pycom03g18760

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
19639942 .. 19640309
368 bp
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UTR
Exon/CDS
Intron
pycom03g18760.2

Sequence Viewer

Length: 318 bp
ATGGAAATACATAAAATAGCAGAGGATGGTATTGTCCTCCACACTCGATTTCATACACTGAATTCTCAACTCCTGACATTTCAGTTTCCCCGGAAAATGGCAACCCAAATCACAAACGGCGATGGAGTCGCCAGAGTCTCCGCTCTCAACTGCATCGATCGCTCGAGCTCCGACACCCACCAATCCGTCTCTTTACTCAAACAGGTTAGTAACTTACGACTCCCGCATAAATTCTTCAACTTTTTTTTCTGGGTTTTGAAGATTTTATGTTTTTCTAATCTGGGTAGTGAAGAAAAACTGAGTTATGGGTTGCTTTAG

Protein Analysis

106

Amino Acids

12.0

Weight (kDa)

9.14

Isoelectric Point (pI)

34.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 143
AciI CCGC 2 cut(s) 141, 224
AcsI RAATTY 2 cut(s) 61, 230
AfiI CCNNNNNNNGG 1 cut(s) 97
AgsI TTSAA 2 cut(s) 238, 259
AluBI AGCT 1 cut(s) 168
AluI AGCT 1 cut(s) 168
Alw21I GWGCWC 1 cut(s) 170
Alw26I GTCTC 2 cut(s) 142, 193
Ama87I CYCGRG 1 cut(s) 163
ApoI RAATTY 2 cut(s) 61, 230
AsuC2I CCSGG 1 cut(s) 91
AvaI CYCGRG 1 cut(s) 163
BanII GRGCYC 1 cut(s) 170
Bbv12I GWGCWC 1 cut(s) 170
BccI CCATC 2 cut(s) 20, 116
BceAI ACGGC 1 cut(s) 133
BcnI CCSGG 1 cut(s) 91
BcoDI GTCTC 2 cut(s) 142, 193
Bme1390I CCNGG 1 cut(s) 91
BmeT110I CYCGRG 1 cut(s) 163
BmrFI CCNGG 1 cut(s) 91
BmsI GCATC 1 cut(s) 162
BpuMI CCSGG 1 cut(s) 91
Bsa29I ATCGAT 1 cut(s) 156
BsaJI CCNNGG 1 cut(s) 89
Bsc4I CCNNNNNNNGG 1 cut(s) 97
BseCI ATCGAT 1 cut(s) 156
BseDI CCNNGG 1 cut(s) 89
BseGI GGATG 1 cut(s) 31
BseLI CCNNNNNNNGG 1 cut(s) 97
BseMII CTCAG 1 cut(s) 290
Bsh1285I CGRYCG 1 cut(s) 160
BshVI ATCGAT 1 cut(s) 156
BsiEI CGRYCG 1 cut(s) 160
BsiHKAI GWGCWC 1 cut(s) 170
BsiHKCI CYCGRG 1 cut(s) 163
BsiSI CCGG 1 cut(s) 91
BslI CCNNNNNNNGG 1 cut(s) 97
BsmAI GTCTC 2 cut(s) 142, 193
BsmBI CGTCTC 1 cut(s) 193
BsoBI CYCGRG 1 cut(s) 163
Bsp1286I GDGCHC 1 cut(s) 170
Bsp143I GATC 1 cut(s) 157
BspACI CCGC 2 cut(s) 141, 224
BspCNI CTCAG 1 cut(s) 291
BspDI ATCGAT 1 cut(s) 156
BsrBI CCGCTC 1 cut(s) 143
BssECI CCNNGG 1 cut(s) 89
BssMI GATC 1 cut(s) 157
BstDEI CTNAG 1 cut(s) 299
BstF5I GGATG 1 cut(s) 31
BstKTI GATC 1 cut(s) 160
BstMAI GTCTC 2 cut(s) 142, 193
BstMBI GATC 1 cut(s) 157
BstMCI CGRYCG 1 cut(s) 160
BstMWI GCNNNNNNNGC 1 cut(s) 159
BstSCI CCNGG 1 cut(s) 89
Bsu15I ATCGAT 1 cut(s) 156
BsuTUI ATCGAT 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 135
BtsCI GGATG 1 cut(s) 31
BtsIMutI CAGTG 1 cut(s) 56
ClaI ATCGAT 1 cut(s) 156
CviJI RGCY 1 cut(s) 168
CviKI_1 RGCY 1 cut(s) 168
DdeI CTNAG 1 cut(s) 299
DpnI GATC 1 cut(s) 159
DpnII GATC 1 cut(s) 157
Ecl136II GAGCTC 1 cut(s) 168
Eco24I GRGCYC 1 cut(s) 170
Eco53kI GAGCTC 1 cut(s) 168
Eco88I CYCGRG 1 cut(s) 163
EcoICRI GAGCTC 1 cut(s) 168
EcoRI GAATTC 1 cut(s) 61
EcoT38I GRGCYC 1 cut(s) 170
Esp3I CGTCTC 1 cut(s) 193
FaiI YATR 5 cut(s) 12, 54, 228, 268, 306
FauI CCCGC 1 cut(s) 231
FokI GGATG 1 cut(s) 38
FriOI GRGCYC 1 cut(s) 170
HapII CCGG 1 cut(s) 91
HinfI GANTC 3 cut(s) 126, 135, 219
HpaII CCGG 1 cut(s) 91
Hpy188I TCNGA 1 cut(s) 172
Hpy188III TCNNGA 1 cut(s) 73
HpyCH4V TGCA 1 cut(s) 153
HpyF10VI GCNNNNNNNGC 1 cut(s) 159
HpyF3I CTNAG 1 cut(s) 299
Kzo9I GATC 1 cut(s) 157
LmnI GCTCC 1 cut(s) 173
LpnPI CCDG 6 cut(s) 86, 104, 145, 188, 235, 266
LweI GCATC 1 cut(s) 162
MaeIII GTNAC 1 cut(s) 209
MalI GATC 1 cut(s) 159
MbiI CCGCTC 1 cut(s) 143
MboI GATC 1 cut(s) 157
MboII GAAGA 3 cut(s) 226, 271, 302
MhlI GDGCHC 1 cut(s) 170
MluCI AATT 2 cut(s) 61, 230
MlyI GAGTC 3 cut(s) 135, 144, 213
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 2 cut(s) 16, 47
MspI CCGG 1 cut(s) 91
MspR9I CCNGG 1 cut(s) 91
MwoI GCNNNNNNNGC 1 cut(s) 159
NciI CCSGG 1 cut(s) 91
NdeII GATC 1 cut(s) 157
PaeR7I CTCGAG 1 cut(s) 163
Ple19I CGATCG 1 cut(s) 160
PleI GAGTC 3 cut(s) 134, 143, 213
PpsI GAGTC 3 cut(s) 134, 143, 213
Psp124BI GAGCTC 1 cut(s) 170
PspXI VCTCGAGB 1 cut(s) 163
PvuI CGATCG 1 cut(s) 160
SacI GAGCTC 1 cut(s) 170
Sau3AI GATC 1 cut(s) 157
SchI GAGTC 3 cut(s) 135, 144, 213
ScrFI CCNGG 1 cut(s) 91
SduI GDGCHC 1 cut(s) 170
SetI ASST 2 cut(s) 170, 207
SfaNI GCATC 1 cut(s) 162
Sfr274I CTCGAG 1 cut(s) 163
SlaI CTCGAG 1 cut(s) 163
SmlI CTYRAG 1 cut(s) 163
SmoI CTYRAG 1 cut(s) 163
Sse9I AATT 2 cut(s) 61, 230
SsiI CCGC 2 cut(s) 141, 224
SstI GAGCTC 1 cut(s) 170
StyD4I CCNGG 1 cut(s) 89
TaqI TCGA 3 cut(s) 46, 156, 164
TasI AATT 2 cut(s) 61, 230
TscAI CASTG 1 cut(s) 63
TspDTI ATGAA 1 cut(s) 41
TspGWI ACGGA 1 cut(s) 175
TspRI CASTG 1 cut(s) 63
XapI RAATTY 2 cut(s) 61, 230
XhoI CTCGAG 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.