV	CCTTC	2 cut(s)	174, 1207
HpyCH4III	ACNGT	4 cut(s)	90, 147, 538, 1033
HpyCH4IV	ACGT	1 cut(s)	128
HpyCH4V	TGCA	9 cut(s)	56, 138, 244, 293, 500, 566, 651, 864, 1201
HpyF10VI	GCNNNNNNNGC	2 cut(s)	445, 833
HpyF3I	CTNAG	3 cut(s)	166, 604, 986
HpySE526I	ACGT	1 cut(s)	128
Hsp92II	CATG	5 cut(s)	136, 655, 1100, 1141, 1205
Kzo9I	GATC	1 cut(s)	153
LmnI	GCTCC	3 cut(s)	916, 940, 1105
Lsp1109I	GCAGC	3 cut(s)	58, 764, 1258
LweI	GCATC	6 cut(s)	65, 91, 280, 298, 575, 1162
MaeI	CTAG	3 cut(s)	596, 854, 1208
MaeII	ACGT	1 cut(s)	128
MaeIII	GTNAC	4 cut(s)	538, 680, 772, 792
MalI	GATC	1 cut(s)	155
MboI	GATC	1 cut(s)	153
MboII	GAAGA	6 cut(s)	241, 266, 326, 635, 815, 1007
MfeI	CAATTG	3 cut(s)	294, 705, 1074
MhlI	GDGCHC	1 cut(s)	921
MlsI	TGGCCA	1 cut(s)	1095
MluNI	TGGCCA	1 cut(s)	1095
MlyI	GAGTC	3 cut(s)	266, 677, 1076
MmeI	TCCRAC	2 cut(s)	894, 954
MnlI	CCTC	6 cut(s)	184, 274, 314, 650, 729, 1113
Mox20I	TGGCCA	1 cut(s)	1095
Mph1103I	ATGCAT	1 cut(s)	1203
MscI	TGGCCA	1 cut(s)	1095
MseI	TTAA	4 cut(s)	327, 557, 698, 1179
MslI	CAYNNNNRTG	1 cut(s)	131
Msp20I	TGGCCA	1 cut(s)	1095
MspA1I	CMGCKG	1 cut(s)	1271
MspCI	CTTAAG	1 cut(s)	556
MspI	CCGG	3 cut(s)	105, 797, 1044
MspR9I	CCNGG	1 cut(s)	937
MunI	CAATTG	3 cut(s)	294, 705, 1074
Mva1269I	GAATGC	1 cut(s)	599
MvaI	CCWGG	1 cut(s)	937
MvnI	CGCG	2 cut(s)	448, 1151
MwoI	GCNNNNNNNGC	2 cut(s)	445, 833
NdeII	GATC	1 cut(s)	153
NlaIII	CATG	5 cut(s)	136, 655, 1100, 1141, 1205
NlaIV	GGNNCC	2 cut(s)	918, 1062
NmeAIII	GCCGAG	1 cut(s)	728
NmuCI	GTSAC	1 cut(s)	680
NsiI	ATGCAT	1 cut(s)	1203
NspI	RCATGY	2 cut(s)	136, 1205
PaeR7I	CTCGAG	2 cut(s)	390, 453
PagI	TCATGA	1 cut(s)	1137
PciI	ACATGT	1 cut(s)	132
PctI	GAATGC	1 cut(s)	599
PfeI	GAWTC	4 cut(s)	194, 1146, 1193, 1265
PflFI	GACNNNGTC	1 cut(s)	398
PflMI	CCANNNNNTGG	1 cut(s)	844
PkrI	GCNGC	4 cut(s)	73, 754, 1072, 1273
PleI	GAGTC	3 cut(s)	265, 677, 1076
PpsI	GAGTC	3 cut(s)	265, 677, 1076
Ppu21I	YACGTR	1 cut(s)	129
PscI	ACATGT	1 cut(s)	132
Psp6I	CCWGG	1 cut(s)	935
PspGI	CCWGG	1 cut(s)	935
PspN4I	GGNNCC	2 cut(s)	918, 1062
PspPI	GGNCC	2 cut(s)	835, 1002
PspXI	VCTCGAGB	1 cut(s)	453
PstNI	CAGNNNCTG	1 cut(s)	844
PsyI	GACNNNGTC	1 cut(s)	398
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	5 cut(s)	87, 131, 337, 703, 1206
RsaNI	GTAC	5 cut(s)	86, 130, 336, 702, 1205
RseI	CAYNNNNRTG	1 cut(s)	131
SaqAI	TTAA	4 cut(s)	327, 557, 698, 1179
SatI	GCNGC	4 cut(s)	72, 753, 1071, 1272
Sau3AI	GATC	1 cut(s)	153
Sau96I	GGNCC	2 cut(s)	835, 1002
SchI	GAGTC	3 cut(s)	266, 677, 1076
ScrFI	CCNGG	1 cut(s)	937
SduI	GDGCHC	1 cut(s)	921
SfaNI	GCATC	6 cut(s)	65, 91, 280, 298, 575, 1162
SfcI	CTRYAG	1 cut(s)	534
Sfr274I	CTCGAG	2 cut(s)	390, 453
SlaI	CTCGAG	2 cut(s)	390, 453
SmiMI	CAYNNNNRTG	1 cut(s)	131
SmlI	CTYRAG	4 cut(s)	278, 390, 453, 556
SmoI	CTYRAG	4 cut(s)	278, 390, 453, 556
SsiI	CCGC	4 cut(s)	204, 311, 1070, 1151
SspI	AATATT	1 cut(s)	1222
SspMI	CTAG	3 cut(s)	596, 854, 1208
StyD4I	CCNGG	1 cut(s)	935
StyI	CCWWGG	2 cut(s)	676, 1120
TaaI	ACNGT	4 cut(s)	90, 147, 538, 1033
TaiI	ACGT	1 cut(s)	131
TaqI	TCGA	2 cut(s)	391, 454
TaqII	GACCGA	1 cut(s)	1247
TatI	WGTACW	3 cut(s)	85, 701, 1204
TauI	GCSGC	1 cut(s)	1073
TfiI	GAWTC	4 cut(s)	194, 1146, 1193, 1265
Tru1I	TTAA	4 cut(s)	327, 557, 698, 1179
Tru9I	TTAA	4 cut(s)	327, 557, 698, 1179
TscAI	CASTG	3 cut(s)	150, 568, 1174
TseFI	GTSAC	1 cut(s)	680
TseI	GCWGC	3 cut(s)	71, 752, 1271
Tsp45I	GTSAC	1 cut(s)	680
TspDTI	ATGAA	8 cut(s)	17, 444, 816, 825, 890, 1206, 1239, 1251
TspGWI	ACGGA	1 cut(s)	1053
TspRI	CASTG	3 cut(s)	150, 568, 1174
Tth111I	GACNNNGTC	1 cut(s)	398
Van91I	CCANNNNNTGG	1 cut(s)	844
Vha464I	CTTAAG	1 cut(s)	556
XapI	RAATTY	1 cut(s)	614
XceI	RCATGY	2 cut(s)	136, 1205
XhoI	CTCGAG	2 cut(s)	390, 453
XmiI	GTMKAC	1 cut(s)	530
XspI	CTAG	3 cut(s)	596, 854, 1208
Zsp2I	ATGCAT	1 cut(s)	1203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.