Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G43940 |
| fragaria_vesca | FvH4_6g25562 |
| pyrus_communis | pycom04g06860 pycom08g15580 |
| rosa_chinensis | RchiOBHm_Chr1g0321741 RchiOBHm_Chr4g0394881 RchiOBHm_Chr4g0426651 RchiOBHm_Chr6g0253621 |
| rosa_laevigata | RLG00000020413 |
| rosa_multiflora | Rmu_sc0003895.1_g000034 Rmu_sc0010958.1_g000004 Rmu_sc0011261.1_g000002 Rmu_ssc0000474.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00031210 Rroxscaffold_1G00048720 Rroxscaffold_2G00088920 Rroxscaffold_6G00409730 |
| rosa_rugosa | Rorug02G0371000 Rorug07G0091500 Rorug07G0252000 Rorug07G0286400 |
| rosa_wichuraiana | Rw5G037290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 332, 345 |
| AcsI | RAATTY | 1 cut(s) | 250 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 206 |
| AgsI | TTSAA | 2 cut(s) | 44, 276 |
| AjnI | CCWGG | 1 cut(s) | 332 |
| Alw21I | GWGCWC | 1 cut(s) | 404 |
| AlwI | GGATC | 2 cut(s) | 332, 345 |
| ApoI | RAATTY | 1 cut(s) | 250 |
| AsuHPI | GGTGA | 1 cut(s) | 41 |
| BamHI | GGATCC | 1 cut(s) | 337 |
| Bbv12I | GWGCWC | 1 cut(s) | 404 |
| BccI | CCATC | 2 cut(s) | 26, 368 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 163, 197 |
| BciT130I | CCWGG | 1 cut(s) | 334 |
| BclI | TGATCA | 1 cut(s) | 52 |
| BfaI | CTAG | 1 cut(s) | 405 |
| BlpI | GCTNAGC | 1 cut(s) | 303 |
| Bme1390I | CCNGG | 1 cut(s) | 334 |
| BmiI | GGNNCC | 1 cut(s) | 339 |
| BmrFI | CCNGG | 1 cut(s) | 334 |
| BmsI | GCATC | 1 cut(s) | 275 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 303 |
| BsaJI | CCNNGG | 3 cut(s) | 126, 200, 333 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseBI | CCWGG | 1 cut(s) | 334 |
| BseDI | CCNNGG | 3 cut(s) | 126, 200, 333 |
| BseGI | GGATG | 2 cut(s) | 159, 379 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseRI | GAGGAG | 2 cut(s) | 333, 336 |
| BsiHKAI | GWGCWC | 1 cut(s) | 404 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BsmI | GAATGC | 1 cut(s) | 109 |
| Bsp1286I | GDGCHC | 1 cut(s) | 404 |
| Bsp143I | GATC | 3 cut(s) | 52, 73, 337 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 303 |
| BspHI | TCATGA | 1 cut(s) | 145 |
| BspLI | GGNNCC | 1 cut(s) | 339 |
| BspPI | GGATC | 2 cut(s) | 332, 345 |
| BssECI | CCNNGG | 3 cut(s) | 126, 200, 333 |
| BssMI | GATC | 3 cut(s) | 52, 73, 337 |
| BssT1I | CCWWGG | 1 cut(s) | 200 |
| Bst2UI | CCWGG | 1 cut(s) | 334 |
| Bst6I | CTCTTC | 1 cut(s) | 380 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 399 |
| BstDEI | CTNAG | 1 cut(s) | 303 |
| BstF5I | GGATG | 2 cut(s) | 159, 379 |
| BstKTI | GATC | 3 cut(s) | 55, 76, 340 |
| BstMBI | GATC | 3 cut(s) | 52, 73, 337 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 399 |
| BstNI | CCWGG | 1 cut(s) | 334 |
| BstSCI | CCNGG | 1 cut(s) | 332 |
| BstX2I | RGATCY | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 337 |
| BtsCI | GGATG | 2 cut(s) | 159, 379 |
| CciI | TCATGA | 1 cut(s) | 145 |
| CviAII | CATG | 1 cut(s) | 146 |
| CviJI | RGCY | 2 cut(s) | 307, 332 |
| CviKI_1 | RGCY | 2 cut(s) | 307, 332 |
| DdeI | CTNAG | 1 cut(s) | 303 |
| DpnI | GATC | 3 cut(s) | 54, 75, 339 |
| DpnII | GATC | 3 cut(s) | 52, 73, 337 |
| Eam1104I | CTCTTC | 1 cut(s) | 380 |
| EarI | CTCTTC | 1 cut(s) | 380 |
| Eco130I | CCWWGG | 1 cut(s) | 200 |
| EcoRII | CCWGG | 1 cut(s) | 332 |
| EcoT14I | CCWWGG | 1 cut(s) | 200 |
| EcoT22I | ATGCAT | 1 cut(s) | 111 |
| ErhI | CCWWGG | 1 cut(s) | 200 |
| FaeI | CATG | 1 cut(s) | 149 |
| FaiI | YATR | 7 cut(s) | 57, 107, 147, 192, 238, 320, 357 |
| FatI | CATG | 1 cut(s) | 145 |
| FbaI | TGATCA | 1 cut(s) | 52 |
| FokI | GGATG | 2 cut(s) | 166, 386 |
| FspBI | CTAG | 1 cut(s) | 405 |
| Hin1II | CATG | 1 cut(s) | 149 |
| HinfI | GANTC | 4 cut(s) | 44, 94, 163, 272 |
| HphI | GGTGA | 1 cut(s) | 41 |
| Hpy188I | TCNGA | 1 cut(s) | 271 |
| Hpy188III | TCNNGA | 2 cut(s) | 146, 174 |
| Hpy99I | CGWCG | 1 cut(s) | 69 |
| HpyCH4V | TGCA | 4 cut(s) | 80, 109, 266, 289 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 399 |
| HpyF3I | CTNAG | 1 cut(s) | 303 |
| Hsp92II | CATG | 1 cut(s) | 149 |
| Ksp22I | TGATCA | 1 cut(s) | 52 |
| Kzo9I | GATC | 3 cut(s) | 52, 73, 337 |
| LpnPI | CCDG | 3 cut(s) | 319, 321, 346 |
| LweI | GCATC | 1 cut(s) | 275 |
| MaeI | CTAG | 1 cut(s) | 405 |
| MaeIII | GTNAC | 1 cut(s) | 20 |
| MalI | GATC | 3 cut(s) | 54, 75, 339 |
| MboI | GATC | 3 cut(s) | 52, 73, 337 |
| MboII | GAAGA | 2 cut(s) | 53, 397 |
| MfeI | CAATTG | 1 cut(s) | 98 |
| MflI | RGATCY | 1 cut(s) | 337 |
| MhlI | GDGCHC | 1 cut(s) | 404 |
| MluCI | AATT | 5 cut(s) | 10, 98, 250, 276, 352 |
| MnlI | CCTC | 5 cut(s) | 136, 240, 351, 354, 357 |
| Mph1103I | ATGCAT | 1 cut(s) | 111 |
| MseI | TTAA | 5 cut(s) | 86, 138, 254, 365, 424 |
| MspR9I | CCNGG | 1 cut(s) | 334 |
| MunI | CAATTG | 1 cut(s) | 98 |
| Mva1269I | GAATGC | 1 cut(s) | 109 |
| MvaI | CCWGG | 1 cut(s) | 334 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 399 |
| NdeII | GATC | 3 cut(s) | 52, 73, 337 |
| NlaIII | CATG | 1 cut(s) | 149 |
| NlaIV | GGNNCC | 1 cut(s) | 339 |
| NmuCI | GTSAC | 1 cut(s) | 20 |
| NsiI | ATGCAT | 1 cut(s) | 111 |
| PagI | TCATGA | 1 cut(s) | 145 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 73 |
| PctI | GAATGC | 1 cut(s) | 109 |
| PfeI | GAWTC | 4 cut(s) | 44, 94, 163, 272 |
| Psp6I | CCWGG | 1 cut(s) | 332 |
| PspGI | CCWGG | 1 cut(s) | 332 |
| PspN4I | GGNNCC | 1 cut(s) | 339 |
| PsuI | RGATCY | 1 cut(s) | 337 |
| SaqAI | TTAA | 5 cut(s) | 86, 138, 254, 365, 424 |
| Sau3AI | GATC | 3 cut(s) | 52, 73, 337 |
| ScrFI | CCNGG | 1 cut(s) | 334 |
| SduI | GDGCHC | 1 cut(s) | 404 |
| SfaNI | GCATC | 1 cut(s) | 275 |
| Sse9I | AATT | 5 cut(s) | 10, 98, 250, 276, 352 |
| SspMI | CTAG | 1 cut(s) | 405 |
| StyD4I | CCNGG | 1 cut(s) | 332 |
| StyI | CCWWGG | 1 cut(s) | 200 |
| TaqI | TCGA | 1 cut(s) | 173 |
| TasI | AATT | 5 cut(s) | 10, 98, 250, 276, 352 |
| TfiI | GAWTC | 4 cut(s) | 44, 94, 163, 272 |
| Tru1I | TTAA | 5 cut(s) | 86, 138, 254, 365, 424 |
| Tru9I | TTAA | 5 cut(s) | 86, 138, 254, 365, 424 |
| TseFI | GTSAC | 1 cut(s) | 20 |
| Tsp45I | GTSAC | 1 cut(s) | 20 |
| TspDTI | ATGAA | 1 cut(s) | 134 |
| XapI | RAATTY | 1 cut(s) | 250 |
| XspI | CTAG | 1 cut(s) | 405 |
| Zsp2I | ATGCAT | 1 cut(s) | 111 |