Rmu_co8504919.1_g000001

Bromodomain and WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8504919.1
OG0003305
Physical Location & Seq
Forward (+)
37 .. 3171
3135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8504919.1_g000001.1.cds

Sequence Viewer

Length: 2649 bp
atgataggtatgattccatatccagagccataccagagtcaataccagcggcggcgacttggtgcattgggaatggagtggaaaccttcatcagtaaattttgcagttggcctggatattggtgcaggcatggactatcatttgcctcctttgcccgattgggagagagtgatagagccacttccagacttcatcgacgccttgctatgggagccagaaaatgaattcataagtgaagatactgattcagattttaatgtcactgaggaaaattctagtgaagatgagaaaggaaatattagcaccagctcttctagtgctccagaatgcagtgcagaagacagtgaagttggatgcagcaataaggatggccttcgcagatcaagaagaaaaacacaaaaggtcacctcttctgagagacgtgggaagaaaaggaatttgggtgaggaggatgggattatatctgggagtaatagaattaaaaatccaaaaagtggccgaaaagtttcaaagaggaactgtagagcaaaaacgtcaagaccccagagagttgcagcacggaatgctcgaaatgtgctttctcagaatccgggaacatctacagatggagaagaagatgactgggaagctgattcatcagatagtgagccacagcagaaaaagttccgtagtcaaagcaatgagtgtgatggaagcttccagaatatgcaagagttacagaataatgaaaaactatctcttcgtgagattcatgatatagccaatcctcttgctgttcctgactctcaaacaaatgttacaagaaaaaaattggttttgaagcttccgctccgtcgtgatttgaagaagcaagaagctccgcaggattcttcatcttctagatatcgcgaagtcggtcaagataagaagattaataatagctctgtggatggagcttcatctttggcagatgcacttgatgcgttctctggaaatttcatgagcaatgtatttacagatcctgggcaaaccgtagaggctgggtttcctttggaggcatcttcatgtgacatggagaacaaaattaggtggggagaggtcaagacacggacatcaaagcacacaagatcaggagatcccataccaattgatccagccgctgggtcgcttgtcagttctgaagtccatatggcagagaaaaatgtcgttcgggataaggaacatattagagagttttctcatgaatcaacgtcaaaaggttctggaataaaacactctgatgaatcaatggataatgcttcccttaagtttcttgcacaagaaacaggttctgggaacttaatgcctgaagatccttcatgcatggaccggaatttaaatctggaagtaccagaaatgggtggaggttctggcacattgagttcgtggagatttttctgcaaggataggacaaaaacagaagggtttgatggtaaattggaagaaaatacttctcgtatcaatgatcattatgatgcaggaatgaatctccctgaagctgcaactgattcagcacgcaggctaagaaccttaaagatcaaggcaacttcacgggaaccagactctgtgagccgtatccctaagtcgagagggggccagcaaaggacatctatagatgcagaagatccccctgccaaggtccgtgatacaagacttcagagatcaaggtccactagaaatcagtctgaccaaagtttgtcaacccaaaggttgttggataaccctgttggaaaactttcatggctgatgttgtctaaacacgaggaaggttaccgttatattcctcagctaggtgatgaagttgtatacttgagacagggtcatcaagagtatacggaattggctttgcagtcagatcaaggcccttggggtccgtggggatcaatgaaggaaaaaatcagagctgtggaaatctgcaaggttgtaggcctcgagtatgactccatgcctggttcaggggaaagctgtagcaagatcttattcagatttgtggagtcttcttctgccgtgtgtggtaaaaccttcaaattaacattgcctgaaattgactttaatgacttcatagttgagaaaagctggtatgatgccgccattggaagaaactgggcagcgggagaacactgtgaggtctggtggagagactcagatggaggcggagcgtggtggcaaggccgaattgtgcactgtcaggcgaaatctcatgagtttcctgatagcccgtggttaagatacgcggttaggtatgagaatgaagatgatatacctcataggcattgtccttgggaactgcatgatgtatccatgtcttgggaagcaccgcatattgatcatgaaagcagagataagctgcttcactatttttctaaatcggagaagaaggactttgaggccatccaacaaatgaatcaagctgttctgaaggtggatttctgcaacagctttcctgtccaattgtaccctgaactaatcaaagcaaggttaaagaatgactattataggagcttggaagcagtgaagcatgacataacccagatgctagaaaacgtccggcattacttcaagagaaataacttgcaagccaggattaagcacctttcaaaatggtttaagaaaaaaatttctaggatgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001932 GO:0001934 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007010 GO:0007088 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007346 GO:0008104 GO:0008150 GO:0008284 GO:0008286 GO:0008360 GO:0009719 GO:0009725 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010564 GO:0010604 GO:0010628 GO:0010638 GO:0010646 GO:0010647 GO:0010648 GO:0010799 GO:0010800 GO:0010941 GO:0015031 GO:0015833 GO:0016043 GO:0017038 GO:0019219 GO:0019220 GO:0019222 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033043 GO:0033135 GO:0033138 GO:0033365 GO:0034504 GO:0034613 GO:0040008 GO:0042127 GO:0042221 GO:0042325 GO:0042327 GO:0042393 GO:0042886 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043434 GO:0043567 GO:0043568 GO:0044424 GO:0044464 GO:0045184 GO:0045787 GO:0045840 GO:0045893 GO:0045931 GO:0045935 GO:0045937 GO:0045944 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051781 GO:0051783 GO:0051785 GO:0060255 GO:0060548 GO:0065007 GO:0065008 GO:0070577 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090068 GO:0140030 GO:0140033 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141 GO:2001233 GO:2001234 GO:2001236 GO:2001237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Auxin_resp Bromodomain WD40

Protein Analysis

882

Amino Acids

100.07

Weight (kDa)

6.13

Isoelectric Point (pI)

54.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 494, 1139, 2325
AccBSI CCGCTC 1 cut(s) 829
AccI GTMKAC 2 cut(s) 1824, 1850
AccII CGCG 2 cut(s) 888, 2252
AclWI GGATC 6 cut(s) 992, 1109, 1124, 1325, 1637, 1906
AcoI YGGCCR 1 cut(s) 496
AcsI RAATTY 7 cut(s) 97, 224, 271, 436, 973, 1351, 2634
AcuI CTGAAG 5 cut(s) 1179, 1347, 1533, 1658, 2456
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 2 cut(s) 1368, 2474
AfiI CCNNNNNNNGG 8 cut(s) 207, 494, 1139, 1376, 1654, 1808, 1973, 2325
AflII CTTAAG 1 cut(s) 1283
AgsI TTSAA 6 cut(s) 510, 820, 844, 2044, 2578, 2616
AjiI CACGTC 1 cut(s) 422
AjnI CCWGG 4 cut(s) 111, 1000, 1966, 2597
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
Alw21I GWGCWC 2 cut(s) 322, 2202
Alw26I GTCTC 3 cut(s) 412, 1825, 2151
Alw44I GTGCAC 1 cut(s) 2198
AlwI GGATC 6 cut(s) 992, 1109, 1124, 1325, 1637, 1906
AlwNI CAGNNNCTG 4 cut(s) 1001, 1139, 1310, 1583
Ama87I CYCGRG 1 cut(s) 1949
AoxI GGCC 8 cut(s) 109, 370, 496, 1612, 1879, 1945, 2188, 2406
ApaLI GTGCAC 1 cut(s) 2198
ApeKI GCWGC 5 cut(s) 357, 554, 1517, 2126, 2365
ApoI RAATTY 7 cut(s) 97, 224, 271, 436, 973, 1351, 2634
AseI ATTAAT 1 cut(s) 912
Asp700I GAANNNNTTC 3 cut(s) 505, 662, 1753
AspS9I GGNCC 6 cut(s) 1345, 1612, 1657, 1686, 1880, 1889
AsuC2I CCSGG 1 cut(s) 591
AsuHPI GGTGA 3 cut(s) 397, 455, 1823
AvaI CYCGRG 1 cut(s) 1949
AvaII GGWCC 4 cut(s) 1345, 1657, 1686, 1889
BaeGI GKGCMC 1 cut(s) 2202
BarI GAAGNNNNNNTAC 2 cut(s) 2262, 2294
BauI CACGAG 1 cut(s) 1778
BbsI GAAGAC 2 cut(s) 345, 2007
Bbv12I GWGCWC 2 cut(s) 322, 2202
BbvCI CCTCAGC 1 cut(s) 1803
BbvI GCAGC 5 cut(s) 369, 566, 1504, 2138, 2352
BccI CCATC 8 cut(s) 362, 446, 599, 683, 923, 1442, 2159, 2417
BceAI ACGGC 2 cut(s) 1575, 2009
BciT130I CCWGG 4 cut(s) 113, 1002, 1968, 2599
BciVI GTATCC 2 cut(s) 1604, 2326
BclI TGATCA 2 cut(s) 1483, 2344
BcnI CCSGG 1 cut(s) 591
BcoDI GTCTC 3 cut(s) 412, 1825, 2151
BfaI CTAG 7 cut(s) 276, 315, 879, 1692, 1808, 2555, 2640
BfmI CTRYAG 4 cut(s) 520, 600, 1629, 1984
BfrI CTTAAG 1 cut(s) 1283
BfuI GTATCC 2 cut(s) 1604, 2326
BglII AGATCT 1 cut(s) 1992
BisI GCNGC 9 cut(s) 50, 53, 358, 555, 1137, 1518, 2106, 2127, 2366
BlsI GCNGC 9 cut(s) 51, 54, 359, 556, 1138, 1519, 2107, 2128, 2367
Bme1390I CCNGG 5 cut(s) 113, 591, 1002, 1968, 2599
Bme18I GGWCC 4 cut(s) 1345, 1657, 1686, 1889
BmeT110I CYCGRG 1 cut(s) 1949
BmgBI CACGTC 1 cut(s) 422
BmgT120I GGNCC 6 cut(s) 1345, 1612, 1657, 1686, 1880, 1889
BmiI GGNNCC 4 cut(s) 213, 1575, 1613, 1890
BmrFI CCNGG 5 cut(s) 113, 591, 1002, 1968, 2599
BmrI ACTGGG 2 cut(s) 631, 2131
BmsI GCATC 8 cut(s) 344, 940, 949, 1046, 1483, 1624, 2092, 2541
BmuI ACTGGG 2 cut(s) 631, 2131
BpiI GAAGAC 2 cut(s) 345, 2007
BplI GAGNNNNNCTC 2 cut(s) 1943, 1975
BpmI CTGGAG 1 cut(s) 306
Bpu10I CCTNAGC 1 cut(s) 1803
BpuEI CTTGAG 1 cut(s) 1849
BpuMI CCSGG 1 cut(s) 591
BsaHI GRCGYC 1 cut(s) 198
BsaJI CCNNGG 6 cut(s) 1001, 1653, 1883, 1892, 2237, 2297
BsaWI WCCGGW 1 cut(s) 1347
Bsc4I CCNNNNNNNGG 8 cut(s) 207, 494, 1139, 1376, 1654, 1808, 1973, 2325
Bse1I ACTGG 2 cut(s) 626, 2126
Bse3DI GCAATG 3 cut(s) 685, 991, 2051
BseBI CCWGG 4 cut(s) 113, 1002, 1968, 2599
BseDI CCNNGG 6 cut(s) 1001, 1653, 1883, 1892, 2237, 2297
BseGI GGATG 6 cut(s) 359, 373, 457, 934, 2409, 2649
BseLI CCNNNNNNNGG 8 cut(s) 207, 494, 1139, 1376, 1654, 1808, 1973, 2325
BseMI GCAATG 3 cut(s) 685, 991, 2051
BseMII CTCAG 5 cut(s) 255, 405, 596, 1817, 2175
BseNI ACTGG 2 cut(s) 626, 2126
BseRI GAGGAG 1 cut(s) 461
BseSI GKGCMC 1 cut(s) 2202
BseXI GCAGC 5 cut(s) 369, 566, 1504, 2138, 2352
BseYI CCCAGC 2 cut(s) 1019, 1139
BsgI GTGCAG 2 cut(s) 144, 354
Bsh1236I CGCG 2 cut(s) 888, 2252
BshFI GGCC 8 cut(s) 111, 372, 498, 1614, 1881, 1947, 2190, 2408
BsiHKAI GWGCWC 2 cut(s) 322, 2202
BsiHKCI CYCGRG 1 cut(s) 1949
BsiSI CCGG 3 cut(s) 590, 1348, 2566
BslI CCNNNNNNNGG 8 cut(s) 207, 494, 1139, 1376, 1654, 1808, 1973, 2325
BsmAI GTCTC 3 cut(s) 412, 1825, 2151
BsmBI CGTCTC 1 cut(s) 412
BsmI GAATGC 2 cut(s) 332, 568
BsnI GGCC 8 cut(s) 111, 372, 498, 1614, 1881, 1947, 2190, 2408
BsoBI CYCGRG 1 cut(s) 1949
Bsp1286I GDGCHC 2 cut(s) 322, 2202
Bsp68I TCGCGA 1 cut(s) 888
BspANI GGCC 8 cut(s) 111, 372, 498, 1614, 1881, 1947, 2190, 2408
BspCNI CTCAG 5 cut(s) 256, 406, 595, 1816, 2174
BspFNI CGCG 2 cut(s) 888, 2252
BspHI TCATGA 5 cut(s) 751, 978, 1219, 2218, 2347
BspLI GGNNCC 4 cut(s) 213, 1575, 1613, 1890
BspPI GGATC 6 cut(s) 992, 1109, 1124, 1325, 1637, 1906
BspQI GCTCTTC 1 cut(s) 316
BspTI CTTAAG 1 cut(s) 1283
BsrBI CCGCTC 1 cut(s) 829
BsrDI GCAATG 3 cut(s) 685, 991, 2051
BsrI ACTGG 2 cut(s) 626, 2126
BssECI CCNNGG 6 cut(s) 1001, 1653, 1883, 1892, 2237, 2297
BssNAI GTATAC 2 cut(s) 1825, 1851
BssNI GRCGYC 1 cut(s) 198
BssSI CACGAG 1 cut(s) 1778
BssT1I CCWWGG 3 cut(s) 1653, 1883, 2297
Bst1107I GTATAC 2 cut(s) 1825, 1851
Bst2BI CACGAG 1 cut(s) 1778
Bst2UI CCWGG 4 cut(s) 113, 1002, 1968, 2599
Bst4CI ACNGT 6 cut(s) 344, 521, 1012, 1793, 2141, 2204
Bst6I CTCTTC 3 cut(s) 316, 415, 744
BstACI GRCGYC 1 cut(s) 198
BstAFI CTTAAG 1 cut(s) 1283
BstAPI GCANNNNNTGC 2 cut(s) 563, 959
BstC8I GCNNGC 5 cut(s) 127, 1534, 1538, 1616, 2595
BstDEI CTNAG 7 cut(s) 264, 414, 582, 1541, 1599, 1803, 2161
BstDSI CCRYGG 2 cut(s) 1892, 2237
BstEII GGTNACC 2 cut(s) 403, 1787
BstENI CCTNNNNNAGG 2 cut(s) 1806, 1971
BstF5I GGATG 6 cut(s) 359, 373, 457, 934, 2409, 2649
BstFNI CGCG 2 cut(s) 888, 2252
BstMAI GTCTC 3 cut(s) 412, 1825, 2151
BstMWI GCNNNNNNNGC 4 cut(s) 151, 211, 563, 959
BstNI CCWGG 4 cut(s) 113, 1002, 1968, 2599
BstPI GGTNACC 2 cut(s) 403, 1787
BstSCI CCNGG 5 cut(s) 111, 589, 1000, 1966, 2597
BstSFI CTRYAG 4 cut(s) 520, 600, 1629, 1984
BstSLI GKGCMC 1 cut(s) 2202
BstUI CGCG 2 cut(s) 888, 2252
BstV1I GCAGC 5 cut(s) 369, 566, 1504, 2138, 2352
BstV2I GAAGAC 2 cut(s) 345, 2007
BstX2I RGATCY 5 cut(s) 997, 1114, 1330, 1642, 1992
BstYI RGATCY 5 cut(s) 997, 1114, 1330, 1642, 1992
BstZ17I GTATAC 2 cut(s) 1825, 1851
BsuI GTATCC 2 cut(s) 1604, 2326
BsuRI GGCC 8 cut(s) 111, 372, 498, 1614, 1881, 1947, 2190, 2408
BtgI CCRYGG 2 cut(s) 1892, 2237
BtrI CACGTC 1 cut(s) 422
BtsCI GGATG 6 cut(s) 359, 373, 457, 934, 2409, 2649
BtsI GCAGTG 2 cut(s) 337, 2535
BtsIMutI CAGTG 6 cut(s) 261, 337, 349, 2137, 2200, 2535
BtuMI TCGCGA 1 cut(s) 888
Cac8I GCNNGC 5 cut(s) 127, 1534, 1538, 1616, 2595
CaiI CAGNNNCTG 4 cut(s) 1001, 1139, 1310, 1583
CciI TCATGA 5 cut(s) 751, 978, 1219, 2218, 2347
Cfr13I GGNCC 6 cut(s) 1345, 1612, 1657, 1686, 1880, 1889
CseI GACGC 1 cut(s) 206
Csp6I GTAC 2 cut(s) 1367, 2473
CviQI GTAC 2 cut(s) 1367, 2473
DdeI CTNAG 7 cut(s) 264, 414, 582, 1541, 1599, 1803, 2161
DraI TTTAAA 1 cut(s) 1356
EaeI YGGCCR 1 cut(s) 496
Eam1104I CTCTTC 3 cut(s) 316, 415, 744
EarI CTCTTC 3 cut(s) 316, 415, 744
EciI GGCGGA 1 cut(s) 2187
Eco130I CCWWGG 3 cut(s) 1653, 1883, 2297
Eco147I AGGCCT 1 cut(s) 1947
Eco32I GATATC 1 cut(s) 884
Eco47I GGWCC 4 cut(s) 1345, 1657, 1686, 1889
Eco57I CTGAAG 5 cut(s) 1179, 1347, 1533, 1658, 2456
Eco88I CYCGRG 1 cut(s) 1949
Eco91I GGTNACC 2 cut(s) 403, 1787
EcoNI CCTNNNNNAGG 2 cut(s) 1806, 1971
EcoO109I RGGNCCY 1 cut(s) 1880
EcoO65I GGTNACC 2 cut(s) 403, 1787
EcoRI GAATTC 1 cut(s) 224
EcoRII CCWGG 4 cut(s) 111, 1000, 1966, 2597
EcoRV GATATC 1 cut(s) 884
EcoT14I CCWWGG 3 cut(s) 1653, 1883, 2297
EcoT22I ATGCAT 1 cut(s) 1343
ErhI CCWWGG 3 cut(s) 1653, 1883, 2297
Esp3I CGTCTC 1 cut(s) 412
FalI AAGNNNNNCTT 2 cut(s) 2384, 2416
FauI CCCGC 1 cut(s) 2122
FauNDI CATATG 1 cut(s) 1167
FbaI TGATCA 2 cut(s) 1483, 2344
FblI GTMKAC 2 cut(s) 1824, 1850
Fnu4HI GCNGC 9 cut(s) 50, 53, 358, 555, 1137, 1518, 2106, 2127, 2366
FokI GGATG 5 cut(s) 366, 380, 464, 941, 2396
Fsp4HI GCNGC 9 cut(s) 50, 53, 358, 555, 1137, 1518, 2106, 2127, 2366
FspBI CTAG 7 cut(s) 276, 315, 879, 1692, 1808, 2555, 2640
GluI GCNGC 9 cut(s) 50, 53, 358, 555, 1137, 1518, 2106, 2127, 2366
GsaI CCCAGC 2 cut(s) 1023, 1143
GsuI CTGGAG 1 cut(s) 306
HaeIII GGCC 8 cut(s) 111, 372, 498, 1614, 1881, 1947, 2190, 2408
HapII CCGG 3 cut(s) 590, 1348, 2566
HgaI GACGC 1 cut(s) 206
Hin1I GRCGYC 1 cut(s) 198
HincII GTYRAC 1 cut(s) 1719
HindII GTYRAC 1 cut(s) 1719
HindIII AAGCTT 2 cut(s) 694, 821
HpaII CCGG 3 cut(s) 590, 1348, 2566
HphI GGTGA 3 cut(s) 397, 455, 1823
Hpy166II GTNNAC 5 cut(s) 1689, 1719, 1825, 1851, 2200
Hpy8I GTNNAC 5 cut(s) 1689, 1719, 1825, 1851, 2200
Hpy99I CGWCG 2 cut(s) 200, 837
HpyAV CCTTC 9 cut(s) 96, 383, 1344, 1433, 1778, 1900, 2050, 2389, 2431
HpyCH4III ACNGT 6 cut(s) 344, 521, 1012, 1793, 2141, 2204
HpyCH4IV ACGT 4 cut(s) 421, 533, 1229, 2562
HpyF10VI GCNNNNNNNGC 4 cut(s) 151, 211, 563, 959
HpyF3I CTNAG 7 cut(s) 264, 414, 582, 1541, 1599, 1803, 2161
HpySE526I ACGT 4 cut(s) 421, 533, 1229, 2562
Hsp92I GRCGYC 1 cut(s) 198
Ksp22I TGATCA 2 cut(s) 1483, 2344
LguI GCTCTTC 1 cut(s) 316
LmnI GCTCC 7 cut(s) 211, 325, 834, 862, 932, 2174, 2517
Lsp1109I GCAGC 5 cut(s) 369, 566, 1504, 2138, 2352
LweI GCATC 8 cut(s) 344, 940, 949, 1046, 1483, 1624, 2092, 2541
MaeI CTAG 7 cut(s) 276, 315, 879, 1692, 1808, 2555, 2640
MaeII ACGT 4 cut(s) 421, 533, 1229, 2562
MaeIII GTNAC 6 cut(s) 259, 403, 714, 796, 1046, 1787
MbiI CCGCTC 1 cut(s) 829
MfeI CAATTG 2 cut(s) 1125, 2468
MflI RGATCY 5 cut(s) 997, 1114, 1330, 1642, 1992
MhlI GDGCHC 2 cut(s) 322, 2202
MlyI GAGTC 6 cut(s) 46, 776, 1574, 1952, 2021, 2153
MmeI TCCRAC 4 cut(s) 331, 1713, 1726, 2437
Mph1103I ATGCAT 1 cut(s) 1343
MroXI GAANNNNTTC 3 cut(s) 505, 662, 1753
MslI CAYNNNNRTG 3 cut(s) 1042, 1257, 1491
MspA1I CMGCKG 3 cut(s) 49, 1139, 2129
MspCI CTTAAG 1 cut(s) 1283
MspI CCGG 3 cut(s) 590, 1348, 2566
MspR9I CCNGG 5 cut(s) 113, 591, 1002, 1968, 2599
MunI CAATTG 2 cut(s) 1125, 2468
Mva1269I GAATGC 2 cut(s) 332, 568
MvaI CCWGG 4 cut(s) 113, 1002, 1968, 2599
MvnI CGCG 2 cut(s) 888, 2252
MwoI GCNNNNNNNGC 4 cut(s) 151, 211, 563, 959
NciI CCSGG 1 cut(s) 591
NdeI CATATG 1 cut(s) 1167
NlaIV GGNNCC 4 cut(s) 213, 1575, 1613, 1890
NmuCI GTSAC 3 cut(s) 259, 403, 1046
NruI TCGCGA 1 cut(s) 888
NsiI ATGCAT 1 cut(s) 1343
PaeR7I CTCGAG 1 cut(s) 1949
PagI TCATGA 5 cut(s) 751, 978, 1219, 2218, 2347
PceI AGGCCT 1 cut(s) 1947
PciSI GCTCTTC 1 cut(s) 316
PcsI WCGNNNNNNNCGW 1 cut(s) 565
PctI GAATGC 2 cut(s) 332, 568
PdmI GAANNNNTTC 3 cut(s) 505, 662, 1753
PflFI GACNNNGTC 1 cut(s) 1836
PflMI CCANNNNNTGG 3 cut(s) 494, 1139, 2325
PfoI TCCNGGA 1 cut(s) 589
PkrI GCNGC 9 cut(s) 51, 54, 359, 556, 1138, 1519, 2107, 2128, 2367
PleI GAGTC 6 cut(s) 45, 776, 1574, 1952, 2020, 2153
PpsI GAGTC 6 cut(s) 45, 776, 1574, 1952, 2020, 2153
PshBI ATTAAT 1 cut(s) 912
Psp6I CCWGG 4 cut(s) 111, 1000, 1966, 2597
PspEI GGTNACC 2 cut(s) 403, 1787
PspFI CCCAGC 2 cut(s) 1019, 1139
PspGI CCWGG 4 cut(s) 111, 1000, 1966, 2597
PspN4I GGNNCC 4 cut(s) 213, 1575, 1613, 1890
PspPI GGNCC 6 cut(s) 1345, 1612, 1657, 1686, 1880, 1889
PspXI VCTCGAGB 1 cut(s) 1949
PstNI CAGNNNCTG 4 cut(s) 1001, 1139, 1310, 1583
PsuI RGATCY 5 cut(s) 997, 1114, 1330, 1642, 1992
PsyI GACNNNGTC 1 cut(s) 1836
RruI TCGCGA 1 cut(s) 888
RsaI GTAC 2 cut(s) 1368, 2474
RsaNI GTAC 2 cut(s) 1367, 2473
RseI CAYNNNNRTG 3 cut(s) 1042, 1257, 1491
SapI GCTCTTC 1 cut(s) 316
SatI GCNGC 9 cut(s) 50, 53, 358, 555, 1137, 1518, 2106, 2127, 2366
Sau96I GGNCC 6 cut(s) 1345, 1612, 1657, 1686, 1880, 1889
SchI GAGTC 6 cut(s) 46, 776, 1574, 1952, 2021, 2153
ScrFI CCNGG 5 cut(s) 113, 591, 1002, 1968, 2599
SduI GDGCHC 2 cut(s) 322, 2202
SfaNI GCATC 8 cut(s) 344, 940, 949, 1046, 1483, 1624, 2092, 2541
SfcI CTRYAG 4 cut(s) 520, 600, 1629, 1984
Sfr274I CTCGAG 1 cut(s) 1949
SinI GGWCC 4 cut(s) 1345, 1657, 1686, 1889
SlaI CTCGAG 1 cut(s) 1949
SmiI ATTTAAAT 1 cut(s) 1356
SmiMI CAYNNNNRTG 3 cut(s) 1042, 1257, 1491
SmlI CTYRAG 3 cut(s) 1283, 1828, 1949
SmoI CTYRAG 3 cut(s) 1283, 1828, 1949
SseBI AGGCCT 1 cut(s) 1947
SspI AATATT 1 cut(s) 298
SspMI CTAG 7 cut(s) 276, 315, 879, 1692, 1808, 2555, 2640
StuI AGGCCT 1 cut(s) 1947
StyD4I CCNGG 5 cut(s) 111, 589, 1000, 1966, 2597
StyI CCWWGG 3 cut(s) 1653, 1883, 2297
SwaI ATTTAAAT 1 cut(s) 1356
TaaI ACNGT 6 cut(s) 344, 521, 1012, 1793, 2141, 2204
TaiI ACGT 4 cut(s) 424, 536, 1232, 2565
TaqI TCGA 4 cut(s) 195, 568, 1604, 1950
TaqII GACCGA 1 cut(s) 884
TauI GCSGC 4 cut(s) 52, 55, 1139, 2108
TscAI CASTG 6 cut(s) 268, 337, 349, 2144, 2207, 2535
TseFI GTSAC 3 cut(s) 259, 403, 1046
TseI GCWGC 5 cut(s) 357, 554, 1517, 2126, 2365
Tsp45I GTSAC 3 cut(s) 259, 403, 1046
TspGWI ACGGA 7 cut(s) 574, 656, 821, 1102, 1649, 1868, 1881
TspRI CASTG 6 cut(s) 268, 337, 349, 2144, 2207, 2535
Tth111I GACNNNGTC 1 cut(s) 1836
Van91I CCANNNNNTGG 3 cut(s) 494, 1139, 2325
Vha464I CTTAAG 1 cut(s) 1283
VneI GTGCAC 1 cut(s) 2198
VpaK11BI GGWCC 4 cut(s) 1345, 1657, 1686, 1889
VspI ATTAAT 1 cut(s) 912
XagI CCTNNNNNAGG 2 cut(s) 1806, 1971
XapI RAATTY 7 cut(s) 97, 224, 271, 436, 973, 1351, 2634
XbaI TCTAGA 1 cut(s) 878
XhoI CTCGAG 1 cut(s) 1949
XmiI GTMKAC 2 cut(s) 1824, 1850
XmnI GAANNNNTTC 3 cut(s) 505, 662, 1753
XspI CTAG 7 cut(s) 276, 315, 879, 1692, 1808, 2555, 2640
Zsp2I ATGCAT 1 cut(s) 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.