Homeobox protein knotted-1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32040 AT4G32040 |
| fragaria_vesca | FvH4_1g01720 FvH4_1g01720 FvH4_1g01720 |
| malus_domestica | MD02G1012900.v1.1 MD15G1159800.v1.1 |
| prunus_persica | Prupe.7G254700_v2.0.a1 Prupe.7G254700_v2.0.a1 |
| pyrus_communis | pycom02g01200 pycom06g06940 pycom15g14350 pycom15g14360 |
| rosa_chinensis | RchiOBHm_Chr2g0086661 |
| rosa_laevigata | RLG00000015771 |
| rosa_multiflora | Rmu_co8121786.1_g000001 Rmu_co8238721.1_g000001 Rmu_sc0002376.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00154340 |
| rosa_rugosa | Rorug01G0468200 Rorug01G0468200 |
| rosa_samantha | Rh2AG020200 Rh2BG020100 Rh2CG019700 Rh2DG020600 |
| rosa_wichuraiana | Rw2G001660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1076 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 170 |
| Acc16I | TGCGCA | 1 cut(s) | 854 |
| Acc36I | ACCTGC | 1 cut(s) | 1076 |
| AccBSI | CCGCTC | 2 cut(s) | 76, 866 |
| AccI | GTMKAC | 2 cut(s) | 426, 831 |
| AccII | CGCG | 6 cut(s) | 59, 152, 287, 365, 420, 777 |
| AccIII | TCCGGA | 1 cut(s) | 80 |
| AclWI | GGATC | 2 cut(s) | 368, 398 |
| AcsI | RAATTY | 1 cut(s) | 846 |
| AcuI | CTGAAG | 3 cut(s) | 118, 812, 1082 |
| AcvI | CACGTG | 1 cut(s) | 346 |
| AcyI | GRCGYC | 1 cut(s) | 368 |
| AfaI | GTAC | 1 cut(s) | 236 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 80, 943 |
| AflIII | ACRYGT | 1 cut(s) | 345 |
| AgsI | TTSAA | 4 cut(s) | 295, 529, 988, 1111 |
| AjiI | CACGTC | 2 cut(s) | 93, 169 |
| AjnI | CCWGG | 2 cut(s) | 669, 877 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1012, 1044 |
| AluBI | AGCT | 9 cut(s) | 86, 110, 132, 201, 271, 331, 403, 592, 612 |
| AluI | AGCT | 9 cut(s) | 86, 110, 132, 201, 271, 331, 403, 592, 612 |
| Alw21I | GWGCWC | 1 cut(s) | 88 |
| Alw26I | GTCTC | 1 cut(s) | 606 |
| AlwI | GGATC | 2 cut(s) | 368, 398 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 201, 604, 790 |
| Aor13HI | TCCGGA | 1 cut(s) | 80 |
| AoxI | GGCC | 6 cut(s) | 139, 297, 713, 733, 929, 954 |
| ApoI | RAATTY | 1 cut(s) | 846 |
| AseI | ATTAAT | 1 cut(s) | 1011 |
| AspLEI | GCGC | 6 cut(s) | 287, 343, 420, 442, 777, 855 |
| AspS9I | GGNCC | 4 cut(s) | 64, 713, 734, 762 |
| AsuC2I | CCSGG | 1 cut(s) | 187 |
| AsuHPI | GGTGA | 3 cut(s) | 5, 644, 1100 |
| AvaII | GGWCC | 2 cut(s) | 64, 762 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 606, 639 |
| BanII | GRGCYC | 1 cut(s) | 88 |
| BauI | CACGAG | 1 cut(s) | 404 |
| BbrPI | CACGTG | 1 cut(s) | 346 |
| BbsI | GAAGAC | 2 cut(s) | 270, 954 |
| Bbv12I | GWGCWC | 1 cut(s) | 88 |
| BccI | CCATC | 2 cut(s) | 571, 692 |
| BceAI | ACGGC | 2 cut(s) | 166, 256 |
| BciT130I | CCWGG | 2 cut(s) | 671, 879 |
| BciVI | GTATCC | 1 cut(s) | 634 |
| BclI | TGATCA | 1 cut(s) | 595 |
| BcnI | CCSGG | 1 cut(s) | 187 |
| BcoDI | GTCTC | 1 cut(s) | 606 |
| BfmI | CTRYAG | 2 cut(s) | 202, 539 |
| BfoI | RGCGCY | 1 cut(s) | 443 |
| BfuAI | ACCTGC | 1 cut(s) | 1076 |
| BfuI | GTATCC | 1 cut(s) | 634 |
| Bme1390I | CCNGG | 3 cut(s) | 187, 671, 879 |
| Bme18I | GGWCC | 2 cut(s) | 64, 762 |
| BmgBI | CACGTC | 2 cut(s) | 93, 169 |
| BmgT120I | GGNCC | 4 cut(s) | 64, 713, 734, 762 |
| BmiI | GGNNCC | 1 cut(s) | 215 |
| BmrFI | CCNGG | 3 cut(s) | 187, 671, 879 |
| BoxI | GACNNNNGTC | 1 cut(s) | 371 |
| BpiI | GAAGAC | 2 cut(s) | 270, 954 |
| BpmI | CTGGAG | 1 cut(s) | 293 |
| BpuEI | CTTGAG | 1 cut(s) | 376 |
| BpuMI | CCSGG | 1 cut(s) | 187 |
| BsaAI | YACGTR | 1 cut(s) | 346 |
| BsaHI | GRCGYC | 1 cut(s) | 368 |
| BsaJI | CCNNGG | 4 cut(s) | 386, 564, 627, 723 |
| BsaWI | WCCGGW | 2 cut(s) | 80, 216 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 674, 704 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 80, 943 |
| Bse118I | RCCGGY | 1 cut(s) | 370 |
| Bse1I | ACTGG | 1 cut(s) | 1007 |
| BseAI | TCCGGA | 1 cut(s) | 80 |
| BseBI | CCWGG | 2 cut(s) | 671, 879 |
| BseDI | CCNNGG | 4 cut(s) | 386, 564, 627, 723 |
| BseGI | GGATG | 3 cut(s) | 313, 463, 478 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 80, 943 |
| BseNI | ACTGG | 1 cut(s) | 1007 |
| BseRI | GAGGAG | 2 cut(s) | 266, 269 |
| BsgI | GTGCAG | 2 cut(s) | 428, 986 |
| Bsh1236I | CGCG | 6 cut(s) | 59, 152, 287, 365, 420, 777 |
| Bsh1285I | CGRYCG | 2 cut(s) | 211, 375 |
| BshFI | GGCC | 6 cut(s) | 141, 299, 715, 735, 931, 956 |
| BsiEI | CGRYCG | 2 cut(s) | 211, 375 |
| BsiHKAI | GWGCWC | 1 cut(s) | 88 |
| BsiSI | CCGG | 4 cut(s) | 81, 186, 217, 371 |
| BslFI | GGGAC | 1 cut(s) | 324 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 80, 943 |
| BsmAI | GTCTC | 1 cut(s) | 606 |
| BsmFI | GGGAC | 1 cut(s) | 324 |
| BsmI | GAATGC | 1 cut(s) | 919 |
| BsnI | GGCC | 6 cut(s) | 141, 299, 715, 735, 931, 956 |
| Bsp1286I | GDGCHC | 1 cut(s) | 88 |
| Bsp13I | TCCGGA | 1 cut(s) | 80 |
| Bsp143I | GATC | 6 cut(s) | 208, 360, 376, 390, 595, 993 |
| Bsp19I | CCATGG | 2 cut(s) | 564, 723 |
| Bsp68I | TCGCGA | 1 cut(s) | 365 |
| BspANI | GGCC | 6 cut(s) | 141, 299, 715, 735, 931, 956 |
| BspEI | TCCGGA | 1 cut(s) | 80 |
| BspFNI | CGCG | 6 cut(s) | 59, 152, 287, 365, 420, 777 |
| BspHI | TCATGA | 1 cut(s) | 495 |
| BspLI | GGNNCC | 1 cut(s) | 215 |
| BspMAI | CTGCAG | 2 cut(s) | 206, 543 |
| BspMI | ACCTGC | 1 cut(s) | 1076 |
| BspPI | GGATC | 2 cut(s) | 368, 398 |
| BspQI | GCTCTTC | 3 cut(s) | 185, 856, 1058 |
| BsrBI | CCGCTC | 2 cut(s) | 76, 866 |
| BsrFI | RCCGGY | 1 cut(s) | 370 |
| BsrI | ACTGG | 1 cut(s) | 1007 |
| BssAI | RCCGGY | 1 cut(s) | 370 |
| BssECI | CCNNGG | 4 cut(s) | 386, 564, 627, 723 |
| BssMI | GATC | 6 cut(s) | 208, 360, 376, 390, 595, 993 |
| BssNI | GRCGYC | 1 cut(s) | 368 |
| BssSI | CACGAG | 1 cut(s) | 404 |
| BssT1I | CCWWGG | 2 cut(s) | 564, 723 |
| Bst2BI | CACGAG | 1 cut(s) | 404 |
| Bst2UI | CCWGG | 2 cut(s) | 671, 879 |
| Bst6I | CTCTTC | 4 cut(s) | 185, 243, 856, 1058 |
| BstACI | GRCGYC | 1 cut(s) | 368 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 201 |
| BstBAI | YACGTR | 1 cut(s) | 346 |
| BstC8I | GCNNGC | 2 cut(s) | 119, 980 |
| BstDSI | CCRYGG | 3 cut(s) | 564, 627, 723 |
| BstF5I | GGATG | 3 cut(s) | 313, 463, 478 |
| BstFNI | CGCG | 6 cut(s) | 59, 152, 287, 365, 420, 777 |
| BstH2I | RGCGCY | 1 cut(s) | 443 |
| BstHHI | GCGC | 6 cut(s) | 287, 343, 420, 442, 777, 855 |
| BstKTI | GATC | 6 cut(s) | 211, 363, 379, 393, 598, 996 |
| BstMAI | GTCTC | 1 cut(s) | 606 |
| BstMBI | GATC | 6 cut(s) | 208, 360, 376, 390, 595, 993 |
| BstMCI | CGRYCG | 2 cut(s) | 211, 375 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 138, 201, 204, 325, 415, 446, 569, 578, 781 |
| BstNI | CCWGG | 2 cut(s) | 671, 879 |
| BstNSI | RCATGY | 1 cut(s) | 551 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 371 |
| BstSCI | CCNGG | 3 cut(s) | 185, 669, 877 |
| BstSFI | CTRYAG | 2 cut(s) | 202, 539 |
| BstUI | CGCG | 6 cut(s) | 59, 152, 287, 365, 420, 777 |
| BstV2I | GAAGAC | 2 cut(s) | 270, 954 |
| BsuI | GTATCC | 1 cut(s) | 634 |
| BsuRI | GGCC | 6 cut(s) | 141, 299, 715, 735, 931, 956 |
| BtgI | CCRYGG | 3 cut(s) | 564, 627, 723 |
| BtrI | CACGTC | 2 cut(s) | 93, 169 |
| BtsCI | GGATG | 3 cut(s) | 313, 463, 478 |
| BtsI | GCAGTG | 1 cut(s) | 579 |
| BtsIMutI | CAGTG | 1 cut(s) | 579 |
| BtuMI | TCGCGA | 1 cut(s) | 365 |
| BveI | ACCTGC | 1 cut(s) | 1076 |
| Cac8I | GCNNGC | 2 cut(s) | 119, 980 |
| CaiI | CAGNNNCTG | 3 cut(s) | 201, 604, 790 |
| CciI | TCATGA | 1 cut(s) | 495 |
| CfoI | GCGC | 6 cut(s) | 287, 343, 420, 442, 777, 855 |
| Cfr10I | RCCGGY | 1 cut(s) | 370 |
| Cfr13I | GGNCC | 4 cut(s) | 64, 713, 734, 762 |
| CseI | GACGC | 2 cut(s) | 158, 376 |
| CsiI | ACCWGGT | 1 cut(s) | 669 |
| Csp6I | GTAC | 1 cut(s) | 235 |
| CviAII | CATG | 8 cut(s) | 469, 496, 548, 565, 652, 724, 797, 1093 |
| CviQI | GTAC | 1 cut(s) | 235 |
| DpnI | GATC | 6 cut(s) | 210, 362, 378, 392, 597, 995 |
| DpnII | GATC | 6 cut(s) | 208, 360, 376, 390, 595, 993 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 170 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 170 |
| Eam1104I | CTCTTC | 4 cut(s) | 185, 243, 856, 1058 |
| EarI | CTCTTC | 4 cut(s) | 185, 243, 856, 1058 |
| EciI | GGCGGA | 2 cut(s) | 104, 258 |
| Ecl136II | GAGCTC | 1 cut(s) | 86 |
| Eco130I | CCWWGG | 2 cut(s) | 564, 723 |
| Eco24I | GRGCYC | 1 cut(s) | 88 |
| Eco47I | GGWCC | 2 cut(s) | 64, 762 |
| Eco53kI | GAGCTC | 1 cut(s) | 86 |
| Eco57I | CTGAAG | 3 cut(s) | 118, 812, 1082 |
| Eco72I | CACGTG | 1 cut(s) | 346 |
| EcoICRI | GAGCTC | 1 cut(s) | 86 |
| EcoO109I | RGGNCCY | 1 cut(s) | 762 |
| EcoRII | CCWGG | 2 cut(s) | 669, 877 |
| EcoT14I | CCWWGG | 2 cut(s) | 564, 723 |
| EcoT38I | GRGCYC | 1 cut(s) | 88 |
| ErhI | CCWWGG | 2 cut(s) | 564, 723 |
| FaeI | CATG | 8 cut(s) | 472, 499, 551, 568, 655, 727, 800, 1096 |
| FaqI | GGGAC | 1 cut(s) | 324 |
| FatI | CATG | 8 cut(s) | 468, 495, 547, 564, 651, 723, 796, 1092 |
| FauI | CCCGC | 3 cut(s) | 145, 224, 859 |
| FbaI | TGATCA | 1 cut(s) | 595 |
| FblI | GTMKAC | 2 cut(s) | 426, 831 |
| FokI | GGATG | 3 cut(s) | 300, 470, 485 |
| FriOI | GRGCYC | 1 cut(s) | 88 |
| FspI | TGCGCA | 1 cut(s) | 854 |
| GlaI | GCGC | 6 cut(s) | 286, 342, 419, 441, 776, 854 |
| GsuI | CTGGAG | 1 cut(s) | 293 |
| HaeII | RGCGCY | 1 cut(s) | 443 |
| HaeIII | GGCC | 6 cut(s) | 141, 299, 715, 735, 931, 956 |
| HapII | CCGG | 4 cut(s) | 81, 186, 217, 371 |
| HgaI | GACGC | 2 cut(s) | 158, 376 |
| HhaI | GCGC | 6 cut(s) | 287, 343, 420, 442, 777, 855 |
| Hin1I | GRCGYC | 1 cut(s) | 368 |
| Hin1II | CATG | 8 cut(s) | 472, 499, 551, 568, 655, 727, 800, 1096 |
| Hin6I | GCGC | 6 cut(s) | 285, 341, 418, 440, 775, 853 |
| HinP1I | GCGC | 6 cut(s) | 285, 341, 418, 440, 775, 853 |
| HincII | GTYRAC | 2 cut(s) | 427, 832 |
| HindII | GTYRAC | 2 cut(s) | 427, 832 |
| HindIII | AAGCTT | 1 cut(s) | 610 |
| HinfI | GANTC | 1 cut(s) | 465 |
| HpaII | CCGG | 4 cut(s) | 81, 186, 217, 371 |
| HphI | GGTGA | 3 cut(s) | 5, 644, 1100 |
| Hpy166II | GTNNAC | 3 cut(s) | 427, 559, 832 |
| Hpy188I | TCNGA | 7 cut(s) | 90, 213, 446, 554, 658, 747, 1062 |
| Hpy188III | TCNNGA | 6 cut(s) | 35, 81, 146, 364, 496, 707 |
| Hpy8I | GTNNAC | 3 cut(s) | 427, 559, 832 |
| Hpy99I | CGWCG | 6 cut(s) | 152, 167, 170, 242, 370, 398 |
| HpyAV | CCTTC | 4 cut(s) | 64, 152, 535, 629 |
| HpyCH4IV | ACGT | 3 cut(s) | 92, 168, 345 |
| HpyCH4V | TGCA | 7 cut(s) | 204, 409, 541, 607, 967, 982, 1085 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 138, 201, 204, 325, 415, 446, 569, 578, 781 |
| HpySE526I | ACGT | 3 cut(s) | 92, 168, 345 |
| Hsp92I | GRCGYC | 1 cut(s) | 368 |
| Hsp92II | CATG | 8 cut(s) | 472, 499, 551, 568, 655, 727, 800, 1096 |
| HspAI | GCGC | 6 cut(s) | 285, 341, 418, 440, 775, 853 |
| Kpn2I | TCCGGA | 1 cut(s) | 80 |
| Ksp22I | TGATCA | 1 cut(s) | 595 |
| Kzo9I | GATC | 6 cut(s) | 208, 360, 376, 390, 595, 993 |
| LguI | GCTCTTC | 3 cut(s) | 185, 856, 1058 |
| LmnI | GCTCC | 4 cut(s) | 83, 447, 589, 772 |
| MabI | ACCWGGT | 1 cut(s) | 669 |
| MaeII | ACGT | 3 cut(s) | 92, 168, 345 |
| MaeIII | GTNAC | 2 cut(s) | 812, 1088 |
| MalI | GATC | 6 cut(s) | 210, 362, 378, 392, 597, 995 |
| MbiI | CCGCTC | 2 cut(s) | 76, 866 |
| MboI | GATC | 6 cut(s) | 208, 360, 376, 390, 595, 993 |
| MboII | GAAGA | 6 cut(s) | 202, 260, 275, 873, 959, 1075 |
| MhlI | GDGCHC | 1 cut(s) | 88 |
| MluCI | AATT | 3 cut(s) | 502, 846, 1027 |
| MlyI | GAGTC | 1 cut(s) | 474 |
| MmeI | TCCRAC | 2 cut(s) | 442, 770 |
| MroI | TCCGGA | 1 cut(s) | 80 |
| MseI | TTAA | 4 cut(s) | 614, 767, 899, 1011 |
| MspA1I | CMGCKG | 3 cut(s) | 138, 201, 319 |
| MspI | CCGG | 4 cut(s) | 81, 186, 217, 371 |
| MspR9I | CCNGG | 3 cut(s) | 187, 671, 879 |
| Mva1269I | GAATGC | 1 cut(s) | 919 |
| MvaI | CCWGG | 2 cut(s) | 671, 879 |
| MvnI | CGCG | 6 cut(s) | 59, 152, 287, 365, 420, 777 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 138, 201, 204, 325, 415, 446, 569, 578, 781 |
| NciI | CCSGG | 1 cut(s) | 187 |
| NcoI | CCATGG | 2 cut(s) | 564, 723 |
| NdeII | GATC | 6 cut(s) | 208, 360, 376, 390, 595, 993 |
| NlaIII | CATG | 8 cut(s) | 472, 499, 551, 568, 655, 727, 800, 1096 |
| NlaIV | GGNNCC | 1 cut(s) | 215 |
| NmeAIII | GCCGAG | 2 cut(s) | 411, 416 |
| NmuCI | GTSAC | 1 cut(s) | 1088 |
| NruI | TCGCGA | 1 cut(s) | 365 |
| NsbI | TGCGCA | 1 cut(s) | 854 |
| NspI | RCATGY | 1 cut(s) | 551 |
| PagI | TCATGA | 1 cut(s) | 495 |
| PaqCI | CACCTGC | 1 cut(s) | 1076 |
| PciSI | GCTCTTC | 3 cut(s) | 185, 856, 1058 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 402 |
| PctI | GAATGC | 1 cut(s) | 919 |
| PflFI | GACNNNGTC | 1 cut(s) | 170 |
| PfoI | TCCNGGA | 1 cut(s) | 185 |
| Ple19I | CGATCG | 1 cut(s) | 211 |
| PleI | GAGTC | 1 cut(s) | 473 |
| PmaCI | CACGTG | 1 cut(s) | 346 |
| PmlI | CACGTG | 1 cut(s) | 346 |
| PpsI | GAGTC | 1 cut(s) | 473 |
| Ppu21I | YACGTR | 1 cut(s) | 346 |
| PpuMI | RGGWCCY | 1 cut(s) | 762 |
| PshAI | GACNNNNGTC | 1 cut(s) | 371 |
| PshBI | ATTAAT | 1 cut(s) | 1011 |
| Psp124BI | GAGCTC | 1 cut(s) | 88 |
| Psp5II | RGGWCCY | 1 cut(s) | 762 |
| Psp6I | CCWGG | 2 cut(s) | 669, 877 |
| PspCI | CACGTG | 1 cut(s) | 346 |
| PspGI | CCWGG | 2 cut(s) | 669, 877 |
| PspN4I | GGNNCC | 1 cut(s) | 215 |
| PspPI | GGNCC | 4 cut(s) | 64, 713, 734, 762 |
| PspPPI | RGGWCCY | 1 cut(s) | 762 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 631, 663 |
| PstI | CTGCAG | 2 cut(s) | 206, 543 |
| PstNI | CAGNNNCTG | 3 cut(s) | 201, 604, 790 |
| PsyI | GACNNNGTC | 1 cut(s) | 170 |
| PvuI | CGATCG | 1 cut(s) | 211 |
| PvuII | CAGCTG | 1 cut(s) | 201 |
| RruI | TCGCGA | 1 cut(s) | 365 |
| RsaI | GTAC | 1 cut(s) | 236 |
| RsaNI | GTAC | 1 cut(s) | 235 |
| SacI | GAGCTC | 1 cut(s) | 88 |
| SalI | GTCGAC | 2 cut(s) | 425, 830 |
| SapI | GCTCTTC | 3 cut(s) | 185, 856, 1058 |
| SaqAI | TTAA | 4 cut(s) | 614, 767, 899, 1011 |
| Sau3AI | GATC | 6 cut(s) | 208, 360, 376, 390, 595, 993 |
| Sau96I | GGNCC | 4 cut(s) | 64, 713, 734, 762 |
| SchI | GAGTC | 1 cut(s) | 474 |
| ScrFI | CCNGG | 3 cut(s) | 187, 671, 879 |
| SduI | GDGCHC | 1 cut(s) | 88 |
| SexAI | ACCWGGT | 1 cut(s) | 669 |
| SfcI | CTRYAG | 2 cut(s) | 202, 539 |
| SinI | GGWCC | 2 cut(s) | 64, 762 |
| SmlI | CTYRAG | 1 cut(s) | 355 |
| SmoI | CTYRAG | 1 cut(s) | 355 |
| Sse9I | AATT | 3 cut(s) | 502, 846, 1027 |
| SstI | GAGCTC | 1 cut(s) | 88 |
| StyD4I | CCNGG | 3 cut(s) | 185, 669, 877 |
| StyI | CCWWGG | 2 cut(s) | 564, 723 |
| TaiI | ACGT | 3 cut(s) | 95, 171, 348 |
| TaqI | TCGA | 5 cut(s) | 375, 393, 426, 831, 1049 |
| TasI | AATT | 3 cut(s) | 502, 846, 1027 |
| TauI | GCSGC | 3 cut(s) | 73, 76, 141 |
| Tru1I | TTAA | 4 cut(s) | 614, 767, 899, 1011 |
| Tru9I | TTAA | 4 cut(s) | 614, 767, 899, 1011 |
| TscAI | CASTG | 1 cut(s) | 579 |
| TseFI | GTSAC | 1 cut(s) | 1088 |
| Tsp45I | GTSAC | 1 cut(s) | 1088 |
| TspDTI | ATGAA | 4 cut(s) | 484, 813, 1035, 1109 |
| TspGWI | ACGGA | 1 cut(s) | 1045 |
| TspRI | CASTG | 1 cut(s) | 579 |
| Tth111I | GACNNNGTC | 1 cut(s) | 170 |
| VpaK11BI | GGWCC | 2 cut(s) | 64, 762 |
| VspI | ATTAAT | 1 cut(s) | 1011 |
| XapI | RAATTY | 1 cut(s) | 846 |
| XceI | RCATGY | 1 cut(s) | 551 |
| XmiI | GTMKAC | 2 cut(s) | 426, 831 |