pycom04g02590

Signal peptide peptidase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
2290560 .. 2297921
7362 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g02590.11

Sequence Viewer

Length: 1617 bp
ATGGCAATGGCGTCGGGTCTTCTCCGCCTTGTGTTTCTGTTATCTCTGATTGCTCTTTCTTTGGCCCGTGGTGAAAAGGACATGGTTTTGGATGTGGATTCCACCCCCGACACTCCTTCCTGCAGCAACCCTTACCTAATGGCAAAGGTTAAGAATTGGGTTAATGGCCATGAAGGAGAAACTATTGAAGGGGCAGGTGCAAAGTTTGGGGCTTTATTGCCTTCCAAAGAAGAAAAAGCCGTCCAATTGCCCGTTGTTATCTCGAATCCCTTAAATGGTTGTTCAGCGTCATCTTCGAAGTTATCTGGAGCTATTGCCTTGTCCACGCGTGGTGATTGTGACTTCTCCGTAAAGGCAGAAGTTGCACAGTCAGGAGGTGCTAAGGCGCTCGTGGTGATAAATAATGAAGAAGATCTTGCCAAGATGGCTTGTCCTGATAATAGCACTTCTTTGAATATTTCAATTTTTGTCGTAATGGTTCCGAAGTCAGATGGAGAAGCTCTCAAGAAATCTATTGAAGATGGAAAGAAAGTGGAGCTTCTATTATATTCTCCCAAGCGTCCAGTGGTGGACTACTCAGTTGTGTTCCTCTGGCTGATGGCTGTTGGAACGATAATAGTTGCCTCATTTTGGTCAAAGATTACTGCTCCTGAGAAGTCTGATGAGAATTATAATGAACTAGCGGAAAAGGAATCTAATGCTGGAACAGCCAAAGATGATTCTGAGGACGAAGTCATGAATCTTAGTGTGGCAGGCGCTGTGTGTTTCGTCATAACAGCATCCACTTTTCTGTTGCTACTATATTTCTTTATGTCTACTTGGTTTATCTGGGTGCTGATTGTACTTTTCTGCATTGGTGGTATTGAGGGAATGCATAATTGTGTTCTGAGCCTGATTTTGAGAAAATGGAGAAGTGGTGGACAGAAGACGATAACTTTGCCTCTTCTGGATGAGGTTTCTATTCTCTCGCTTGTTGTATTGGCTTTCTGTGCGGCATTTGCAGTTTTCTGGGTTGTTACCCGGCGGGCATCATATTCATGGATTGGCCAAGATGTTCTTGGTATCTGCTTGATGATAACGGTCTTGCAAATTGCTCGATTGCCTAATATAAAGGTTGCTACCGTACTACTTTGTTGTGCATTTGTCTATGACATCTTTTGGGTATTCCTGTCACCCTTAATATTCAAAGATAGTGTCATGGTTACGGTTGCTAAGGGTGACAGCAGTGGTGAAGCCCTACCAATGCTTTTGAGAATCCCTCGCTTTTTTGACCCCTGGGGTGGTGTGAATATGATTGGCTTCGGGGACGTTCTGTTTCCTGGTTTGCTTATTGTATTTACTTACAGGTTTGACAAAGAAAATAAGAAGAGTGCGTTTAACGGATATTTTCCCTGGTTGTTAATTGGCTATGGAATTGGACTCGGTCTTACTTACCTGGGTTTGTATCTCATGAATGGCAACGGTCAGCCTGCACTCCTATATCTCGTTCCATGTACACTAGGTGTTACAGTGATTTTGGGACTGATAAGGCACGAGCTGAAACAACTCTGGGATTACGGCGCAGAGGTATCTCCATCGAGCGTTGAACCATCCGTAGACGCCAGTAGATCGGTCTGA

Protein Analysis

539

Amino Acids

58.48

Weight (kDa)

5.21

Isoelectric Point (pI)

36.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 672
AarI CACCTGC 1 cut(s) 185
Acc36I ACCTGC 1 cut(s) 185
AccI GTMKAC 2 cut(s) 815, 1596
AccII CGCG 1 cut(s) 328
AciI CCGC 4 cut(s) 25, 683, 992, 1024
AcoI YGGCCR 2 cut(s) 166, 1045
AcyI GRCGYC 2 cut(s) 11, 1599
AdeI CACNNNGTG 1 cut(s) 1502
AfaI GTAC 3 cut(s) 843, 1125, 1495
AfiI CCNNNNNNNGG 3 cut(s) 275, 630, 1280
AflIII ACRYGT 1 cut(s) 326
AgsI TTSAA 6 cut(s) 188, 454, 462, 518, 1186, 1586
AjnI CCWGG 4 cut(s) 1274, 1318, 1391, 1434
AluBI AGCT 4 cut(s) 311, 500, 538, 1537
AluI AGCT 4 cut(s) 311, 500, 538, 1537
AlwNI CAGNNNCTG 1 cut(s) 758
AoxI GGCC 3 cut(s) 63, 166, 1045
ApeKI GCWGC 1 cut(s) 123
ArsI GACNNNNNNTTYG 4 cut(s) 919, 951, 1179, 1211
AspLEI GCGC 3 cut(s) 388, 758, 1562
AspS9I GGNCC 1 cut(s) 64
AsuC2I CCSGG 1 cut(s) 1021
AsuHPI GGTGA 6 cut(s) 83, 344, 406, 1164, 1229, 1241
AsuII TTCGAA 1 cut(s) 296
BalI TGGCCA 2 cut(s) 168, 1047
BauI CACGAG 2 cut(s) 389, 1532
BbsI GAAGAC 2 cut(s) 11, 932
BbvI GCAGC 1 cut(s) 135
BccI CCATC 6 cut(s) 418, 485, 515, 592, 1582, 1597
BceAI ACGGC 2 cut(s) 224, 1573
BcgI CGANNNNNNTGC 5 cut(s) 28, 919, 953, 1076, 1110
BciT130I CCWGG 4 cut(s) 1276, 1320, 1393, 1436
BcnI CCSGG 1 cut(s) 1021
BfaI CTAG 2 cut(s) 680, 1499
BfmI CTRYAG 1 cut(s) 121
BfoI RGCGCY 2 cut(s) 389, 759
BfuAI ACCTGC 1 cut(s) 185
BglI GCCNNNNNGGC 1 cut(s) 425
BglII AGATCT 1 cut(s) 412
BisI GCNGC 2 cut(s) 124, 993
BlsI GCNGC 2 cut(s) 125, 994
Bme1390I CCNGG 5 cut(s) 1021, 1276, 1320, 1393, 1436
BmgT120I GGNCC 1 cut(s) 64
BmiI GGNNCC 1 cut(s) 480
BmrFI CCNGG 5 cut(s) 1021, 1276, 1320, 1393, 1436
BmsI GCATC 2 cut(s) 788, 1037
BpiI GAAGAC 2 cut(s) 11, 932
BplI GAGNNNNNCTC 4 cut(s) 486, 518, 1243, 1275
BpmI CTGGAG 1 cut(s) 327
Bpu10I CCTNAGC 2 cut(s) 381, 1212
Bpu14I TTCGAA 1 cut(s) 296
BpuEI CTTGAG 1 cut(s) 488
BpuMI CCSGG 1 cut(s) 1021
BsaHI GRCGYC 2 cut(s) 11, 1599
BsaJI CCNNGG 5 cut(s) 67, 1274, 1275, 1391, 1435
BsaXI ACNNNNNCTCC 2 cut(s) 901, 931
Bsc4I CCNNNNNNNGG 3 cut(s) 275, 630, 1280
Bse1I ACTGG 2 cut(s) 563, 1602
Bse3DI GCAATG 1 cut(s) 12
BseBI CCWGG 4 cut(s) 1276, 1320, 1393, 1436
BseDI CCNNGG 5 cut(s) 67, 1274, 1275, 1391, 1435
BseGI GGATG 4 cut(s) 97, 779, 955, 1589
BseLI CCNNNNNNNGG 3 cut(s) 275, 630, 1280
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 4 cut(s) 591, 642, 714, 878
BseNI ACTGG 2 cut(s) 563, 1602
BseXI GCAGC 1 cut(s) 135
BsgI GTGCAG 1 cut(s) 1455
Bsh1236I CGCG 1 cut(s) 328
BshFI GGCC 3 cut(s) 65, 168, 1047
BsiSI CCGG 1 cut(s) 1021
BslFI GGGAC 2 cut(s) 1319, 1533
BslI CCNNNNNNNGG 3 cut(s) 275, 630, 1280
BsmFI GGGAC 2 cut(s) 1319, 1533
BsmI GAATGC 1 cut(s) 876
BsnI GGCC 3 cut(s) 65, 168, 1047
Bsp119I TTCGAA 1 cut(s) 296
Bsp1407I TGTACA 1 cut(s) 1493
Bsp143I GATC 2 cut(s) 412, 1607
BspACI CCGC 4 cut(s) 25, 683, 992, 1024
BspANI GGCC 3 cut(s) 65, 168, 1047
BspCNI CTCAG 4 cut(s) 590, 643, 715, 879
BspFNI CGCG 1 cut(s) 328
BspHI TCATGA 2 cut(s) 735, 1449
BspLI GGNNCC 1 cut(s) 480
BspMAI CTGCAG 1 cut(s) 125
BspMI ACCTGC 1 cut(s) 185
BspT104I TTCGAA 1 cut(s) 296
BsrDI GCAATG 1 cut(s) 12
BsrGI TGTACA 1 cut(s) 1493
BsrI ACTGG 2 cut(s) 563, 1602
BssECI CCNNGG 5 cut(s) 67, 1274, 1275, 1391, 1435
BssMI GATC 2 cut(s) 412, 1607
BssNI GRCGYC 2 cut(s) 11, 1599
BssSI CACGAG 2 cut(s) 389, 1532
Bst2BI CACGAG 2 cut(s) 389, 1532
Bst2UI CCWGG 4 cut(s) 1276, 1320, 1393, 1436
Bst4CI ACNGT 6 cut(s) 369, 1081, 1123, 1207, 1463, 1510
Bst6I CTCTTC 2 cut(s) 948, 1361
BstACI GRCGYC 2 cut(s) 11, 1599
BstAPI GCANNNNNTGC 1 cut(s) 362
BstAUI TGTACA 1 cut(s) 1493
BstBI TTCGAA 1 cut(s) 296
BstC8I GCNNGC 3 cut(s) 754, 1026, 1470
BstDEI CTNAG 7 cut(s) 381, 577, 651, 723, 743, 887, 1212
BstDSI CCRYGG 1 cut(s) 67
BstF5I GGATG 4 cut(s) 97, 779, 955, 1589
BstFNI CGCG 1 cut(s) 328
BstH2I RGCGCY 2 cut(s) 389, 759
BstHHI GCGC 3 cut(s) 388, 758, 1562
BstKTI GATC 2 cut(s) 415, 1610
BstMBI GATC 2 cut(s) 412, 1607
BstMWI GCNNNNNNNGC 5 cut(s) 362, 425, 707, 989, 998
BstNI CCWGG 4 cut(s) 1276, 1320, 1393, 1436
BstSCI CCNGG 5 cut(s) 1019, 1274, 1318, 1391, 1434
BstSFI CTRYAG 1 cut(s) 121
BstUI CGCG 1 cut(s) 328
BstV1I GCAGC 1 cut(s) 135
BstV2I GAAGAC 2 cut(s) 11, 932
BstX2I RGATCY 1 cut(s) 412
BstYI RGATCY 1 cut(s) 412
BsuRI GGCC 3 cut(s) 65, 168, 1047
BtgI CCRYGG 1 cut(s) 67
BtsCI GGATG 4 cut(s) 97, 779, 955, 1589
BtsI GCAGTG 1 cut(s) 1231
BtsIMutI CAGTG 3 cut(s) 570, 1231, 1515
BveI ACCTGC 1 cut(s) 185
Cac8I GCNNGC 3 cut(s) 754, 1026, 1470
CaiI CAGNNNCTG 1 cut(s) 758
CciI TCATGA 2 cut(s) 735, 1449
CfoI GCGC 3 cut(s) 388, 758, 1562
Cfr13I GGNCC 1 cut(s) 64
CseI GACGC 3 cut(s) 276, 548, 1607
Csp6I GTAC 3 cut(s) 842, 1124, 1494
CviAII CATG 7 cut(s) 82, 170, 736, 1038, 1198, 1450, 1491
CviQI GTAC 3 cut(s) 842, 1124, 1494
DdeI CTNAG 7 cut(s) 381, 577, 651, 723, 743, 887, 1212
DpnI GATC 2 cut(s) 414, 1609
DpnII GATC 2 cut(s) 412, 1607
DraIII CACNNNGTG 1 cut(s) 1502
EaeI YGGCCR 2 cut(s) 166, 1045
Eam1104I CTCTTC 2 cut(s) 948, 1361
EarI CTCTTC 2 cut(s) 948, 1361
EciI GGCGGA 1 cut(s) 14
EcoRII CCWGG 4 cut(s) 1274, 1318, 1391, 1434
EcoT22I ATGCAT 1 cut(s) 876
FaeI CATG 7 cut(s) 85, 173, 739, 1041, 1201, 1453, 1494
FalI AAGNNNNNCTT 6 cut(s) 399, 431, 522, 554, 1041, 1073
FaqI GGGAC 2 cut(s) 1319, 1533
FatI CATG 7 cut(s) 81, 169, 735, 1037, 1197, 1449, 1490
FauI CCCGC 1 cut(s) 1017
FblI GTMKAC 2 cut(s) 815, 1596
Fnu4HI GCNGC 2 cut(s) 124, 993
FokI GGATG 4 cut(s) 104, 766, 962, 1576
Fsp4HI GCNGC 2 cut(s) 124, 993
FspBI CTAG 2 cut(s) 680, 1499
GlaI GCGC 3 cut(s) 387, 757, 1561
GluI GCNGC 2 cut(s) 124, 993
GsuI CTGGAG 1 cut(s) 327
HaeII RGCGCY 2 cut(s) 389, 759
HaeIII GGCC 3 cut(s) 65, 168, 1047
HapII CCGG 1 cut(s) 1021
HgaI GACGC 3 cut(s) 276, 548, 1607
HhaI GCGC 3 cut(s) 388, 758, 1562
Hin1I GRCGYC 2 cut(s) 11, 1599
Hin1II CATG 7 cut(s) 85, 173, 739, 1041, 1201, 1453, 1494
Hin6I GCGC 3 cut(s) 386, 756, 1560
HinP1I GCGC 3 cut(s) 386, 756, 1560
HinfI GANTC 7 cut(s) 98, 265, 692, 719, 739, 1254, 1419
HpaII CCGG 1 cut(s) 1021
HphI GGTGA 6 cut(s) 83, 344, 406, 1164, 1229, 1241
Hpy166II GTNNAC 6 cut(s) 324, 571, 816, 920, 1496, 1597
Hpy188I TCNGA 7 cut(s) 48, 483, 490, 661, 724, 888, 1616
Hpy188III TCNNGA 9 cut(s) 262, 306, 372, 434, 505, 650, 736, 947, 1450
Hpy8I GTNNAC 6 cut(s) 324, 571, 816, 920, 1496, 1597
Hpy99I CGWCG 1 cut(s) 16
HpyAV CCTTC 4 cut(s) 126, 167, 182, 231
HpyCH4III ACNGT 6 cut(s) 369, 1081, 1123, 1207, 1463, 1510
HpyCH4IV ACGT 1 cut(s) 1308
HpyCH4V TGCA 9 cut(s) 123, 200, 365, 852, 874, 1001, 1087, 1139, 1472
HpyF10VI GCNNNNNNNGC 5 cut(s) 362, 425, 707, 989, 998
HpyF3I CTNAG 7 cut(s) 381, 577, 651, 723, 743, 887, 1212
HpySE526I ACGT 1 cut(s) 1308
Hsp92I GRCGYC 2 cut(s) 11, 1599
Hsp92II CATG 7 cut(s) 85, 173, 739, 1041, 1201, 1453, 1494
HspAI GCGC 3 cut(s) 386, 756, 1560
Kzo9I GATC 2 cut(s) 412, 1607
LmnI GCTCC 3 cut(s) 308, 535, 652
Lsp1109I GCAGC 1 cut(s) 135
LweI GCATC 2 cut(s) 788, 1037
MaeI CTAG 2 cut(s) 680, 1499
MaeII ACGT 1 cut(s) 1308
MaeIII GTNAC 6 cut(s) 338, 1015, 1170, 1201, 1217, 1504
MalI GATC 2 cut(s) 414, 1609
MboI GATC 2 cut(s) 412, 1607
MboII GAAGA 9 cut(s) 11, 242, 285, 419, 422, 530, 935, 937, 1378
MfeI CAATTG 1 cut(s) 245
MflI RGATCY 1 cut(s) 412
MlsI TGGCCA 2 cut(s) 168, 1047
MluCI AATT 8 cut(s) 154, 245, 462, 667, 877, 1089, 1401, 1413
MluI ACGCGT 1 cut(s) 326
MluNI TGGCCA 2 cut(s) 168, 1047
MlyI GAGTC 1 cut(s) 1413
MmeI TCCRAC 1 cut(s) 586
MnlI CCTC 9 cut(s) 368, 599, 634, 718, 859, 946, 951, 1269, 1558
Mox20I TGGCCA 2 cut(s) 168, 1047
Mph1103I ATGCAT 1 cut(s) 876
MscI TGGCCA 2 cut(s) 168, 1047
MseI TTAA 6 cut(s) 150, 162, 272, 1178, 1377, 1400
MslI CAYNNNNRTG 2 cut(s) 879, 1036
Msp20I TGGCCA 2 cut(s) 168, 1047
MspI CCGG 1 cut(s) 1021
MspR9I CCNGG 5 cut(s) 1021, 1276, 1320, 1393, 1436
MunI CAATTG 1 cut(s) 245
Mva1269I GAATGC 1 cut(s) 876
MvaI CCWGG 4 cut(s) 1276, 1320, 1393, 1436
MvnI CGCG 1 cut(s) 328
MwoI GCNNNNNNNGC 5 cut(s) 362, 425, 707, 989, 998
NciI CCSGG 1 cut(s) 1021
NdeII GATC 2 cut(s) 412, 1607
NlaIII CATG 7 cut(s) 85, 173, 739, 1041, 1201, 1453, 1494
NlaIV GGNNCC 1 cut(s) 480
NmuCI GTSAC 3 cut(s) 338, 1170, 1217
NsiI ATGCAT 1 cut(s) 876
NspV TTCGAA 1 cut(s) 296
PagI TCATGA 2 cut(s) 735, 1449
PaqCI CACCTGC 1 cut(s) 185
PasI CCCWGGG 1 cut(s) 1275
PctI GAATGC 1 cut(s) 876
PfeI GAWTC 6 cut(s) 98, 265, 692, 719, 739, 1254
PflFI GACNNNGTC 2 cut(s) 731, 1422
PkrI GCNGC 2 cut(s) 125, 994
PleI GAGTC 1 cut(s) 1413
PpsI GAGTC 1 cut(s) 1413
PsiI TTATAA 1 cut(s) 672
Psp6I CCWGG 4 cut(s) 1274, 1318, 1391, 1434
PspGI CCWGG 4 cut(s) 1274, 1318, 1391, 1434
PspN4I GGNNCC 1 cut(s) 480
PspPI GGNCC 1 cut(s) 64
PstI CTGCAG 1 cut(s) 125
PstNI CAGNNNCTG 1 cut(s) 758
PsuI RGATCY 1 cut(s) 412
PsyI GACNNNGTC 2 cut(s) 731, 1422
RsaI GTAC 3 cut(s) 843, 1125, 1495
RsaNI GTAC 3 cut(s) 842, 1124, 1494
RseI CAYNNNNRTG 2 cut(s) 879, 1036
SaqAI TTAA 6 cut(s) 150, 162, 272, 1178, 1377, 1400
SatI GCNGC 2 cut(s) 124, 993
Sau3AI GATC 2 cut(s) 412, 1607
Sau96I GGNCC 1 cut(s) 64
SchI GAGTC 1 cut(s) 1413
ScrFI CCNGG 5 cut(s) 1021, 1276, 1320, 1393, 1436
SfaNI GCATC 2 cut(s) 788, 1037
SfcI CTRYAG 1 cut(s) 121
SfuI TTCGAA 1 cut(s) 296
SmiMI CAYNNNNRTG 2 cut(s) 879, 1036
SmlI CTYRAG 1 cut(s) 503
SmoI CTYRAG 1 cut(s) 503
Sse9I AATT 8 cut(s) 154, 245, 462, 667, 877, 1089, 1401, 1413
SsiI CCGC 4 cut(s) 25, 683, 992, 1024
SspI AATATT 2 cut(s) 457, 1182
SspMI CTAG 2 cut(s) 680, 1499
StyD4I CCNGG 5 cut(s) 1019, 1274, 1318, 1391, 1434
TaaI ACNGT 6 cut(s) 369, 1081, 1123, 1207, 1463, 1510
TaiI ACGT 1 cut(s) 1311
TaqI TCGA 4 cut(s) 263, 296, 1096, 1577
TaqII GACCGA 2 cut(s) 1412, 1600
TasI AATT 8 cut(s) 154, 245, 462, 667, 877, 1089, 1401, 1413
TatI WGTACW 2 cut(s) 841, 1493
TauI GCSGC 1 cut(s) 995
TfiI GAWTC 6 cut(s) 98, 265, 692, 719, 739, 1254
Tru1I TTAA 6 cut(s) 150, 162, 272, 1178, 1377, 1400
Tru9I TTAA 6 cut(s) 150, 162, 272, 1178, 1377, 1400
TscAI CASTG 3 cut(s) 570, 1231, 1515
TseFI GTSAC 3 cut(s) 338, 1170, 1217
TseI GCWGC 1 cut(s) 123
Tsp45I GTSAC 3 cut(s) 338, 1170, 1217
TspDTI ATGAA 6 cut(s) 186, 420, 690, 752, 1026, 1466
TspGWI ACGGA 3 cut(s) 337, 1395, 1582
TspRI CASTG 3 cut(s) 570, 1231, 1515
Tth111I GACNNNGTC 2 cut(s) 731, 1422
XcmI CCANNNNNNNNNTGG 2 cut(s) 562, 1055
XmiI GTMKAC 2 cut(s) 815, 1596
XspI CTAG 2 cut(s) 680, 1499
Zsp2I ATGCAT 1 cut(s) 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.