pycom02g12480

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0006338
Physical Location & Seq
Reverse (-)
9069369 .. 9071779
2411 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2073 bp
ATGGCAGCATCAGCGGCGGCGACGGCCACGGCGGCAGCTGAGAAATCAAGCTCCAAAGGCCAAGCATGGTTCTGCACCACTGGATTACCAAGCGACATTGTCGTCGAAGTCGACGACATGACCTTCCATCTCCACAAGTTCCCTCTGATGTCGAAAAGTCAAAAGCTTCACAACCTGATCACAGAGCAAGAGGCGAACCCATCAAACCCCCACCAGCAAGTTGATAACGACGTAGACGACGAAATCGAAGAAGTCCAGTGCCAAATATCCCTCTCGGACTTCCCCGGCGGTTCCGAGACCTTCGAGATCGCCGCCAAGTTCTGCTACGGCGTCAAGATCGACCTGAGCTCCTCCAACGTCGTGCCGTTACGTTGCGCCGGAGAGTATTTGGAGATGACGGAGGAGTACTCGGAGGACAACCTTATTTCGAAAACTGAGAGGTTTCTTACTCAGTCGGTGCTGAAAAGTTTCAAGGAGTCGCTCAGAGCTCTCAAGTCCTGCGAGCGAGTGGCGCCTCTGGCGGAGAAATTGGGGATAACGCAGAGGTGCATAGACTCCGTCGCTTCCCGCGCCACGTCCGCCGATCCCACCCTGTTTGGCTGGCCGGTTGGTGACGGGGGACCCAATCGGAATACTAATGCCGATACTGTTTCGGCTTCTTCTGCTTCCAAACAGCAGATTTTATGGAATGGGATCGACGCGGGCGGCGGACGGAGAAGATCCAAACACGCGGATTCATGGCTTGAAGACTTGGTCGTTCTGAGCTTGCCTCTCTTCAAGCGGTTGATTTCCGCCATGAAATCTGGAGATCTGAGCTTGGAGATGGTGGAGACGTGCTTGATGCATTATGCTAAGAAGTACATTCCTGGAATTTCGAGAACGAATCGAAAGCCTTCGTCTTCTTCCTCAGGCGTCGCCGCCGCCACTACCGCCGCCGCATCATCGGGTTTAGCTTCGGAGAGTCAGCAGAGAGAACTTTTGGAGACCATCATCTCCAATCTTCCATTGGAGAAGAGCTCCAGACCTTCGACCGCGACTCGATTCCTCTTCGGGCTTTTGCGAACCGCCAACATACTCAACGCCTCCGATGCCTGCAAGGCTGCCTTGGAGAAGAAGATCGCGTTGCAGCTCCACCAAGCCACCTTAGACGACCTTCTCATCCCGAGCTATTCCTACCTGAACGAGACGCTCTACGACGTCGATTGCATCGAGCGGATCCTCGGCTACTTCTTGAACGACTTGGATCAGGGAAACACCGCCGGAATCGAAGACGACGACGGTTCTGGCGGCGCAGTCCGATCTCCGTCGCTGATGCTCGTCGGAAAACTGATCGACGAGTTTCTCTCCGAGATCGCCTCCGATGCGAATCTCAAACCGGATCGGTTCTACAATCTCGCGATTTCTTTGCCTGATCAAGCTCGGCTCTTCGACGACGGTCTCTACAGAGCCGTCGATGTTTATCTCAAGGCTCATCCATCGCTATCGGAACCTGAGCGCGAGAAGGTCTGCGGTATTCTGGACTGCCAGAAGCTGACGCTGGAGGCGTGCACGCACGCGGCGCAGAACGAGCGATTGCCGCTGCGCGCGGTGGTGCAGGTTCTGTTCTTTGAGCAGCTCCAGCTCCGTCACGCAATCGCCGGAACTCTTCTCGCCGCCGATGTCTCTCCGCCGGAGTCGGCCAGGCCGTCGGTGCTGCGACGCGAGCCAGAGGATGAGGAGGAAGAAGACGATGATGACGCGGCGGAGGCACGCGGGGAGGAAGAGGAGAATAGAGTGGCACGTGCGGAGGAAAGTGGCGGCACGTGGCGGGCGGCGGTGAGGGAGAATCAGGTGTTGCGGTTGGACATGGATAGCATGAGGACGCGGGTGCACCAACTAGAGCGGGAATGCTCCAGCATGAAAAAGGTAATCGAGAAGATTGATAAGTCGGGTCAACCCGGGATAGACGGTTCGGGTTGGAAAAAGTCGTTGACCCGGAGGTTCGGGTGCAAGTTCAAGACCCAGGTGTGCGATTCGCACGAACCTACGGTCGTCGATACGAGAAAAGGACGGCGACACCATCACCAACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

691

Amino Acids

75.9

Weight (kDa)

5.22

Isoelectric Point (pI)

50.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 245 - 516 2.2e-88 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 101
AatII GACGTC 1 cut(s) 1200
Acc36I ACCTGC 1 cut(s) 1585
AccB1I GGYRCC 1 cut(s) 511
AccBSI CCGCTC 2 cut(s) 1213, 1882
AccI GTMKAC 2 cut(s) 111, 234
AclWI GGATC 7 cut(s) 578, 701, 714, 1210, 1223, 1251, 1386
AcoI YGGCCR 3 cut(s) 24, 602, 1677
AcsI RAATTY 1 cut(s) 870
AcvI CACGTG 2 cut(s) 1781, 1803
AcyI GRCGYC 4 cut(s) 330, 512, 912, 1197
AfaI GTAC 2 cut(s) 407, 860
AgsI TTSAA 5 cut(s) 472, 746, 778, 1234, 1996
AjiI CACGTC 2 cut(s) 576, 834
AjnI CCWGG 3 cut(s) 865, 1679, 2001
AloI GAACNNNNNNTCC 2 cut(s) 1933, 1965
Alw21I GWGCWC 5 cut(s) 350, 490, 1019, 1550, 1872
Alw26I GTCTC 6 cut(s) 290, 824, 977, 1178, 1442, 1666
Alw44I GTGCAC 2 cut(s) 1546, 1868
AlwI GGATC 7 cut(s) 578, 701, 714, 1210, 1223, 1251, 1386
AlwNI CAGNNNCTG 2 cut(s) 1531, 1600
Ama87I CYCGRG 2 cut(s) 1162, 1937
AoxI GGCC 5 cut(s) 24, 58, 602, 1677, 1682
ApaLI GTGCAC 2 cut(s) 1546, 1868
ApeKI GCWGC 7 cut(s) 5, 35, 1100, 1126, 1579, 1612, 1693
ApoI RAATTY 1 cut(s) 870
ArsI GACNNNNNNTTYG 2 cut(s) 2013, 2045
Asp700I GAANNNNTTC 2 cut(s) 467, 892
AspLEI GCGC 8 cut(s) 377, 514, 572, 1292, 1497, 1561, 1584, 1586
AspS9I GGNCC 1 cut(s) 620
AsuC2I CCSGG 4 cut(s) 285, 1938, 1939, 1975
AsuHPI GGTGA 3 cut(s) 623, 1828, 2054
AsuII TTCGAA 1 cut(s) 428
AvaI CYCGRG 2 cut(s) 1162, 1937
AvaII GGWCC 1 cut(s) 620
AxyI CCTNAGG 1 cut(s) 907
BaeGI GKGCMC 2 cut(s) 1550, 1872
BamHI GGATCC 1 cut(s) 1215
BanI GGYRCC 1 cut(s) 511
BanII GRGCYC 3 cut(s) 350, 490, 1019
BbrPI CACGTG 2 cut(s) 1781, 1803
BbsI GAAGAC 4 cut(s) 753, 891, 1275, 1731
Bbv12I GWGCWC 5 cut(s) 350, 490, 1019, 1550, 1872
BbvI GCAGC 7 cut(s) 17, 47, 1087, 1138, 1566, 1624, 1680
BccI CCATC 6 cut(s) 135, 208, 817, 995, 1483, 2067
BceAI ACGGC 7 cut(s) 39, 45, 343, 349, 1433, 1669, 2066
BcgI CGANNNNNNTGC 2 cut(s) 1387, 1421
BciT130I CCWGG 3 cut(s) 867, 1681, 2003
BclI TGATCA 2 cut(s) 177, 1411
BcnI CCSGG 4 cut(s) 285, 1938, 1939, 1975
BcoDI GTCTC 6 cut(s) 290, 824, 977, 1178, 1442, 1666
BfaI CTAG 1 cut(s) 1877
BfmI CTRYAG 1 cut(s) 1441
BfoI RGCGCY 1 cut(s) 515
BfuAI ACCTGC 1 cut(s) 1585
BglI GCCNNNNNGGC 2 cut(s) 32, 1097
BglII AGATCT 1 cut(s) 808
BmcAI AGTACT 1 cut(s) 407
Bme1390I CCNGG 7 cut(s) 285, 867, 1681, 1938, 1939, 1975, 2003
Bme18I GGWCC 1 cut(s) 620
BmeT110I CYCGRG 2 cut(s) 1162, 1937
BmgBI CACGTC 2 cut(s) 576, 834
BmgT120I GGNCC 1 cut(s) 620
BmiI GGNNCC 6 cut(s) 292, 513, 621, 622, 1217, 1488
BmrFI CCNGG 7 cut(s) 285, 867, 1681, 1938, 1939, 1975, 2003
BmsI GCATC 7 cut(s) 17, 831, 947, 1078, 1215, 1302, 1351
BoxI GACNNNNGTC 1 cut(s) 1434
BpiI GAAGAC 4 cut(s) 753, 891, 1275, 1731
BpmI CTGGAG 5 cut(s) 825, 1003, 1559, 1601, 1876
Bpu10I CCTNAGC 2 cut(s) 344, 1491
Bpu14I TTCGAA 1 cut(s) 428
BpuEI CTTGAG 2 cut(s) 476, 1448
BpuMI CCSGG 4 cut(s) 285, 1938, 1939, 1975
BsaAI YACGTR 2 cut(s) 1781, 1803
BsaBI GATNNNNATC 2 cut(s) 1365, 1458
BsaHI GRCGYC 4 cut(s) 330, 512, 912, 1197
BsaI GGTCTC 3 cut(s) 290, 977, 1442
BsaJI CCNNGG 6 cut(s) 27, 283, 1104, 1219, 1937, 2001
BsaWI WCCGGW 1 cut(s) 1375
BsaXI ACNNNNNCTCC 2 cut(s) 332, 362
Bse118I RCCGGY 1 cut(s) 604
Bse1I ACTGG 2 cut(s) 85, 256
Bse21I CCTNAGG 1 cut(s) 907
Bse8I GATNNNNATC 2 cut(s) 1365, 1458
BseBI CCWGG 3 cut(s) 867, 1681, 2003
BseDI CCNNGG 6 cut(s) 27, 283, 1104, 1219, 1937, 2001
BseGI GGATG 3 cut(s) 1158, 1471, 1717
BseJI GATNNNNATC 2 cut(s) 1365, 1458
BseMII CTCAG 9 cut(s) 30, 335, 426, 464, 496, 752, 803, 921, 1482
BseNI ACTGG 2 cut(s) 85, 256
BsePI GCGCGC 1 cut(s) 1582
BseRI GAGGAG 4 cut(s) 340, 416, 1730, 1778
BseSI GKGCMC 2 cut(s) 1550, 1872
BseXI GCAGC 7 cut(s) 17, 47, 1087, 1138, 1566, 1624, 1680
BsgI GTGCAG 2 cut(s) 58, 1613
Bsh1285I CGRYCG 2 cut(s) 1032, 2031
BshFI GGCC 5 cut(s) 26, 60, 604, 1679, 1684
BshNI GGYRCC 1 cut(s) 511
BsiEI CGRYCG 2 cut(s) 1032, 2031
BsiHKAI GWGCWC 5 cut(s) 350, 490, 1019, 1550, 1872
BsiHKCI CYCGRG 2 cut(s) 1162, 1937
BsiSI CCGG 9 cut(s) 285, 378, 605, 1260, 1376, 1638, 1670, 1938, 1975
BslFI GGGAC 1 cut(s) 633
BsmAI GTCTC 6 cut(s) 290, 824, 977, 1178, 1442, 1666
BsmBI CGTCTC 2 cut(s) 824, 1178
BsmFI GGGAC 1 cut(s) 633
BsmI GAATGC 1 cut(s) 1892
BsnI GGCC 5 cut(s) 26, 60, 604, 1679, 1684
Bso31I GGTCTC 3 cut(s) 290, 977, 1442
BsoBI CYCGRG 2 cut(s) 1162, 1937
Bsp119I TTCGAA 1 cut(s) 428
Bsp1286I GDGCHC 5 cut(s) 350, 490, 1019, 1550, 1872
Bsp68I TCGCGA 1 cut(s) 1397
BspANI GGCC 5 cut(s) 26, 60, 604, 1679, 1684
BspCNI CTCAG 9 cut(s) 31, 336, 427, 463, 495, 753, 804, 920, 1483
BspLI GGNNCC 6 cut(s) 292, 513, 621, 622, 1217, 1488
BspMI ACCTGC 1 cut(s) 1585
BspPI GGATC 7 cut(s) 578, 701, 714, 1210, 1223, 1251, 1386
BspQI GCTCTTC 2 cut(s) 1007, 1430
BspT104I TTCGAA 1 cut(s) 428
BspT107I GGYRCC 1 cut(s) 511
BspTNI GGTCTC 3 cut(s) 290, 977, 1442
BsrBI CCGCTC 2 cut(s) 1213, 1882
BsrFI RCCGGY 1 cut(s) 604
BsrI ACTGG 2 cut(s) 85, 256
BssAI RCCGGY 1 cut(s) 604
BssECI CCNNGG 6 cut(s) 27, 283, 1104, 1219, 1937, 2001
BssHII GCGCGC 1 cut(s) 1582
BssNI GRCGYC 4 cut(s) 330, 512, 912, 1197
BssT1I CCWWGG 1 cut(s) 1104
Bst2UI CCWGG 3 cut(s) 867, 1681, 2003
Bst4CI ACNGT 6 cut(s) 649, 1280, 1436, 1949, 2029, 2070
Bst6I CTCTTC 6 cut(s) 779, 1007, 1052, 1430, 1650, 1755
BstACI GRCGYC 4 cut(s) 330, 512, 912, 1197
BstBAI YACGTR 2 cut(s) 1781, 1803
BstBI TTCGAA 1 cut(s) 428
BstDSI CCRYGG 1 cut(s) 27
BstF5I GGATG 3 cut(s) 1158, 1471, 1717
BstH2I RGCGCY 1 cut(s) 515
BstHHI GCGC 8 cut(s) 377, 514, 572, 1292, 1497, 1561, 1584, 1586
BstMAI GTCTC 6 cut(s) 290, 824, 977, 1178, 1442, 1666
BstMCI CGRYCG 2 cut(s) 1032, 2031
BstNI CCWGG 3 cut(s) 867, 1681, 2003
BstPAI GACNNNNGTC 1 cut(s) 1434
BstSCI CCNGG 7 cut(s) 283, 865, 1679, 1936, 1937, 1973, 2001
BstSFI CTRYAG 1 cut(s) 1441
BstSLI GKGCMC 2 cut(s) 1550, 1872
BstV1I GCAGC 7 cut(s) 17, 47, 1087, 1138, 1566, 1624, 1680
BstV2I GAAGAC 4 cut(s) 753, 891, 1275, 1731
BstX2I RGATCY 3 cut(s) 719, 808, 1215
BstYI RGATCY 3 cut(s) 719, 808, 1215
Bsu36I CCTNAGG 1 cut(s) 907
BsuRI GGCC 5 cut(s) 26, 60, 604, 1679, 1684
BtgI CCRYGG 1 cut(s) 27
BtgZI GCGATG 1 cut(s) 1461
BtrI CACGTC 2 cut(s) 576, 834
BtsCI GGATG 3 cut(s) 1158, 1471, 1717
BtsIMutI CAGTG 2 cut(s) 78, 263
BtuMI TCGCGA 1 cut(s) 1397
BveI ACCTGC 1 cut(s) 1585
CaiI CAGNNNCTG 2 cut(s) 1531, 1600
CfoI GCGC 8 cut(s) 377, 514, 572, 1292, 1497, 1561, 1584, 1586
Cfr10I RCCGGY 1 cut(s) 604
Cfr13I GGNCC 1 cut(s) 620
Cfr9I CCCGGG 1 cut(s) 1937
CseI GACGC 8 cut(s) 319, 707, 901, 1195, 1543, 1707, 1745, 1870
Csp6I GTAC 2 cut(s) 406, 859
CspCI CAANNNNNGTGG 2 cut(s) 577, 612
CviAII CATG 7 cut(s) 66, 118, 738, 796, 1846, 1855, 1897
CviQI GTAC 2 cut(s) 406, 859
DinI GGCGCC 1 cut(s) 513
DrdI GACNNNNNNGTC 1 cut(s) 101
DseDI GACNNNNNNGTC 1 cut(s) 101
EaeI YGGCCR 3 cut(s) 24, 602, 1677
Eam1104I CTCTTC 6 cut(s) 779, 1007, 1052, 1430, 1650, 1755
EarI CTCTTC 6 cut(s) 779, 1007, 1052, 1430, 1650, 1755
EciI GGCGGA 6 cut(s) 536, 568, 723, 781, 1656, 1757
Ecl136II GAGCTC 3 cut(s) 348, 488, 1017
Eco130I CCWWGG 1 cut(s) 1104
Eco24I GRGCYC 3 cut(s) 350, 490, 1019
Eco31I GGTCTC 3 cut(s) 290, 977, 1442
Eco47I GGWCC 1 cut(s) 620
Eco53kI GAGCTC 3 cut(s) 348, 488, 1017
Eco72I CACGTG 2 cut(s) 1781, 1803
Eco81I CCTNAGG 1 cut(s) 907
Eco88I CYCGRG 2 cut(s) 1162, 1937
EcoICRI GAGCTC 3 cut(s) 348, 488, 1017
EcoO109I RGGNCCY 1 cut(s) 620
EcoRII CCWGG 3 cut(s) 865, 1679, 2001
EcoT14I CCWWGG 1 cut(s) 1104
EcoT22I ATGCAT 1 cut(s) 846
EcoT38I GRGCYC 3 cut(s) 350, 490, 1019
EgeI GGCGCC 1 cut(s) 513
EheI GGCGCC 1 cut(s) 513
ErhI CCWWGG 1 cut(s) 1104
Esp3I CGTCTC 2 cut(s) 824, 1178
FaeI CATG 7 cut(s) 69, 121, 741, 799, 1849, 1858, 1900
FalI AAGNNNNNCTT 2 cut(s) 1088, 1120
FaqI GGGAC 1 cut(s) 633
FatI CATG 7 cut(s) 65, 117, 737, 795, 1845, 1854, 1896
FauI CCCGC 6 cut(s) 575, 694, 1745, 1800, 1857, 1875
FbaI TGATCA 2 cut(s) 177, 1411
FblI GTMKAC 2 cut(s) 111, 234
FokI GGATG 3 cut(s) 1145, 1458, 1724
FriOI GRGCYC 3 cut(s) 350, 490, 1019
FspBI CTAG 1 cut(s) 1877
GlaI GCGC 8 cut(s) 376, 513, 571, 1291, 1496, 1560, 1583, 1585
GsuI CTGGAG 5 cut(s) 825, 1003, 1559, 1601, 1876
HaeII RGCGCY 1 cut(s) 515
HaeIII GGCC 5 cut(s) 26, 60, 604, 1679, 1684
HapII CCGG 9 cut(s) 285, 378, 605, 1260, 1376, 1638, 1670, 1938, 1975
HgaI GACGC 8 cut(s) 319, 707, 901, 1195, 1543, 1707, 1745, 1870
HhaI GCGC 8 cut(s) 377, 514, 572, 1292, 1497, 1561, 1584, 1586
Hin1I GRCGYC 4 cut(s) 330, 512, 912, 1197
Hin1II CATG 7 cut(s) 69, 121, 741, 799, 1849, 1858, 1900
Hin6I GCGC 8 cut(s) 375, 512, 570, 1290, 1495, 1559, 1582, 1584
HinP1I GCGC 8 cut(s) 375, 512, 570, 1290, 1495, 1559, 1582, 1584
HincII GTYRAC 3 cut(s) 112, 1934, 1971
HindII GTYRAC 3 cut(s) 112, 1934, 1971
HindIII AAGCTT 1 cut(s) 164
HpaII CCGG 9 cut(s) 285, 378, 605, 1260, 1376, 1638, 1670, 1938, 1975
HphI GGTGA 3 cut(s) 623, 1828, 2054
Hpy166II GTNNAC 6 cut(s) 112, 235, 1548, 1870, 1934, 1971
Hpy8I GTNNAC 6 cut(s) 112, 235, 1548, 1870, 1934, 1971
HpyAV CCTTC 6 cut(s) 133, 310, 903, 1035, 1163, 1495
HpyCH4III ACNGT 6 cut(s) 649, 1280, 1436, 1949, 2029, 2070
HpyCH4IV ACGT 8 cut(s) 231, 357, 370, 575, 833, 1197, 1780, 1802
HpySE526I ACGT 8 cut(s) 231, 357, 370, 575, 833, 1197, 1780, 1802
Hsp92I GRCGYC 4 cut(s) 330, 512, 912, 1197
Hsp92II CATG 7 cut(s) 69, 121, 741, 799, 1849, 1858, 1900
HspAI GCGC 8 cut(s) 375, 512, 570, 1290, 1495, 1559, 1582, 1584
KasI GGCGCC 1 cut(s) 511
KflI GGGWCCC 1 cut(s) 620
Ksp22I TGATCA 2 cut(s) 177, 1411
LguI GCTCTTC 2 cut(s) 1007, 1430
LmnI GCTCC 7 cut(s) 56, 353, 1022, 1134, 1620, 1626, 1895
Lsp1109I GCAGC 7 cut(s) 17, 47, 1087, 1138, 1566, 1624, 1680
LweI GCATC 7 cut(s) 17, 831, 947, 1078, 1215, 1302, 1351
MaeI CTAG 1 cut(s) 1877
MaeII ACGT 8 cut(s) 231, 357, 370, 575, 833, 1197, 1780, 1802
MaeIII GTNAC 3 cut(s) 366, 611, 1625
MbiI CCGCTC 2 cut(s) 1213, 1882
MflI RGATCY 3 cut(s) 719, 808, 1215
MhlI GDGCHC 5 cut(s) 350, 490, 1019, 1550, 1872
MluCI AATT 2 cut(s) 527, 870
Mly113I GGCGCC 1 cut(s) 512
MlyI GAGTC 5 cut(s) 485, 548, 970, 1030, 1682
MmeI TCCRAC 4 cut(s) 378, 1300, 1821, 1937
Mph1103I ATGCAT 1 cut(s) 846
MroXI GAANNNNTTC 2 cut(s) 467, 892
MspA1I CMGCKG 3 cut(s) 14, 38, 1579
MspI CCGG 9 cut(s) 285, 378, 605, 1260, 1376, 1638, 1670, 1938, 1975
MspR9I CCNGG 7 cut(s) 285, 867, 1681, 1938, 1939, 1975, 2003
Mva1269I GAATGC 1 cut(s) 1892
MvaI CCWGG 3 cut(s) 867, 1681, 2003
NarI GGCGCC 1 cut(s) 512
NciI CCSGG 4 cut(s) 285, 1938, 1939, 1975
NlaIII CATG 7 cut(s) 69, 121, 741, 799, 1849, 1858, 1900
NlaIV GGNNCC 6 cut(s) 292, 513, 621, 622, 1217, 1488
NmeAIII GCCGAG 2 cut(s) 1200, 1399
NmuCI GTSAC 2 cut(s) 611, 1625
NruI TCGCGA 1 cut(s) 1397
NsiI ATGCAT 1 cut(s) 846
NspV TTCGAA 1 cut(s) 428
PauI GCGCGC 1 cut(s) 1582
PciSI GCTCTTC 2 cut(s) 1007, 1430
PcsI WCGNNNNNNNCGW 9 cut(s) 108, 111, 234, 237, 243, 1206, 1272, 1541, 1682
PctI GAATGC 1 cut(s) 1892
PdmI GAANNNNTTC 2 cut(s) 467, 892
PfeI GAWTC 7 cut(s) 734, 883, 1041, 1263, 1366, 1825, 2012
PflFI GACNNNGTC 3 cut(s) 98, 557, 752
PfoI TCCNGGA 1 cut(s) 865
PleI GAGTC 5 cut(s) 484, 548, 969, 1030, 1681
PluTI GGCGCC 1 cut(s) 515
PmaCI CACGTG 2 cut(s) 1781, 1803
PmlI CACGTG 2 cut(s) 1781, 1803
PpsI GAGTC 5 cut(s) 484, 548, 969, 1030, 1681
Ppu21I YACGTR 2 cut(s) 1781, 1803
PpuMI RGGWCCY 1 cut(s) 620
PshAI GACNNNNGTC 1 cut(s) 1434
Psp124BI GAGCTC 3 cut(s) 350, 490, 1019
Psp5II RGGWCCY 1 cut(s) 620
Psp6I CCWGG 3 cut(s) 865, 1679, 2001
PspCI CACGTG 2 cut(s) 1781, 1803
PspGI CCWGG 3 cut(s) 865, 1679, 2001
PspN4I GGNNCC 6 cut(s) 292, 513, 621, 622, 1217, 1488
PspPI GGNCC 1 cut(s) 620
PspPPI RGGWCCY 1 cut(s) 620
PstNI CAGNNNCTG 2 cut(s) 1531, 1600
PsuI RGATCY 3 cut(s) 719, 808, 1215
PsyI GACNNNGTC 3 cut(s) 98, 557, 752
PteI GCGCGC 1 cut(s) 1582
PvuII CAGCTG 1 cut(s) 38
RruI TCGCGA 1 cut(s) 1397
RsaI GTAC 2 cut(s) 407, 860
RsaNI GTAC 2 cut(s) 406, 859
SacI GAGCTC 3 cut(s) 350, 490, 1019
SalI GTCGAC 1 cut(s) 110
SapI GCTCTTC 2 cut(s) 1007, 1430
Sau96I GGNCC 1 cut(s) 620
ScaI AGTACT 1 cut(s) 407
SchI GAGTC 5 cut(s) 485, 548, 970, 1030, 1682
ScrFI CCNGG 7 cut(s) 285, 867, 1681, 1938, 1939, 1975, 2003
SduI GDGCHC 5 cut(s) 350, 490, 1019, 1550, 1872
SfaNI GCATC 7 cut(s) 17, 831, 947, 1078, 1215, 1302, 1351
SfcI CTRYAG 1 cut(s) 1441
SfoI GGCGCC 1 cut(s) 513
SfuI TTCGAA 1 cut(s) 428
SinI GGWCC 1 cut(s) 620
SmaI CCCGGG 1 cut(s) 1939
SmlI CTYRAG 2 cut(s) 491, 1463
SmoI CTYRAG 2 cut(s) 491, 1463
Sse9I AATT 2 cut(s) 527, 870
SspDI GGCGCC 1 cut(s) 511
SspMI CTAG 1 cut(s) 1877
SstI GAGCTC 3 cut(s) 350, 490, 1019
StyD4I CCNGG 7 cut(s) 283, 865, 1679, 1936, 1937, 1973, 2001
StyI CCWWGG 1 cut(s) 1104
TaaI ACNGT 6 cut(s) 649, 1280, 1436, 1949, 2029, 2070
TaiI ACGT 8 cut(s) 234, 360, 373, 578, 836, 1200, 1783, 1805
TasI AATT 2 cut(s) 527, 870
TatI WGTACW 2 cut(s) 405, 858
TfiI GAWTC 7 cut(s) 734, 883, 1041, 1263, 1366, 1825, 2012
TscAI CASTG 2 cut(s) 85, 263
TseFI GTSAC 2 cut(s) 611, 1625
TseI GCWGC 7 cut(s) 5, 35, 1100, 1126, 1579, 1612, 1693
Tsp45I GTSAC 2 cut(s) 611, 1625
TspDTI ATGAA 3 cut(s) 726, 812, 1913
TspGWI ACGGA 5 cut(s) 413, 547, 727, 1293, 1613
TspMI CCCGGG 1 cut(s) 1937
TspRI CASTG 2 cut(s) 85, 263
Tth111I GACNNNGTC 3 cut(s) 98, 557, 752
VneI GTGCAC 2 cut(s) 1546, 1868
VpaK11BI GGWCC 1 cut(s) 620
XapI RAATTY 1 cut(s) 870
XcmI CCANNNNNNNNNTGG 1 cut(s) 1003
XmaI CCCGGG 1 cut(s) 1937
XmiI GTMKAC 2 cut(s) 111, 234
XmnI GAANNNNTTC 2 cut(s) 467, 892
XspI CTAG 1 cut(s) 1877
ZraI GACGTC 1 cut(s) 1198
ZrmI AGTACT 1 cut(s) 407
Zsp2I ATGCAT 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.