pycom02g22670

transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
20882103 .. 20886770
4668 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g22670.7

Sequence Viewer

Length: 1329 bp
ATGAAGAGGTACTCTAGTTTCTCTTGCTCTTCTTCTTCTTCTTCTTCTTCTTCGTGCTCGGCGCTGGAGATTCCGAAGCACAACGTTCAAGCCGAGATTCAGAAACTGAAACCGAAACCGAAACCGAAACCGAAACGCGTTCGAAAGAAGAGAAAAACCGCAGAAGCAGCAGCAGCAGCAGACAAATGCAAGAATGGCAACACCCCAAAGTCAGGAACGGGAGGCAGAAGAAGCTCCATTTACAGAGGGGTCACCAGGCACAGATGGACCGGGCGGTTTGAAGCTCATCTGTGGGACAAGAGTTCATGGAACAACATCCAGAACAAGAAGGGACGACAAGTTTATTTAGGGGCCTATGATAGTGAAGAGGGTGCTGCTCGTACCTACGATCTAGCTGCCCTTAAATATTGGGGGCCTGGTACAATACTCAATTTCCCGCTAGAAACATACACAAGGGAAATTGAAGAAATGGAAAAGGCTACCAGGGAAGAATACCTAGCATCATTGCGCCGGCTGAGCAGTGGATTTTCGAGAGGAGTTTCAAAGTACCGCGGGGTGGCGAGGCATCATCACAATGGGAGATGGGAGGCGAGAATCGGAAGAGTTTTCGGAAACAAGTATTTATACCTCGGAACTTATAATACACAAGAGGAGGCAGCAGCTGCATATGATATGGCGGCAATAGAGTACAGAGGAACAAATGCAGTGACCAATTTTGATATCAGCAACTACGTTGACAGAGTCAAGAAGAAAATCCACCCTCTGGATCATCAAAAATCAGAGGGTCAACAGCCTTCCAATTGCTCGAACACTGGACCACACAAACAAGAAGAAGAAGTCGAATGCAAAGTGCACCAATTGCTACCACAACAGCAGCAGCAACAACAAGAACAAGAACAACGCAAAGTGCACCAATTGCAACCGCAACAACAGCAACAAGAACAAGAACGAATGATTTACCCTCATCTGCTGCATTGCATGGAAAGCAATACAATGGAGCAAGTAATGGATCGTGATCATGCAGAGGAGCACCAGTTTAGTTGGAACTTTTTGGACACCGGAATGATGACTCAGCAGGTTCCGGTTCCCGATGACATCCCTCTTGACAACAAGTCGTTGGAGTTACCGGACTCGTTCGAGGACTTGGGGTTCGAAGAGAATTTTGACTTGATATTTGGTGCAACTGATGATGGCAGTTTGGGTGGCTTGATGGAATCTGCTGGCTGTGGGGTGGATCAGGTGGGTGTGGATGTGGGTGTCCCAGGAAACTTGGAGGATAATGGGTCTTCTTTTTCTCCATCATCAACAACTACCTCTCTTTCTTTGTAA

Protein Analysis

443

Amino Acids

49.92

Weight (kDa)

6.75

Isoelectric Point (pI)

52.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 639
Acc36I ACCTGC 1 cut(s) 1066
AccB7I CCANNNNNTGG 1 cut(s) 763
AccII CGCG 2 cut(s) 138, 552
AciI CCGC 7 cut(s) 159, 274, 437, 550, 552, 677, 923
AclI AACGTT 1 cut(s) 84
AclWI GGATC 3 cut(s) 774, 1017, 1242
AcsI RAATTY 1 cut(s) 1159
AfaI GTAC 5 cut(s) 11, 382, 421, 548, 689
AfiI CCNNNNNNNGG 3 cut(s) 212, 556, 763
AflIII ACRYGT 1 cut(s) 136
AgsI TTSAA 4 cut(s) 89, 281, 464, 543
AhdI GACNNNNNGTC 1 cut(s) 1111
AjnI CCWGG 4 cut(s) 254, 415, 482, 1261
AloI GAACNNNNNNTCC 2 cut(s) 1133, 1165
AluBI AGCT 4 cut(s) 234, 284, 395, 662
AluI AGCT 4 cut(s) 234, 284, 395, 662
Alw21I GWGCWC 4 cut(s) 59, 855, 912, 1032
Alw44I GTGCAC 2 cut(s) 851, 908
AlwI GGATC 3 cut(s) 774, 1017, 1242
AlwNI CAGNNNCTG 2 cut(s) 106, 662
AoxI GGCC 2 cut(s) 351, 413
ApaLI GTGCAC 2 cut(s) 851, 908
ApoI RAATTY 1 cut(s) 1159
ArsI GACNNNNNNTTYG 4 cut(s) 1133, 1157, 1165, 1189
AspLEI GCGC 2 cut(s) 64, 510
AspS9I GGNCC 4 cut(s) 267, 351, 413, 815
AsuC2I CCSGG 1 cut(s) 271
AsuHPI GGTGA 1 cut(s) 244
AsuII TTCGAA 2 cut(s) 142, 1152
AvaII GGWCC 2 cut(s) 267, 815
BaeGI GKGCMC 2 cut(s) 855, 912
BaeI ACNNNNGTAYC 1 cut(s) 34
BbsI GAAGAC 1 cut(s) 1278
Bbv12I GWGCWC 4 cut(s) 59, 855, 912, 1032
BccI CCATC 5 cut(s) 258, 576, 1184, 1204, 1306
BcgI CGANNNNNNTGC 2 cut(s) 377, 411
BciT130I CCWGG 4 cut(s) 256, 417, 484, 1263
BclI TGATCA 1 cut(s) 1015
BcnI CCSGG 1 cut(s) 271
BfaI CTAG 4 cut(s) 15, 392, 440, 497
BfoI RGCGCY 1 cut(s) 65
BfuAI ACCTGC 1 cut(s) 1066
BlpI GCTNAGC 1 cut(s) 515
Bme1390I CCNGG 5 cut(s) 256, 271, 417, 484, 1263
Bme18I GGWCC 2 cut(s) 267, 815
BmeRI GACNNNNNGTC 1 cut(s) 1111
BmgT120I GGNCC 4 cut(s) 267, 351, 413, 815
BmiI GGNNCC 4 cut(s) 352, 414, 1080, 1086
BmrFI CCNGG 5 cut(s) 256, 271, 417, 484, 1263
BmsI GCATC 2 cut(s) 509, 574
BpiI GAAGAC 1 cut(s) 1278
BpmI CTGGAG 1 cut(s) 86
Bpu1102I GCTNAGC 1 cut(s) 515
Bpu14I TTCGAA 2 cut(s) 142, 1152
BpuMI CCSGG 1 cut(s) 271
BsaBI GATNNNNATC 1 cut(s) 1014
BsaJI CCNNGG 4 cut(s) 483, 550, 628, 1261
BsaWI WCCGGW 3 cut(s) 1058, 1081, 1126
BsaXI ACNNNNNCTCC 2 cut(s) 1019, 1049
Bsc4I CCNNNNNNNGG 3 cut(s) 212, 556, 763
Bse118I RCCGGY 1 cut(s) 510
Bse1I ACTGG 2 cut(s) 817, 1033
Bse3DI GCAATG 2 cut(s) 503, 973
Bse8I GATNNNNATC 1 cut(s) 1014
BseBI CCWGG 4 cut(s) 256, 417, 484, 1263
BseDI CCNNGG 4 cut(s) 483, 550, 628, 1261
BseGI GGATG 3 cut(s) 315, 1095, 1255
BseJI GATNNNNATC 1 cut(s) 1014
BseLI CCNNNNNNNGG 3 cut(s) 212, 556, 763
BseMI GCAATG 2 cut(s) 503, 973
BseMII CTCAG 2 cut(s) 506, 1085
BseNI ACTGG 2 cut(s) 817, 1033
BseRI GAGGAG 3 cut(s) 549, 665, 1040
BseSI GKGCMC 2 cut(s) 855, 912
Bsh1236I CGCG 2 cut(s) 138, 552
BshFI GGCC 2 cut(s) 353, 415
BsiHKAI GWGCWC 4 cut(s) 59, 855, 912, 1032
BsiSI CCGG 5 cut(s) 270, 511, 1059, 1082, 1127
BslFI GGGAC 3 cut(s) 308, 345, 1244
BslI CCNNNNNNNGG 3 cut(s) 212, 556, 763
BsmFI GGGAC 3 cut(s) 308, 345, 1244
BsmI GAATGC 1 cut(s) 848
BsnI GGCC 2 cut(s) 353, 415
Bsp119I TTCGAA 2 cut(s) 142, 1152
Bsp1286I GDGCHC 4 cut(s) 59, 855, 912, 1032
Bsp143I GATC 5 cut(s) 388, 766, 1009, 1015, 1234
Bsp1720I GCTNAGC 1 cut(s) 515
BspACI CCGC 7 cut(s) 159, 274, 437, 550, 552, 677, 923
BspANI GGCC 2 cut(s) 353, 415
BspCNI CTCAG 2 cut(s) 507, 1084
BspFNI CGCG 2 cut(s) 138, 552
BspLI GGNNCC 4 cut(s) 352, 414, 1080, 1086
BspMI ACCTGC 1 cut(s) 1066
BspPI GGATC 3 cut(s) 774, 1017, 1242
BspQI GCTCTTC 1 cut(s) 34
BspT104I TTCGAA 2 cut(s) 142, 1152
BsrDI GCAATG 2 cut(s) 503, 973
BsrFI RCCGGY 1 cut(s) 510
BsrI ACTGG 2 cut(s) 817, 1033
BssAI RCCGGY 1 cut(s) 510
BssECI CCNNGG 4 cut(s) 483, 550, 628, 1261
BssMI GATC 5 cut(s) 388, 766, 1009, 1015, 1234
Bst2UI CCWGG 4 cut(s) 256, 417, 484, 1263
Bst6I CTCTTC 5 cut(s) 34, 143, 360, 595, 1149
BstAPI GCANNNNNTGC 3 cut(s) 662, 859, 916
BstBI TTCGAA 2 cut(s) 142, 1152
BstC8I GCNNGC 2 cut(s) 512, 1222
BstDEI CTNAG 2 cut(s) 515, 1071
BstDSI CCRYGG 1 cut(s) 550
BstEII GGTNACC 1 cut(s) 250
BstF5I GGATG 3 cut(s) 315, 1095, 1255
BstFNI CGCG 2 cut(s) 138, 552
BstH2I RGCGCY 1 cut(s) 65
BstHHI GCGC 2 cut(s) 64, 510
BstKTI GATC 5 cut(s) 391, 769, 1012, 1018, 1237
BstMBI GATC 5 cut(s) 388, 766, 1009, 1015, 1234
BstNI CCWGG 4 cut(s) 256, 417, 484, 1263
BstPI GGTNACC 1 cut(s) 250
BstSCI CCNGG 5 cut(s) 254, 269, 415, 482, 1261
BstSLI GKGCMC 2 cut(s) 855, 912
BstUI CGCG 2 cut(s) 138, 552
BstV2I GAAGAC 1 cut(s) 1278
BsuRI GGCC 2 cut(s) 353, 415
BtgI CCRYGG 1 cut(s) 550
BtsCI GGATG 3 cut(s) 315, 1095, 1255
BtsI GCAGTG 2 cut(s) 526, 711
BtsIMutI CAGTG 3 cut(s) 526, 711, 810
BveI ACCTGC 1 cut(s) 1066
Cac8I GCNNGC 2 cut(s) 512, 1222
CaiI CAGNNNCTG 2 cut(s) 106, 662
CfoI GCGC 2 cut(s) 64, 510
Cfr10I RCCGGY 1 cut(s) 510
Cfr13I GGNCC 4 cut(s) 267, 351, 413, 815
Cfr42I CCGCGG 1 cut(s) 553
Csp6I GTAC 5 cut(s) 10, 381, 420, 547, 688
CviAII CATG 3 cut(s) 306, 979, 1019
CviQI GTAC 5 cut(s) 10, 381, 420, 547, 688
DdeI CTNAG 2 cut(s) 515, 1071
DpnI GATC 5 cut(s) 390, 768, 1011, 1017, 1236
DpnII GATC 5 cut(s) 388, 766, 1009, 1015, 1234
DriI GACNNNNNGTC 1 cut(s) 1111
Eam1104I CTCTTC 5 cut(s) 34, 143, 360, 595, 1149
Eam1105I GACNNNNNGTC 1 cut(s) 1111
EarI CTCTTC 5 cut(s) 34, 143, 360, 595, 1149
Eco32I GATATC 1 cut(s) 721
Eco47I GGWCC 2 cut(s) 267, 815
Eco91I GGTNACC 1 cut(s) 250
EcoO109I RGGNCCY 2 cut(s) 351, 413
EcoO65I GGTNACC 1 cut(s) 250
EcoRII CCWGG 4 cut(s) 254, 415, 482, 1261
EcoRV GATATC 1 cut(s) 721
FaeI CATG 3 cut(s) 309, 982, 1022
FaqI GGGAC 3 cut(s) 308, 345, 1244
FatI CATG 3 cut(s) 305, 978, 1018
FauI CCCGC 2 cut(s) 444, 545
FauNDI CATATG 1 cut(s) 667
FbaI TGATCA 1 cut(s) 1015
FokI GGATG 3 cut(s) 302, 1082, 1262
FspBI CTAG 4 cut(s) 15, 392, 440, 497
GlaI GCGC 2 cut(s) 63, 509
GsuI CTGGAG 1 cut(s) 86
HaeII RGCGCY 1 cut(s) 65
HaeIII GGCC 2 cut(s) 353, 415
HapII CCGG 5 cut(s) 270, 511, 1059, 1082, 1127
HhaI GCGC 2 cut(s) 64, 510
Hin1II CATG 3 cut(s) 309, 982, 1022
Hin6I GCGC 2 cut(s) 62, 508
HinP1I GCGC 2 cut(s) 62, 508
HincII GTYRAC 2 cut(s) 736, 788
HindII GTYRAC 2 cut(s) 736, 788
HinfI GANTC 7 cut(s) 70, 97, 594, 741, 1069, 1130, 1214
HpaII CCGG 5 cut(s) 270, 511, 1059, 1082, 1127
HphI GGTGA 1 cut(s) 244
Hpy166II GTNNAC 4 cut(s) 736, 788, 853, 910
Hpy188I TCNGA 6 cut(s) 75, 102, 599, 611, 632, 781
Hpy188III TCNNGA 8 cut(s) 213, 319, 531, 745, 764, 1013, 1088, 1103
Hpy8I GTNNAC 4 cut(s) 736, 788, 853, 910
HpyAV CCTTC 2 cut(s) 322, 804
HpyCH4IV ACGT 2 cut(s) 84, 732
HpyF3I CTNAG 2 cut(s) 515, 1071
HpySE526I ACGT 2 cut(s) 84, 732
Hsp92II CATG 3 cut(s) 309, 982, 1022
HspAI GCGC 2 cut(s) 62, 508
KroI GCCGGC 1 cut(s) 510
KroNI GCCGGC 1 cut(s) 512
Ksp22I TGATCA 1 cut(s) 1015
KspI CCGCGG 1 cut(s) 553
Kzo9I GATC 5 cut(s) 388, 766, 1009, 1015, 1234
LguI GCTCTTC 1 cut(s) 34
LmnI GCTCC 3 cut(s) 239, 997, 1027
LweI GCATC 2 cut(s) 509, 574
MaeI CTAG 4 cut(s) 15, 392, 440, 497
MaeII ACGT 2 cut(s) 84, 732
MaeIII GTNAC 3 cut(s) 250, 706, 1122
MalI GATC 5 cut(s) 390, 768, 1011, 1017, 1236
MboI GATC 5 cut(s) 388, 766, 1009, 1015, 1234
MfeI CAATTG 3 cut(s) 799, 857, 914
MhlI GDGCHC 4 cut(s) 59, 855, 912, 1032
MluCI AATT 7 cut(s) 430, 459, 712, 799, 857, 914, 1159
MluI ACGCGT 1 cut(s) 136
MlyI GAGTC 3 cut(s) 750, 1063, 1124
MmeI TCCRAC 2 cut(s) 1022, 1098
MroNI GCCGGC 1 cut(s) 510
MseI TTAA 1 cut(s) 402
MslI CAYNNNNRTG 2 cut(s) 573, 1061
MspA1I CMGCKG 2 cut(s) 552, 662
MspI CCGG 5 cut(s) 270, 511, 1059, 1082, 1127
MspR9I CCNGG 5 cut(s) 256, 271, 417, 484, 1263
MunI CAATTG 3 cut(s) 799, 857, 914
Mva1269I GAATGC 1 cut(s) 848
MvaI CCWGG 4 cut(s) 256, 417, 484, 1263
MvnI CGCG 2 cut(s) 138, 552
NaeI GCCGGC 1 cut(s) 512
NciI CCSGG 1 cut(s) 271
NdeI CATATG 1 cut(s) 667
NdeII GATC 5 cut(s) 388, 766, 1009, 1015, 1234
NgoMIV GCCGGC 1 cut(s) 510
NlaIII CATG 3 cut(s) 309, 982, 1022
NlaIV GGNNCC 4 cut(s) 352, 414, 1080, 1086
NmeAIII GCCGAG 2 cut(s) 38, 118
NmuCI GTSAC 2 cut(s) 250, 706
NspV TTCGAA 2 cut(s) 142, 1152
PciSI GCTCTTC 1 cut(s) 34
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PctI GAATGC 1 cut(s) 848
PdiI GCCGGC 1 cut(s) 512
PfeI GAWTC 4 cut(s) 70, 97, 594, 1214
PflFI GACNNNGTC 1 cut(s) 740
PflMI CCANNNNNTGG 1 cut(s) 763
PleI GAGTC 3 cut(s) 749, 1063, 1124
PpsI GAGTC 3 cut(s) 749, 1063, 1124
PsiI TTATAA 1 cut(s) 639
Psp1406I AACGTT 1 cut(s) 84
Psp6I CCWGG 4 cut(s) 254, 415, 482, 1261
PspEI GGTNACC 1 cut(s) 250
PspGI CCWGG 4 cut(s) 254, 415, 482, 1261
PspN4I GGNNCC 4 cut(s) 352, 414, 1080, 1086
PspPI GGNCC 4 cut(s) 267, 351, 413, 815
PsrI GAACNNNNNNTAC 2 cut(s) 625, 657
PstNI CAGNNNCTG 2 cut(s) 106, 662
PsyI GACNNNGTC 1 cut(s) 740
PvuII CAGCTG 1 cut(s) 662
RsaI GTAC 5 cut(s) 11, 382, 421, 548, 689
RsaNI GTAC 5 cut(s) 10, 381, 420, 547, 688
RseI CAYNNNNRTG 2 cut(s) 573, 1061
SacII CCGCGG 1 cut(s) 553
SapI GCTCTTC 1 cut(s) 34
SaqAI TTAA 1 cut(s) 402
Sau3AI GATC 5 cut(s) 388, 766, 1009, 1015, 1234
Sau96I GGNCC 4 cut(s) 267, 351, 413, 815
SchI GAGTC 3 cut(s) 750, 1063, 1124
ScrFI CCNGG 5 cut(s) 256, 271, 417, 484, 1263
SduI GDGCHC 4 cut(s) 59, 855, 912, 1032
SfaNI GCATC 2 cut(s) 509, 574
Sfr303I CCGCGG 1 cut(s) 553
SfuI TTCGAA 2 cut(s) 142, 1152
SgrBI CCGCGG 1 cut(s) 553
SinI GGWCC 2 cut(s) 267, 815
SmiMI CAYNNNNRTG 2 cut(s) 573, 1061
Sse9I AATT 7 cut(s) 430, 459, 712, 799, 857, 914, 1159
SsiI CCGC 7 cut(s) 159, 274, 437, 550, 552, 677, 923
SspI AATATT 1 cut(s) 407
SspMI CTAG 4 cut(s) 15, 392, 440, 497
StyD4I CCNGG 5 cut(s) 254, 269, 415, 482, 1261
TaiI ACGT 2 cut(s) 87, 735
TaqI TCGA 6 cut(s) 142, 530, 806, 840, 1137, 1152
TasI AATT 7 cut(s) 430, 459, 712, 799, 857, 914, 1159
TatI WGTACW 1 cut(s) 687
TauI GCSGC 1 cut(s) 680
TfiI GAWTC 4 cut(s) 70, 97, 594, 1214
Tru1I TTAA 1 cut(s) 402
Tru9I TTAA 1 cut(s) 402
TscAI CASTG 3 cut(s) 526, 711, 817
TseFI GTSAC 2 cut(s) 250, 706
Tsp45I GTSAC 2 cut(s) 250, 706
TspDTI ATGAA 2 cut(s) 17, 294
TspRI CASTG 3 cut(s) 526, 711, 817
Tth111I GACNNNGTC 1 cut(s) 740
Van91I CCANNNNNTGG 1 cut(s) 763
VneI GTGCAC 2 cut(s) 851, 908
VpaK11BI GGWCC 2 cut(s) 267, 815
XapI RAATTY 1 cut(s) 1159
XspI CTAG 4 cut(s) 15, 392, 440, 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.