Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G43940 |
| fragaria_vesca | FvH4_6g25562 |
| pyrus_communis | pycom04g06860 pycom08g15580 |
| rosa_chinensis | RchiOBHm_Chr1g0321741 RchiOBHm_Chr4g0394881 RchiOBHm_Chr4g0426651 RchiOBHm_Chr6g0253621 |
| rosa_laevigata | RLG00000020413 |
| rosa_multiflora | Rmu_sc0003895.1_g000034 Rmu_sc0010958.1_g000004 Rmu_sc0011261.1_g000002 Rmu_ssc0000474.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00031210 Rroxscaffold_1G00048720 Rroxscaffold_2G00088920 Rroxscaffold_6G00409730 |
| rosa_rugosa | Rorug02G0371000 Rorug07G0091500 Rorug07G0252000 Rorug07G0286400 |
| rosa_wichuraiana | Rw5G037290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 22, 88 |
| AluBI | AGCT | 1 cut(s) | 50 |
| AluI | AGCT | 1 cut(s) | 50 |
| AoxI | GGCC | 1 cut(s) | 241 |
| ApeKI | GCWGC | 3 cut(s) | 13, 130, 157 |
| AspS9I | GGNCC | 1 cut(s) | 242 |
| AsuHPI | GGTGA | 1 cut(s) | 29 |
| BbvI | GCAGC | 3 cut(s) | 25, 142, 144 |
| BfaI | CTAG | 2 cut(s) | 203, 270 |
| BfmI | CTRYAG | 1 cut(s) | 11 |
| BisI | GCNGC | 3 cut(s) | 14, 131, 158 |
| BlsI | GCNGC | 3 cut(s) | 15, 132, 159 |
| BmgT120I | GGNCC | 1 cut(s) | 242 |
| BmiI | GGNNCC | 1 cut(s) | 244 |
| Bse3DI | GCAATG | 1 cut(s) | 293 |
| BseGI | GGATG | 2 cut(s) | 10, 169 |
| BseMI | GCAATG | 1 cut(s) | 293 |
| BseMII | CTCAG | 1 cut(s) | 96 |
| BseRI | GAGGAG | 1 cut(s) | 126 |
| BseXI | GCAGC | 3 cut(s) | 25, 142, 144 |
| BshFI | GGCC | 1 cut(s) | 243 |
| BsmI | GAATGC | 1 cut(s) | 120 |
| BsnI | GGCC | 1 cut(s) | 243 |
| Bsp143I | GATC | 1 cut(s) | 95 |
| BspANI | GGCC | 1 cut(s) | 243 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BspLI | GGNNCC | 1 cut(s) | 244 |
| BspMAI | CTGCAG | 1 cut(s) | 15 |
| BsrDI | GCAATG | 1 cut(s) | 293 |
| BssMI | GATC | 1 cut(s) | 95 |
| BstDEI | CTNAG | 1 cut(s) | 105 |
| BstF5I | GGATG | 2 cut(s) | 10, 169 |
| BstKTI | GATC | 1 cut(s) | 98 |
| BstMBI | GATC | 1 cut(s) | 95 |
| BstSFI | CTRYAG | 1 cut(s) | 11 |
| BstV1I | GCAGC | 3 cut(s) | 25, 142, 144 |
| BsuRI | GGCC | 1 cut(s) | 243 |
| BtsCI | GGATG | 2 cut(s) | 10, 169 |
| Cfr13I | GGNCC | 1 cut(s) | 242 |
| CviAII | CATG | 2 cut(s) | 121, 222 |
| CviJI | RGCY | 4 cut(s) | 16, 50, 133, 243 |
| CviKI_1 | RGCY | 4 cut(s) | 16, 50, 133, 243 |
| DdeI | CTNAG | 1 cut(s) | 105 |
| DpnI | GATC | 1 cut(s) | 97 |
| DpnII | GATC | 1 cut(s) | 95 |
| FaeI | CATG | 2 cut(s) | 124, 225 |
| FaiI | YATR | 6 cut(s) | 122, 128, 172, 223, 306, 310 |
| FatI | CATG | 2 cut(s) | 120, 221 |
| Fnu4HI | GCNGC | 3 cut(s) | 14, 131, 158 |
| FokI | GGATG | 2 cut(s) | 17, 176 |
| Fsp4HI | GCNGC | 3 cut(s) | 14, 131, 158 |
| FspBI | CTAG | 2 cut(s) | 203, 270 |
| GluI | GCNGC | 3 cut(s) | 14, 131, 158 |
| HaeIII | GGCC | 1 cut(s) | 243 |
| Hin1II | CATG | 2 cut(s) | 124, 225 |
| HinfI | GANTC | 1 cut(s) | 101 |
| HphI | GGTGA | 1 cut(s) | 29 |
| Hpy188I | TCNGA | 4 cut(s) | 100, 106, 211, 295 |
| HpyAV | CCTTC | 1 cut(s) | 51 |
| HpyCH4V | TGCA | 3 cut(s) | 13, 118, 130 |
| HpyF3I | CTNAG | 1 cut(s) | 105 |
| Hsp92II | CATG | 2 cut(s) | 124, 225 |
| Kzo9I | GATC | 1 cut(s) | 95 |
| LmnI | GCTCC | 1 cut(s) | 192 |
| LpnPI | CCDG | 1 cut(s) | 146 |
| Lsp1109I | GCAGC | 3 cut(s) | 25, 142, 144 |
| MaeI | CTAG | 2 cut(s) | 203, 270 |
| MaeIII | GTNAC | 2 cut(s) | 35, 263 |
| MalI | GATC | 1 cut(s) | 97 |
| MboI | GATC | 1 cut(s) | 95 |
| MfeI | CAATTG | 1 cut(s) | 31 |
| MluCI | AATT | 2 cut(s) | 31, 90 |
| MmeI | TCCRAC | 1 cut(s) | 254 |
| MnlI | CCTC | 2 cut(s) | 144, 147 |
| MseI | TTAA | 1 cut(s) | 251 |
| MslI | CAYNNNNRTG | 1 cut(s) | 125 |
| MunI | CAATTG | 1 cut(s) | 31 |
| Mva1269I | GAATGC | 1 cut(s) | 120 |
| NdeII | GATC | 1 cut(s) | 95 |
| NlaIII | CATG | 2 cut(s) | 124, 225 |
| NlaIV | GGNNCC | 1 cut(s) | 244 |
| NmuCI | GTSAC | 1 cut(s) | 35 |
| PctI | GAATGC | 1 cut(s) | 120 |
| PfeI | GAWTC | 1 cut(s) | 101 |
| PkrI | GCNGC | 3 cut(s) | 15, 132, 159 |
| PspN4I | GGNNCC | 1 cut(s) | 244 |
| PspPI | GGNCC | 1 cut(s) | 242 |
| PstI | CTGCAG | 1 cut(s) | 15 |
| RseI | CAYNNNNRTG | 1 cut(s) | 125 |
| SaqAI | TTAA | 1 cut(s) | 251 |
| SatI | GCNGC | 3 cut(s) | 14, 131, 158 |
| Sau3AI | GATC | 1 cut(s) | 95 |
| Sau96I | GGNCC | 1 cut(s) | 242 |
| SetI | ASST | 3 cut(s) | 52, 72, 204 |
| SfcI | CTRYAG | 1 cut(s) | 11 |
| SgeI | CNNG | 9 cut(s) | 72, 79, 133, 155, 173, 195, 215, 234, 282 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 125 |
| Sse9I | AATT | 2 cut(s) | 31, 90 |
| SspMI | CTAG | 2 cut(s) | 203, 270 |
| TasI | AATT | 2 cut(s) | 31, 90 |
| TfiI | GAWTC | 1 cut(s) | 101 |
| Tru1I | TTAA | 1 cut(s) | 251 |
| Tru9I | TTAA | 1 cut(s) | 251 |
| TseFI | GTSAC | 1 cut(s) | 35 |
| TseI | GCWGC | 3 cut(s) | 13, 130, 157 |
| Tsp45I | GTSAC | 1 cut(s) | 35 |
| XspI | CTAG | 2 cut(s) | 203, 270 |