Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0006503

Physical Location & Seq

Genomic Coordinates Forward (+)

1576479 .. 1578892

Gene Structure 2414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG019700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGGCTTTTCACCACCACCAAACCCCTCACGAAATGGCCTTCCACGGCTCCTTTCCGGACACCCAACAACCCCCCCAGCTCGCCCCCACGTGGCTCAACGCGCCGCCGTTCCGCTCCCAGAACAGCTTCTCCCGGAACGACGACGTCGTCATATCGCCGTCCGGGAAGAGCGGAGATCGCGGCGGCGAAGAGGACGAGGAGGATGAACTGGAGTGCGAGAGCGGGAGGTTCAAAGCCGACATAGTAGGCCACCCTTTGTACGAACAGTTGGTCTCCGCACACGTGTCGTGCCTGAGGATCGCCACGCCGGTCGACCAGCTGCCCAAGATCGACGAGCAGCTCGTGCAGTCGCAGCGCGTGGTGGACAAGTACTCGGCGATGAGAGCCAACGGCGATTTCCAAGTTATGGATGAGAAAGAACTTGACTCGTTCATGACAAACTATGTTCTTTTGCTTTGTTCCTTCAAGGAACAACTGCAGCAACATGTTCGAGTTCATGCCATGGAGGCAGTCATGGCTTGTTGGGAGCTTGAGCAATCTCTACAAAGCTTAACAGGTGTATCAACGGCTGAGGGCACAGGGGCCACAATGTCCGATGATGATGAACAATTCGACAGTGACATTAACTCGTATGATGCGAGTCTAGATGGACATGACACCATGGGATTCGGTCCTCTCGTGCCAACTGAAAGTGAGAGATCTCTAATGGAGCGCGTAAGGCAAGAATTGAAGCATGAATTGAAACAGGGTTACAAGGAAAAGATTGTCGACATTCGTGAGGAAATTCTGCGTAAGAGAAGAGCAGGGAAACTTCCAGGTGACACCACTTCTGTGTTGAAAGCTTGGTGGCAATCACATTCCAAATGGCCTTACCCAACTGAGGAAGACAAAGCGAGGCTAGTGCAGGAAACAGGGTTGCAATTGAAGCAGATCAATAACTGGTTTATCAATCAAAGAAAAAGGAACTGGCACAGCAACCTCTCCACAACTTCTGTTTTGAAGAGCAAGCGCAAGAGTAATGCAGGTGATGGCAACACTCAACAATTCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009593 GO:0009628 GO:0009719 GO:0009720 GO:0009722 GO:0009725 GO:0009726 GO:0009735 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0034097 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071345 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04550 ko05202 map04550 map05202

Pfam Domains

Protein Families

ELK Homeobox_KN KNOX1 KNOX2

Protein Analysis

350

Amino Acids

39.88

Weight (kDa)

5.42

Isoelectric Point (pI)

48.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KNOX1	PF03790	77 - 117	3e-17	KNOX1 domain
KNOX2	PF03791	135 - 185	5e-16	KNOX2 domain
ELK	PF03789	242 - 263	5.8e-07	ELK domain
Homeobox_KN	PF05920	282 - 321	7.2e-19	Homeobox KN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32040 AT4G32040
fragaria_vesca	FvH4_1g01720 FvH4_1g01720 FvH4_1g01720
malus_domestica	MD02G1012900.v1.1 MD15G1159800.v1.1
prunus_persica	Prupe.7G254700_v2.0.a1 Prupe.7G254700_v2.0.a1
pyrus_communis	pycom02g01200 pycom06g06940 pycom15g14350 pycom15g14360
rosa_chinensis	RchiOBHm_Chr2g0086661
rosa_laevigata	RLG00000015771
rosa_multiflora	Rmu_co8121786.1_g000001 Rmu_co8238721.1_g000001 Rmu_sc0002376.1_g000005
rosa_roxburghii	Rroxscaffold_2G00154340
rosa_rugosa	Rorug01G0468200 Rorug01G0468200
rosa_samantha	Rh2AG020200 Rh2BG020100 Rh2CG019700 Rh2DG020600
rosa_wichuraiana	Rw2G001660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1013
AasI	GACNNNNNNGTC	1 cut(s)	146
AatII	GACGTC	1 cut(s)	147
Acc36I	ACCTGC	1 cut(s)	1013
AccB7I	CCANNNNNTGG	1 cut(s)	406
AccBSI	CCGCTC	3 cut(s)	114, 171, 222
AccI	GTMKAC	2 cut(s)	312, 768
AccII	CGCG	4 cut(s)	101, 180, 357, 714
AccIII	TCCGGA	1 cut(s)	55
AciI	CCGC	7 cut(s)	104, 112, 171, 180, 183, 222, 276
AclWI	GGATC	1 cut(s)	305
AcsI	RAATTY	1 cut(s)	783
AcvI	CACGTG	2 cut(s)	90, 283
AcyI	GRCGYC	1 cut(s)	144
AfaI	GTAC	2 cut(s)	260, 371
AfiI	CCNNNNNNNGG	3 cut(s)	90, 406, 880
AflIII	ACRYGT	3 cut(s)	280, 282, 484
AgsI	TTSAA	8 cut(s)	232, 466, 730, 742, 838, 925, 1000, 1048
AjnI	CCWGG	1 cut(s)	814
AjuI	GAANNNNNNNTTGG	2 cut(s)	380, 412
AleI	CACNNNNGTG	1 cut(s)	830
AloI	GAACNNNNNNTCC	2 cut(s)	113, 145
AluBI	AGCT	7 cut(s)	79, 126, 319, 340, 529, 549, 842
AluI	AGCT	7 cut(s)	79, 126, 319, 340, 529, 549, 842
Alw26I	GTCTC	1 cut(s)	277
AlwI	GGATC	1 cut(s)	305
Aor13HI	TCCGGA	1 cut(s)	55
AoxI	GGCC	4 cut(s)	36, 247, 582, 866
ApeKI	GCWGC	4 cut(s)	319, 337, 352, 478
ApoI	RAATTY	1 cut(s)	783
ArsI	GACNNNNNNTTYG	2 cut(s)	255, 287
Asp700I	GAANNNNTTC	1 cut(s)	125
AspLEI	GCGC	4 cut(s)	103, 357, 714, 1011
AspS9I	GGNCC	2 cut(s)	582, 671
AsuC2I	CCSGG	2 cut(s)	133, 163
AsuHPI	GGTGA	2 cut(s)	830, 1037
AvaII	GGWCC	1 cut(s)	671
AxyI	CCTNAGG	1 cut(s)	293
BaeGI	GKGCMC	1 cut(s)	578
BaeI	ACNNNNGTAYC	2 cut(s)	543, 576
BauI	CACGAG	2 cut(s)	341, 677
BbrPI	CACGTG	2 cut(s)	90, 283
BbsI	GAAGAC	1 cut(s)	891
BbvCI	CCTCAGC	1 cut(s)	570
BbvI	GCAGC	4 cut(s)	306, 349, 364, 490
BccI	CCATC	2 cut(s)	641, 1022
BceAI	ACGGC	5 cut(s)	61, 91, 142, 406, 582
BcgI	CGANNNNNNTGC	6 cut(s)	267, 301, 470, 504, 883, 917
BciT130I	CCWGG	1 cut(s)	816
BcnI	CCSGG	2 cut(s)	133, 163
BcoDI	GTCTC	1 cut(s)	277
BfaI	CTAG	2 cut(s)	644, 899
BfmI	CTRYAG	1 cut(s)	476
BfuAI	ACCTGC	1 cut(s)	1013
BglI	GCCNNNNNGGC	1 cut(s)	506
BglII	AGATCT	1 cut(s)	698
BisI	GCNGC	7 cut(s)	104, 181, 184, 320, 338, 353, 479
BlsI	GCNGC	7 cut(s)	105, 182, 185, 321, 339, 354, 480
BmcAI	AGTACT	1 cut(s)	371
Bme1390I	CCNGG	3 cut(s)	133, 163, 816
Bme18I	GGWCC	1 cut(s)	671
BmgT120I	GGNCC	2 cut(s)	582, 671
BmiI	GGNNCC	2 cut(s)	49, 583
BmrFI	CCNGG	3 cut(s)	133, 163, 816
BmsI	GCATC	1 cut(s)	625
BpiI	GAAGAC	1 cut(s)	891
BpmI	CTGGAG	1 cut(s)	230
Bpu10I	CCTNAGC	1 cut(s)	570
BpuEI	CTTGAG	1 cut(s)	551
BpuMI	CCSGG	2 cut(s)	133, 163
BsaAI	YACGTR	2 cut(s)	90, 283
BsaHI	GRCGYC	1 cut(s)	144
BsaI	GGTCTC	1 cut(s)	277
BsaJI	CCNNGG	3 cut(s)	43, 501, 660
BsaWI	WCCGGW	1 cut(s)	55
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bsc4I	CCNNNNNNNGG	3 cut(s)	90, 406, 880
Bse118I	RCCGGY	1 cut(s)	307
Bse1I	ACTGG	3 cut(s)	213, 944, 971
Bse21I	CCTNAGG	1 cut(s)	293
BseAI	TCCGGA	1 cut(s)	55
BseBI	CCWGG	1 cut(s)	816
BseDI	CCNNGG	3 cut(s)	43, 501, 660
BseGI	GGATG	2 cut(s)	208, 415
BseLI	CCNNNNNNNGG	3 cut(s)	90, 406, 880
BseMII	CTCAG	3 cut(s)	284, 561, 870
BseNI	ACTGG	3 cut(s)	213, 944, 971
BseRI	GAGGAG	1 cut(s)	212
BseSI	GKGCMC	1 cut(s)	578
BseXI	GCAGC	4 cut(s)	306, 349, 364, 490
BseYI	CCCAGC	1 cut(s)	75
BsgI	GTGCAG	2 cut(s)	365, 923
Bsh1236I	CGCG	4 cut(s)	101, 180, 357, 714
Bsh1285I	CGRYCG	1 cut(s)	312
BshFI	GGCC	4 cut(s)	38, 249, 584, 868
BsiEI	CGRYCG	1 cut(s)	312
BsiSI	CCGG	4 cut(s)	56, 133, 162, 308
BslI	CCNNNNNNNGG	3 cut(s)	90, 406, 880
BsmAI	GTCTC	1 cut(s)	277
BsnI	GGCC	4 cut(s)	38, 249, 584, 868
Bso31I	GGTCTC	1 cut(s)	277
Bsp1286I	GDGCHC	1 cut(s)	578
Bsp13I	TCCGGA	1 cut(s)	55
Bsp143I	GATC	5 cut(s)	175, 297, 327, 698, 930
Bsp19I	CCATGG	2 cut(s)	501, 660
BspACI	CCGC	7 cut(s)	104, 112, 171, 180, 183, 222, 276
BspANI	GGCC	4 cut(s)	38, 249, 584, 868
BspCNI	CTCAG	3 cut(s)	285, 562, 871
BspEI	TCCGGA	1 cut(s)	55
BspFNI	CGCG	4 cut(s)	101, 180, 357, 714
BspHI	TCATGA	1 cut(s)	432
BspLI	GGNNCC	2 cut(s)	49, 583
BspMAI	CTGCAG	1 cut(s)	480
BspMI	ACCTGC	1 cut(s)	1013
BspPI	GGATC	1 cut(s)	305
BspQI	GCTCTTC	3 cut(s)	161, 793, 995
BspTNI	GGTCTC	1 cut(s)	277
BsrBI	CCGCTC	3 cut(s)	114, 171, 222
BsrFI	RCCGGY	1 cut(s)	307
BsrI	ACTGG	3 cut(s)	213, 944, 971
BssAI	RCCGGY	1 cut(s)	307
BssECI	CCNNGG	3 cut(s)	43, 501, 660
BssMI	GATC	5 cut(s)	175, 297, 327, 698, 930
BssNI	GRCGYC	1 cut(s)	144
BssSI	CACGAG	2 cut(s)	341, 677
BssT1I	CCWWGG	2 cut(s)	501, 660
Bst2BI	CACGAG	2 cut(s)	341, 677
Bst2UI	CCWGG	1 cut(s)	816
Bst4CI	ACNGT	2 cut(s)	267, 617
Bst6I	CTCTTC	4 cut(s)	161, 183, 793, 995
BstACI	GRCGYC	1 cut(s)	144
BstAPI	GCANNNNNTGC	1 cut(s)	343
BstBAI	YACGTR	2 cut(s)	90, 283
BstC8I	GCNNGC	2 cut(s)	81, 1007
BstDEI	CTNAG	3 cut(s)	293, 570, 879
BstDSI	CCRYGG	3 cut(s)	43, 501, 660
BstF5I	GGATG	2 cut(s)	208, 415
BstFNI	CGCG	4 cut(s)	101, 180, 357, 714
BstHHI	GCGC	4 cut(s)	103, 357, 714, 1011
BstKTI	GATC	5 cut(s)	178, 300, 330, 701, 933
BstMAI	GTCTC	1 cut(s)	277
BstMBI	GATC	5 cut(s)	175, 297, 327, 698, 930
BstMCI	CGRYCG	1 cut(s)	312
BstMWI	GCNNNNNNNGC	9 cut(s)	100, 177, 343, 352, 383, 506, 515, 718, 925
BstNI	CCWGG	1 cut(s)	816
BstNSI	RCATGY	1 cut(s)	488
BstSCI	CCNGG	3 cut(s)	131, 161, 814
BstSFI	CTRYAG	1 cut(s)	476
BstSLI	GKGCMC	1 cut(s)	578
BstUI	CGCG	4 cut(s)	101, 180, 357, 714
BstV1I	GCAGC	4 cut(s)	306, 349, 364, 490
BstV2I	GAAGAC	1 cut(s)	891
BstX2I	RGATCY	1 cut(s)	698
BstYI	RGATCY	1 cut(s)	698
Bsu36I	CCTNAGG	1 cut(s)	293
BsuRI	GGCC	4 cut(s)	38, 249, 584, 868
BtgI	CCRYGG	3 cut(s)	43, 501, 660
BtgZI	GCGATG	1 cut(s)	392
BtsCI	GGATG	2 cut(s)	208, 415
BtsIMutI	CAGTG	1 cut(s)	622
BveI	ACCTGC	1 cut(s)	1013
Cac8I	GCNNGC	2 cut(s)	81, 1007
CciI	TCATGA	1 cut(s)	432
CfoI	GCGC	4 cut(s)	103, 357, 714, 1011
Cfr10I	RCCGGY	1 cut(s)	307
Cfr13I	GGNCC	2 cut(s)	582, 671
Csp6I	GTAC	2 cut(s)	259, 370
CviAII	CATG	8 cut(s)	433, 485, 497, 502, 514, 653, 661, 734
CviQI	GTAC	2 cut(s)	259, 370
DdeI	CTNAG	3 cut(s)	293, 570, 879
DpnI	GATC	5 cut(s)	177, 299, 329, 700, 932
DpnII	GATC	5 cut(s)	175, 297, 327, 698, 930
DrdI	GACNNNNNNGTC	1 cut(s)	146
DseDI	GACNNNNNNGTC	1 cut(s)	146
Eam1104I	CTCTTC	4 cut(s)	161, 183, 793, 995
EarI	CTCTTC	4 cut(s)	161, 183, 793, 995
Eco130I	CCWWGG	2 cut(s)	501, 660
Eco31I	GGTCTC	1 cut(s)	277
Eco47I	GGWCC	1 cut(s)	671
Eco72I	CACGTG	2 cut(s)	90, 283
Eco81I	CCTNAGG	1 cut(s)	293
EcoRII	CCWGG	1 cut(s)	814
EcoT14I	CCWWGG	2 cut(s)	501, 660
ErhI	CCWWGG	2 cut(s)	501, 660
FaeI	CATG	8 cut(s)	436, 488, 500, 505, 517, 656, 664, 737
FatI	CATG	8 cut(s)	432, 484, 496, 501, 513, 652, 660, 733
FauI	CCCGC	1 cut(s)	215
FblI	GTMKAC	2 cut(s)	312, 768
Fnu4HI	GCNGC	7 cut(s)	104, 181, 184, 320, 338, 353, 479
FokI	GGATG	2 cut(s)	215, 422
Fsp4HI	GCNGC	7 cut(s)	104, 181, 184, 320, 338, 353, 479
FspBI	CTAG	2 cut(s)	644, 899
GlaI	GCGC	4 cut(s)	102, 356, 713, 1010
GluI	GCNGC	7 cut(s)	104, 181, 184, 320, 338, 353, 479
GsaI	CCCAGC	1 cut(s)	79
GsuI	CTGGAG	1 cut(s)	230
HaeIII	GGCC	4 cut(s)	38, 249, 584, 868
HapII	CCGG	4 cut(s)	56, 133, 162, 308
HhaI	GCGC	4 cut(s)	103, 357, 714, 1011
Hin1I	GRCGYC	1 cut(s)	144
Hin1II	CATG	8 cut(s)	436, 488, 500, 505, 517, 656, 664, 737
Hin6I	GCGC	4 cut(s)	101, 355, 712, 1009
HinP1I	GCGC	4 cut(s)	101, 355, 712, 1009
HincII	GTYRAC	2 cut(s)	313, 769
HindII	GTYRAC	2 cut(s)	313, 769
HindIII	AAGCTT	2 cut(s)	547, 840
HinfI	GANTC	3 cut(s)	425, 640, 666
HpaII	CCGG	4 cut(s)	56, 133, 162, 308
HphI	GGTGA	2 cut(s)	830, 1037
Hpy166II	GTNNAC	3 cut(s)	313, 364, 769
Hpy188I	TCNGA	1 cut(s)	595
Hpy188III	TCNNGA	5 cut(s)	29, 56, 433, 644, 776
Hpy8I	GTNNAC	3 cut(s)	313, 364, 769
Hpy99I	CGWCG	4 cut(s)	143, 146, 149, 335
HpyAV	CCTTC	2 cut(s)	49, 472
HpyCH4III	ACNGT	2 cut(s)	267, 617
HpyCH4IV	ACGT	3 cut(s)	89, 144, 282
HpyCH4V	TGCA	5 cut(s)	346, 478, 904, 919, 1022
HpyF10VI	GCNNNNNNNGC	9 cut(s)	100, 177, 343, 352, 383, 506, 515, 718, 925
HpyF3I	CTNAG	3 cut(s)	293, 570, 879
HpySE526I	ACGT	3 cut(s)	89, 144, 282
Hsp92I	GRCGYC	1 cut(s)	144
Hsp92II	CATG	8 cut(s)	436, 488, 500, 505, 517, 656, 664, 737
HspAI	GCGC	4 cut(s)	101, 355, 712, 1009
Kpn2I	TCCGGA	1 cut(s)	55
Kzo9I	GATC	5 cut(s)	175, 297, 327, 698, 930
LguI	GCTCTTC	3 cut(s)	161, 793, 995
LmnI	GCTCC	4 cut(s)	53, 119, 526, 709
Lsp1109I	GCAGC	4 cut(s)	306, 349, 364, 490
LweI	GCATC	1 cut(s)	625
MaeI	CTAG	2 cut(s)	644, 899
MaeII	ACGT	3 cut(s)	89, 144, 282
MaeIII	GTNAC	3 cut(s)	617, 749, 818
MalI	GATC	5 cut(s)	177, 299, 329, 700, 932
MbiI	CCGCTC	3 cut(s)	114, 171, 222
MboI	GATC	5 cut(s)	175, 297, 327, 698, 930
MboII	GAAGA	5 cut(s)	178, 200, 810, 896, 1012
MfeI	CAATTG	1 cut(s)	920
MflI	RGATCY	1 cut(s)	698
MhlI	GDGCHC	1 cut(s)	578
MluCI	AATT	6 cut(s)	608, 725, 737, 783, 920, 1043
MlyI	GAGTC	2 cut(s)	419, 649
MroI	TCCGGA	1 cut(s)	55
MroXI	GAANNNNTTC	1 cut(s)	125
MseI	TTAA	2 cut(s)	551, 624
MslI	CAYNNNNRTG	1 cut(s)	830
MspA1I	CMGCKG	1 cut(s)	319
MspI	CCGG	4 cut(s)	56, 133, 162, 308
MspR9I	CCNGG	3 cut(s)	133, 163, 816
MunI	CAATTG	1 cut(s)	920
MvaI	CCWGG	1 cut(s)	816
MvnI	CGCG	4 cut(s)	101, 180, 357, 714
MwoI	GCNNNNNNNGC	9 cut(s)	100, 177, 343, 352, 383, 506, 515, 718, 925
NciI	CCSGG	2 cut(s)	133, 163
NcoI	CCATGG	2 cut(s)	501, 660
NdeII	GATC	5 cut(s)	175, 297, 327, 698, 930
NlaIII	CATG	8 cut(s)	436, 488, 500, 505, 517, 656, 664, 737
NlaIV	GGNNCC	2 cut(s)	49, 583
NmeAIII	GCCGAG	1 cut(s)	353
NmuCI	GTSAC	2 cut(s)	617, 818
NspI	RCATGY	1 cut(s)	488
OliI	CACNNNNGTG	1 cut(s)	830
PagI	TCATGA	1 cut(s)	432
PaqCI	CACCTGC	1 cut(s)	1013
PciI	ACATGT	1 cut(s)	484
PciSI	GCTCTTC	3 cut(s)	161, 793, 995
PcsI	WCGNNNNNNNCGW	4 cut(s)	144, 339, 635, 675
PdmI	GAANNNNTTC	1 cut(s)	125
PfeI	GAWTC	1 cut(s)	666
PflFI	GACNNNGTC	2 cut(s)	143, 146
PflMI	CCANNNNNTGG	1 cut(s)	406
PfoI	TCCNGGA	2 cut(s)	131, 161
PkrI	GCNGC	7 cut(s)	105, 182, 185, 321, 339, 354, 480
PleI	GAGTC	2 cut(s)	419, 648
PmaCI	CACGTG	2 cut(s)	90, 283
PmlI	CACGTG	2 cut(s)	90, 283
PpsI	GAGTC	2 cut(s)	419, 648
Ppu21I	YACGTR	2 cut(s)	90, 283
PscI	ACATGT	1 cut(s)	484
Psp6I	CCWGG	1 cut(s)	814
PspCI	CACGTG	2 cut(s)	90, 283
PspFI	CCCAGC	1 cut(s)	75
PspGI	CCWGG	1 cut(s)	814
PspN4I	GGNNCC	2 cut(s)	49, 583
PspPI	GGNCC	2 cut(s)	582, 671
PstI	CTGCAG	1 cut(s)	480
PsuI	RGATCY	1 cut(s)	698
PsyI	GACNNNGTC	2 cut(s)	143, 146
PvuII	CAGCTG	1 cut(s)	319
RsaI	GTAC	2 cut(s)	260, 371
RsaNI	GTAC	2 cut(s)	259, 370
RseI	CAYNNNNRTG	1 cut(s)	830
SalI	GTCGAC	2 cut(s)	311, 767
SapI	GCTCTTC	3 cut(s)	161, 793, 995
SaqAI	TTAA	2 cut(s)	551, 624
SatI	GCNGC	7 cut(s)	104, 181, 184, 320, 338, 353, 479
Sau3AI	GATC	5 cut(s)	175, 297, 327, 698, 930
Sau96I	GGNCC	2 cut(s)	582, 671
ScaI	AGTACT	1 cut(s)	371
SchI	GAGTC	2 cut(s)	419, 649
ScrFI	CCNGG	3 cut(s)	133, 163, 816
SduI	GDGCHC	1 cut(s)	578
SfaNI	GCATC	1 cut(s)	625
SfcI	CTRYAG	1 cut(s)	476
SinI	GGWCC	1 cut(s)	671
SmiMI	CAYNNNNRTG	1 cut(s)	830
SmlI	CTYRAG	1 cut(s)	530
SmoI	CTYRAG	1 cut(s)	530
Sse9I	AATT	6 cut(s)	608, 725, 737, 783, 920, 1043
SsiI	CCGC	7 cut(s)	104, 112, 171, 180, 183, 222, 276
SspMI	CTAG	2 cut(s)	644, 899
StyD4I	CCNGG	3 cut(s)	131, 161, 814
StyI	CCWWGG	2 cut(s)	501, 660
TaaI	ACNGT	2 cut(s)	267, 617
TaiI	ACGT	3 cut(s)	92, 147, 285
TaqI	TCGA	5 cut(s)	312, 330, 490, 612, 768
TaqII	GACCGA	1 cut(s)	659
TasI	AATT	6 cut(s)	608, 725, 737, 783, 920, 1043
TatI	WGTACW	1 cut(s)	369
TauI	GCSGC	3 cut(s)	106, 183, 186
TfiI	GAWTC	1 cut(s)	666
Tru1I	TTAA	2 cut(s)	551, 624
Tru9I	TTAA	2 cut(s)	551, 624
TscAI	CASTG	1 cut(s)	622
TseFI	GTSAC	2 cut(s)	617, 818
TseI	GCWGC	4 cut(s)	319, 337, 352, 478
Tsp45I	GTSAC	2 cut(s)	617, 818
TspDTI	ATGAA	5 cut(s)	219, 421, 485, 618, 750
TspRI	CASTG	1 cut(s)	622
Tth111I	GACNNNGTC	2 cut(s)	143, 146
Van91I	CCANNNNNTGG	1 cut(s)	406
VpaK11BI	GGWCC	1 cut(s)	671
XapI	RAATTY	1 cut(s)	783
XbaI	TCTAGA	1 cut(s)	643
XceI	RCATGY	1 cut(s)	488
XmiI	GTMKAC	2 cut(s)	312, 768
XmnI	GAANNNNTTC	1 cut(s)	125
XspI	CTAG	2 cut(s)	644, 899
ZraI	GACGTC	1 cut(s)	145
ZrmI	AGTACT	1 cut(s)	371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.