Rmu_sc0001616.1_g000041

Signal peptide peptidase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001616.1
Physical Location & Seq
Reverse (-)
203321 .. 212599
9279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001616.1_g000041.1.cds

Sequence Viewer

Length: 1704 bp
atggcgccgtcgtcgtcgtcggtttttctccgtcttctgcttctgttatctctcactgctctatcgttcgccgacaattcaaaagactacatcttgggcaaggattccacccccaacaaaccctcctgcagcaacccttacctaatggtgaaggttaaaaggtgggttaatggcgacgaaggcaaaactgttgagggggttggtgcaaaatttggggctttgttgccttctaaacttgaaaaagctgtcaaattgcctgttgttctctccaaacccttcaatggctgctccaaatcctcttctcagttatctggagctattgccttgtccacacgcggtgattgtgacttctccgttaaggcacaagttgcacaagccggaggtgctaagggaccttgccatgatgggctgtcctgcgaacggcactttggatgtttcaaggcacaagttgcacaagccggaggtgctaaggggttgttggtgatgaatgataaagaagaccttgccatgatgggctgtcctgcaaacggcactttggatgtttcgatatttgttgcaatgattcaaaagtcagacggagaacatctcaagaaatctgttgaggatggaaataaagtggagcttctattatattctcccaagcgtccggtggtggactttggagttgcgtttttatggctgatggctgttggaacgataacaatggcctcatattggaaaacgattactgttgtcgagcaaaatgatgacccttacaaagaactagcagaaaaggattctatgagaacagcgaaagaagattctgaggacgaaaccatggttcttaatgtggcaggggctgtgtgttttgtaataaaagcatccacttttctgttgctactatacttttttatgtctacgtggtttgtgtgggtgctgatcgtacttttctgcattggcggtattcagggaatgcataatgttatctcaagcctgattttgagaacatggaaaagcggtggacggaagggaatacatgtgcctatttttgaagaggtctcttatctctcgcttgttatattgctcgtctctgtggcatttgcaattttctggtgtgtaacgcggcaggaatcatattcctggattggccaagatgttcttggtatctgcttgatgataacagtcttgcaaatcgctcaattacctaacatcaaggttgctacagtactactatgttgtgcatttatctacgacatcttttgggtattcgtgtcacccttattctttaaagacagcgtcatgattgcggttgctagaggtgacaaagctggtggtgaagccctaccaatgcttttgagagtccctaaattttttgacccctggggtggtcagaatatgattggctttggggacattctgtttccgggtttgcttattttatttactttcagatttgacaaagaaaacaagaagagtatgatcaatgggtattttctatggttgctaattggctatggaatggggcttttttttacgtacttgggcttgtacctcatgaatggcaatggtcagcctgcactcctctatcttgttccatgcacactaggtgttacagtgattttgggtttgataagaggtgagctgaaagaactttggagttatggcacagtgctatatccaactctgggtgattctggacaagacaatagatcagtgagagtttga

Protein Analysis

567

Amino Acids

62.15

Weight (kDa)

8.26

Isoelectric Point (pI)

33.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccI GTMKAC 1 cut(s) 896
AccII CGCG 2 cut(s) 336, 1102
AciI CCGC 5 cut(s) 336, 939, 996, 1102, 1286
AcoI YGGCCR 1 cut(s) 1126
AcsI RAATTY 2 cut(s) 209, 1346
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 2 cut(s) 338, 1586
AfaI GTAC 4 cut(s) 924, 1206, 1517, 1529
AfiI CCNNNNNNNGG 6 cut(s) 281, 420, 527, 714, 1364, 1664
AflIII ACRYGT 1 cut(s) 1015
AgsI TTSAA 6 cut(s) 81, 239, 280, 439, 566, 1031
AjnI CCWGG 2 cut(s) 1118, 1358
AjuI GAANNNNNNNTTGG 2 cut(s) 411, 443
AluBI AGCT 5 cut(s) 245, 317, 622, 1307, 1621
AluI AGCT 5 cut(s) 245, 317, 622, 1307, 1621
Alw26I GTCTC 2 cut(s) 1042, 1072
AlwNI CAGNNNCTG 1 cut(s) 839
AoxI GGCC 2 cut(s) 705, 1126
ApeKI GCWGC 2 cut(s) 129, 285
ApoI RAATTY 2 cut(s) 209, 1346
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 1 cut(s) 392
AsuC2I CCSGG 1 cut(s) 1404
AsuHPI GGTGA 8 cut(s) 160, 350, 493, 1245, 1310, 1325, 1628, 1679
AvaII GGWCC 1 cut(s) 392
BalI TGGCCA 1 cut(s) 1128
BanI GGYRCC 1 cut(s) 4
BbsI GAAGAC 2 cut(s) 26, 504
BbvI GCAGC 2 cut(s) 141, 272
BccI CCATC 4 cut(s) 398, 505, 599, 676
BceAI ACGGC 2 cut(s) 437, 544
BciT130I CCWGG 2 cut(s) 1120, 1360
BclI TGATCA 1 cut(s) 1458
BcnI CCSGG 1 cut(s) 1404
BcoDI GTCTC 2 cut(s) 1042, 1072
BfaI CTAG 3 cut(s) 764, 1293, 1583
BfmI CTRYAG 2 cut(s) 127, 1200
BfoI RGCGCY 1 cut(s) 8
BisI GCNGC 3 cut(s) 130, 286, 1103
BlsI GCNGC 3 cut(s) 131, 287, 1104
BmcAI AGTACT 1 cut(s) 1206
Bme1390I CCNGG 3 cut(s) 1120, 1360, 1404
Bme18I GGWCC 1 cut(s) 392
BmgT120I GGNCC 1 cut(s) 392
BmiI GGNNCC 2 cut(s) 6, 393
BmrFI CCNGG 3 cut(s) 1120, 1360, 1404
BmsI GCATC 1 cut(s) 869
BpiI GAAGAC 2 cut(s) 26, 504
BplI GAGNNNNNCTC 2 cut(s) 570, 602
BpmI CTGGAG 1 cut(s) 333
Bpu10I CCTNAGC 2 cut(s) 387, 468
BpuEI CTTGAG 2 cut(s) 572, 952
BpuMI CCSGG 1 cut(s) 1404
BsaAI YACGTR 2 cut(s) 900, 1515
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1042
BsaJI CCNNGG 3 cut(s) 816, 1358, 1359
BsaWI WCCGGW 1 cut(s) 646
BsaXI ACNNNNNCTCC 2 cut(s) 107, 137
Bsc4I CCNNNNNNNGG 6 cut(s) 281, 420, 527, 714, 1364, 1664
Bse3DI GCAATG 2 cut(s) 564, 1549
BseBI CCWGG 2 cut(s) 1120, 1360
BseDI CCNNGG 3 cut(s) 816, 1358, 1359
BseGI GGATG 4 cut(s) 437, 544, 610, 860
BseLI CCNNNNNNNGG 6 cut(s) 281, 420, 527, 714, 1364, 1664
BseMI GCAATG 2 cut(s) 564, 1549
BseMII CTCAG 2 cut(s) 317, 795
BseRI GAGGAG 1 cut(s) 1550
BseXI GCAGC 2 cut(s) 141, 272
BsgI GTGCAG 1 cut(s) 1539
Bsh1236I CGCG 2 cut(s) 336, 1102
BshFI GGCC 2 cut(s) 707, 1128
BshNI GGYRCC 1 cut(s) 4
BsiSI CCGG 4 cut(s) 378, 459, 647, 1403
BslFI GGGAC 3 cut(s) 405, 1325, 1403
BslI CCNNNNNNNGG 6 cut(s) 281, 420, 527, 714, 1364, 1664
BsmAI GTCTC 2 cut(s) 1042, 1072
BsmBI CGTCTC 1 cut(s) 1072
BsmFI GGGAC 3 cut(s) 405, 1325, 1403
BsmI GAATGC 1 cut(s) 957
BsnI GGCC 2 cut(s) 707, 1128
Bso31I GGTCTC 1 cut(s) 1042
Bsp143I GATC 3 cut(s) 918, 1458, 1688
Bsp19I CCATGG 1 cut(s) 816
BspACI CCGC 5 cut(s) 336, 939, 996, 1102, 1286
BspANI GGCC 2 cut(s) 707, 1128
BspCNI CTCAG 2 cut(s) 316, 796
BspFNI CGCG 2 cut(s) 336, 1102
BspHI TCATGA 2 cut(s) 1278, 1533
BspLI GGNNCC 2 cut(s) 6, 393
BspMAI CTGCAG 1 cut(s) 131
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 1042
BsrDI GCAATG 2 cut(s) 564, 1549
BssECI CCNNGG 3 cut(s) 816, 1358, 1359
BssMI GATC 3 cut(s) 918, 1458, 1688
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 816
Bst2UI CCWGG 2 cut(s) 1120, 1360
Bst4CI ACNGT 6 cut(s) 190, 730, 1162, 1204, 1594, 1648
Bst6I CTCTTC 3 cut(s) 304, 1026, 1445
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 2 cut(s) 368, 449
BstBAI YACGTR 2 cut(s) 900, 1515
BstC8I GCNNGC 1 cut(s) 1554
BstDEI CTNAG 4 cut(s) 303, 387, 468, 804
BstDSI CCRYGG 1 cut(s) 816
BstF5I GGATG 4 cut(s) 437, 544, 610, 860
BstFNI CGCG 2 cut(s) 336, 1102
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 3 cut(s) 921, 1461, 1691
BstMAI GTCTC 2 cut(s) 1042, 1072
BstMBI GATC 3 cut(s) 918, 1458, 1688
BstMWI GCNNNNNNNGC 5 cut(s) 180, 368, 383, 449, 464
BstNI CCWGG 2 cut(s) 1120, 1360
BstNSI RCATGY 1 cut(s) 1019
BstSCI CCNGG 3 cut(s) 1118, 1358, 1402
BstSFI CTRYAG 2 cut(s) 127, 1200
BstSNI TACGTA 1 cut(s) 1515
BstUI CGCG 2 cut(s) 336, 1102
BstV1I GCAGC 2 cut(s) 141, 272
BstV2I GAAGAC 2 cut(s) 26, 504
BsuRI GGCC 2 cut(s) 707, 1128
BtgI CCRYGG 1 cut(s) 816
BtsCI GGATG 4 cut(s) 437, 544, 610, 860
BtsI GCAGTG 1 cut(s) 54
BtsIMutI CAGTG 4 cut(s) 54, 1599, 1653, 1698
Cac8I GCNNGC 1 cut(s) 1554
CaiI CAGNNNCTG 1 cut(s) 839
CciI TCATGA 2 cut(s) 1278, 1533
CfoI GCGC 1 cut(s) 7
Cfr13I GGNCC 1 cut(s) 392
CseI GACGC 2 cut(s) 632, 1264
Csp6I GTAC 4 cut(s) 923, 1205, 1516, 1528
CspCI CAANNNNNGTGG 2 cut(s) 1291, 1326
CviAII CATG 8 cut(s) 401, 508, 817, 987, 1016, 1279, 1534, 1575
CviQI GTAC 4 cut(s) 923, 1205, 1516, 1528
DdeI CTNAG 4 cut(s) 303, 387, 468, 804
DinI GGCGCC 1 cut(s) 6
DpnI GATC 3 cut(s) 920, 1460, 1690
DpnII GATC 3 cut(s) 918, 1458, 1688
DraI TTTAAA 1 cut(s) 1267
DraIII CACNNNGTG 2 cut(s) 338, 1586
EaeI YGGCCR 1 cut(s) 1126
Eam1104I CTCTTC 3 cut(s) 304, 1026, 1445
EarI CTCTTC 3 cut(s) 304, 1026, 1445
Eco105I TACGTA 1 cut(s) 1515
Eco130I CCWWGG 1 cut(s) 816
Eco31I GGTCTC 1 cut(s) 1042
Eco47I GGWCC 1 cut(s) 392
EcoO109I RGGNCCY 1 cut(s) 392
EcoRII CCWGG 2 cut(s) 1118, 1358
EcoT14I CCWWGG 1 cut(s) 816
EcoT22I ATGCAT 1 cut(s) 957
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 816
Esp3I CGTCTC 1 cut(s) 1072
FaeI CATG 8 cut(s) 404, 511, 820, 990, 1019, 1282, 1537, 1578
FalI AAGNNNNNCTT 6 cut(s) 486, 518, 606, 638, 1122, 1154
FaqI GGGAC 3 cut(s) 405, 1325, 1403
FatI CATG 8 cut(s) 400, 507, 816, 986, 1015, 1278, 1533, 1574
FbaI TGATCA 1 cut(s) 1458
FblI GTMKAC 1 cut(s) 896
Fnu4HI GCNGC 3 cut(s) 130, 286, 1103
FokI GGATG 4 cut(s) 444, 551, 617, 847
Fsp4HI GCNGC 3 cut(s) 130, 286, 1103
FspBI CTAG 3 cut(s) 764, 1293, 1583
GlaI GCGC 1 cut(s) 6
GluI GCNGC 3 cut(s) 130, 286, 1103
GsuI CTGGAG 1 cut(s) 333
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 2 cut(s) 707, 1128
HapII CCGG 4 cut(s) 378, 459, 647, 1403
HgaI GACGC 2 cut(s) 632, 1264
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 8 cut(s) 404, 511, 820, 990, 1019, 1282, 1537, 1578
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HinfI GANTC 7 cut(s) 104, 562, 776, 800, 1109, 1338, 1670
HpaII CCGG 4 cut(s) 378, 459, 647, 1403
HphI GGTGA 8 cut(s) 160, 350, 493, 1245, 1310, 1325, 1628, 1679
Hpy166II GTNNAC 4 cut(s) 330, 655, 897, 1001
Hpy188I TCNGA 4 cut(s) 574, 805, 1371, 1430
Hpy188III TCNNGA 5 cut(s) 312, 589, 1279, 1534, 1674
Hpy8I GTNNAC 4 cut(s) 330, 655, 897, 1001
Hpy99I CGWCG 5 cut(s) 13, 16, 19, 22, 179
HpyAV CCTTC 5 cut(s) 145, 173, 237, 286, 1000
HpyCH4III ACNGT 6 cut(s) 190, 730, 1162, 1204, 1594, 1648
HpyCH4IV ACGT 2 cut(s) 899, 1514
HpyF10VI GCNNNNNNNGC 5 cut(s) 180, 368, 383, 449, 464
HpyF3I CTNAG 4 cut(s) 303, 387, 468, 804
HpySE526I ACGT 2 cut(s) 899, 1514
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 8 cut(s) 404, 511, 820, 990, 1019, 1282, 1537, 1578
HspAI GCGC 1 cut(s) 5
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 1 cut(s) 1458
Kzo9I GATC 3 cut(s) 918, 1458, 1688
LmnI GCTCC 3 cut(s) 293, 314, 619
Lsp1109I GCAGC 2 cut(s) 141, 272
LweI GCATC 1 cut(s) 869
MaeI CTAG 3 cut(s) 764, 1293, 1583
MaeII ACGT 2 cut(s) 899, 1514
MaeIII GTNAC 5 cut(s) 344, 1096, 1251, 1298, 1588
MalI GATC 3 cut(s) 920, 1460, 1690
MboI GATC 3 cut(s) 918, 1458, 1688
MboII GAAGA 6 cut(s) 26, 291, 509, 809, 1043, 1462
MlsI TGGCCA 1 cut(s) 1128
MluCI AATT 7 cut(s) 76, 209, 251, 1083, 1178, 1346, 1485
MluNI TGGCCA 1 cut(s) 1128
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1347
MmeI TCCRAC 2 cut(s) 670, 1682
Mox20I TGGCCA 1 cut(s) 1128
Mph1103I ATGCAT 1 cut(s) 957
MscI TGGCCA 1 cut(s) 1128
MseI TTAA 5 cut(s) 156, 168, 357, 825, 1266
Msp20I TGGCCA 1 cut(s) 1128
MspI CCGG 4 cut(s) 378, 459, 647, 1403
MspR9I CCNGG 3 cut(s) 1120, 1360, 1404
Mva1269I GAATGC 1 cut(s) 957
MvaI CCWGG 2 cut(s) 1120, 1360
MvnI CGCG 2 cut(s) 336, 1102
MwoI GCNNNNNNNGC 5 cut(s) 180, 368, 383, 449, 464
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 1404
NcoI CCATGG 1 cut(s) 816
NdeII GATC 3 cut(s) 918, 1458, 1688
NlaIII CATG 8 cut(s) 404, 511, 820, 990, 1019, 1282, 1537, 1578
NlaIV GGNNCC 2 cut(s) 6, 393
NmuCI GTSAC 3 cut(s) 344, 1251, 1298
NsiI ATGCAT 1 cut(s) 957
NspI RCATGY 1 cut(s) 1019
PagI TCATGA 2 cut(s) 1278, 1533
PasI CCCWGGG 1 cut(s) 1359
PciI ACATGT 1 cut(s) 1015
PctI GAATGC 1 cut(s) 957
PfeI GAWTC 6 cut(s) 104, 562, 776, 800, 1109, 1670
PflFI GACNNNGTC 1 cut(s) 1274
PfoI TCCNGGA 1 cut(s) 1118
PkrI GCNGC 3 cut(s) 131, 287, 1104
PleI GAGTC 1 cut(s) 1346
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 1346
Ppu21I YACGTR 2 cut(s) 900, 1515
PpuMI RGGWCCY 1 cut(s) 392
PscI ACATGT 1 cut(s) 1015
Psp5II RGGWCCY 1 cut(s) 392
Psp6I CCWGG 2 cut(s) 1118, 1358
PspGI CCWGG 2 cut(s) 1118, 1358
PspN4I GGNNCC 2 cut(s) 6, 393
PspPI GGNCC 1 cut(s) 392
PspPPI RGGWCCY 1 cut(s) 392
PstI CTGCAG 1 cut(s) 131
PstNI CAGNNNCTG 1 cut(s) 839
PsyI GACNNNGTC 1 cut(s) 1274
RsaI GTAC 4 cut(s) 924, 1206, 1517, 1529
RsaNI GTAC 4 cut(s) 923, 1205, 1516, 1528
SaqAI TTAA 5 cut(s) 156, 168, 357, 825, 1266
SatI GCNGC 3 cut(s) 130, 286, 1103
Sau3AI GATC 3 cut(s) 918, 1458, 1688
Sau96I GGNCC 1 cut(s) 392
ScaI AGTACT 1 cut(s) 1206
SchI GAGTC 1 cut(s) 1347
ScrFI CCNGG 3 cut(s) 1120, 1360, 1404
SfaNI GCATC 1 cut(s) 869
SfcI CTRYAG 2 cut(s) 127, 1200
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 1 cut(s) 392
SmlI CTYRAG 2 cut(s) 587, 967
SmoI CTYRAG 2 cut(s) 587, 967
SnaBI TACGTA 1 cut(s) 1515
Sse9I AATT 7 cut(s) 76, 209, 251, 1083, 1178, 1346, 1485
SsiI CCGC 5 cut(s) 336, 939, 996, 1102, 1286
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 3 cut(s) 764, 1293, 1583
StyD4I CCNGG 3 cut(s) 1118, 1358, 1402
StyI CCWWGG 1 cut(s) 816
TaaI ACNGT 6 cut(s) 190, 730, 1162, 1204, 1594, 1648
TaiI ACGT 2 cut(s) 902, 1517
TaqI TCGA 2 cut(s) 545, 735
TasI AATT 7 cut(s) 76, 209, 251, 1083, 1178, 1346, 1485
TatI WGTACW 1 cut(s) 1204
TauI GCSGC 1 cut(s) 1105
TfiI GAWTC 6 cut(s) 104, 562, 776, 800, 1109, 1670
Tru1I TTAA 5 cut(s) 156, 168, 357, 825, 1266
Tru9I TTAA 5 cut(s) 156, 168, 357, 825, 1266
TscAI CASTG 4 cut(s) 61, 1599, 1653, 1698
TseFI GTSAC 3 cut(s) 344, 1251, 1298
TseI GCWGC 2 cut(s) 129, 285
Tsp45I GTSAC 3 cut(s) 344, 1251, 1298
TspDTI ATGAA 2 cut(s) 500, 1550
TspGWI ACGGA 4 cut(s) 20, 343, 591, 1018
TspRI CASTG 4 cut(s) 61, 1599, 1653, 1698
Tth111I GACNNNGTC 1 cut(s) 1274
VpaK11BI GGWCC 1 cut(s) 392
XapI RAATTY 2 cut(s) 209, 1346
XceI RCATGY 1 cut(s) 1019
XcmI CCANNNNNNNNNTGG 2 cut(s) 646, 1136
XmiI GTMKAC 1 cut(s) 896
XspI CTAG 3 cut(s) 764, 1293, 1583
ZrmI AGTACT 1 cut(s) 1206
Zsp2I ATGCAT 1 cut(s) 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.