transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54320 AT3G54320 AT3G54320 AT3G54320 AT3G54320 |
| fragaria_vesca | FvH4_7g04950 FvH4_7g04950 FvH4_7g04950 |
| malus_domestica | MD02G1265300.v1.1 MD07G1054100.v1.1 |
| prunus_persica | Prupe.2G060200_v2.0.a1 |
| pyrus_communis | pycom02g22670 pycom07g04190 |
| rosa_chinensis | RchiOBHm_Chr1g0331141 |
| rosa_laevigata | RLG00000029750 |
| rosa_multiflora | Rmu_sc0006123.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00319410 |
| rosa_rugosa | Rorug01G0091800 |
| rosa_samantha | Rh1AG114700 Rh1BG087400 Rh1CG110700 Rh1DG119400 |
| rosa_wichuraiana | Rw1G009290 Rw3G018400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 183 |
| AclWI | GGATC | 3 cut(s) | 11, 24, 95 |
| AcsI | RAATTY | 1 cut(s) | 148 |
| AcuI | CTGAAG | 1 cut(s) | 228 |
| AcyI | GRCGYC | 1 cut(s) | 180 |
| AgsI | TTSAA | 4 cut(s) | 46, 143, 224, 288 |
| AluBI | AGCT | 2 cut(s) | 212, 227 |
| AluI | AGCT | 2 cut(s) | 212, 227 |
| AlwI | GGATC | 3 cut(s) | 11, 24, 95 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 80 |
| ApeKI | GCWGC | 1 cut(s) | 227 |
| ApoI | RAATTY | 1 cut(s) | 148 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 122, 154 |
| AsuHPI | GGTGA | 1 cut(s) | 23 |
| BamHI | GGATCC | 1 cut(s) | 16 |
| BbsI | GAAGAC | 1 cut(s) | 252 |
| BbvI | GCAGC | 1 cut(s) | 214 |
| BccI | CCATC | 1 cut(s) | 289 |
| BclI | TGATCA | 1 cut(s) | 28 |
| BisI | GCNGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 1 cut(s) | 229 |
| BmiI | GGNNCC | 1 cut(s) | 18 |
| BpiI | GAAGAC | 1 cut(s) | 252 |
| BsaBI | GATNNNNATC | 1 cut(s) | 99 |
| BsaHI | GRCGYC | 1 cut(s) | 180 |
| BsaJI | CCNNGG | 1 cut(s) | 105 |
| Bse1I | ACTGG | 4 cut(s) | 34, 40, 74, 96 |
| Bse8I | GATNNNNATC | 1 cut(s) | 99 |
| BseDI | CCNNGG | 1 cut(s) | 105 |
| BseGI | GGATG | 2 cut(s) | 13, 84 |
| BseJI | GATNNNNATC | 1 cut(s) | 99 |
| BseNI | ACTGG | 4 cut(s) | 34, 40, 74, 96 |
| BseRI | GAGGAG | 1 cut(s) | 255 |
| BseXI | GCAGC | 1 cut(s) | 214 |
| BslFI | GGGAC | 1 cut(s) | 143 |
| BsmFI | GGGAC | 1 cut(s) | 143 |
| Bsp143I | GATC | 3 cut(s) | 16, 28, 100 |
| BspLI | GGNNCC | 1 cut(s) | 18 |
| BspPI | GGATC | 3 cut(s) | 11, 24, 95 |
| BsrI | ACTGG | 4 cut(s) | 34, 40, 74, 96 |
| BssECI | CCNNGG | 1 cut(s) | 105 |
| BssMI | GATC | 3 cut(s) | 16, 28, 100 |
| BssNI | GRCGYC | 1 cut(s) | 180 |
| BstACI | GRCGYC | 1 cut(s) | 180 |
| BstF5I | GGATG | 2 cut(s) | 13, 84 |
| BstKTI | GATC | 3 cut(s) | 19, 31, 103 |
| BstMBI | GATC | 3 cut(s) | 16, 28, 100 |
| BstV1I | GCAGC | 1 cut(s) | 214 |
| BstV2I | GAAGAC | 1 cut(s) | 252 |
| BstX2I | RGATCY | 1 cut(s) | 16 |
| BstYI | RGATCY | 1 cut(s) | 16 |
| BtsCI | GGATG | 2 cut(s) | 13, 84 |
| BtsIMutI | CAGTG | 2 cut(s) | 89, 204 |
| CaiI | CAGNNNCTG | 1 cut(s) | 80 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 172, 207 |
| CviAII | CATG | 1 cut(s) | 13 |
| CviJI | RGCY | 4 cut(s) | 138, 195, 212, 227 |
| CviKI_1 | RGCY | 4 cut(s) | 138, 195, 212, 227 |
| DpnI | GATC | 3 cut(s) | 18, 30, 102 |
| DpnII | GATC | 3 cut(s) | 16, 28, 100 |
| Eco57I | CTGAAG | 1 cut(s) | 228 |
| FaeI | CATG | 1 cut(s) | 16 |
| FaiI | YATR | 1 cut(s) | 14 |
| FaqI | GGGAC | 1 cut(s) | 143 |
| FatI | CATG | 1 cut(s) | 12 |
| FbaI | TGATCA | 1 cut(s) | 28 |
| Fnu4HI | GCNGC | 1 cut(s) | 228 |
| FokI | GGATG | 2 cut(s) | 20, 71 |
| Fsp4HI | GCNGC | 1 cut(s) | 228 |
| GluI | GCNGC | 1 cut(s) | 228 |
| Hin1I | GRCGYC | 1 cut(s) | 180 |
| Hin1II | CATG | 1 cut(s) | 16 |
| HindIII | AAGCTT | 1 cut(s) | 210 |
| HinfI | GANTC | 1 cut(s) | 64 |
| HphI | GGTGA | 1 cut(s) | 23 |
| Hpy188I | TCNGA | 1 cut(s) | 109 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| Hpy99I | CGWCG | 1 cut(s) | 301 |
| HpyAV | CCTTC | 2 cut(s) | 279, 285 |
| HpyCH4IV | ACGT | 2 cut(s) | 180, 296 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 173 |
| HpySE526I | ACGT | 2 cut(s) | 180, 296 |
| Hsp92I | GRCGYC | 1 cut(s) | 180 |
| Hsp92II | CATG | 1 cut(s) | 16 |
| Ksp22I | TGATCA | 1 cut(s) | 28 |
| Kzo9I | GATC | 3 cut(s) | 16, 28, 100 |
| LpnPI | CCDG | 7 cut(s) | 47, 53, 77, 87, 93, 129, 249 |
| Lsp1109I | GCAGC | 1 cut(s) | 214 |
| MaeII | ACGT | 2 cut(s) | 180, 296 |
| MaeIII | GTNAC | 2 cut(s) | 176, 308 |
| MalI | GATC | 3 cut(s) | 18, 30, 102 |
| MboI | GATC | 3 cut(s) | 16, 28, 100 |
| MboII | GAAGA | 3 cut(s) | 155, 252, 276 |
| MfeI | CAATTG | 1 cut(s) | 46 |
| MflI | RGATCY | 1 cut(s) | 16 |
| MluCI | AATT | 3 cut(s) | 46, 148, 184 |
| MnlI | CCTC | 3 cut(s) | 115, 161, 276 |
| MunI | CAATTG | 1 cut(s) | 46 |
| NdeII | GATC | 3 cut(s) | 16, 28, 100 |
| NlaIII | CATG | 1 cut(s) | 16 |
| NlaIV | GGNNCC | 1 cut(s) | 18 |
| NmuCI | GTSAC | 1 cut(s) | 176 |
| PfeI | GAWTC | 1 cut(s) | 64 |
| PkrI | GCNGC | 1 cut(s) | 229 |
| PspN4I | GGNNCC | 1 cut(s) | 18 |
| PstNI | CAGNNNCTG | 1 cut(s) | 80 |
| PsuI | RGATCY | 1 cut(s) | 16 |
| SatI | GCNGC | 1 cut(s) | 228 |
| Sau3AI | GATC | 3 cut(s) | 16, 28, 100 |
| SetI | ASST | 5 cut(s) | 172, 183, 214, 229, 299 |
| Sse9I | AATT | 3 cut(s) | 46, 148, 184 |
| TaiI | ACGT | 2 cut(s) | 183, 299 |
| TasI | AATT | 3 cut(s) | 46, 148, 184 |
| TfiI | GAWTC | 1 cut(s) | 64 |
| TscAI | CASTG | 2 cut(s) | 96, 211 |
| TseFI | GTSAC | 1 cut(s) | 176 |
| TseI | GCWGC | 1 cut(s) | 227 |
| Tsp45I | GTSAC | 1 cut(s) | 176 |
| TspRI | CASTG | 2 cut(s) | 96, 211 |
| XapI | RAATTY | 1 cut(s) | 148 |
| ZraI | GACGTC | 1 cut(s) | 181 |