pycom04g17060

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0005149
Physical Location & Seq
Forward (+)
19608289 .. 19615115
6827 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2823 bp
ATGGGGCTCATCTCTAGAAAGCTGTTCCCGGCGTGTGAAAGCATGTGCATATGCTGCCCTGCTATGAGGTCGAGATCTAGACAACCTGTTAAGCGTTACAAAAAGCTGCTTGCGGAAATCTTTCCCAAGTCTCCTGATGGCCCTCCCAATGAAAGAAAAATTGTTAAGTTATGTGAATATGCTGCCAAAAACCCTTTTCGAATCCCAAAGATTGCTAAATATCTTGAAGATAGGTGCTACAAAGAGCTTAGACTGGGGCACATCAAATTCATCAATATTGTTGCAGACACTTACAACAAGTTGCTTTGCCTGTGTAAGGAGCAGATGGCTTGTTTTGCAGTCAGTCTGGTGAGTGTGGTTACTGAGCTCCTGGACAACTCTAAGCAAGATACTGTGCGCATACTTGGATGCCAAACTCTAACTAATTTCATCTATAGTCAGATTGTTCATGTCACCTTGGATAACTATGAGCCAGATACACATAATGAAGATGATGAGAGAGGGCAGCCACATCATAATTGGGTAGATGAAGTGGTTCGAAGTGAAAGCAGAGTTGGTGTAGTTGGCGATGACGCTAGTCCTAGCTGCAAGATAATCAGGCCACGACCAGAAAAGAAGGATCCTGCTCTTCTGACGAGAGAAGAGTTTGAAACACCAAAAGTGTGGGCTCAAATTTGTATTCAGAGAATGATAGAGTTATCTAAGGAGAGCACAACGATGCGCCGAGTATTGGATCCAATGTTTGTCTACTTTGATTCTGGGCACCACTGGGTTCCTCGACAAGGGTTGGCCATGCTGGTTTTGTCTGATATGTCATACTTTATGGAGGCTTCAGGGAATCAACAGTTGATTTTAGCCTATGTGATCGGTCATCTTGACCACAAAACCATTTCACAAGATCCACAACTCAAATCTTCTGTCATTCAAGTTGCTAGTGCTTTGGCTAGCCAGATTCGATCTGGTGCAGTGTTGGCAGAAATTGGATTTGTCTCCGACCTATGTAGGCATTTGAGGAAGAGTCTTCAAGCCACTGCTGAATCAGTTGGAGAGCAAGAATCAAACATTAATATCATGCTACAAAATTCCATTGAAGACTGCTTACTAGAAATTTCGAGAGGCATTGGCAATGTTCGGCCACTATTTGACATGATGGCGATAACTCTGGAGAATCTGCCATCTGGAATTGTTGCTAGGGCAACACTTGGATCTTTAATGATTGTTGCTCATATGATCTCATTAGCGTTGATCTCTTCACGTACACAGCAGGTGTTTCCTGAGTCCCTTCTTGTCCAACTTCTGAAAGTCATGGTGCATCCAGATATTGAGGTCCGTGTTGGAGCACACCAAATATTTTCTATTCTTCTCATTCCAACTTTTAACCAGCCCCGGCACGAATCTTCATCTTTACAATCTGGTTTTGGATACCAATCAAGAGGATGGCAGTCGAATACAGCATCTACCTTTGCATCAATCACAGCAAGACTTGAAAAGCTGAGGAAGGAAAAAGATGGCCCCAAAGCCGAAAAGCACGGGAACAGTAATGCTTGTGATGATTTTAGAGATAGAGAGACTGCTGAAGAAGTCTGGAAGCAGGGGTGTAACCGAAAAAAATCCCCTAATGTTTACAAAATTAGCTCAATTATTGACAGGACGGCTGGAACAGTCAGCTTAACAGAGCCAGATCCGTATGTTATGAAGTTTAGTGAGGATCAAATATCACACTTGCTGTCTGCGTTTTGGATACAAGCAAATCTCCCTGATAATTTGCCTTCAAATATTGAGGCTATAGCTCATTCTTTTACTTTAGTGCTTATTTCTTCACATTTGAAGAATCCAACTGACAACCTTATGGTTCGCTTCATTCAACTTCTGCTGTCTCTGAGGAATATATCCCTTGATTCTAACAATGGGACATTGACTCCAGCATGTCAAAGATCTATGCTTGTACTCTCGATTGGCATGTTGATGTTTGCGGCTAAGATCTATCATATTCCTCTGCTCAAGTCATTTATACCATATGATATTCAGGTTGATCCGTATTTAGGCATCAGTGACGATCTTCAAATTTATGTAAAGCGTGATGCAGATGTTAGTAAATATGGATCTGTTACTGATAACGAGATGGCTTCATTGTTACTATCTGATTTGCGGAACAAAATATACGAATCAGACAATATCATGATGGAAATCTTAGTTCAGTTCCTATCAAAGGTTTCTGAGATGAAGGCAGAAGATGTGGCAAACCAACTTTCAGAGTCATTCACACCTGATGATGCATTCATGTTTGGCCCACAATCAATGCTTGACTGTGACCAAAATCAAATGCCTGTTCATTCAAAGGAATCATCGTTTGATGGGGAATTTCCATCAAATTCATCAGTGGAGGATGATGTGACAAGTGAAGCATCTGTTGCTGACCTCTCACGTTTCATTCCCAGAATACCTACATCCTCCTCTATACCGCCCCATGTTATCAGCATTGGACAGCTGATGGAGTCGGCACTTGAGGTAGCTGGTCAAGTAGCGGGGACAACTGTCTCTACATCACCTCTCCCCTACAACACCATGGCAAGCCAGTGCGAAGCCCTTGGCACAGGGACAAGGAAGAAACTCTCCAACTGGTTGGCCCATGAAAATCATCAGAGCAGTGGTCGTGACAGATTGTTTCCAGCATTTCCTGCAGATGGACGCGCAGCACTCCAGAAGATAACGATTGACATTGGGCATGCTCATGGAGCTGCATCGGCACAGGACCCCTGGTTGGCTATGAGGCTGCCTCCTGCTAGTCCATTTGACAACTTCCTCAAGGCAGCTGGGTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

941

Amino Acids

104.71

Weight (kDa)

6.06

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 65 - 147 4.3e-19 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1255
Acc16I TGCGCA 1 cut(s) 398
Acc36I ACCTGC 1 cut(s) 1255
AccB1I GGYRCC 1 cut(s) 762
AccI GTMKAC 1 cut(s) 747
AccII CGCG 1 cut(s) 2691
AciI CCGC 5 cut(s) 113, 1973, 2149, 2462, 2525
AcoI YGGCCR 2 cut(s) 789, 1133
AcsI RAATTY 7 cut(s) 266, 672, 1081, 1107, 2064, 2360, 2371
AcuI CTGAAG 2 cut(s) 816, 1596
AfaI GTAC 2 cut(s) 1258, 1947
AfiI CCNNNNNNNGG 7 cut(s) 316, 730, 782, 2042, 2209, 2684, 2761
AjnI CCWGG 2 cut(s) 369, 2756
AjuI GAANNNNNNNTTGG 2 cut(s) 537, 569
Alw21I GWGCWC 3 cut(s) 369, 713, 1342
Alw26I GTCTC 5 cut(s) 135, 994, 1562, 1881, 2542
AoxI GGCC 7 cut(s) 139, 599, 789, 1133, 1510, 2287, 2625
ApeKI GCWGC 9 cut(s) 54, 106, 182, 505, 585, 2693, 2738, 2773, 2810
ApoI RAATTY 7 cut(s) 266, 672, 1081, 1107, 2064, 2360, 2371
ArsI GACNNNNNNTTYG 2 cut(s) 903, 935
AseI ATTAAT 1 cut(s) 1065
Asp700I GAANNNNTTC 2 cut(s) 120, 534
AspLEI GCGC 3 cut(s) 399, 723, 2693
AspS9I GGNCC 6 cut(s) 140, 1327, 1511, 2288, 2626, 2752
AsuC2I CCSGG 2 cut(s) 29, 1387
AsuHPI GGTGA 3 cut(s) 361, 445, 2538
AsuII TTCGAA 2 cut(s) 199, 538
AsuNHI GCTAGC 1 cut(s) 944
AvaII GGWCC 2 cut(s) 1327, 2752
BaeGI GKGCMC 2 cut(s) 261, 765
BalI TGGCCA 1 cut(s) 791
BamHI GGATCC 2 cut(s) 619, 733
BanI GGYRCC 1 cut(s) 762
BanII GRGCYC 3 cut(s) 9, 369, 670
BarI GAAGNNNNNNTAC 2 cut(s) 1083, 1115
BbsI GAAGAC 2 cut(s) 1013, 1098
Bbv12I GWGCWC 3 cut(s) 369, 713, 1342
BbvCI CCTCAGC 1 cut(s) 1493
BbvI GCAGC 8 cut(s) 41, 93, 169, 517, 572, 2705, 2725, 2760
BceAI ACGGC 1 cut(s) 1668
BciT130I CCWGG 2 cut(s) 371, 2758
BciVI GTATCC 2 cut(s) 1415, 1734
BcnI CCSGG 2 cut(s) 29, 1387
BcoDI GTCTC 5 cut(s) 135, 994, 1562, 1881, 2542
BfaI CTAG 9 cut(s) 15, 78, 576, 582, 933, 945, 1103, 1191, 2784
BfmI CTRYAG 3 cut(s) 433, 1785, 2679
BfuAI ACCTGC 1 cut(s) 1255
BfuI GTATCC 2 cut(s) 1415, 1734
BglII AGATCT 3 cut(s) 74, 1934, 1980
Bme1390I CCNGG 4 cut(s) 29, 371, 1387, 2758
Bme18I GGWCC 2 cut(s) 1327, 2752
BmgT120I GGNCC 6 cut(s) 140, 1327, 1511, 2288, 2626, 2752
BmiI GGNNCC 6 cut(s) 621, 735, 764, 774, 1513, 2754
BmrFI CCNGG 4 cut(s) 29, 371, 1387, 2758
BmrI ACTGGG 2 cut(s) 263, 778
BmtI GCTAGC 1 cut(s) 948
BmuI ACTGGG 2 cut(s) 263, 778
BoxI GACNNNNGTC 2 cut(s) 576, 2534
BpiI GAAGAC 2 cut(s) 1013, 1098
BplI GAGNNNNNCTC 2 cut(s) 2761, 2793
BpmI CTGGAG 3 cut(s) 1184, 1905, 2684
Bpu10I CCTNAGC 1 cut(s) 1493
Bpu14I TTCGAA 2 cut(s) 199, 538
BpuEI CTTGAG 3 cut(s) 1985, 2525, 2789
BpuMI CCSGG 2 cut(s) 29, 1387
BsaAI YACGTR 1 cut(s) 1256
BsaBI GATNNNNATC 2 cut(s) 1426, 2186
BsaJI CCNNGG 5 cut(s) 456, 1385, 2565, 2587, 2756
BsaXI ACNNNNNCTCC 2 cut(s) 1903, 1933
Bsc4I CCNNNNNNNGG 7 cut(s) 316, 730, 782, 2042, 2209, 2684, 2761
Bse1I ACTGG 4 cut(s) 258, 773, 2575, 2624
Bse3DI GCAATG 1 cut(s) 1132
Bse8I GATNNNNATC 2 cut(s) 1426, 2186
BseBI CCWGG 2 cut(s) 371, 2758
BseDI CCNNGG 5 cut(s) 456, 1385, 2565, 2587, 2756
BseGI GGATG 5 cut(s) 413, 1312, 1442, 2392, 2447
BseJI GATNNNNATC 2 cut(s) 1426, 2186
BseLI CCNNNNNNNGG 7 cut(s) 316, 730, 782, 2042, 2209, 2684, 2761
BseMI GCAATG 1 cut(s) 1132
BseMII CTCAG 5 cut(s) 354, 1266, 1484, 1871, 2208
BseNI ACTGG 4 cut(s) 258, 773, 2575, 2624
BseRI GAGGAG 1 cut(s) 2443
BseSI GKGCMC 2 cut(s) 261, 765
BseXI GCAGC 8 cut(s) 41, 93, 169, 517, 572, 2705, 2725, 2760
BseYI CCCAGC 1 cut(s) 2813
BsgI GTGCAG 1 cut(s) 984
Bsh1236I CGCG 1 cut(s) 2691
BshFI GGCC 7 cut(s) 141, 601, 791, 1135, 1512, 2289, 2627
BshNI GGYRCC 1 cut(s) 762
BsiHKAI GWGCWC 3 cut(s) 369, 713, 1342
BsiSI CCGG 2 cut(s) 29, 1387
BslFI GGGAC 4 cut(s) 1264, 1924, 2542, 2611
BslI CCNNNNNNNGG 7 cut(s) 316, 730, 782, 2042, 2209, 2684, 2761
BsmAI GTCTC 5 cut(s) 135, 994, 1562, 1881, 2542
BsmFI GGGAC 4 cut(s) 1264, 1924, 2542, 2611
BsmI GAATGC 1 cut(s) 2276
BsnI GGCC 7 cut(s) 141, 601, 791, 1135, 1512, 2289, 2627
Bsp119I TTCGAA 2 cut(s) 199, 538
Bsp1286I GDGCHC 7 cut(s) 9, 261, 369, 670, 713, 765, 1342
Bsp19I CCATGG 1 cut(s) 2565
BspACI CCGC 5 cut(s) 113, 1973, 2149, 2462, 2525
BspANI GGCC 7 cut(s) 141, 601, 791, 1135, 1512, 2289, 2627
BspCNI CTCAG 5 cut(s) 355, 1267, 1485, 1872, 2209
BspFNI CGCG 1 cut(s) 2691
BspHI TCATGA 1 cut(s) 2178
BspLI GGNNCC 6 cut(s) 621, 735, 764, 774, 1513, 2754
BspMAI CTGCAG 1 cut(s) 2683
BspMI ACCTGC 1 cut(s) 1255
BspOI GCTAGC 1 cut(s) 948
BspQI GCTCTTC 1 cut(s) 633
BspT104I TTCGAA 2 cut(s) 199, 538
BspT107I GGYRCC 1 cut(s) 762
BsrDI GCAATG 1 cut(s) 1132
BsrI ACTGG 4 cut(s) 258, 773, 2575, 2624
BssECI CCNNGG 5 cut(s) 456, 1385, 2565, 2587, 2756
BssT1I CCWWGG 3 cut(s) 456, 2565, 2587
Bst2UI CCWGG 2 cut(s) 371, 2758
Bst4CI ACNGT 6 cut(s) 394, 846, 1538, 1663, 2309, 2536
Bst6I CTCTTC 4 cut(s) 633, 636, 1010, 1255
BstAPI GCANNNNNTGC 3 cut(s) 54, 2411, 2678
BstBAI YACGTR 1 cut(s) 1256
BstBI TTCGAA 2 cut(s) 199, 538
BstC8I GCNNGC 4 cut(s) 111, 946, 2572, 2727
BstDSI CCRYGG 1 cut(s) 2565
BstENI CCTNNNNNAGG 3 cut(s) 314, 780, 2207
BstF5I GGATG 5 cut(s) 413, 1312, 1442, 2392, 2447
BstFNI CGCG 1 cut(s) 2691
BstHHI GCGC 3 cut(s) 399, 723, 2693
BstMAI GTCTC 5 cut(s) 135, 994, 1562, 1881, 2542
BstMWI GCNNNNNNNGC 7 cut(s) 54, 335, 971, 2411, 2678, 2735, 2744
BstNI CCWGG 2 cut(s) 371, 2758
BstNSI RCATGY 4 cut(s) 46, 1929, 1963, 2729
BstPAI GACNNNNGTC 2 cut(s) 576, 2534
BstSCI CCNGG 4 cut(s) 27, 369, 1385, 2756
BstSFI CTRYAG 3 cut(s) 433, 1785, 2679
BstSLI GKGCMC 2 cut(s) 261, 765
BstUI CGCG 1 cut(s) 2691
BstV1I GCAGC 8 cut(s) 41, 93, 169, 517, 572, 2705, 2725, 2760
BstV2I GAAGAC 2 cut(s) 1013, 1098
BstX2I RGATCY 9 cut(s) 74, 619, 733, 898, 1205, 1681, 1934, 1980, 2102
BstXI CCANNNNNNTGG 2 cut(s) 663, 2623
BstYI RGATCY 9 cut(s) 74, 619, 733, 898, 1205, 1681, 1934, 1980, 2102
BsuI GTATCC 2 cut(s) 1415, 1734
BsuRI GGCC 7 cut(s) 141, 601, 791, 1135, 1512, 2289, 2627
BtgI CCRYGG 1 cut(s) 2565
BtgZI GCGATG 1 cut(s) 582
BtsCI GGATG 5 cut(s) 413, 1312, 1442, 2392, 2447
BtsI GCAGTG 3 cut(s) 972, 1029, 2653
BtsIMutI CAGTG 7 cut(s) 766, 972, 1029, 2056, 2385, 2582, 2653
BveI ACCTGC 1 cut(s) 1255
Cac8I GCNNGC 4 cut(s) 111, 946, 2572, 2727
CciI TCATGA 1 cut(s) 2178
CfoI GCGC 3 cut(s) 399, 723, 2693
Cfr13I GGNCC 6 cut(s) 140, 1327, 1511, 2288, 2626, 2752
CseI GACGC 2 cut(s) 581, 2697
Csp6I GTAC 2 cut(s) 1257, 1946
CviQI GTAC 2 cut(s) 1257, 1946
EaeI YGGCCR 2 cut(s) 789, 1133
Eam1104I CTCTTC 4 cut(s) 633, 636, 1010, 1255
EarI CTCTTC 4 cut(s) 633, 636, 1010, 1255
Ecl136II GAGCTC 1 cut(s) 367
Eco130I CCWWGG 3 cut(s) 456, 2565, 2587
Eco24I GRGCYC 3 cut(s) 9, 369, 670
Eco47I GGWCC 2 cut(s) 1327, 2752
Eco53kI GAGCTC 1 cut(s) 367
Eco57I CTGAAG 2 cut(s) 816, 1596
EcoICRI GAGCTC 1 cut(s) 367
EcoNI CCTNNNNNAGG 3 cut(s) 314, 780, 2207
EcoO109I RGGNCCY 1 cut(s) 2752
EcoRII CCWGG 2 cut(s) 369, 2756
EcoT14I CCWWGG 3 cut(s) 456, 2565, 2587
EcoT22I ATGCAT 1 cut(s) 2278
EcoT38I GRGCYC 3 cut(s) 9, 369, 670
ErhI CCWWGG 3 cut(s) 456, 2565, 2587
FaqI GGGAC 4 cut(s) 1264, 1924, 2542, 2611
FauI CCCGC 1 cut(s) 2518
FauNDI CATATG 3 cut(s) 50, 1227, 2017
FblI GTMKAC 1 cut(s) 747
FokI GGATG 5 cut(s) 420, 1299, 1449, 2399, 2434
FriOI GRGCYC 3 cut(s) 9, 369, 670
FspAI RTGCGCAY 1 cut(s) 398
FspBI CTAG 9 cut(s) 15, 78, 576, 582, 933, 945, 1103, 1191, 2784
FspI TGCGCA 1 cut(s) 398
GlaI GCGC 3 cut(s) 398, 722, 2692
GsaI CCCAGC 1 cut(s) 2817
GsuI CTGGAG 3 cut(s) 1184, 1905, 2684
HaeIII GGCC 7 cut(s) 141, 601, 791, 1135, 1512, 2289, 2627
HapII CCGG 2 cut(s) 29, 1387
HgaI GACGC 2 cut(s) 581, 2697
HhaI GCGC 3 cut(s) 399, 723, 2693
Hin6I GCGC 3 cut(s) 397, 721, 2691
HinP1I GCGC 3 cut(s) 397, 721, 2691
HpaII CCGG 2 cut(s) 29, 1387
HphI GGTGA 3 cut(s) 361, 445, 2538
Hpy166II GTNNAC 3 cut(s) 748, 1259, 1624
Hpy8I GTNNAC 3 cut(s) 748, 1259, 1624
HpyAV CCTTC 5 cut(s) 610, 1292, 1492, 1779, 2218
HpyCH4III ACNGT 6 cut(s) 394, 846, 1538, 1663, 2309, 2536
HpyCH4IV ACGT 2 cut(s) 1255, 2425
HpyF10VI GCNNNNNNNGC 7 cut(s) 54, 335, 971, 2411, 2678, 2735, 2744
HpySE526I ACGT 2 cut(s) 1255, 2425
HspAI GCGC 3 cut(s) 397, 721, 2691
LguI GCTCTTC 1 cut(s) 633
LmnI GCTCC 4 cut(s) 319, 372, 1337, 2735
Lsp1109I GCAGC 8 cut(s) 41, 93, 169, 517, 572, 2705, 2725, 2760
MaeI CTAG 9 cut(s) 15, 78, 576, 582, 933, 945, 1103, 1191, 2784
MaeII ACGT 2 cut(s) 1255, 2425
MflI RGATCY 9 cut(s) 74, 619, 733, 898, 1205, 1681, 1934, 1980, 2102
MhlI GDGCHC 7 cut(s) 9, 261, 369, 670, 713, 765, 1342
MlsI TGGCCA 1 cut(s) 791
MluNI TGGCCA 1 cut(s) 791
MlyI GAGTC 5 cut(s) 1027, 1286, 1912, 2264, 2504
MmeI TCCRAC 7 cut(s) 1017, 1024, 1315, 1315, 1394, 1859, 2640
Mox20I TGGCCA 1 cut(s) 791
Mph1103I ATGCAT 1 cut(s) 2278
MroXI GAANNNNTTC 2 cut(s) 120, 534
MscI TGGCCA 1 cut(s) 791
MseI TTAA 6 cut(s) 90, 165, 1065, 1211, 1377, 1670
MslI CAYNNNNRTG 3 cut(s) 716, 1964, 2730
Msp20I TGGCCA 1 cut(s) 791
MspA1I CMGCKG 2 cut(s) 2488, 2813
MspI CCGG 2 cut(s) 29, 1387
MspR9I CCNGG 4 cut(s) 29, 371, 1387, 2758
Mva1269I GAATGC 1 cut(s) 2276
MvaI CCWGG 2 cut(s) 371, 2758
MvnI CGCG 1 cut(s) 2691
MwoI GCNNNNNNNGC 7 cut(s) 54, 335, 971, 2411, 2678, 2735, 2744
NciI CCSGG 2 cut(s) 29, 1387
NcoI CCATGG 1 cut(s) 2565
NdeI CATATG 3 cut(s) 50, 1227, 2017
NheI GCTAGC 1 cut(s) 944
NlaIV GGNNCC 6 cut(s) 621, 735, 764, 774, 1513, 2754
NmeAIII GCCGAG 1 cut(s) 749
NmuCI GTSAC 5 cut(s) 451, 2051, 2309, 2392, 2654
NsbI TGCGCA 1 cut(s) 398
NsiI ATGCAT 1 cut(s) 2278
NspI RCATGY 4 cut(s) 46, 1929, 1963, 2729
NspV TTCGAA 2 cut(s) 199, 538
PaeI GCATGC 1 cut(s) 2729
PagI TCATGA 1 cut(s) 2178
PaqCI CACCTGC 1 cut(s) 1255
PciSI GCTCTTC 1 cut(s) 633
PctI GAATGC 1 cut(s) 2276
PdmI GAANNNNTTC 2 cut(s) 120, 534
PfoI TCCNGGA 1 cut(s) 369
PleI GAGTC 5 cut(s) 1026, 1285, 1912, 2263, 2503
PpsI GAGTC 5 cut(s) 1026, 1285, 1912, 2263, 2503
Ppu21I YACGTR 1 cut(s) 1256
PpuMI RGGWCCY 1 cut(s) 2752
PshAI GACNNNNGTC 2 cut(s) 576, 2534
PshBI ATTAAT 1 cut(s) 1065
Psp124BI GAGCTC 1 cut(s) 369
Psp5II RGGWCCY 1 cut(s) 2752
Psp6I CCWGG 2 cut(s) 369, 2756
PspFI CCCAGC 1 cut(s) 2813
PspGI CCWGG 2 cut(s) 369, 2756
PspN4I GGNNCC 6 cut(s) 621, 735, 764, 774, 1513, 2754
PspPI GGNCC 6 cut(s) 140, 1327, 1511, 2288, 2626, 2752
PspPPI RGGWCCY 1 cut(s) 2752
PsrI GAACNNNNNNTAC 2 cut(s) 2144, 2176
PstI CTGCAG 1 cut(s) 2683
PsuI RGATCY 9 cut(s) 74, 619, 733, 898, 1205, 1681, 1934, 1980, 2102
PvuII CAGCTG 2 cut(s) 2488, 2813
RsaI GTAC 2 cut(s) 1258, 1947
RsaNI GTAC 2 cut(s) 1257, 1946
RseI CAYNNNNRTG 3 cut(s) 716, 1964, 2730
SacI GAGCTC 1 cut(s) 369
SapI GCTCTTC 1 cut(s) 633
SaqAI TTAA 6 cut(s) 90, 165, 1065, 1211, 1377, 1670
Sau96I GGNCC 6 cut(s) 140, 1327, 1511, 2288, 2626, 2752
SchI GAGTC 5 cut(s) 1027, 1286, 1912, 2264, 2504
ScrFI CCNGG 4 cut(s) 29, 371, 1387, 2758
SduI GDGCHC 7 cut(s) 9, 261, 369, 670, 713, 765, 1342
SfcI CTRYAG 3 cut(s) 433, 1785, 2679
SfuI TTCGAA 2 cut(s) 199, 538
SinI GGWCC 2 cut(s) 1327, 2752
SmiMI CAYNNNNRTG 3 cut(s) 716, 1964, 2730
SmlI CTYRAG 3 cut(s) 2000, 2504, 2804
SmoI CTYRAG 3 cut(s) 2000, 2504, 2804
SphI GCATGC 1 cut(s) 2729
SsiI CCGC 5 cut(s) 113, 1973, 2149, 2462, 2525
SspI AATATT 3 cut(s) 277, 1350, 1777
SspMI CTAG 9 cut(s) 15, 78, 576, 582, 933, 945, 1103, 1191, 2784
SstI GAGCTC 1 cut(s) 369
StyD4I CCNGG 4 cut(s) 27, 369, 1385, 2756
StyI CCWWGG 3 cut(s) 456, 2565, 2587
TaaI ACNGT 6 cut(s) 394, 846, 1538, 1663, 2309, 2536
TaiI ACGT 2 cut(s) 1258, 2428
TaqI TCGA 8 cut(s) 71, 199, 538, 778, 955, 1112, 1445, 1952
TaqII GACCGA 1 cut(s) 857
TatI WGTACW 1 cut(s) 1945
TauI GCSGC 1 cut(s) 1976
Tru1I TTAA 6 cut(s) 90, 165, 1065, 1211, 1377, 1670
Tru9I TTAA 6 cut(s) 90, 165, 1065, 1211, 1377, 1670
TscAI CASTG 7 cut(s) 773, 972, 1036, 2056, 2385, 2582, 2653
TseFI GTSAC 5 cut(s) 451, 2051, 2309, 2392, 2654
TseI GCWGC 9 cut(s) 54, 106, 182, 505, 585, 2693, 2738, 2773, 2810
Tsp45I GTSAC 5 cut(s) 451, 2051, 2309, 2392, 2654
TspGWI ACGGA 3 cut(s) 1319, 1674, 2025
TspRI CASTG 7 cut(s) 773, 972, 1036, 2056, 2385, 2582, 2653
VpaK11BI GGWCC 2 cut(s) 1327, 2752
VspI ATTAAT 1 cut(s) 1065
XagI CCTNNNNNAGG 3 cut(s) 314, 780, 2207
XapI RAATTY 7 cut(s) 266, 672, 1081, 1107, 2064, 2360, 2371
XbaI TCTAGA 2 cut(s) 14, 77
XceI RCATGY 4 cut(s) 46, 1929, 1963, 2729
XcmI CCANNNNNNNNNTGG 2 cut(s) 516, 956
XmiI GTMKAC 1 cut(s) 747
XmnI GAANNNNTTC 2 cut(s) 120, 534
XspI CTAG 9 cut(s) 15, 78, 576, 582, 933, 945, 1103, 1191, 2784
Zsp2I ATGCAT 1 cut(s) 2278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.