Prupe.8G254600_v2.0.a1

Monothiol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0004905
Physical Location & Seq
Forward (+)
21753951 .. 21754722
772 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G254600.1

Sequence Viewer

Length: 324 bp
ATGGATACGATAACGAGCATGGTGGCCGAAAGGCCGGTGGTGATCTTCAGCAGGACCTCAAGCTGCATGAGCCACACCATCAAGTCACTGATACGTAGCTATGGGGCAAACCCTACAGTGTACGAGCTGGATGAAGTTGCAAATGGGCAGGCTATTGAAAGGGCACTGGTTCAGCACTTCCAATGCCAACCAAGTGTGCCGGCTGTTTTCATAGGGCAGCAGTTCATTGGTGGAGCTGATCAGGTCATGAGCCTCCAAGTCCAAAACCAGCTTGTCCCACGGCTCATAAGGGCCAACGCTATTTGGGTTTGGAACAGAACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

108

Amino Acids

11.93

Weight (kDa)

7.85

Isoelectric Point (pI)

39.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 24
AcuI CTGAAG 1 cut(s) 31
AfaI GTAC 1 cut(s) 122
AgsI TTSAA 1 cut(s) 158
AluBI AGCT 5 cut(s) 63, 99, 127, 236, 271
AluI AGCT 5 cut(s) 63, 99, 127, 236, 271
AlwNI CAGNNNCTG 1 cut(s) 321
AoxI GGCC 3 cut(s) 24, 32, 291
ApeKI GCWGC 2 cut(s) 63, 217
AspS9I GGNCC 2 cut(s) 54, 291
AsuHPI GGTGA 1 cut(s) 52
AvaII GGWCC 1 cut(s) 54
BaeGI GKGCMC 1 cut(s) 166
BbvI GCAGC 2 cut(s) 50, 229
BccI CCATC 1 cut(s) 86
BceAI ACGGC 1 cut(s) 296
BclI TGATCA 1 cut(s) 238
BfmI CTRYAG 1 cut(s) 114
BisI GCNGC 2 cut(s) 64, 218
BlsI GCNGC 2 cut(s) 65, 219
Bme18I GGWCC 1 cut(s) 54
BmgT120I GGNCC 2 cut(s) 54, 291
BpuEI CTTGAG 1 cut(s) 43
BsaAI YACGTR 1 cut(s) 95
BsaJI CCNNGG 1 cut(s) 278
Bse118I RCCGGY 2 cut(s) 34, 199
Bse1I ACTGG 1 cut(s) 171
BseDI CCNNGG 1 cut(s) 278
BseGI GGATG 1 cut(s) 136
BseNI ACTGG 1 cut(s) 171
BseSI GKGCMC 1 cut(s) 166
BseXI GCAGC 2 cut(s) 50, 229
BshFI GGCC 3 cut(s) 26, 34, 293
BsiSI CCGG 2 cut(s) 35, 200
BslFI GGGAC 1 cut(s) 260
BsmFI GGGAC 1 cut(s) 260
BsnI GGCC 3 cut(s) 26, 34, 293
Bsp1286I GDGCHC 1 cut(s) 166
Bsp143I GATC 2 cut(s) 42, 238
BspANI GGCC 3 cut(s) 26, 34, 293
BspHI TCATGA 1 cut(s) 246
BsrFI RCCGGY 2 cut(s) 34, 199
BsrI ACTGG 1 cut(s) 171
BssAI RCCGGY 2 cut(s) 34, 199
BssECI CCNNGG 1 cut(s) 278
BssMI GATC 2 cut(s) 42, 238
Bst4CI ACNGT 1 cut(s) 118
BstBAI YACGTR 1 cut(s) 95
BstC8I GCNNGC 2 cut(s) 150, 201
BstDSI CCRYGG 1 cut(s) 278
BstF5I GGATG 1 cut(s) 136
BstKTI GATC 2 cut(s) 45, 241
BstMBI GATC 2 cut(s) 42, 238
BstMWI GCNNNNNNNGC 1 cut(s) 69
BstSFI CTRYAG 1 cut(s) 114
BstSLI GKGCMC 1 cut(s) 166
BstSNI TACGTA 1 cut(s) 95
BstV1I GCAGC 2 cut(s) 50, 229
BsuRI GGCC 3 cut(s) 26, 34, 293
BtgI CCRYGG 1 cut(s) 278
BtsCI GGATG 1 cut(s) 136
BtsIMutI CAGTG 3 cut(s) 86, 123, 164
Cac8I GCNNGC 2 cut(s) 150, 201
CaiI CAGNNNCTG 1 cut(s) 321
CciI TCATGA 1 cut(s) 246
Cfr10I RCCGGY 2 cut(s) 34, 199
Cfr13I GGNCC 2 cut(s) 54, 291
Csp6I GTAC 1 cut(s) 121
CviAII CATG 3 cut(s) 19, 67, 247
CviQI GTAC 1 cut(s) 121
DpnI GATC 2 cut(s) 44, 240
DpnII GATC 2 cut(s) 42, 238
EaeI YGGCCR 1 cut(s) 24
Eco105I TACGTA 1 cut(s) 95
Eco47I GGWCC 1 cut(s) 54
Eco57I CTGAAG 1 cut(s) 31
EcoO109I RGGNCCY 1 cut(s) 54
FaeI CATG 3 cut(s) 22, 70, 250
FaiI YATR 6 cut(s) 20, 68, 102, 212, 248, 287
FaqI GGGAC 1 cut(s) 260
FatI CATG 3 cut(s) 18, 66, 246
FbaI TGATCA 1 cut(s) 238
Fnu4HI GCNGC 2 cut(s) 64, 218
FokI GGATG 1 cut(s) 143
Fsp4HI GCNGC 2 cut(s) 64, 218
GluI GCNGC 2 cut(s) 64, 218
HaeIII GGCC 3 cut(s) 26, 34, 293
HapII CCGG 2 cut(s) 35, 200
Hin1II CATG 3 cut(s) 22, 70, 250
HpaII CCGG 2 cut(s) 35, 200
HphI GGTGA 1 cut(s) 52
Hpy166II GTNNAC 1 cut(s) 121
Hpy188III TCNNGA 1 cut(s) 247
Hpy8I GTNNAC 1 cut(s) 121
HpyCH4III ACNGT 1 cut(s) 118
HpyCH4IV ACGT 1 cut(s) 94
HpyCH4V TGCA 2 cut(s) 66, 140
HpyF10VI GCNNNNNNNGC 1 cut(s) 69
HpySE526I ACGT 1 cut(s) 94
Hsp92II CATG 3 cut(s) 22, 70, 250
KroI GCCGGC 1 cut(s) 199
KroNI GCCGGC 1 cut(s) 201
Ksp22I TGATCA 1 cut(s) 238
Kzo9I GATC 2 cut(s) 42, 238
LmnI GCTCC 1 cut(s) 233
LpnPI CCDG 8 cut(s) 37, 48, 113, 134, 152, 213, 227, 281
Lsp1109I GCAGC 2 cut(s) 50, 229
MaeII ACGT 1 cut(s) 94
MaeIII GTNAC 1 cut(s) 84
MalI GATC 2 cut(s) 44, 240
MboI GATC 2 cut(s) 42, 238
MboII GAAGA 1 cut(s) 37
MhlI GDGCHC 1 cut(s) 166
MnlI CCTC 2 cut(s) 67, 263
MroNI GCCGGC 1 cut(s) 199
MspI CCGG 2 cut(s) 35, 200
MwoI GCNNNNNNNGC 1 cut(s) 69
NaeI GCCGGC 1 cut(s) 201
NdeII GATC 2 cut(s) 42, 238
NgoMIV GCCGGC 1 cut(s) 199
NlaIII CATG 3 cut(s) 22, 70, 250
NmuCI GTSAC 1 cut(s) 84
PagI TCATGA 1 cut(s) 246
PdiI GCCGGC 1 cut(s) 201
PkrI GCNGC 2 cut(s) 65, 219
Ppu21I YACGTR 1 cut(s) 95
PpuMI RGGWCCY 1 cut(s) 54
Psp5II RGGWCCY 1 cut(s) 54
PspPI GGNCC 2 cut(s) 54, 291
PspPPI RGGWCCY 1 cut(s) 54
PstNI CAGNNNCTG 1 cut(s) 321
RsaI GTAC 1 cut(s) 122
RsaNI GTAC 1 cut(s) 121
SatI GCNGC 2 cut(s) 64, 218
Sau3AI GATC 2 cut(s) 42, 238
Sau96I GGNCC 2 cut(s) 54, 291
SduI GDGCHC 1 cut(s) 166
SetI ASST 9 cut(s) 59, 65, 97, 101, 129, 238, 246, 273, 323
SfcI CTRYAG 1 cut(s) 114
SinI GGWCC 1 cut(s) 54
SmlI CTYRAG 1 cut(s) 58
SmoI CTYRAG 1 cut(s) 58
SnaBI TACGTA 1 cut(s) 95
TaaI ACNGT 1 cut(s) 118
TaiI ACGT 1 cut(s) 97
TscAI CASTG 3 cut(s) 93, 123, 171
TseFI GTSAC 1 cut(s) 84
TseI GCWGC 2 cut(s) 63, 217
Tsp45I GTSAC 1 cut(s) 84
TspDTI ATGAA 3 cut(s) 147, 199, 214
TspRI CASTG 3 cut(s) 93, 123, 171
VpaK11BI GGWCC 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.