pycom07g04190

transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
3628974 .. 3633704
4731 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g04190.4

Sequence Viewer

Length: 1323 bp
ATGAAGAGGTCCCCCAGTTTCTCCTGCTCTTCTTCTTCTTCGTCCTGCGCCGGGCCGGAGATTCCGAACCACTGCGTCCAGGCGGAGATTCAGAAACCGAAACCGAAACCGAAACGCGTTCGGAAGAAGAGAAAAACCTCAGGAGCAGCAGCGGAAGAGAAATGCCAGAATGCCAACGCCCCGAATTCAGGAACGGCAGGCGGAAGAAGCTCCGTTTACAGAGGGGTCACCAGGCACAGATGGACCGGGCGGTTTGAAGCTCATCTGTGGGACAAGAGTTCATGGAACAACGTCCAGAATAAGAAAGGACGGCAAGTTTATTTGGGGGCCTATGATAGTGAAGAGGCTGCTGCTCATACCTATGATCTAGCTGCCCTTAAATATTGGGGTCCTGGTACTGTACTCAACTTCCCGCTAGAAACATACACAAAGGAAATTGAAGAAATGCAGAAGGCCACCAGGGAAGAATACCTAGCATCATTGCGCCGGAGGAGCAGTGGATTTTCGAGAGGGGTTTCAAAGTACCGTGGGGTGGCGAGGCATCATCACAATGGGAGATGGGAGGCGAGAATCGGAAGAGTTTCCGGAAACAAGTACTTATACCTCGGAACATATGATACACAAGAGGAGGCAGCAGCTGCATATGATAAGGCGGCGATAGAGTACAGAGGAACAAATGCAGTGACCAATTTTGATATCAGCAACTACATTGACAGAGTCAAGAAGAAAATCCATCCTCTGGATCATCAAGAATCAGAGGGTCAACCGCCTTCCACATGCTCGAACATTGGACCACCCCAAGAAGAAGAAGAAGAAGTCGACCGCAAAGTGCACCCATTACTACCACAACAGCAGCAGCAACAAGAACAACGCAAAGTGCACCAATTGCAACCGCAACAGCAGCAGCAAGAACAAAACCAAGAGCTAAAACAAGAACGAATGATCTCGCTGCAACTTCATTACCCTCATCTGCTGCATTGCATCGGAAGCAATACAATGGAGCAAGTAATGGATCCTGAGCATGCAAAGGAGCACCAGTTTAGTTGGAACTTTTTGGACACCGGAATGATGACTCAGCAGCTTCCAGTTCCCGAAGACATCCACCTTGACAAGTCGTTGGAGTTACCTGACTTGTTCGAGGACTTGGGGTTCGAAGAGAATTTTGACTTGATATTTGGTGCAGCTGGGGATGGCAGCTTGGGTGGCTTGATGGAATCTGCTGGGAGCGGGGCGGATCAGGTGGGTGTCCAAAGAAACTTGGAGGACAATGGGTCATCTTTTTCTCTATCATCAACAACTACCTCTCTTTCTTTTATAACTTAA

Protein Analysis

441

Amino Acids

49.54

Weight (kDa)

6.4

Isoelectric Point (pI)

55.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1316
AccB7I CCANNNNNTGG 1 cut(s) 739
AccBSI CCGCTC 1 cut(s) 1227
AccI GTMKAC 1 cut(s) 819
AccII CGCG 1 cut(s) 117
AccIII TCCGGA 1 cut(s) 584
AclWI GGATC 4 cut(s) 750, 1007, 1020, 1242
AcsI RAATTY 2 cut(s) 184, 1159
AfaI GTAC 5 cut(s) 397, 402, 524, 596, 665
AfiI CCNNNNNNNGG 4 cut(s) 51, 188, 532, 739
AflIII ACRYGT 1 cut(s) 115
AgsI TTSAA 3 cut(s) 257, 440, 519
AhdI GACNNNNNGTC 1 cut(s) 1270
AjnI CCWGG 4 cut(s) 78, 230, 391, 458
AloI GAACNNNNNNTCC 2 cut(s) 1133, 1165
AluBI AGCT 8 cut(s) 210, 260, 371, 638, 925, 1081, 1184, 1197
AluI AGCT 8 cut(s) 210, 260, 371, 638, 925, 1081, 1184, 1197
Alw21I GWGCWC 3 cut(s) 834, 882, 1035
Alw44I GTGCAC 2 cut(s) 830, 878
AlwI GGATC 4 cut(s) 750, 1007, 1020, 1242
AlwNI CAGNNNCTG 1 cut(s) 638
Aor13HI TCCGGA 1 cut(s) 584
AoxI GGCC 3 cut(s) 53, 327, 453
ApaLI GTGCAC 2 cut(s) 830, 878
ApoI RAATTY 2 cut(s) 184, 1159
ArsI GACNNNNNNTTYG 4 cut(s) 1133, 1157, 1165, 1189
Asp700I GAANNNNTTC 1 cut(s) 580
AspLEI GCGC 2 cut(s) 50, 486
AspS9I GGNCC 6 cut(s) 9, 53, 243, 327, 389, 791
AsuC2I CCSGG 2 cut(s) 52, 247
AsuHPI GGTGA 1 cut(s) 220
AsuII TTCGAA 1 cut(s) 1152
AvaII GGWCC 4 cut(s) 9, 243, 389, 791
AxyI CCTNAGG 1 cut(s) 139
BaeGI GKGCMC 2 cut(s) 834, 882
BamHI GGATCC 1 cut(s) 1012
BbsI GAAGAC 1 cut(s) 1101
Bbv12I GWGCWC 3 cut(s) 834, 882, 1035
BccI CCATC 5 cut(s) 234, 552, 741, 1184, 1204
BceAI ACGGC 2 cut(s) 210, 326
BciT130I CCWGG 4 cut(s) 80, 232, 393, 460
BcnI CCSGG 2 cut(s) 52, 247
BfaI CTAG 3 cut(s) 368, 416, 473
BmcAI AGTACT 1 cut(s) 596
Bme1390I CCNGG 6 cut(s) 52, 80, 232, 247, 393, 460
Bme18I GGWCC 4 cut(s) 9, 243, 389, 791
BmeRI GACNNNNNGTC 1 cut(s) 1270
BmgT120I GGNCC 6 cut(s) 9, 53, 243, 327, 389, 791
BmiI GGNNCC 4 cut(s) 11, 328, 390, 1014
BmrFI CCNGG 6 cut(s) 52, 80, 232, 247, 393, 460
BmrI ACTGGG 1 cut(s) 9
BmsI GCATC 3 cut(s) 485, 550, 990
BmuI ACTGGG 1 cut(s) 9
BpiI GAAGAC 1 cut(s) 1101
Bpu10I CCTNAGC 1 cut(s) 1017
Bpu14I TTCGAA 1 cut(s) 1152
BpuMI CCSGG 2 cut(s) 52, 247
BsaJI CCNNGG 3 cut(s) 459, 526, 604
BsaWI WCCGGW 2 cut(s) 584, 1061
BsaXI ACNNNNNCTCC 4 cut(s) 481, 511, 1022, 1052
Bsc4I CCNNNNNNNGG 4 cut(s) 51, 188, 532, 739
Bse1I ACTGG 3 cut(s) 15, 1036, 1085
Bse21I CCTNAGG 1 cut(s) 139
Bse3DI GCAATG 2 cut(s) 479, 976
BseAI TCCGGA 1 cut(s) 584
BseBI CCWGG 4 cut(s) 80, 232, 393, 460
BseDI CCNNGG 3 cut(s) 459, 526, 604
BseGI GGATG 3 cut(s) 733, 1098, 1195
BseLI CCNNNNNNNGG 4 cut(s) 51, 188, 532, 739
BseMI GCAATG 2 cut(s) 479, 976
BseMII CTCAG 3 cut(s) 153, 1008, 1088
BseNI ACTGG 3 cut(s) 15, 1036, 1085
BseRI GAGGAG 2 cut(s) 505, 641
BseSI GKGCMC 2 cut(s) 834, 882
BseYI CCCAGC 2 cut(s) 1184, 1220
BsgI GTGCAG 1 cut(s) 1200
Bsh1236I CGCG 1 cut(s) 117
Bsh1285I CGRYCG 1 cut(s) 823
BshFI GGCC 3 cut(s) 55, 329, 455
BsiEI CGRYCG 1 cut(s) 823
BsiHKAI GWGCWC 3 cut(s) 834, 882, 1035
BsiSI CCGG 6 cut(s) 51, 56, 246, 487, 585, 1062
BslFI GGGAC 1 cut(s) 284
BslI CCNNNNNNNGG 4 cut(s) 51, 188, 532, 739
BsmFI GGGAC 1 cut(s) 284
BsmI GAATGC 1 cut(s) 175
BsnI GGCC 3 cut(s) 55, 329, 455
Bsp119I TTCGAA 1 cut(s) 1152
Bsp1286I GDGCHC 3 cut(s) 834, 882, 1035
Bsp13I TCCGGA 1 cut(s) 584
Bsp143I GATC 5 cut(s) 364, 742, 942, 1012, 1234
BspANI GGCC 3 cut(s) 55, 329, 455
BspCNI CTCAG 3 cut(s) 152, 1009, 1087
BspEI TCCGGA 1 cut(s) 584
BspFNI CGCG 1 cut(s) 117
BspLI GGNNCC 4 cut(s) 11, 328, 390, 1014
BspPI GGATC 4 cut(s) 750, 1007, 1020, 1242
BspQI GCTCTTC 1 cut(s) 34
BspT104I TTCGAA 1 cut(s) 1152
BsrBI CCGCTC 1 cut(s) 1227
BsrDI GCAATG 2 cut(s) 479, 976
BsrI ACTGG 3 cut(s) 15, 1036, 1085
BssECI CCNNGG 3 cut(s) 459, 526, 604
BssMI GATC 5 cut(s) 364, 742, 942, 1012, 1234
Bst2UI CCWGG 4 cut(s) 80, 232, 393, 460
Bst4CI ACNGT 2 cut(s) 400, 527
Bst6I CTCTTC 6 cut(s) 34, 122, 150, 336, 571, 1149
BstAPI GCANNNNNTGC 2 cut(s) 638, 886
BstBI TTCGAA 1 cut(s) 1152
BstC8I GCNNGC 2 cut(s) 199, 1023
BstDEI CTNAG 3 cut(s) 139, 1017, 1074
BstDSI CCRYGG 1 cut(s) 526
BstEII GGTNACC 1 cut(s) 226
BstF5I GGATG 3 cut(s) 733, 1098, 1195
BstFNI CGCG 1 cut(s) 117
BstHHI GCGC 2 cut(s) 50, 486
BstKTI GATC 5 cut(s) 367, 745, 945, 1015, 1237
BstMBI GATC 5 cut(s) 364, 742, 942, 1012, 1234
BstMCI CGRYCG 1 cut(s) 823
BstMWI GCNNNNNNNGC 7 cut(s) 207, 492, 638, 886, 901, 987, 1203
BstNI CCWGG 4 cut(s) 80, 232, 393, 460
BstNSI RCATGY 2 cut(s) 780, 1025
BstPI GGTNACC 1 cut(s) 226
BstSCI CCNGG 6 cut(s) 50, 78, 230, 245, 391, 458
BstSLI GKGCMC 2 cut(s) 834, 882
BstUI CGCG 1 cut(s) 117
BstV2I GAAGAC 1 cut(s) 1101
BstX2I RGATCY 1 cut(s) 1012
BstYI RGATCY 1 cut(s) 1012
Bsu36I CCTNAGG 1 cut(s) 139
BsuRI GGCC 3 cut(s) 55, 329, 455
BtgI CCRYGG 1 cut(s) 526
BtsCI GGATG 3 cut(s) 733, 1098, 1195
BtsI GCAGTG 3 cut(s) 70, 502, 687
BtsIMutI CAGTG 3 cut(s) 70, 502, 687
Cac8I GCNNGC 2 cut(s) 199, 1023
CaiI CAGNNNCTG 1 cut(s) 638
CfoI GCGC 2 cut(s) 50, 486
Cfr13I GGNCC 6 cut(s) 9, 53, 243, 327, 389, 791
CseI GACGC 1 cut(s) 64
Csp6I GTAC 5 cut(s) 396, 401, 523, 595, 664
CviAII CATG 3 cut(s) 282, 777, 1022
CviQI GTAC 5 cut(s) 396, 401, 523, 595, 664
DdeI CTNAG 3 cut(s) 139, 1017, 1074
DpnI GATC 5 cut(s) 366, 744, 944, 1014, 1236
DpnII GATC 5 cut(s) 364, 742, 942, 1012, 1234
DriI GACNNNNNGTC 1 cut(s) 1270
Eam1104I CTCTTC 6 cut(s) 34, 122, 150, 336, 571, 1149
Eam1105I GACNNNNNGTC 1 cut(s) 1270
EarI CTCTTC 6 cut(s) 34, 122, 150, 336, 571, 1149
EciI GGCGGA 3 cut(s) 98, 216, 1247
Eco32I GATATC 1 cut(s) 697
Eco47I GGWCC 4 cut(s) 9, 243, 389, 791
Eco81I CCTNAGG 1 cut(s) 139
Eco91I GGTNACC 1 cut(s) 226
EcoO109I RGGNCCY 3 cut(s) 9, 327, 389
EcoO65I GGTNACC 1 cut(s) 226
EcoRI GAATTC 1 cut(s) 184
EcoRII CCWGG 4 cut(s) 78, 230, 391, 458
EcoRV GATATC 1 cut(s) 697
FaeI CATG 3 cut(s) 285, 780, 1025
FaqI GGGAC 1 cut(s) 284
FatI CATG 3 cut(s) 281, 776, 1021
FauI CCCGC 2 cut(s) 420, 1220
FauNDI CATATG 2 cut(s) 613, 643
FblI GTMKAC 1 cut(s) 819
FokI GGATG 3 cut(s) 720, 1085, 1202
FspBI CTAG 3 cut(s) 368, 416, 473
GlaI GCGC 2 cut(s) 49, 485
GsaI CCCAGC 2 cut(s) 1188, 1224
HaeIII GGCC 3 cut(s) 55, 329, 455
HapII CCGG 6 cut(s) 51, 56, 246, 487, 585, 1062
HgaI GACGC 1 cut(s) 64
HhaI GCGC 2 cut(s) 50, 486
Hin1II CATG 3 cut(s) 285, 780, 1025
Hin6I GCGC 2 cut(s) 48, 484
HinP1I GCGC 2 cut(s) 48, 484
HincII GTYRAC 2 cut(s) 764, 820
HindII GTYRAC 2 cut(s) 764, 820
HinfI GANTC 7 cut(s) 61, 88, 570, 717, 752, 1072, 1214
HpaII CCGG 6 cut(s) 51, 56, 246, 487, 585, 1062
HphI GGTGA 1 cut(s) 220
Hpy166II GTNNAC 5 cut(s) 217, 764, 820, 832, 880
Hpy188I TCNGA 7 cut(s) 66, 93, 123, 575, 608, 757, 986
Hpy8I GTNNAC 5 cut(s) 217, 764, 820, 832, 880
HpyAV CCTTC 2 cut(s) 445, 780
HpyCH4III ACNGT 2 cut(s) 400, 527
HpyCH4IV ACGT 1 cut(s) 291
HpyF10VI GCNNNNNNNGC 7 cut(s) 207, 492, 638, 886, 901, 987, 1203
HpyF3I CTNAG 3 cut(s) 139, 1017, 1074
HpySE526I ACGT 1 cut(s) 291
Hsp92II CATG 3 cut(s) 285, 780, 1025
HspAI GCGC 2 cut(s) 48, 484
Kpn2I TCCGGA 1 cut(s) 584
Kzo9I GATC 5 cut(s) 364, 742, 942, 1012, 1234
LguI GCTCTTC 1 cut(s) 34
LmnI GCTCC 6 cut(s) 143, 215, 492, 1000, 1030, 1224
LweI GCATC 3 cut(s) 485, 550, 990
MaeI CTAG 3 cut(s) 368, 416, 473
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 3 cut(s) 226, 682, 1122
MalI GATC 5 cut(s) 366, 744, 944, 1014, 1236
MbiI CCGCTC 1 cut(s) 1227
MboI GATC 5 cut(s) 364, 742, 942, 1012, 1234
MfeI CAATTG 1 cut(s) 884
MflI RGATCY 1 cut(s) 1012
MhlI GDGCHC 3 cut(s) 834, 882, 1035
MluCI AATT 5 cut(s) 184, 435, 688, 884, 1159
MluI ACGCGT 1 cut(s) 115
MlyI GAGTC 2 cut(s) 726, 1066
MmeI TCCRAC 2 cut(s) 1025, 1098
MroI TCCGGA 1 cut(s) 584
MroXI GAANNNNTTC 1 cut(s) 580
MseI TTAA 2 cut(s) 378, 1321
MslI CAYNNNNRTG 3 cut(s) 360, 549, 1064
MspA1I CMGCKG 3 cut(s) 152, 638, 1184
MspI CCGG 6 cut(s) 51, 56, 246, 487, 585, 1062
MspR9I CCNGG 6 cut(s) 52, 80, 232, 247, 393, 460
MunI CAATTG 1 cut(s) 884
Mva1269I GAATGC 1 cut(s) 175
MvaI CCWGG 4 cut(s) 80, 232, 393, 460
MvnI CGCG 1 cut(s) 117
MwoI GCNNNNNNNGC 7 cut(s) 207, 492, 638, 886, 901, 987, 1203
NciI CCSGG 2 cut(s) 52, 247
NdeI CATATG 2 cut(s) 613, 643
NdeII GATC 5 cut(s) 364, 742, 942, 1012, 1234
NlaIII CATG 3 cut(s) 285, 780, 1025
NlaIV GGNNCC 4 cut(s) 11, 328, 390, 1014
NmuCI GTSAC 2 cut(s) 226, 682
NspI RCATGY 2 cut(s) 780, 1025
NspV TTCGAA 1 cut(s) 1152
PaeI GCATGC 1 cut(s) 1025
PciSI GCTCTTC 1 cut(s) 34
PctI GAATGC 1 cut(s) 175
PdmI GAANNNNTTC 1 cut(s) 580
PfeI GAWTC 5 cut(s) 61, 88, 570, 752, 1214
PflFI GACNNNGTC 1 cut(s) 716
PflMI CCANNNNNTGG 1 cut(s) 739
PleI GAGTC 2 cut(s) 725, 1066
PpsI GAGTC 2 cut(s) 725, 1066
PpuMI RGGWCCY 2 cut(s) 9, 389
PsiI TTATAA 1 cut(s) 1316
Psp5II RGGWCCY 2 cut(s) 9, 389
Psp6I CCWGG 4 cut(s) 78, 230, 391, 458
PspEI GGTNACC 1 cut(s) 226
PspFI CCCAGC 2 cut(s) 1184, 1220
PspGI CCWGG 4 cut(s) 78, 230, 391, 458
PspN4I GGNNCC 4 cut(s) 11, 328, 390, 1014
PspPI GGNCC 6 cut(s) 9, 53, 243, 327, 389, 791
PspPPI RGGWCCY 2 cut(s) 9, 389
PsrI GAACNNNNNNTAC 2 cut(s) 601, 633
PstNI CAGNNNCTG 1 cut(s) 638
PsuI RGATCY 1 cut(s) 1012
PsyI GACNNNGTC 1 cut(s) 716
PvuII CAGCTG 2 cut(s) 638, 1184
RsaI GTAC 5 cut(s) 397, 402, 524, 596, 665
RsaNI GTAC 5 cut(s) 396, 401, 523, 595, 664
RseI CAYNNNNRTG 3 cut(s) 360, 549, 1064
SalI GTCGAC 1 cut(s) 818
SapI GCTCTTC 1 cut(s) 34
SaqAI TTAA 2 cut(s) 378, 1321
Sau3AI GATC 5 cut(s) 364, 742, 942, 1012, 1234
Sau96I GGNCC 6 cut(s) 9, 53, 243, 327, 389, 791
ScaI AGTACT 1 cut(s) 596
SchI GAGTC 2 cut(s) 726, 1066
ScrFI CCNGG 6 cut(s) 52, 80, 232, 247, 393, 460
SduI GDGCHC 3 cut(s) 834, 882, 1035
SfaNI GCATC 3 cut(s) 485, 550, 990
SfuI TTCGAA 1 cut(s) 1152
SinI GGWCC 4 cut(s) 9, 243, 389, 791
SmiMI CAYNNNNRTG 3 cut(s) 360, 549, 1064
SphI GCATGC 1 cut(s) 1025
Sse9I AATT 5 cut(s) 184, 435, 688, 884, 1159
SspI AATATT 1 cut(s) 383
SspMI CTAG 3 cut(s) 368, 416, 473
StyD4I CCNGG 6 cut(s) 50, 78, 230, 245, 391, 458
TaaI ACNGT 2 cut(s) 400, 527
TaiI ACGT 1 cut(s) 294
TaqI TCGA 5 cut(s) 506, 782, 819, 1137, 1152
TasI AATT 5 cut(s) 184, 435, 688, 884, 1159
TatI WGTACW 3 cut(s) 400, 594, 663
TauI GCSGC 1 cut(s) 656
TfiI GAWTC 5 cut(s) 61, 88, 570, 752, 1214
Tru1I TTAA 2 cut(s) 378, 1321
Tru9I TTAA 2 cut(s) 378, 1321
TscAI CASTG 3 cut(s) 77, 502, 687
TseFI GTSAC 2 cut(s) 226, 682
Tsp45I GTSAC 2 cut(s) 226, 682
TspDTI ATGAA 3 cut(s) 17, 270, 947
TspGWI ACGGA 1 cut(s) 202
TspRI CASTG 3 cut(s) 77, 502, 687
Tth111I GACNNNGTC 1 cut(s) 716
Van91I CCANNNNNTGG 1 cut(s) 739
VneI GTGCAC 2 cut(s) 830, 878
VpaK11BI GGWCC 4 cut(s) 9, 243, 389, 791
XapI RAATTY 2 cut(s) 184, 1159
XceI RCATGY 2 cut(s) 780, 1025
XmiI GTMKAC 1 cut(s) 819
XmnI GAANNNNTTC 1 cut(s) 580
XspI CTAG 3 cut(s) 368, 416, 473
ZrmI AGTACT 1 cut(s) 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.