Prupe.8G253100_v2.0.a1

Sodium hydrogen exchanger

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21674857 .. 21678473
3617 bp
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UTR
Exon/CDS
Intron
Prupe.8G253100.1

Sequence Viewer

Length: 1656 bp
ATGGGTTTCCCTTTGGTCTCTGCTTTGATGAGACTGGGGGTGAAATCGACGACCACCGACGAAGCTCCCATAAATTCCATAACTTTATTCGTGGTGCTCCTTTGTTTTTGCATTGTGATTGGTCATCTTCTGGAGAAAAGTCGATGGATGACTGAATCAGTCACTGCCCTTCTCATTGGCCTTTGTACTGGAATTGTTATTCTTCTAAATACCGAATGGAAAAGCTCACGCGTCTTAGTTTTTAATGAAGATATTTTCTTCATATATCTTCTGCCACCTATTATATTCAATGCTGGATTCCAGGTGAAAAAGAAGCGGTTTTTCCAGAACTTCATGACAATCATGTTGTTGGGTGCTGTTGGCAGTTTTATATCATTTGTCATTGTATGGCTAGGTTCGTTGCACTTATTCGAAAAAATGGACATTGGTTTCCTGGAGATGAACGATTATCTTGCACTTGGAGCAATCCTCTCGGCTACAGATACTGTTTGCACCCTTCAGGTGCTTAATCAAGATGAGACGCCTTTACTGTACAGTCTAGTCTTCGGAGAAGGTGTTGTAAATGATGCCACATCTGTGGTACTTTTCAATGCAATCCAGAGATTTGATCTCTCTCACATCAACTCAACCATTGTGATGGAGTTTATTGGCAATTTCTTATATCTGTTTCTGACAAGCACATTGCTGGGTATAGCTGTCGGATTGCTTAGTGCATACATCATGAAGAAGTTGTACCTTGGCAGGCACTCTACTGATCGTGAAGTTGCTCTTATGATTCTAATGGCTTATTTGTCATATATGGTGGCAGAACTGTTCGATTTAAGTGGCATTCTTACTGTTTTCTTCTGCGGGATTGTCATGTCTCACTATACCTGGCACAATGTAACCGAAAGATCAAGAGTTACAACCAAGCATGCTTTTGCAACATTATCATTTGTTTCGGAGATTTTCATCTTCCTGTATGTTGGTATGGATGCCTTGGACATTGAGAAGTGGAAATTTGTAAGCGAGAGTCCTGGGACATCAATTGGAGTCAGTTCGATATTACTTGGCCTGGTTCTGATTGGAAGAGCTGCTTTTGTATTTCCCCTATGTTTTGCTTCGAACTTAACTAGGAAACATCAGAGCGACAAAATTGGATTTAAGCAACAGGTAACGGTATGGTGGGCAGGACTCATGAGAGGTGCTGTATCTGTGGCTCTTGCTTATAATTGGTTTACAATGTCAGGCCATACTCAACGCCGTGGAAATGCAGTCATGATCACTAGTACAATCACAGTTGTTCTCTTCACCAATGTGGTGTGCGGATTATTGACTAAGCCTCTTGTAAGGTGGTTGTTGCCACAACATAAACACTCAGGCAGCATCATGTCCTCTGAATTATTATCATCTGAGATGTCTCTGGCTATGCCACTCCTCACTAATGGGGACGATCCAAAGTGGGATATGGCCGGTGATAGAATTCCACGTCGAACTGTTCTGCGTATGCTCTTGATGACACCGGTTCGTTCTGTGCATTACTACTGGAGAATGTTTGATGACAGTTTCATGCGTCCTGTTTTTGGCGGTAGAGGATTTGTGCCATTCGCTCCTGGTTCACCCAACGAAGATATTGTGCACCAATCGGTACTTGGGGAGCAGCAGATAGTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

552

Amino Acids

61.75

Weight (kDa)

7.21

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1209
AccII CGCG 1 cut(s) 231
AciI CCGC 4 cut(s) 316, 849, 1305, 1566
AclWI GGATC 1 cut(s) 1427
AcoI YGGCCR 1 cut(s) 1449
AcsI RAATTY 3 cut(s) 73, 998, 1461
AcuI CTGAAG 1 cut(s) 482
AcyI GRCGYC 1 cut(s) 521
AfaI GTAC 6 cut(s) 187, 533, 582, 734, 1270, 1629
AfiI CCNNNNNNNGG 1 cut(s) 1562
AflIII ACRYGT 1 cut(s) 229
AgeI ACCGGT 1 cut(s) 1501
AgsI TTSAA 2 cut(s) 289, 589
AhlI ACTAGT 1 cut(s) 1265
AjiI CACGTC 1 cut(s) 1469
AjnI CCWGG 6 cut(s) 300, 432, 872, 1015, 1053, 1591
AleI CACNNNNGTG 2 cut(s) 575, 1295
AluBI AGCT 4 cut(s) 65, 225, 695, 1073
AluI AGCT 4 cut(s) 65, 225, 695, 1073
Alw21I GWGCWC 2 cut(s) 99, 1620
Alw26I GTCTC 5 cut(s) 22, 25, 512, 867, 1404
Alw44I GTGCAC 1 cut(s) 1616
AlwI GGATC 1 cut(s) 1427
AlwNI CAGNNNCTG 2 cut(s) 164, 485
AoxI GGCC 4 cut(s) 178, 1051, 1228, 1449
ApaLI GTGCAC 1 cut(s) 1616
ApeKI GCWGC 3 cut(s) 1073, 1362, 1639
ApoI RAATTY 3 cut(s) 73, 998, 1461
AsiGI ACCGGT 1 cut(s) 1501
AsuHPI GGTGA 5 cut(s) 52, 316, 1282, 1466, 1590
AsuII TTCGAA 2 cut(s) 411, 1103
BaeGI GKGCMC 1 cut(s) 1620
BarI GAAGNNNNNNTAC 2 cut(s) 716, 748
BbsI GAAGAC 1 cut(s) 535
Bbv12I GWGCWC 2 cut(s) 99, 1620
BbvI GCAGC 3 cut(s) 1060, 1374, 1651
BccI CCATC 2 cut(s) 138, 631
BceAI ACGGC 1 cut(s) 1227
BcgI CGANNNNNNTGC 4 cut(s) 434, 453, 468, 487
BciT130I CCWGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
BclI TGATCA 1 cut(s) 1260
BcoDI GTCTC 5 cut(s) 22, 25, 512, 867, 1404
BcuI ACTAGT 1 cut(s) 1265
BfaI CTAG 4 cut(s) 392, 539, 1113, 1266
BfmI CTRYAG 1 cut(s) 477
BisI GCNGC 3 cut(s) 1074, 1363, 1640
BlsI GCNGC 3 cut(s) 1075, 1364, 1641
Bme1390I CCNGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
BmgBI CACGTC 1 cut(s) 1469
BmrFI CCNGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
BmrI ACTGGG 1 cut(s) 44
BmsI GCATC 3 cut(s) 556, 964, 1374
BmuI ACTGGG 1 cut(s) 44
BpiI GAAGAC 1 cut(s) 535
BplI GAGNNNNNCTC 2 cut(s) 453, 485
BpmI CTGGAG 3 cut(s) 152, 455, 1546
Bpu14I TTCGAA 2 cut(s) 411, 1103
BsaBI GATNNNNATC 1 cut(s) 950
BsaHI GRCGYC 1 cut(s) 521
BsaI GGTCTC 1 cut(s) 22
BsaJI CCNNGG 4 cut(s) 736, 978, 1016, 1243
BsaWI WCCGGW 1 cut(s) 1501
BsaXI ACNNNNNCTCC 2 cut(s) 540, 570
Bsc4I CCNNNNNNNGG 1 cut(s) 1562
Bse118I RCCGGY 2 cut(s) 1451, 1501
Bse1I ACTGG 3 cut(s) 39, 193, 1529
Bse3DI GCAATG 1 cut(s) 680
Bse8I GATNNNNATC 1 cut(s) 950
BseBI CCWGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
BseDI CCNNGG 4 cut(s) 736, 978, 1016, 1243
BseGI GGATG 2 cut(s) 153, 979
BseJI GATNNNNATC 1 cut(s) 950
BseLI CCNNNNNNNGG 1 cut(s) 1562
BseMI GCAATG 1 cut(s) 680
BseMII CTCAG 2 cut(s) 1371, 1383
BseNI ACTGG 3 cut(s) 39, 193, 1529
BseRI GAGGAG 1 cut(s) 1406
BseSI GKGCMC 1 cut(s) 1620
BseXI GCAGC 3 cut(s) 1060, 1374, 1651
BseYI CCCAGC 1 cut(s) 685
Bsh1236I CGCG 1 cut(s) 231
BshFI GGCC 4 cut(s) 180, 1053, 1230, 1451
BshTI ACCGGT 1 cut(s) 1501
BsiHKAI GWGCWC 2 cut(s) 99, 1620
BsiSI CCGG 2 cut(s) 1452, 1502
BslFI GGGAC 2 cut(s) 1033, 1442
BslI CCNNNNNNNGG 1 cut(s) 1562
BsmAI GTCTC 5 cut(s) 22, 25, 512, 867, 1404
BsmBI CGTCTC 1 cut(s) 512
BsmFI GGGAC 2 cut(s) 1033, 1442
BsmI GAATGC 1 cut(s) 828
BsnI GGCC 4 cut(s) 180, 1053, 1230, 1451
Bso31I GGTCTC 1 cut(s) 22
Bsp119I TTCGAA 2 cut(s) 411, 1103
Bsp1286I GDGCHC 2 cut(s) 99, 1620
Bsp1407I TGTACA 1 cut(s) 531
Bsp143I GATC 5 cut(s) 607, 754, 893, 1260, 1432
BspACI CCGC 4 cut(s) 316, 849, 1305, 1566
BspANI GGCC 4 cut(s) 180, 1053, 1230, 1451
BspCNI CTCAG 2 cut(s) 1370, 1384
BspFNI CGCG 1 cut(s) 231
BspHI TCATGA 4 cut(s) 333, 720, 1176, 1257
BspPI GGATC 1 cut(s) 1427
BspQI GCTCTTC 1 cut(s) 1063
BspT104I TTCGAA 2 cut(s) 411, 1103
BspTNI GGTCTC 1 cut(s) 22
BsrDI GCAATG 1 cut(s) 680
BsrFI RCCGGY 2 cut(s) 1451, 1501
BsrGI TGTACA 1 cut(s) 531
BsrI ACTGG 3 cut(s) 39, 193, 1529
BssAI RCCGGY 2 cut(s) 1451, 1501
BssECI CCNNGG 4 cut(s) 736, 978, 1016, 1243
BssMI GATC 5 cut(s) 607, 754, 893, 1260, 1432
BssNI GRCGYC 1 cut(s) 521
BssT1I CCWWGG 2 cut(s) 736, 978
Bst2UI CCWGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
Bst4CI ACNGT 9 cut(s) 487, 531, 536, 813, 838, 1159, 1279, 1477, 1544
Bst6I CTCTTC 2 cut(s) 1063, 1292
BstACI GRCGYC 1 cut(s) 521
BstAUI TGTACA 1 cut(s) 531
BstBI TTCGAA 2 cut(s) 411, 1103
BstC8I GCNNGC 2 cut(s) 743, 915
BstDEI CTNAG 5 cut(s) 235, 707, 1317, 1357, 1392
BstDSI CCRYGG 1 cut(s) 1243
BstF5I GGATG 2 cut(s) 153, 979
BstFNI CGCG 1 cut(s) 231
BstKTI GATC 5 cut(s) 610, 757, 896, 1263, 1435
BstMAI GTCTC 5 cut(s) 22, 25, 512, 867, 1404
BstMBI GATC 5 cut(s) 607, 754, 893, 1260, 1432
BstMWI GCNNNNNNNGC 1 cut(s) 461
BstNI CCWGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
BstNSI RCATGY 1 cut(s) 917
BstSCI CCNGG 6 cut(s) 300, 432, 872, 1015, 1053, 1591
BstSFI CTRYAG 1 cut(s) 477
BstSLI GKGCMC 1 cut(s) 1620
BstUI CGCG 1 cut(s) 231
BstV1I GCAGC 3 cut(s) 1060, 1374, 1651
BstV2I GAAGAC 1 cut(s) 535
BstXI CCANNNNNNTGG 2 cut(s) 577, 637
BsuRI GGCC 4 cut(s) 180, 1053, 1230, 1451
BtgI CCRYGG 1 cut(s) 1243
BtrI CACGTC 1 cut(s) 1469
BtsCI GGATG 2 cut(s) 153, 979
BtsI GCAGTG 1 cut(s) 162
BtsIMutI CAGTG 1 cut(s) 162
Cac8I GCNNGC 2 cut(s) 743, 915
CaiI CAGNNNCTG 2 cut(s) 164, 485
CciI TCATGA 4 cut(s) 333, 720, 1176, 1257
Cfr10I RCCGGY 2 cut(s) 1451, 1501
CseI GACGC 3 cut(s) 220, 529, 1541
Csp6I GTAC 6 cut(s) 186, 532, 581, 733, 1269, 1628
CspAI ACCGGT 1 cut(s) 1501
CviAII CATG 9 cut(s) 334, 343, 721, 859, 914, 1177, 1258, 1369, 1549
CviQI GTAC 6 cut(s) 186, 532, 581, 733, 1269, 1628
DdeI CTNAG 5 cut(s) 235, 707, 1317, 1357, 1392
DpnI GATC 5 cut(s) 609, 756, 895, 1262, 1434
DpnII GATC 5 cut(s) 607, 754, 893, 1260, 1432
EaeI YGGCCR 1 cut(s) 1449
Eam1104I CTCTTC 2 cut(s) 1063, 1292
EarI CTCTTC 2 cut(s) 1063, 1292
Eco130I CCWWGG 2 cut(s) 736, 978
Eco31I GGTCTC 1 cut(s) 22
Eco57I CTGAAG 1 cut(s) 482
EcoRI GAATTC 1 cut(s) 1461
EcoRII CCWGG 6 cut(s) 300, 432, 872, 1015, 1053, 1591
EcoT14I CCWWGG 2 cut(s) 736, 978
ErhI CCWWGG 2 cut(s) 736, 978
Esp3I CGTCTC 1 cut(s) 512
FaeI CATG 9 cut(s) 337, 346, 724, 862, 917, 1180, 1261, 1372, 1552
FalI AAGNNNNNCTT 4 cut(s) 753, 785, 1060, 1092
FaqI GGGAC 2 cut(s) 1033, 1442
FatI CATG 9 cut(s) 333, 342, 720, 858, 913, 1176, 1257, 1368, 1548
FauI CCCGC 1 cut(s) 842
FbaI TGATCA 1 cut(s) 1260
Fnu4HI GCNGC 3 cut(s) 1074, 1363, 1640
FokI GGATG 2 cut(s) 160, 986
Fsp4HI GCNGC 3 cut(s) 1074, 1363, 1640
FspBI CTAG 4 cut(s) 392, 539, 1113, 1266
GluI GCNGC 3 cut(s) 1074, 1363, 1640
GsaI CCCAGC 1 cut(s) 689
GsuI CTGGAG 3 cut(s) 152, 455, 1546
HaeIII GGCC 4 cut(s) 180, 1053, 1230, 1451
HapII CCGG 2 cut(s) 1452, 1502
HgaI GACGC 3 cut(s) 220, 529, 1541
Hin1I GRCGYC 1 cut(s) 521
Hin1II CATG 9 cut(s) 337, 346, 724, 862, 917, 1180, 1261, 1372, 1552
HinfI GANTC 6 cut(s) 155, 297, 775, 1012, 1032, 1173
HpaII CCGG 2 cut(s) 1452, 1502
HphI GGTGA 5 cut(s) 52, 316, 1282, 1466, 1590
Hpy166II GTNNAC 3 cut(s) 1218, 1598, 1618
Hpy188I TCNGA 8 cut(s) 548, 672, 701, 943, 1062, 1125, 1378, 1393
Hpy8I GTNNAC 3 cut(s) 1218, 1598, 1618
Hpy99I CGWCG 3 cut(s) 52, 62, 1473
HpyAV CCTTC 3 cut(s) 179, 506, 545
HpyCH4III ACNGT 9 cut(s) 487, 531, 536, 813, 838, 1159, 1279, 1477, 1544
HpyCH4IV ACGT 1 cut(s) 1468
HpyF10VI GCNNNNNNNGC 1 cut(s) 461
HpyF3I CTNAG 5 cut(s) 235, 707, 1317, 1357, 1392
HpySE526I ACGT 1 cut(s) 1468
Hsp92I GRCGYC 1 cut(s) 521
Hsp92II CATG 9 cut(s) 337, 346, 724, 862, 917, 1180, 1261, 1372, 1552
Ksp22I TGATCA 1 cut(s) 1260
Kzo9I GATC 5 cut(s) 607, 754, 893, 1260, 1432
LguI GCTCTTC 1 cut(s) 1063
LmnI GCTCC 5 cut(s) 70, 102, 461, 1594, 1636
Lsp1109I GCAGC 3 cut(s) 1060, 1374, 1651
LweI GCATC 3 cut(s) 556, 964, 1374
MaeI CTAG 4 cut(s) 392, 539, 1113, 1266
MaeII ACGT 1 cut(s) 1468
MaeIII GTNAC 4 cut(s) 160, 883, 901, 1153
MalI GATC 5 cut(s) 609, 756, 895, 1262, 1434
MboI GATC 5 cut(s) 607, 754, 893, 1260, 1432
MfeI CAATTG 1 cut(s) 1026
MhlI GDGCHC 2 cut(s) 99, 1620
MluCI AATT 9 cut(s) 73, 192, 652, 998, 1026, 1134, 1210, 1379, 1461
MluI ACGCGT 1 cut(s) 229
MlyI GAGTC 3 cut(s) 1021, 1041, 1167
MmeI TCCRAC 1 cut(s) 679
MnlI CCTC 6 cut(s) 479, 1175, 1332, 1384, 1427, 1565
MseI TTAA 5 cut(s) 243, 507, 821, 1109, 1143
MslI CAYNNNNRTG 3 cut(s) 575, 635, 1295
MspI CCGG 2 cut(s) 1452, 1502
MspR9I CCNGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
MunI CAATTG 1 cut(s) 1026
Mva1269I GAATGC 1 cut(s) 828
MvaI CCWGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
MvnI CGCG 1 cut(s) 231
MwoI GCNNNNNNNGC 1 cut(s) 461
NdeII GATC 5 cut(s) 607, 754, 893, 1260, 1432
NlaIII CATG 9 cut(s) 337, 346, 724, 862, 917, 1180, 1261, 1372, 1552
NmeAIII GCCGAG 1 cut(s) 452
NmuCI GTSAC 1 cut(s) 160
NspI RCATGY 1 cut(s) 917
NspV TTCGAA 2 cut(s) 411, 1103
OliI CACNNNNGTG 2 cut(s) 575, 1295
PaeI GCATGC 1 cut(s) 917
PagI TCATGA 4 cut(s) 333, 720, 1176, 1257
PciSI GCTCTTC 1 cut(s) 1063
PctI GAATGC 1 cut(s) 828
PfeI GAWTC 3 cut(s) 155, 297, 775
PfoI TCCNGGA 1 cut(s) 432
PinAI ACCGGT 1 cut(s) 1501
PkrI GCNGC 3 cut(s) 1075, 1364, 1641
PleI GAGTC 3 cut(s) 1020, 1040, 1167
PpsI GAGTC 3 cut(s) 1020, 1040, 1167
PsiI TTATAA 1 cut(s) 1209
Psp6I CCWGG 6 cut(s) 300, 432, 872, 1015, 1053, 1591
PspFI CCCAGC 1 cut(s) 685
PspGI CCWGG 6 cut(s) 300, 432, 872, 1015, 1053, 1591
PstNI CAGNNNCTG 2 cut(s) 164, 485
RsaI GTAC 6 cut(s) 187, 533, 582, 734, 1270, 1629
RsaNI GTAC 6 cut(s) 186, 532, 581, 733, 1269, 1628
RseI CAYNNNNRTG 3 cut(s) 575, 635, 1295
SapI GCTCTTC 1 cut(s) 1063
SaqAI TTAA 5 cut(s) 243, 507, 821, 1109, 1143
SatI GCNGC 3 cut(s) 1074, 1363, 1640
Sau3AI GATC 5 cut(s) 607, 754, 893, 1260, 1432
SchI GAGTC 3 cut(s) 1021, 1041, 1167
ScrFI CCNGG 6 cut(s) 302, 434, 874, 1017, 1055, 1593
SduI GDGCHC 2 cut(s) 99, 1620
SfaNI GCATC 3 cut(s) 556, 964, 1374
SfcI CTRYAG 1 cut(s) 477
SfuI TTCGAA 2 cut(s) 411, 1103
SmiMI CAYNNNNRTG 3 cut(s) 575, 635, 1295
SpeI ACTAGT 1 cut(s) 1265
SphI GCATGC 1 cut(s) 917
Sse9I AATT 9 cut(s) 73, 192, 652, 998, 1026, 1134, 1210, 1379, 1461
SsiI CCGC 4 cut(s) 316, 849, 1305, 1566
SspMI CTAG 4 cut(s) 392, 539, 1113, 1266
StyD4I CCNGG 6 cut(s) 300, 432, 872, 1015, 1053, 1591
StyI CCWWGG 2 cut(s) 736, 978
TaaI ACNGT 9 cut(s) 487, 531, 536, 813, 838, 1159, 1279, 1477, 1544
TaiI ACGT 1 cut(s) 1471
TaqI TCGA 7 cut(s) 47, 142, 411, 816, 1040, 1103, 1471
TasI AATT 9 cut(s) 73, 192, 652, 998, 1026, 1134, 1210, 1379, 1461
TatI WGTACW 3 cut(s) 185, 531, 1268
TfiI GAWTC 3 cut(s) 155, 297, 775
Tru1I TTAA 5 cut(s) 243, 507, 821, 1109, 1143
Tru9I TTAA 5 cut(s) 243, 507, 821, 1109, 1143
TscAI CASTG 1 cut(s) 169
TseFI GTSAC 1 cut(s) 160
TseI GCWGC 3 cut(s) 1073, 1362, 1639
Tsp45I GTSAC 1 cut(s) 160
TspDTI ATGAA 7 cut(s) 250, 261, 322, 455, 737, 940, 1537
TspRI CASTG 1 cut(s) 169
VneI GTGCAC 1 cut(s) 1616
XapI RAATTY 3 cut(s) 73, 998, 1461
XceI RCATGY 1 cut(s) 917
XcmI CCANNNNNNNNNTGG 1 cut(s) 1628
XspI CTAG 4 cut(s) 392, 539, 1113, 1266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.