Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0002982

Physical Location & Seq

Genomic Coordinates Forward (+)

21452955 .. 21457059

Gene Structure 4105 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G248200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2544 bp

ATGGTCAATAGTGGTACTGCTAGTAAACAAGGGGAATCCTTAAGAAAAGGAAGTAAGAACAAGAGAAAATTAGCTGACCCTTCTCTGGAGAATACAACTTCTCCCCTAACTGTATTCCCTCAGTGTGAATTATCTCCAGAAATGTGTCCAAAATTGAGTGACAATGTGTCAGTGGATGCTGGGGTGGTTCAGCCCAAAGAAGAAGTGGAAGCGGGAGCCTTTGAATGTACAGATTGGGATGATCCCATTGTGTGTCAGCTGGAAGAACTGTTGCTGTCTTATTTGCAAGCAATTTTCCAGAGTGCAGTTAAGCAGGTTGCTGAATGCGGGTACAGTGAGGAGGTTGCTGAAAAGGCTGTTTCAAGAGGCGGCCTTTACATTGGCAGTAAAGACCCTCTATCAAATATTGTTAATGATACTCTGGAATTTCTTAACAAAGGGAAGGGTTTTGATGCTTCAAGAGATAATGAGTTTGGTAATTTACAGCACCTGGTGGAGTACACAATGCTAGAAATGATCAGTGTGCTTAGGGAGGTGAGGCCATCCTTATCAGTTGCGGAAGCAATGTGGTGGCTGTTGATCTGTGACTTAAACATTTTGCAAGCCTGTACATCGGAAGGAGATCCATTAAGTGCTTTTGAAGAATCCTCAAGAGCGAGCTCCTCTGATTCTTCCTCTACCCAATTAAGATCAGAGGCAACTAGCTTTGAAACCATCCATCCAAATCCCAATCCCAACCAAGCAAATTCCTCAATGCCTCCACTCTCCCATGCTCAAGAGAGAGCTCCTCAAAACAATTCGACTGAAGCACTCAAATTTGGAAGTTTCCCTAACGTGCCCAACTCCAAACATTCTCATGCGCCTGGAGGGCTAACCCCTGAGAAAGACAGTTTGTCATCTATGCTTGACAGTCTTGAAAAATGCTTAGGCTTCACTGAGGAATATATGCAAAACAAATCTCAAACATGTACCTCTGAAGAAAAGTCAGGAGCCGTTCGAAAATGGCGCACCAAGAAAGAATTAGCAGCACTTCGGAGGAAGTCCTTCCATATGGAGAGAAATTACAGGGCCTATGGGTCAAAAGGAGGCTTCAAGTCAGGGAAAGTCACAGTTGGTGGTTTCTTTGTGGAGAAGAGGATGAAGCCTCCGCCTGAACTTCCTGGAGCACGTACAACAGTTGGTTCCTCAAAGTCAAGTGCTCAAGGTGGAGCCACCATCCCTTCAGCAGATGGAAGGCATCATGCTTCCACCAGTAGTCCATCTGCTTCACCTGCAACAGGTTGCTCATCAACAGTACCTGAAAAAGGTGCCATATCTTCCTTGCCTTCTACAGATACCAAGTTTTCCCAGAAATCTGGGTTGGAAGAGATATCTGGACCTAAGACCCCAGTTTGCACCTCCGAATCCCCCAAGATTCTTGATTACTGTGCTGGCATTCCATATGATAAGTCTCTAGGAAAGTATGTACCACAAGATGAGAAGGATGAGCTGATTTTGAAGCTAGTTCCTAGGCTGGAGGAGCTGCAGAATGAGCTACAAGGCTGGACTAAGTGGGCCAATGAGAAGGTTATGCAGGTTTCTCGTAGGCTTAGTAAGGAACGGCCTGAACTTAAAACACTGAGGCAAGAGAAGGAAGAAGCGGAGCAATTTAAGAAGGAGAAACAAATGTTGGAGGAGAACACCATGAAGAGGCTGTCTGAGTTGGAGCATGCCTTGAACAATGCAACTGGCCAGGTTGAGAGAGCTAACTCTAATATCTGTAGGCTTGAGGTGGAGAATTCCACTCTGAAAAAGAAGTTGCTTGATGCCAAAAAAATAGCTTTGGAGAAAGCAAGACGTCACCTGGATGCATTAGACCAAGAGCAGAGATCACTGAAAAGGGCCCAGGCATGGGAGGGGGAGATAAGCTCATTGCAGGAGGAGCTTGAAACAGAAAAGAAGAAGGTGGCTTCACTTCAACAGGATCTAGGCAAGGCAAAAAGTGTCCATCATCAAATCGAGGCTAGATGGAAACGGGAGAACACAGAAAATGAGAAACTACTTGCACATGCTAACTCCATGAGAAATGAAAGAGAACAGCGTGAAGCTTCGGCAAAAGTGGAGGAGGACAAGATCAAACAGAAGGCAGAAAATGATATGCAGAAGTATATGGAAGACATCAAAGAACTCGAGAGCAAATTATCTGAATTTCAATTGAAGTCTGACTCTTCAAGAATTGCAGCACTAAGAAGGGGAGCTGCTGGAAGCTTTGGAGGTTGCCTGTTAGACAGAAAGACACTGATGGCAACAAAGGGAACCCAAAATTTTACCAGCATCAAGAGGGTAATGAATTCCGAGGACTATTTTGGGACTGGAAGTTTGAGACAGGACCGCGAGTGTGTGATGTGCCTATCTGAGGAGATGTCAGTGGTTTTCCTTCCGTGTGCGCATCAGGTTGTTTGTGCAAAATGCAATGAGCTTCATAAGAAACAAGGAATGGAGGACTGCCCTTCTTGTAGGACCCCAATTCAACGAAGGATCAATGTGCAGTATGCTCATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010646 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

848

Amino Acids

94.21

Weight (kDa)

6.65

Isoelectric Point (pI)

56.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002982)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03365 AT1G03365 AT4G03000 AT4G03000 AT4G03000 AT4G03000 AT4G03000 AT4G03000
fragaria_vesca	FvH4_2g24221 FvH4_2g24221 FvH4_2g24221
malus_domestica	MD03G1272000.v1.1 MD11G1292600.v1.1
prunus_persica	Prupe.8G248200_v2.0.a1 Prupe.8G248200_v2.0.a1 Prupe.8G248200_v2.0.a1 Prupe.8G248200_v2.0.a1 Prupe.8G248200_v2.0.a1 Prupe.8G248200_v2.0.a1
pyrus_communis	pycom03g21660 pycom11g25900
rosa_chinensis	RchiOBHm_Chr6g0292011
rosa_laevigata	RLG00000012070
rosa_multiflora	Rmu_co8265653.1_g000001 Rmu_co8382791.1_g000001 Rmu_sc0008666.1_g000003
rosa_roxburghii	Rroxscaffold_7G00175490 Rroxscaffold_7G00178030
rosa_rugosa	Rorug06G0222500 Rorug06G0222600 Rorug06G0222700 Rorug06G0222800 Rorug06G0222900
rosa_samantha	Rh6AG336400 Rh6BG343700 Rh6CG350000 Rh6DG336700
rosa_wichuraiana	Rw6G029280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1279
AatII	GACGTC	1 cut(s)	1840
Acc16I	TGCGCA	1 cut(s)	2427
Acc36I	ACCTGC	3 cut(s)	304, 1279, 1564
AccB1I	GGYRCC	1 cut(s)	1307
AccII	CGCG	1 cut(s)	2373
AciI	CCGC	7 cut(s)	212, 327, 369, 557, 1148, 1640, 2371
AclWI	GGATC	4 cut(s)	236, 617, 1971, 2525
AcoI	YGGCCR	1 cut(s)	1729
AcsI	RAATTY	7 cut(s)	425, 745, 815, 1777, 2186, 2302, 2329
AcuI	CTGAAG	3 cut(s)	825, 996, 1206
AcyI	GRCGYC	1 cut(s)	1837
AdeI	CACNNNGTG	1 cut(s)	493
AfaI	GTAC	9 cut(s)	16, 229, 332, 500, 610, 970, 1171, 1296, 1467
AfiI	CCNNNNNNNGG	7 cut(s)	85, 1277, 1304, 1689, 1890, 1891, 2395
AflII	CTTAAG	1 cut(s)	40
AflIII	ACRYGT	1 cut(s)	965
AhdI	GACNNNNNGTC	2 cut(s)	166, 892
AjnI	CCWGG	6 cut(s)	489, 862, 1159, 1731, 1842, 1884
AjuI	GAANNNNNNNTTGG	4 cut(s)	1343, 1375, 1652, 1684
Alw21I	GWGCWC	4 cut(s)	662, 787, 1168, 1201
Alw26I	GTCTC	2 cut(s)	1455, 2356
AlwI	GGATC	4 cut(s)	236, 617, 1971, 2525
AlwNI	CAGNNNCTG	2 cut(s)	490, 1298
Ama87I	CYCGRG	1 cut(s)	2168
AoxI	GGCC	7 cut(s)	370, 539, 1068, 1554, 1601, 1729, 1881
ApaI	GGGCCC	1 cut(s)	1885
ApeKI	GCWGC	4 cut(s)	1025, 1522, 2219, 2237
ApoI	RAATTY	7 cut(s)	425, 745, 815, 1777, 2186, 2302, 2329
ArsI	GACNNNNNNTTYG	2 cut(s)	2341, 2373
Asp700I	GAANNNNTTC	1 cut(s)	1043
AspA2I	CCTAGG	1 cut(s)	1508
AspLEI	GCGC	3 cut(s)	862, 1008, 2428
AspS9I	GGNCC	7 cut(s)	1068, 1376, 1554, 1881, 1882, 2368, 2499
AsuHPI	GGTGA	3 cut(s)	547, 1260, 1832
AsuII	TTCGAA	1 cut(s)	997
AvaI	CYCGRG	1 cut(s)	2168
AvaII	GGWCC	3 cut(s)	1376, 2368, 2499
AvrII	CCTAGG	1 cut(s)	1508
BaeGI	GKGCMC	2 cut(s)	840, 1885
BalI	TGGCCA	1 cut(s)	1731
BanI	GGYRCC	1 cut(s)	1307
BanII	GRGCYC	3 cut(s)	662, 787, 1885
BbsI	GAAGAC	1 cut(s)	2160
Bbv12I	GWGCWC	4 cut(s)	662, 787, 1168, 1201
BbvI	GCAGC	4 cut(s)	1037, 1509, 2224, 2231
BccI	CCATC	9 cut(s)	550, 722, 726, 1223, 1223, 1267, 1995, 2001, 2275
BceAI	ACGGC	2 cut(s)	977, 1616
BcgI	CGANNNNNNTGC	2 cut(s)	1562, 1596
BciT130I	CCWGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
BclI	TGATCA	1 cut(s)	516
BcoDI	GTCTC	2 cut(s)	1455, 2356
BfaI	CTAG	8 cut(s)	21, 509, 702, 1454, 1502, 1509, 1967, 2004
BfmI	CTRYAG	3 cut(s)	1329, 1523, 1759
BfrI	CTTAAG	1 cut(s)	40
BfuAI	ACCTGC	3 cut(s)	304, 1279, 1564
BglI	GCCNNNNNGGC	1 cut(s)	868
BisI	GCNGC	5 cut(s)	370, 1026, 1523, 2220, 2238
BlnI	CCTAGG	1 cut(s)	1508
BlsI	GCNGC	5 cut(s)	371, 1027, 1524, 2221, 2239
Bme1390I	CCNGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
Bme18I	GGWCC	3 cut(s)	1376, 2368, 2499
BmeRI	GACNNNNNGTC	2 cut(s)	166, 892
BmeT110I	CYCGRG	1 cut(s)	2168
BmgT120I	GGNCC	7 cut(s)	1068, 1376, 1554, 1881, 1882, 2368, 2499
BmiI	GGNNCC	8 cut(s)	217, 991, 1183, 1210, 1309, 1883, 2296, 2501
BmrFI	CCNGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
BmrI	ACTGGG	1 cut(s)	1382
BmsI	GCATC	7 cut(s)	166, 442, 1246, 1795, 1837, 2322, 2437
BmuI	ACTGGG	1 cut(s)	1382
BpiI	GAAGAC	1 cut(s)	2160
BplI	GAGNNNNNCTC	4 cut(s)	772, 804, 1892, 1924
BpmI	CTGGAG	5 cut(s)	107, 120, 885, 1182, 1535
Bpu10I	CCTNAGC	2 cut(s)	527, 925
Bpu14I	TTCGAA	1 cut(s)	997
BpuEI	CTTGAG	4 cut(s)	634, 759, 1185, 1787
BsaAI	YACGTR	1 cut(s)	1169
BsaHI	GRCGYC	1 cut(s)	1837
BsaJI	CCNNGG	3 cut(s)	1508, 1884, 2334
BsaXI	ACNNNNNCTCC	2 cut(s)	85, 115
Bsc4I	CCNNNNNNNGG	7 cut(s)	85, 1277, 1304, 1689, 1890, 1891, 2395
Bse1I	ACTGG	4 cut(s)	1251, 1388, 1732, 2356
Bse3DI	GCAATG	3 cut(s)	570, 1910, 2458
BseBI	CCWGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
BseDI	CCNNGG	3 cut(s)	1508, 1884, 2334
BseLI	CCNNNNNNNGG	7 cut(s)	85, 1277, 1304, 1689, 1890, 1891, 2395
BseMI	GCAATG	3 cut(s)	570, 1910, 2458
BseMII	CTCAG	6 cut(s)	134, 870, 927, 1610, 1689, 2385
BseNI	ACTGG	4 cut(s)	1251, 1388, 1732, 2356
BseRI	GAGGAG	8 cut(s)	353, 652, 777, 1532, 1688, 1934, 2117, 2411
BseSI	GKGCMC	2 cut(s)	840, 1885
BseXI	GCAGC	4 cut(s)	1037, 1509, 2224, 2231
BseYI	CCCAGC	1 cut(s)	179
BsgI	GTGCAG	1 cut(s)	324
Bsh1236I	CGCG	1 cut(s)	2373
BshFI	GGCC	7 cut(s)	372, 541, 1070, 1556, 1603, 1731, 1883
BshNI	GGYRCC	1 cut(s)	1307
BsiHKAI	GWGCWC	4 cut(s)	662, 787, 1168, 1201
BsiHKCI	CYCGRG	1 cut(s)	2168
BslFI	GGGAC	1 cut(s)	2362
BslI	CCNNNNNNNGG	7 cut(s)	85, 1277, 1304, 1689, 1890, 1891, 2395
BsmAI	GTCTC	2 cut(s)	1455, 2356
BsmFI	GGGAC	1 cut(s)	2362
BsmI	GAATGC	2 cut(s)	329, 1434
BsnI	GGCC	7 cut(s)	372, 541, 1070, 1556, 1603, 1731, 1883
BsoBI	CYCGRG	1 cut(s)	2168
Bsp119I	TTCGAA	1 cut(s)	997
Bsp120I	GGGCCC	1 cut(s)	1881
Bsp1286I	GDGCHC	6 cut(s)	662, 787, 840, 1168, 1201, 1885
Bsp1407I	TGTACA	2 cut(s)	227, 608
Bsp143I	GATC	9 cut(s)	241, 516, 579, 622, 689, 1868, 1963, 2112, 2517
BspACI	CCGC	7 cut(s)	212, 327, 369, 557, 1148, 1640, 2371
BspANI	GGCC	7 cut(s)	372, 541, 1070, 1556, 1603, 1731, 1883
BspCNI	CTCAG	6 cut(s)	133, 871, 928, 1611, 1690, 2386
BspFNI	CGCG	1 cut(s)	2373
BspLI	GGNNCC	8 cut(s)	217, 991, 1183, 1210, 1309, 1883, 2296, 2501
BspMAI	CTGCAG	1 cut(s)	1527
BspMI	ACCTGC	3 cut(s)	304, 1279, 1564
BspPI	GGATC	4 cut(s)	236, 617, 1971, 2525
BspT104I	TTCGAA	1 cut(s)	997
BspT107I	GGYRCC	1 cut(s)	1307
BspTI	CTTAAG	1 cut(s)	40
BsrDI	GCAATG	3 cut(s)	570, 1910, 2458
BsrGI	TGTACA	2 cut(s)	227, 608
BsrI	ACTGG	4 cut(s)	1251, 1388, 1732, 2356
BssECI	CCNNGG	3 cut(s)	1508, 1884, 2334
BssMI	GATC	9 cut(s)	241, 516, 579, 622, 689, 1868, 1963, 2112, 2517
BssNI	GRCGYC	1 cut(s)	1837
BssT1I	CCWWGG	1 cut(s)	1508
Bst2UI	CCWGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
Bst4CI	ACNGT	9 cut(s)	112, 270, 335, 890, 911, 1111, 1177, 1294, 1427
Bst6I	CTCTTC	4 cut(s)	1127, 1359, 1682, 2212
BstACI	GRCGYC	1 cut(s)	1837
BstAFI	CTTAAG	1 cut(s)	40
BstAUI	TGTACA	2 cut(s)	227, 608
BstBAI	YACGTR	1 cut(s)	1169
BstBI	TTCGAA	1 cut(s)	997
BstC8I	GCNNGC	5 cut(s)	288, 603, 658, 1432, 1710
BstENI	CCTNNNNNAGG	3 cut(s)	1275, 1302, 2393
BstFNI	CGCG	1 cut(s)	2373
BstHHI	GCGC	3 cut(s)	862, 1008, 2428
BstKTI	GATC	9 cut(s)	244, 519, 582, 625, 692, 1871, 1966, 2115, 2520
BstMAI	GTCTC	2 cut(s)	1455, 2356
BstMBI	GATC	9 cut(s)	241, 516, 579, 622, 689, 1868, 1963, 2112, 2517
BstMWI	GCNNNNNNNGC	6 cut(s)	353, 868, 1271, 1519, 1531, 1921
BstNI	CCWGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
BstNSI	RCATGY	3 cut(s)	969, 1712, 2051
BstSCI	CCNGG	6 cut(s)	489, 862, 1159, 1731, 1842, 1884
BstSFI	CTRYAG	3 cut(s)	1329, 1523, 1759
BstSLI	GKGCMC	2 cut(s)	840, 1885
BstUI	CGCG	1 cut(s)	2373
BstV1I	GCAGC	4 cut(s)	1037, 1509, 2224, 2231
BstV2I	GAAGAC	1 cut(s)	2160
BstX2I	RGATCY	2 cut(s)	622, 1963
BstXI	CCANNNNNNTGG	1 cut(s)	1355
BstYI	RGATCY	2 cut(s)	622, 1963
BsuRI	GGCC	7 cut(s)	372, 541, 1070, 1556, 1603, 1731, 1883
BtsIMutI	CAGTG	9 cut(s)	128, 177, 340, 526, 933, 1616, 1871, 2276, 2412
BveI	ACCTGC	3 cut(s)	304, 1279, 1564
Cac8I	GCNNGC	5 cut(s)	288, 603, 658, 1432, 1710
CaiI	CAGNNNCTG	2 cut(s)	490, 1298
CfoI	GCGC	3 cut(s)	862, 1008, 2428
Cfr13I	GGNCC	7 cut(s)	1068, 1376, 1554, 1881, 1882, 2368, 2499
CsiI	ACCWGGT	1 cut(s)	489
Csp6I	GTAC	9 cut(s)	15, 228, 331, 499, 609, 969, 1170, 1295, 1466
CviAII	CATG	9 cut(s)	770, 857, 966, 1241, 1684, 1709, 1890, 2048, 2059
CviQI	GTAC	9 cut(s)	15, 228, 331, 499, 609, 969, 1170, 1295, 1466
DpnI	GATC	9 cut(s)	243, 518, 581, 624, 691, 1870, 1965, 2114, 2519
DpnII	GATC	9 cut(s)	241, 516, 579, 622, 689, 1868, 1963, 2112, 2517
DraIII	CACNNNGTG	1 cut(s)	493
DriI	GACNNNNNGTC	2 cut(s)	166, 892
EaeI	YGGCCR	1 cut(s)	1729
Eam1104I	CTCTTC	4 cut(s)	1127, 1359, 1682, 2212
Eam1105I	GACNNNNNGTC	2 cut(s)	166, 892
EarI	CTCTTC	4 cut(s)	1127, 1359, 1682, 2212
EciI	GGCGGA	1 cut(s)	1137
Ecl136II	GAGCTC	2 cut(s)	660, 785
Eco130I	CCWWGG	1 cut(s)	1508
Eco24I	GRGCYC	3 cut(s)	662, 787, 1885
Eco32I	GATATC	1 cut(s)	1371
Eco47I	GGWCC	3 cut(s)	1376, 2368, 2499
Eco53kI	GAGCTC	2 cut(s)	660, 785
Eco57I	CTGAAG	3 cut(s)	825, 996, 1206
Eco88I	CYCGRG	1 cut(s)	2168
EcoICRI	GAGCTC	2 cut(s)	660, 785
EcoNI	CCTNNNNNAGG	3 cut(s)	1275, 1302, 2393
EcoO109I	RGGNCCY	3 cut(s)	1068, 1881, 2499
EcoRI	GAATTC	2 cut(s)	1777, 2329
EcoRII	CCWGG	6 cut(s)	489, 862, 1159, 1731, 1842, 1884
EcoRV	GATATC	1 cut(s)	1371
EcoT14I	CCWWGG	1 cut(s)	1508
EcoT22I	ATGCAT	1 cut(s)	1852
EcoT38I	GRGCYC	3 cut(s)	662, 787, 1885
ErhI	CCWWGG	1 cut(s)	1508
FaeI	CATG	9 cut(s)	773, 860, 969, 1244, 1687, 1712, 1893, 2051, 2062
FaqI	GGGAC	1 cut(s)	2362
FatI	CATG	9 cut(s)	769, 856, 965, 1240, 1683, 1708, 1889, 2047, 2058
FauI	CCCGC	2 cut(s)	205, 320
FauNDI	CATATG	2 cut(s)	1050, 1441
FbaI	TGATCA	1 cut(s)	516
Fnu4HI	GCNGC	5 cut(s)	370, 1026, 1523, 2220, 2238
FriOI	GRGCYC	3 cut(s)	662, 787, 1885
Fsp4HI	GCNGC	5 cut(s)	370, 1026, 1523, 2220, 2238
FspAI	RTGCGCAY	1 cut(s)	2427
FspBI	CTAG	8 cut(s)	21, 509, 702, 1454, 1502, 1509, 1967, 2004
FspI	TGCGCA	1 cut(s)	2427
GlaI	GCGC	3 cut(s)	861, 1007, 2427
GluI	GCNGC	5 cut(s)	370, 1026, 1523, 2220, 2238
GsaI	CCCAGC	1 cut(s)	183
GsuI	CTGGAG	5 cut(s)	107, 120, 885, 1182, 1535
HaeIII	GGCC	7 cut(s)	372, 541, 1070, 1556, 1603, 1731, 1883
HhaI	GCGC	3 cut(s)	862, 1008, 2428
Hin1I	GRCGYC	1 cut(s)	1837
Hin1II	CATG	9 cut(s)	773, 860, 969, 1244, 1687, 1712, 1893, 2051, 2062
Hin6I	GCGC	3 cut(s)	860, 1006, 2426
HinP1I	GCGC	3 cut(s)	860, 1006, 2426
HindIII	AAGCTT	2 cut(s)	2085, 2245
HinfI	GANTC	6 cut(s)	35, 644, 668, 1403, 1414, 2204
HphI	GGTGA	3 cut(s)	547, 1260, 1832
Hpy166II	GTNNAC	2 cut(s)	26, 501
Hpy8I	GTNNAC	2 cut(s)	26, 501
HpyCH4III	ACNGT	9 cut(s)	112, 270, 335, 890, 911, 1111, 1177, 1294, 1427
HpyCH4IV	ACGT	3 cut(s)	834, 1168, 1837
HpyF10VI	GCNNNNNNNGC	6 cut(s)	353, 868, 1271, 1519, 1531, 1921
HpySE526I	ACGT	3 cut(s)	834, 1168, 1837
Hsp92I	GRCGYC	1 cut(s)	1837
Hsp92II	CATG	9 cut(s)	773, 860, 969, 1244, 1687, 1712, 1893, 2051, 2062
HspAI	GCGC	3 cut(s)	860, 1006, 2426
Ksp22I	TGATCA	1 cut(s)	516
Kzo9I	GATC	9 cut(s)	241, 516, 579, 622, 689, 1868, 1963, 2112, 2517
Lsp1109I	GCAGC	4 cut(s)	1037, 1509, 2224, 2231
LweI	GCATC	7 cut(s)	166, 442, 1246, 1795, 1837, 2322, 2437
MabI	ACCWGGT	1 cut(s)	489
MaeI	CTAG	8 cut(s)	21, 509, 702, 1454, 1502, 1509, 1967, 2004
MaeII	ACGT	3 cut(s)	834, 1168, 1837
MaeIII	GTNAC	4 cut(s)	158, 584, 1105, 1838
MalI	GATC	9 cut(s)	243, 518, 581, 624, 691, 1870, 1965, 2114, 2519
MboI	GATC	9 cut(s)	241, 516, 579, 622, 689, 1868, 1963, 2112, 2517
MfeI	CAATTG	1 cut(s)	2192
MflI	RGATCY	2 cut(s)	622, 1963
MhlI	GDGCHC	6 cut(s)	662, 787, 840, 1168, 1201, 1885
MlsI	TGGCCA	1 cut(s)	1731
MluNI	TGGCCA	1 cut(s)	1731
MlyI	GAGTC	1 cut(s)	2198
MmeI	TCCRAC	3 cut(s)	1341, 1650, 1683
Mox20I	TGGCCA	1 cut(s)	1731
Mph1103I	ATGCAT	1 cut(s)	1852
MroXI	GAANNNNTTC	1 cut(s)	1043
MscI	TGGCCA	1 cut(s)	1731
MseI	TTAA	9 cut(s)	41, 309, 411, 432, 590, 629, 686, 1611, 1650
MslI	CAYNNNNRTG	2 cut(s)	855, 1845
Msp20I	TGGCCA	1 cut(s)	1731
MspA1I	CMGCKG	1 cut(s)	259
MspCI	CTTAAG	1 cut(s)	40
MspR9I	CCNGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
MunI	CAATTG	1 cut(s)	2192
Mva1269I	GAATGC	2 cut(s)	329, 1434
MvaI	CCWGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
MvnI	CGCG	1 cut(s)	2373
MwoI	GCNNNNNNNGC	6 cut(s)	353, 868, 1271, 1519, 1531, 1921
NdeI	CATATG	2 cut(s)	1050, 1441
NdeII	GATC	9 cut(s)	241, 516, 579, 622, 689, 1868, 1963, 2112, 2517
NlaIII	CATG	9 cut(s)	773, 860, 969, 1244, 1687, 1712, 1893, 2051, 2062
NlaIV	GGNNCC	8 cut(s)	217, 991, 1183, 1210, 1309, 1883, 2296, 2501
NmuCI	GTSAC	4 cut(s)	158, 584, 1105, 1838
NsbI	TGCGCA	1 cut(s)	2427
NsiI	ATGCAT	1 cut(s)	1852
NspI	RCATGY	3 cut(s)	969, 1712, 2051
NspV	TTCGAA	1 cut(s)	997
PaeI	GCATGC	1 cut(s)	1712
PaeR7I	CTCGAG	1 cut(s)	2168
PaqCI	CACCTGC	1 cut(s)	1279
PciI	ACATGT	1 cut(s)	965
PctI	GAATGC	2 cut(s)	329, 1434
PdmI	GAANNNNTTC	1 cut(s)	1043
PfeI	GAWTC	5 cut(s)	35, 644, 668, 1403, 1414
PfoI	TCCNGGA	1 cut(s)	1159
PkrI	GCNGC	5 cut(s)	371, 1027, 1524, 2221, 2239
PleI	GAGTC	1 cut(s)	2198
PpsI	GAGTC	1 cut(s)	2198
Ppu21I	YACGTR	1 cut(s)	1169
PpuMI	RGGWCCY	1 cut(s)	2499
PscI	ACATGT	1 cut(s)	965
Psp124BI	GAGCTC	2 cut(s)	662, 787
Psp5II	RGGWCCY	1 cut(s)	2499
Psp6I	CCWGG	6 cut(s)	489, 862, 1159, 1731, 1842, 1884
PspFI	CCCAGC	1 cut(s)	179
PspGI	CCWGG	6 cut(s)	489, 862, 1159, 1731, 1842, 1884
PspN4I	GGNNCC	8 cut(s)	217, 991, 1183, 1210, 1309, 1883, 2296, 2501
PspOMI	GGGCCC	1 cut(s)	1881
PspPI	GGNCC	7 cut(s)	1068, 1376, 1554, 1881, 1882, 2368, 2499
PspPPI	RGGWCCY	1 cut(s)	2499
PstI	CTGCAG	1 cut(s)	1527
PstNI	CAGNNNCTG	2 cut(s)	490, 1298
PsuI	RGATCY	2 cut(s)	622, 1963
PvuII	CAGCTG	1 cut(s)	259
RsaI	GTAC	9 cut(s)	16, 229, 332, 500, 610, 970, 1171, 1296, 1467
RsaNI	GTAC	9 cut(s)	15, 228, 331, 499, 609, 969, 1170, 1295, 1466
RseI	CAYNNNNRTG	2 cut(s)	855, 1845
SacI	GAGCTC	2 cut(s)	662, 787
SaqAI	TTAA	9 cut(s)	41, 309, 411, 432, 590, 629, 686, 1611, 1650
SatI	GCNGC	5 cut(s)	370, 1026, 1523, 2220, 2238
Sau3AI	GATC	9 cut(s)	241, 516, 579, 622, 689, 1868, 1963, 2112, 2517
Sau96I	GGNCC	7 cut(s)	1068, 1376, 1554, 1881, 1882, 2368, 2499
SchI	GAGTC	1 cut(s)	2198
ScrFI	CCNGG	6 cut(s)	491, 864, 1161, 1733, 1844, 1886
SduI	GDGCHC	6 cut(s)	662, 787, 840, 1168, 1201, 1885
SexAI	ACCWGGT	1 cut(s)	489
SfaNI	GCATC	7 cut(s)	166, 442, 1246, 1795, 1837, 2322, 2437
SfcI	CTRYAG	3 cut(s)	1329, 1523, 1759
Sfr274I	CTCGAG	1 cut(s)	2168
SfuI	TTCGAA	1 cut(s)	997
SinI	GGWCC	3 cut(s)	1376, 2368, 2499
SlaI	CTCGAG	1 cut(s)	2168
SmiMI	CAYNNNNRTG	2 cut(s)	855, 1845
SmlI	CTYRAG	6 cut(s)	40, 649, 774, 1200, 1766, 2168
SmoI	CTYRAG	6 cut(s)	40, 649, 774, 1200, 1766, 2168
SphI	GCATGC	1 cut(s)	1712
SsiI	CCGC	7 cut(s)	212, 327, 369, 557, 1148, 1640, 2371
SspI	AATATT	1 cut(s)	406
SspMI	CTAG	8 cut(s)	21, 509, 702, 1454, 1502, 1509, 1967, 2004
SstI	GAGCTC	2 cut(s)	662, 787
StyD4I	CCNGG	6 cut(s)	489, 862, 1159, 1731, 1842, 1884
StyI	CCWWGG	1 cut(s)	1508
TaaI	ACNGT	9 cut(s)	112, 270, 335, 890, 911, 1111, 1177, 1294, 1427
TaiI	ACGT	3 cut(s)	837, 1171, 1840
TaqI	TCGA	4 cut(s)	800, 997, 1998, 2169
TatI	WGTACW	3 cut(s)	227, 498, 608
TauI	GCSGC	1 cut(s)	372
TfiI	GAWTC	5 cut(s)	35, 644, 668, 1403, 1414
Tru1I	TTAA	9 cut(s)	41, 309, 411, 432, 590, 629, 686, 1611, 1650
Tru9I	TTAA	9 cut(s)	41, 309, 411, 432, 590, 629, 686, 1611, 1650
TscAI	CASTG	9 cut(s)	128, 177, 340, 526, 940, 1623, 1878, 2283, 2412
TseFI	GTSAC	4 cut(s)	158, 584, 1105, 1838
TseI	GCWGC	4 cut(s)	1025, 1522, 2219, 2237
Tsp45I	GTSAC	4 cut(s)	158, 584, 1105, 1838
TspDTI	ATGAA	5 cut(s)	1154, 1700, 2082, 2342, 2450
TspGWI	ACGGA	1 cut(s)	2409
TspRI	CASTG	9 cut(s)	128, 177, 340, 526, 940, 1623, 1878, 2283, 2412
Vha464I	CTTAAG	1 cut(s)	40
VpaK11BI	GGWCC	3 cut(s)	1376, 2368, 2499
XagI	CCTNNNNNAGG	3 cut(s)	1275, 1302, 2393
XapI	RAATTY	7 cut(s)	425, 745, 815, 1777, 2186, 2302, 2329
XceI	RCATGY	3 cut(s)	969, 1712, 2051
XcmI	CCANNNNNNNNNTGG	1 cut(s)	202
XhoI	CTCGAG	1 cut(s)	2168
XmaJI	CCTAGG	1 cut(s)	1508
XmnI	GAANNNNTTC	1 cut(s)	1043
XspI	CTAG	8 cut(s)	21, 509, 702, 1454, 1502, 1509, 1967, 2004
ZraI	GACGTC	1 cut(s)	1838
Zsp2I	ATGCAT	1 cut(s)	1852

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.