pycom03g23360

Bromodomain and WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0003305
Physical Location & Seq
Forward (+)
23207695 .. 23213859
6165 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g23360.10

Sequence Viewer

Length: 2061 bp
ATGGATCCTCGGAAGTGTACTTTGTCTGGTGGTGCAACTTCTCTTGCTATGGCACCTCCAAGCATTTTGAATATGTTAAATGAGAAGGCTCAGTTTGAGAAAGAAGAGAGGGATACAGGTCATGTTGTCGAGGCTGGAGTCGATATAGACATTAGAGAGGTTTATTTTTTGATTATGCATTTTCTGTCTCTTGGGCCATGCCAGAGGACTTTCGAACAGTTTGGGAATGATCTTCTGGAACATCAGCTTCTACCTAGAAGGTTTCATGCTTGGTTTTCAAGGAGCAGAATAGGAAGTGACAATAGTAATGAGGATGCTACCTCTTTCCCATTGAGTTACAACAACTTGGTTGAAAGGTATCCTCATATAGAGAGAGATCACTTGGTAAAGCTTCTAAGGCAACTGCTACTGAGTATAGCCACTCCTTTACATGGCAAGGTTGGAAGAAGTACTCTGAATGCAGCTGATGTCCCTACATTACTGGGAACTGGTTCCTTCTCGCTTCTGGATAGTGATAGGAATAAGGAAAATAAGAGAGTTAAGCCCCTGCCAGCTCACCTGCGTTGGCCTTACATGCAGGCTGATCAAATTCATGGGCTTAGTTTAAGGGAAATTGGAGGAGGTTTCACAAAGCATCATCGAGCTCCATCCATTCGCTCTGCGTGTTATGCGATTGCTAAACCATCAACTATGGTGCAGAAGATGAACAACAAAAAGAAGCTACGGGGGCACCGTAATGCTGTCTACTGTGCCATTTTTGATCGGTCCGGGAGATATGTTATCACGGGTGCAGATGATCGGCTTGTGAAGATATGGTCAATGGAAACTGCACTTTGCTTGGCTAGCTGTCGTGGACATGAAGGAGACATTACTGACTTGGCTGTAAGTTCGAACAATGCTTTGGTGGCATCTGCTTCAAATGACTTTTCCATTCGAGTTTGGCGTTTGCCAGATGGATTTCCAATTTCAGTTCTTCAGGGGCATACTGGGGCTGTGACTGCTATTGCTTTTAGTCCCAGGCTTAGTGCTGTTTACCAACTTCTATCGTCATCAGATGATGGGACTTGTCGAATCTGGGATGCTAGGTCCTCCCAATGCCCGCTGCGAATATACATGCCAAAACCTTCAGAGACTTCAACAGGGAAGGGCAATGCTTTTGCAATCACTGGATCGTCCTCGAGCAATGGTCCACAGAGCCATCAAATACTTTGTTGTGCTTACAATGCCAATGGGACTGTTTTTGTCACTGGTAGCTCTGACACTTTTGCAAGGGTCTGGAATGCTTTAAAATCTAATACAGATAACTCAGAACAACCAATACATGAGATGGATGTACTGGCGGGCCACGAGAATGACGTGAATTATGTCCAATTCAGTGGTTGTGTCATTCCTTCAAAGTCTTCATTTTCTGACTCGGTCAAGGAGGAGAATAATGGGAAGTTCAAAAATTCCTGGTTTTGTCACAACAACATAGTTACCTGCTCTCGTGATGGCAGTGCCATTATATGGGTTCCAAGATCACACAAATTCCATGGGAAAGTTGGACGTTGGACACGTGCATATCATCTAAAAGTTCCACCTCCCCCACTACCTCCTCAGCCTCCTCGAGGAGGCCCACGTCAAAGATTTCTTCCCACCCCTCGTGGTGTTAACATGATTGTGTGGAGCCTGGATAACCGCTTTGTGCTTGCAGCTATCATGGATTGCAGAATTTGTGTTTGGAATGCTGTTGATGGTAGCTTAGTACATTCTTTAACCGGTCACACTGCATCGTCTTATGTTTTGGATGTTCATCCCTTCAATCCTCGAATTGCTATGAGTGCTGGGTATGATGGGCAAACAATAGTTTGGGATATATGGGAGGGCGTGCCTATTAAGATATACGAACTTGGACATGTAAAGTTGGTTGATGGGAAGTTTTCGGCGGACGGTACATCAATAGTACTTTCAGATGACGTTGGCCAAATATATTTAATAAACACAGGTGAAGGCGAGTCTCAAAAAGATGCTGAATATCGATCAGTTCTTCCTTGGGGATTATCGCCCCCTTGCACGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001932 GO:0001934 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007010 GO:0007088 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007346 GO:0008104 GO:0008150 GO:0008284 GO:0008286 GO:0008360 GO:0009719 GO:0009725 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010564 GO:0010604 GO:0010628 GO:0010638 GO:0010646 GO:0010647 GO:0010648 GO:0010799 GO:0010800 GO:0010941 GO:0015031 GO:0015833 GO:0016043 GO:0017038 GO:0019219 GO:0019220 GO:0019222 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033043 GO:0033135 GO:0033138 GO:0033365 GO:0034504 GO:0034613 GO:0040008 GO:0042127 GO:0042221 GO:0042325 GO:0042327 GO:0042393 GO:0042886 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043434 GO:0043567 GO:0043568 GO:0044424 GO:0044464 GO:0045184 GO:0045787 GO:0045840 GO:0045893 GO:0045931 GO:0045935 GO:0045937 GO:0045944 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051781 GO:0051783 GO:0051785 GO:0060255 GO:0060548 GO:0065007 GO:0065008 GO:0070577 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090068 GO:0140030 GO:0140033 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141 GO:2001233 GO:2001234 GO:2001236 GO:2001237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Auxin_resp Bromodomain WD40

Protein Analysis

687

Amino Acids

75.81

Weight (kDa)

8.58

Isoelectric Point (pI)

38.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 567
AbsI CCTCGAGG 1 cut(s) 1605
Acc36I ACCTGC 2 cut(s) 567, 1487
AccB1I GGYRCC 2 cut(s) 52, 729
AccB7I CCANNNNNTGG 1 cut(s) 1506
AccI GTMKAC 1 cut(s) 744
AciI CCGC 4 cut(s) 1100, 1340, 1678, 1925
AclWI GGATC 2 cut(s) 12, 1177
AcoI YGGCCR 1 cut(s) 1960
AcsI RAATTY 4 cut(s) 588, 1447, 1526, 1710
AcuI CTGAAG 2 cut(s) 959, 1110
AcvI CACGTG 1 cut(s) 1556
AfaI GTAC 6 cut(s) 19, 451, 1335, 1746, 1933, 1944
AfiI CCNNNNNNNGG 6 cut(s) 431, 1506, 1607, 1610, 2053, 2054
AflIII ACRYGT 2 cut(s) 1553, 1894
AgeI ACCGGT 1 cut(s) 1757
AgsI TTSAA 8 cut(s) 70, 279, 353, 918, 1137, 1395, 1444, 1801
AjiI CACGTC 2 cut(s) 1357, 1619
AjnI CCWGG 3 cut(s) 1016, 1451, 1668
AjuI GAANNNNNNNTTGG 4 cut(s) 884, 916, 1702, 1734
Alw21I GWGCWC 1 cut(s) 646
Alw26I GTCTC 4 cut(s) 192, 858, 1124, 2001
AlwI GGATC 2 cut(s) 12, 1177
Ama87I CYCGRG 2 cut(s) 1177, 1605
AoxI GGCC 5 cut(s) 194, 566, 1342, 1612, 1960
ApeKI GCWGC 3 cut(s) 461, 1102, 1691
ApoI RAATTY 4 cut(s) 588, 1447, 1526, 1710
AsiGI ACCGGT 1 cut(s) 1757
Asp700I GAANNNNTTC 1 cut(s) 490
AspS9I GGNCC 6 cut(s) 194, 765, 1086, 1187, 1342, 1613
AsuC2I CCSGG 1 cut(s) 769
AsuHPI GGTGA 2 cut(s) 548, 1997
AsuII TTCGAA 2 cut(s) 213, 890
AsuNHI GCTAGC 1 cut(s) 842
AvaI CYCGRG 2 cut(s) 1177, 1605
AvaII GGWCC 3 cut(s) 765, 1086, 1187
BaeGI GKGCMC 1 cut(s) 732
BalI TGGCCA 1 cut(s) 1962
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 2 cut(s) 52, 729
BanII GRGCYC 1 cut(s) 646
BauI CACGAG 3 cut(s) 1346, 1485, 1641
BbrPI CACGTG 1 cut(s) 1556
BbsI GAAGAC 1 cut(s) 1392
Bbv12I GWGCWC 1 cut(s) 646
BbvCI CCTCAGC 1 cut(s) 1596
BbvI GCAGC 3 cut(s) 473, 1089, 1703
BciT130I CCWGG 3 cut(s) 1018, 1453, 1670
BciVI GTATCC 2 cut(s) 106, 369
BclI TGATCA 1 cut(s) 583
BcnI CCSGG 1 cut(s) 769
BcoDI GTCTC 4 cut(s) 192, 858, 1124, 2001
BfaI CTAG 3 cut(s) 255, 843, 1083
BfuAI ACCTGC 2 cut(s) 567, 1487
BfuI GTATCC 2 cut(s) 106, 369
BisI GCNGC 3 cut(s) 462, 1103, 1692
BlsI GCNGC 3 cut(s) 463, 1104, 1693
BmcAI AGTACT 2 cut(s) 451, 1944
Bme1390I CCNGG 4 cut(s) 769, 1018, 1453, 1670
Bme18I GGWCC 3 cut(s) 765, 1086, 1187
BmeT110I CYCGRG 2 cut(s) 1177, 1605
BmgBI CACGTC 2 cut(s) 1357, 1619
BmgT120I GGNCC 6 cut(s) 194, 765, 1086, 1187, 1342, 1613
BmiI GGNNCC 6 cut(s) 6, 54, 493, 731, 1512, 1667
BmrFI CCNGG 4 cut(s) 769, 1018, 1453, 1670
BmrI ACTGGG 2 cut(s) 491, 996
BmsI GCATC 6 cut(s) 304, 643, 917, 1069, 1778, 1996
BmtI GCTAGC 1 cut(s) 846
BmuI ACTGGG 2 cut(s) 491, 996
BpiI GAAGAC 1 cut(s) 1392
BpmI CTGGAG 1 cut(s) 156
Bpu10I CCTNAGC 1 cut(s) 1596
Bpu14I TTCGAA 2 cut(s) 213, 890
BpuMI CCSGG 1 cut(s) 769
Bsa29I ATCGAT 1 cut(s) 2017
BsaAI YACGTR 1 cut(s) 1556
BsaBI GATNNNNATC 1 cut(s) 1791
BsaJI CCNNGG 4 cut(s) 8, 1016, 1531, 2030
BsaWI WCCGGW 1 cut(s) 1757
Bsc4I CCNNNNNNNGG 6 cut(s) 431, 1506, 1607, 1610, 2053, 2054
Bse118I RCCGGY 1 cut(s) 1757
Bse1I ACTGG 6 cut(s) 486, 493, 991, 1171, 1252, 1341
Bse3DI GCAATG 2 cut(s) 1156, 1189
Bse8I GATNNNNATC 1 cut(s) 1791
BseBI CCWGG 3 cut(s) 1018, 1453, 1670
BseCI ATCGAT 1 cut(s) 2017
BseDI CCNNGG 4 cut(s) 8, 1016, 1531, 2030
BseGI GGATG 6 cut(s) 319, 647, 1084, 1336, 1792, 1792
BseJI GATNNNNATC 1 cut(s) 1791
BseLI CCNNNNNNNGG 6 cut(s) 431, 1506, 1607, 1610, 2053, 2054
BseMI GCAATG 2 cut(s) 1156, 1189
BseMII CTCAG 4 cut(s) 104, 401, 1320, 1610
BseNI ACTGG 6 cut(s) 486, 493, 991, 1171, 1252, 1341
BseRI GAGGAG 5 cut(s) 633, 1439, 1584, 1593, 1623
BseSI GKGCMC 1 cut(s) 732
BseXI GCAGC 3 cut(s) 473, 1089, 1703
BseYI CCCAGC 1 cut(s) 1823
BsgI GTGCAG 3 cut(s) 716, 810, 813
BshFI GGCC 5 cut(s) 196, 568, 1344, 1614, 1962
BshNI GGYRCC 2 cut(s) 52, 729
BshTI ACCGGT 1 cut(s) 1757
BshVI ATCGAT 1 cut(s) 2017
BsiHKAI GWGCWC 1 cut(s) 646
BsiHKCI CYCGRG 2 cut(s) 1177, 1605
BsiSI CCGG 2 cut(s) 768, 1758
BslFI GGGAC 4 cut(s) 455, 999, 1075, 1246
BslI CCNNNNNNNGG 6 cut(s) 431, 1506, 1607, 1610, 2053, 2054
BsmAI GTCTC 4 cut(s) 192, 858, 1124, 2001
BsmFI GGGAC 4 cut(s) 455, 999, 1075, 1246
BsmI GAATGC 3 cut(s) 463, 1285, 1729
BsnI GGCC 5 cut(s) 196, 568, 1344, 1614, 1962
BsoBI CYCGRG 2 cut(s) 1177, 1605
Bsp119I TTCGAA 2 cut(s) 213, 890
Bsp1286I GDGCHC 2 cut(s) 646, 732
Bsp143I GATC 9 cut(s) 4, 229, 376, 583, 760, 796, 1169, 1517, 2018
Bsp19I CCATGG 1 cut(s) 1531
BspACI CCGC 4 cut(s) 1100, 1340, 1678, 1925
BspANI GGCC 5 cut(s) 196, 568, 1344, 1614, 1962
BspCNI CTCAG 4 cut(s) 103, 402, 1319, 1609
BspDI ATCGAT 1 cut(s) 2017
BspLI GGNNCC 6 cut(s) 6, 54, 493, 731, 1512, 1667
BspMI ACCTGC 2 cut(s) 567, 1487
BspOI GCTAGC 1 cut(s) 846
BspPI GGATC 2 cut(s) 12, 1177
BspT104I TTCGAA 2 cut(s) 213, 890
BspT107I GGYRCC 2 cut(s) 52, 729
BsrDI GCAATG 2 cut(s) 1156, 1189
BsrFI RCCGGY 1 cut(s) 1757
BsrI ACTGG 6 cut(s) 486, 493, 991, 1171, 1252, 1341
BssAI RCCGGY 1 cut(s) 1757
BssECI CCNNGG 4 cut(s) 8, 1016, 1531, 2030
BssMI GATC 9 cut(s) 4, 229, 376, 583, 760, 796, 1169, 1517, 2018
BssSI CACGAG 3 cut(s) 1346, 1485, 1641
BssT1I CCWWGG 2 cut(s) 1531, 2030
Bst2BI CACGAG 3 cut(s) 1346, 1485, 1641
Bst2UI CCWGG 3 cut(s) 1018, 1453, 1670
Bst4CI ACNGT 5 cut(s) 219, 734, 749, 1237, 1931
Bst6I CTCTTC 1 cut(s) 99
BstBAI YACGTR 1 cut(s) 1556
BstBI TTCGAA 2 cut(s) 213, 890
BstC8I GCNNGC 7 cut(s) 552, 579, 844, 1100, 1342, 1689, 1868
BstDEI CTNAG 8 cut(s) 90, 395, 410, 599, 1022, 1306, 1596, 1741
BstDSI CCRYGG 1 cut(s) 1531
BstENI CCTNNNNNAGG 2 cut(s) 1605, 1608
BstF5I GGATG 6 cut(s) 319, 647, 1084, 1336, 1792, 1792
BstKTI GATC 9 cut(s) 7, 232, 379, 586, 763, 799, 1172, 1520, 2021
BstMAI GTCTC 4 cut(s) 192, 858, 1124, 2001
BstMBI GATC 9 cut(s) 4, 229, 376, 583, 760, 796, 1169, 1517, 2018
BstMWI GCNNNNNNNGC 9 cut(s) 397, 574, 668, 727, 843, 905, 998, 1223, 1820
BstNI CCWGG 3 cut(s) 1018, 1453, 1670
BstNSI RCATGY 3 cut(s) 577, 1117, 1898
BstSCI CCNGG 4 cut(s) 767, 1016, 1451, 1668
BstSLI GKGCMC 1 cut(s) 732
BstV1I GCAGC 3 cut(s) 473, 1089, 1703
BstV2I GAAGAC 1 cut(s) 1392
BstX2I RGATCY 1 cut(s) 4
BstXI CCANNNNNNTGG 1 cut(s) 1376
BstYI RGATCY 1 cut(s) 4
Bsu15I ATCGAT 1 cut(s) 2017
BsuI GTATCC 2 cut(s) 106, 369
BsuRI GGCC 5 cut(s) 196, 568, 1344, 1614, 1962
BsuTUI ATCGAT 1 cut(s) 2017
BtgI CCRYGG 1 cut(s) 1531
BtrI CACGTC 2 cut(s) 1357, 1619
BtsCI GGATG 6 cut(s) 319, 647, 1084, 1336, 1792, 1792
BtsI GCAGTG 2 cut(s) 1501, 1764
BtsIMutI CAGTG 5 cut(s) 1164, 1245, 1381, 1501, 1764
BveI ACCTGC 2 cut(s) 567, 1487
Cac8I GCNNGC 7 cut(s) 552, 579, 844, 1100, 1342, 1689, 1868
Cfr10I RCCGGY 1 cut(s) 1757
Cfr13I GGNCC 6 cut(s) 194, 765, 1086, 1187, 1342, 1613
ClaI ATCGAT 1 cut(s) 2017
CpoI CGGWCCG 1 cut(s) 765
Csp6I GTAC 6 cut(s) 18, 450, 1334, 1745, 1932, 1943
CspAI ACCGGT 1 cut(s) 1757
CspI CGGWCCG 1 cut(s) 765
CviQI GTAC 6 cut(s) 18, 450, 1334, 1745, 1932, 1943
DdeI CTNAG 8 cut(s) 90, 395, 410, 599, 1022, 1306, 1596, 1741
DpnI GATC 9 cut(s) 6, 231, 378, 585, 762, 798, 1171, 1519, 2020
DpnII GATC 9 cut(s) 4, 229, 376, 583, 760, 796, 1169, 1517, 2018
DraI TTTAAA 1 cut(s) 1287
EaeI YGGCCR 1 cut(s) 1960
Eam1104I CTCTTC 1 cut(s) 99
EarI CTCTTC 1 cut(s) 99
EciI GGCGGA 1 cut(s) 1940
Ecl136II GAGCTC 1 cut(s) 644
Eco130I CCWWGG 2 cut(s) 1531, 2030
Eco24I GRGCYC 1 cut(s) 646
Eco47I GGWCC 3 cut(s) 765, 1086, 1187
Eco53kI GAGCTC 1 cut(s) 644
Eco57I CTGAAG 2 cut(s) 959, 1110
Eco72I CACGTG 1 cut(s) 1556
Eco88I CYCGRG 2 cut(s) 1177, 1605
EcoICRI GAGCTC 1 cut(s) 644
EcoNI CCTNNNNNAGG 2 cut(s) 1605, 1608
EcoO109I RGGNCCY 1 cut(s) 1086
EcoRII CCWGG 3 cut(s) 1016, 1451, 1668
EcoT14I CCWWGG 2 cut(s) 1531, 2030
EcoT22I ATGCAT 1 cut(s) 180
EcoT38I GRGCYC 1 cut(s) 646
ErhI CCWWGG 2 cut(s) 1531, 2030
FaqI GGGAC 4 cut(s) 455, 999, 1075, 1246
FauI CCCGC 2 cut(s) 1107, 1333
FbaI TGATCA 1 cut(s) 583
FblI GTMKAC 1 cut(s) 744
Fnu4HI GCNGC 3 cut(s) 462, 1103, 1692
FokI GGATG 6 cut(s) 326, 634, 1091, 1343, 1779, 1799
FriOI GRGCYC 1 cut(s) 646
Fsp4HI GCNGC 3 cut(s) 462, 1103, 1692
FspBI CTAG 3 cut(s) 255, 843, 1083
GluI GCNGC 3 cut(s) 462, 1103, 1692
GsaI CCCAGC 1 cut(s) 1827
GsuI CTGGAG 1 cut(s) 156
HaeIII GGCC 5 cut(s) 196, 568, 1344, 1614, 1962
HapII CCGG 2 cut(s) 768, 1758
HincII GTYRAC 1 cut(s) 1651
HindII GTYRAC 1 cut(s) 1651
HindIII AAGCTT 1 cut(s) 389
HinfI GANTC 4 cut(s) 138, 1071, 1412, 1994
HpaI GTTAAC 1 cut(s) 1651
HpaII CCGG 2 cut(s) 768, 1758
HphI GGTGA 2 cut(s) 548, 1997
Hpy166II GTNNAC 6 cut(s) 18, 745, 854, 1033, 1190, 1651
Hpy188I TCNGA 8 cut(s) 12, 456, 1054, 1129, 1258, 1309, 1411, 1951
Hpy188III TCNNGA 4 cut(s) 236, 506, 1276, 1487
Hpy8I GTNNAC 6 cut(s) 18, 745, 854, 1033, 1190, 1651
HpyAV CCTTC 9 cut(s) 79, 252, 505, 854, 1134, 1138, 1401, 1807, 1982
HpyCH4III ACNGT 5 cut(s) 219, 734, 749, 1237, 1931
HpyCH4IV ACGT 5 cut(s) 1356, 1546, 1555, 1618, 1956
HpyF10VI GCNNNNNNNGC 9 cut(s) 397, 574, 668, 727, 843, 905, 998, 1223, 1820
HpyF3I CTNAG 8 cut(s) 90, 395, 410, 599, 1022, 1306, 1596, 1741
HpySE526I ACGT 5 cut(s) 1356, 1546, 1555, 1618, 1956
Ksp22I TGATCA 1 cut(s) 583
KspAI GTTAAC 1 cut(s) 1651
Kzo9I GATC 9 cut(s) 4, 229, 376, 583, 760, 796, 1169, 1517, 2018
LmnI GCTCC 3 cut(s) 282, 649, 1665
Lsp1109I GCAGC 3 cut(s) 473, 1089, 1703
LweI GCATC 6 cut(s) 304, 643, 917, 1069, 1778, 1996
MaeI CTAG 3 cut(s) 255, 843, 1083
MaeII ACGT 5 cut(s) 1356, 1546, 1555, 1618, 1956
MaeIII GTNAC 7 cut(s) 296, 335, 994, 1243, 1460, 1474, 1760
MalI GATC 9 cut(s) 6, 231, 378, 585, 762, 798, 1171, 1519, 2020
MboI GATC 9 cut(s) 4, 229, 376, 583, 760, 796, 1169, 1517, 2018
MboII GAAGA 9 cut(s) 116, 224, 456, 712, 820, 965, 1392, 1622, 2018
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 2 cut(s) 646, 732
MlsI TGGCCA 1 cut(s) 1962
MluCI AATT 9 cut(s) 588, 612, 963, 1360, 1370, 1447, 1526, 1710, 1809
MluNI TGGCCA 1 cut(s) 1962
MlyI GAGTC 3 cut(s) 147, 1406, 2003
MmeI TCCRAC 3 cut(s) 421, 1522, 1529
Mox20I TGGCCA 1 cut(s) 1962
Mph1103I ATGCAT 1 cut(s) 180
MroXI GAANNNNTTC 1 cut(s) 490
MscI TGGCCA 1 cut(s) 1962
MseI TTAA 8 cut(s) 77, 540, 605, 1286, 1650, 1754, 1875, 1973
MslI CAYNNNNRTG 3 cut(s) 735, 1350, 1658
Msp20I TGGCCA 1 cut(s) 1962
MspA1I CMGCKG 2 cut(s) 464, 1102
MspI CCGG 2 cut(s) 768, 1758
MspR9I CCNGG 4 cut(s) 769, 1018, 1453, 1670
Mva1269I GAATGC 3 cut(s) 463, 1285, 1729
MvaI CCWGG 3 cut(s) 1018, 1453, 1670
MwoI GCNNNNNNNGC 9 cut(s) 397, 574, 668, 727, 843, 905, 998, 1223, 1820
NciI CCSGG 1 cut(s) 769
NcoI CCATGG 1 cut(s) 1531
NdeII GATC 9 cut(s) 4, 229, 376, 583, 760, 796, 1169, 1517, 2018
NheI GCTAGC 1 cut(s) 842
NlaIV GGNNCC 6 cut(s) 6, 54, 493, 731, 1512, 1667
NmuCI GTSAC 5 cut(s) 296, 994, 1243, 1460, 1760
NsiI ATGCAT 1 cut(s) 180
NspI RCATGY 3 cut(s) 577, 1117, 1898
NspV TTCGAA 2 cut(s) 213, 890
PaeR7I CTCGAG 2 cut(s) 1177, 1605
PaqCI CACCTGC 1 cut(s) 567
PciI ACATGT 1 cut(s) 1894
PcsI WCGNNNNNNNCGW 4 cut(s) 730, 940, 1353, 1552
PctI GAATGC 3 cut(s) 463, 1285, 1729
PdmI GAANNNNTTC 1 cut(s) 490
PfeI GAWTC 1 cut(s) 1071
PflFI GACNNNGTC 1 cut(s) 1415
PflMI CCANNNNNTGG 1 cut(s) 1506
PfoI TCCNGGA 1 cut(s) 767
PinAI ACCGGT 1 cut(s) 1757
PkrI GCNGC 3 cut(s) 463, 1104, 1693
PleI GAGTC 3 cut(s) 146, 1406, 2002
PmaCI CACGTG 1 cut(s) 1556
PmlI CACGTG 1 cut(s) 1556
PpsI GAGTC 3 cut(s) 146, 1406, 2002
Ppu21I YACGTR 1 cut(s) 1556
PpuMI RGGWCCY 1 cut(s) 1086
PscI ACATGT 1 cut(s) 1894
Psp124BI GAGCTC 1 cut(s) 646
Psp5II RGGWCCY 1 cut(s) 1086
Psp6I CCWGG 3 cut(s) 1016, 1451, 1668
PspCI CACGTG 1 cut(s) 1556
PspFI CCCAGC 1 cut(s) 1823
PspGI CCWGG 3 cut(s) 1016, 1451, 1668
PspN4I GGNNCC 6 cut(s) 6, 54, 493, 731, 1512, 1667
PspPI GGNCC 6 cut(s) 194, 765, 1086, 1187, 1342, 1613
PspPPI RGGWCCY 1 cut(s) 1086
PspXI VCTCGAGB 2 cut(s) 1177, 1605
PsrI GAACNNNNNNTAC 2 cut(s) 1302, 1334
PsuI RGATCY 1 cut(s) 4
PsyI GACNNNGTC 1 cut(s) 1415
PvuII CAGCTG 1 cut(s) 464
RsaI GTAC 6 cut(s) 19, 451, 1335, 1746, 1933, 1944
RsaNI GTAC 6 cut(s) 18, 450, 1334, 1745, 1932, 1943
RseI CAYNNNNRTG 3 cut(s) 735, 1350, 1658
Rsr2I CGGWCCG 1 cut(s) 765
RsrII CGGWCCG 1 cut(s) 765
SacI GAGCTC 1 cut(s) 646
SaqAI TTAA 8 cut(s) 77, 540, 605, 1286, 1650, 1754, 1875, 1973
SatI GCNGC 3 cut(s) 462, 1103, 1692
Sau3AI GATC 9 cut(s) 4, 229, 376, 583, 760, 796, 1169, 1517, 2018
Sau96I GGNCC 6 cut(s) 194, 765, 1086, 1187, 1342, 1613
ScaI AGTACT 2 cut(s) 451, 1944
SchI GAGTC 3 cut(s) 147, 1406, 2003
ScrFI CCNGG 4 cut(s) 769, 1018, 1453, 1670
SduI GDGCHC 2 cut(s) 646, 732
SfaNI GCATC 6 cut(s) 304, 643, 917, 1069, 1778, 1996
Sfr274I CTCGAG 2 cut(s) 1177, 1605
SfuI TTCGAA 2 cut(s) 213, 890
SinI GGWCC 3 cut(s) 765, 1086, 1187
SlaI CTCGAG 2 cut(s) 1177, 1605
SmiMI CAYNNNNRTG 3 cut(s) 735, 1350, 1658
SmlI CTYRAG 2 cut(s) 1177, 1605
SmoI CTYRAG 2 cut(s) 1177, 1605
Sse9I AATT 9 cut(s) 588, 612, 963, 1360, 1370, 1447, 1526, 1710, 1809
SsiI CCGC 4 cut(s) 1100, 1340, 1678, 1925
SspMI CTAG 3 cut(s) 255, 843, 1083
SstI GAGCTC 1 cut(s) 646
StyD4I CCNGG 4 cut(s) 767, 1016, 1451, 1668
StyI CCWWGG 2 cut(s) 1531, 2030
TaaI ACNGT 5 cut(s) 219, 734, 749, 1237, 1931
TaiI ACGT 5 cut(s) 1359, 1549, 1558, 1621, 1959
TaqII GACCGA 2 cut(s) 753, 1405
TasI AATT 9 cut(s) 588, 612, 963, 1360, 1370, 1447, 1526, 1710, 1809
TatI WGTACW 5 cut(s) 17, 449, 1333, 1744, 1942
TfiI GAWTC 1 cut(s) 1071
Tru1I TTAA 8 cut(s) 77, 540, 605, 1286, 1650, 1754, 1875, 1973
Tru9I TTAA 8 cut(s) 77, 540, 605, 1286, 1650, 1754, 1875, 1973
TscAI CASTG 5 cut(s) 1171, 1252, 1381, 1501, 1771
TseFI GTSAC 5 cut(s) 296, 994, 1243, 1460, 1760
TseI GCWGC 3 cut(s) 461, 1102, 1691
Tsp45I GTSAC 5 cut(s) 296, 994, 1243, 1460, 1760
TspDTI ATGAA 6 cut(s) 254, 581, 719, 873, 1392, 1781
TspRI CASTG 5 cut(s) 1171, 1252, 1381, 1501, 1771
Tth111I GACNNNGTC 1 cut(s) 1415
Van91I CCANNNNNTGG 1 cut(s) 1506
VpaK11BI GGWCC 3 cut(s) 765, 1086, 1187
XagI CCTNNNNNAGG 2 cut(s) 1605, 1608
XapI RAATTY 4 cut(s) 588, 1447, 1526, 1710
XceI RCATGY 3 cut(s) 577, 1117, 1898
XcmI CCANNNNNNNNNTGG 1 cut(s) 1538
XhoI CTCGAG 2 cut(s) 1177, 1605
XmiI GTMKAC 1 cut(s) 744
XmnI GAANNNNTTC 1 cut(s) 490
XspI CTAG 3 cut(s) 255, 843, 1083
ZrmI AGTACT 2 cut(s) 451, 1944
Zsp2I ATGCAT 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.