Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0009511

Physical Location & Seq

Genomic Coordinates Reverse (-)

21932235 .. 21934136

Gene Structure 1902 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGACAACAGTTGCCGCCAAGCTGTTGCCTCAGAGCCTCCACGTCACCACCCACCCGAACCCCTCCTCCCACCAGACCAGTGCCGTGAGCTGCAGGGTTTGCATTTCGTCAAACGGCGGAAACCGCCGCAGAAACCCGCCAAAGGCGGCGGCTTCCGCCGAAGCAAGACCGACCCAGTTGCAGAACAATGATGTCAAAGAAACCCATTTGGTGAAAGTTCTCAACAGGTCCTGCAAAGCAGGGCAGTACAATGAAGCACTCTATTTTCTTGAGCTGATGGTGAACAAGGGCTACAAGCCTGATGTGATTCTCTGCACAAAGCTCGTCAAAGGGTTCTTCAATTCGAGAAATGTCGAAAAGGCCGTTCGGGTTATGCAGATTTTGGAGAAGTATGGTGAGCCTGATTTGTTTTCATACAATGCGTTGATCAGCGGTTTCTGTAAGGCAAATCGGATTGATGCAGCAAACAAAGTGCTTGATAGGATGAGGAGCCAGGGGTTCTCACCTGATGTTGTTACTTACAATATAATGATTGGGAGTCTTTGTGGGAGGGGGAAGCTAGGATTAGCTTTGAAGGTTTTGGATCAGTTGGTGAAGGATAATTGCAGGCCAACTGTGATTACTTACACGATTTTGATCGAAGCAACGATTCCTGAAGGCGGAATTGATGAAGCAATGAAGCTTTTGGATGAGATGTTGTCAAGAGGGCTTAAACCTGACATGCATACTTACAATGCAGTTGTTAGGGGAATGTGCAGAGAAGGGATGCTGGATAGGGCTTTCGAGTTTGTTAGGAGCTTAGATTTGAAGGGATGTTCGCCTAATGTCGTCTCGTACAACATTTTGTTACGAGCGCTATTGAATCGAGGTAAATGGGAAGAAGGGGAGAAGCTGGTGAGCAATATGTGCTCGAGAGGCTGTGAGCCGAACGTGGTGACTTACAGCATTTTGATTAGCACGCTGTGTCGCGATGGCAAAGTTGAGGATGCAGTGAATGTGTTAAAGATCATGAAGGACAAGGGGTTGACTCCGGATGCGTACAGTTATGATCCGTTGGTTTCTGCTTTCTGCAAAGAGGGGAGATTGGATTTGGCAATAGAGTTTTTGGATTACATGATATCGGATGGCTGCTTGCCGGATATTGTGAACTACAACACGATATTGGCTGCGTTGTGTAAGAGTGGAAAGGCTGATCAGGCTTTGCAAATCTTCGAGAACCTCGGTGAAGTGGGATGTCCTCCGAATGTGAGCTCATACAACACCATGTTCAGTGCACTGTGGAACTGTGGAGACAGAGTTCGAGCTTTGCAAATGGTATCAGAAATGGTAAGCAAAGGAATTGATCCTGATGGGATTACTTACAATTCACTTATATCGTGTTTATGCAGAGATGGGATGGTGAATGAGGCTATAGGGTTGTTGGTAGACATGGAAACTGGTGGCTTTCAGCCAACAGTTATCAGTTACAACATTGTTCTTCTCGGGTTGTGCAAAACGCGTAGGATTGTCGATGCCATTGAAGTGCTCGCGGCAATGGTTGAAAAGGGCTGCCGGCCAAATGAAACTACCTACACTTTGTTGATTGAAGGAATTGGTTTCGCAGGATGGCGAGCTGAAGCGATGCAGCTTGCCCACTCAGTTTTTAGTTTAAGGGTGATTTCCGAAGATTCGTTCAGACGTTTGAATAGGACCTTTCCCATGCTTGATGTGTACAAAGAGCTTACTCTGTCTGAGATTAAGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

582

Amino Acids

64.3

Weight (kDa)

7.95

Isoelectric Point (pI)

34.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	91 - 146	3.4e-07	Pentatricopeptide repeat domain
PPR_3	PF13812	133 - 181	2.8e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	133 - 163	3.7e-11	PPR repeat
PPR_2	PF13041	134 - 182	5.3e-18	PPR repeat family
PPR	PF01535	137 - 167	1.8e-07	PPR repeat
PPR_1	PF12854	166 - 196	5.8e-09	PPR repeat
PPR_2	PF13041	169 - 215	7.2e-15	PPR repeat family
TPR_24	PF23276	185 - 293	1.6e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	191 - 291	9.4e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	201 - 232	4.8e-06	PPR repeat
PPR_2	PF13041	220 - 253	1.9e-09	PPR repeat family
PPR_3	PF13812	227 - 286	6.5e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	235 - 265	2.7e-10	PPR repeat
PPR_2	PF13041	243 - 287	1e-11	PPR repeat family
PPR_2	PF13041	274 - 323	1.9e-18	PPR repeat family
PPR_long	PF17177	295 - 412	3.1e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	297 - 357	6e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	305 - 338	7.1e-14	PPR repeat
PPR	PF01535	312 - 342	1.2e-06	PPR repeat
PPR_2	PF13041	317 - 358	7.1e-10	PPR repeat family
PPR_3	PF13812	334 - 390	2e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	340 - 372	7.7e-10	PPR repeat
TPR_24	PF23276	346 - 438	1.8e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	370 - 425	4.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	375 - 405	3.9e-08	PPR repeat
PPR_2	PF13041	379 - 426	7.7e-14	PPR repeat family
PPR_2	PF13041	414 - 463	3e-13	PPR repeat family
PPR_3	PF13812	415 - 460	2.1e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	434 - 529	1.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	439 - 497	1.2e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	445 - 478	4.1e-12	PPR repeat
PPR	PF01535	452 - 481	2e-07	PPR repeat
PPR_2	PF13041	452 - 498	1.5e-13	PPR repeat family
PPR_3	PF13812	473 - 532	1.3e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	484 - 530	3.2e-13	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0009511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04760 AT3G04760
fragaria_vesca	FvH4_6g01920
malus_domestica	MD04G1230300.v1.1 MD12G1247200.v1.1 MD12G1247400.v1.1
prunus_persica	Prupe.6G350200_v2.0.a1
pyrus_communis	pycom04g20420
rosa_chinensis	RchiOBHm_Chr3g0449651
rosa_laevigata	RLG00000025811
rosa_multiflora	Rmu_co8354861.1_g000001 Rmu_sc0007357.1_g000002 Rmu_sc0009629.1_g000012 Rmu_sc0009629.1_g000013 Rmu_sc0010999.1_g000001
rosa_roxburghii	Rroxscaffold_6G00427550
rosa_rugosa	Rorug02G0622600
rosa_samantha	Rh3AG020600 Rh3BG021300 Rh3CG019800 Rh3DG021100
rosa_wichuraiana	Rw3G001700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1425
AccII	CGCG	3 cut(s)	969, 1498, 1529
AccIII	TCCGGA	1 cut(s)	1030
AclWI	GGATC	3 cut(s)	591, 1043, 1337
AcoI	YGGCCR	1 cut(s)	1553
AcuI	CTGAAG	2 cut(s)	675, 1635
AdeI	CACNNNGTG	1 cut(s)	963
AfaI	GTAC	4 cut(s)	248, 836, 1040, 1712
AfeI	AGCGCT	1 cut(s)	855
AfiI	CCNNNNNNNGG	2 cut(s)	142, 659
AflIII	ACRYGT	1 cut(s)	1496
AgsI	TTSAA	8 cut(s)	340, 574, 808, 862, 1520, 1541, 1586, 1684
AjiI	CACGTC	1 cut(s)	43
AjnI	CCWGG	1 cut(s)	492
AloI	GAACNNNNNNTCC	4 cut(s)	50, 82, 1281, 1313
Alw21I	GWGCWC	4 cut(s)	911, 1253, 1276, 1527
Alw26I	GTCTC	2 cut(s)	835, 1284
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	3 cut(s)	591, 1043, 1337
AlwNI	CAGNNNCTG	1 cut(s)	231
Ama87I	CYCGRG	2 cut(s)	910, 1481
Aor13HI	TCCGGA	1 cut(s)	1030
Aor51HI	AGCGCT	1 cut(s)	855
AoxI	GGCC	3 cut(s)	360, 608, 1553
ApaLI	GTGCAC	1 cut(s)	1272
ApeKI	GCWGC	6 cut(s)	90, 461, 1128, 1166, 1548, 1624
AspLEI	GCGC	1 cut(s)	856
AspS9I	GGNCC	2 cut(s)	228, 1689
AvaI	CYCGRG	2 cut(s)	910, 1481
AvaII	GGWCC	2 cut(s)	228, 1689
BaeGI	GKGCMC	1 cut(s)	1276
BanII	GRGCYC	1 cut(s)	1253
Bbv12I	GWGCWC	4 cut(s)	911, 1253, 1276, 1527
BbvI	GCAGC	6 cut(s)	77, 473, 1115, 1153, 1535, 1636
BccI	CCATC	7 cut(s)	271, 965, 1118, 1343, 1385, 1390, 1599
BceAI	ACGGC	3 cut(s)	68, 130, 347
BcgI	CGANNNNNNTGC	4 cut(s)	160, 194, 304, 338
BciT130I	CCWGG	1 cut(s)	494
BclI	TGATCA	2 cut(s)	426, 1192
BcoDI	GTCTC	2 cut(s)	835, 1284
BfaI	CTAG	2 cut(s)	560, 1744
BfmI	CTRYAG	2 cut(s)	91, 1410
BfoI	RGCGCY	1 cut(s)	857
Bme1390I	CCNGG	1 cut(s)	494
Bme18I	GGWCC	2 cut(s)	228, 1689
BmeT110I	CYCGRG	2 cut(s)	910, 1481
BmgBI	CACGTC	1 cut(s)	43
BmgT120I	GGNCC	2 cut(s)	228, 1689
BmiI	GGNNCC	1 cut(s)	491
BmrFI	CCNGG	1 cut(s)	494
BmrI	ACTGGG	1 cut(s)	169
BmsI	GCATC	6 cut(s)	448, 756, 976, 1024, 1501, 1611
BmuI	ACTGGG	1 cut(s)	169
BpuEI	CTTGAG	1 cut(s)	290
BsaBI	GATNNNNATC	1 cut(s)	635
BsaJI	CCNNGG	2 cut(s)	493, 1219
BsaWI	WCCGGW	1 cut(s)	1030
BsaXI	ACNNNNNCTCC	6 cut(s)	50, 80, 529, 559, 1281, 1311
Bsc4I	CCNNNNNNNGG	2 cut(s)	142, 659
Bse118I	RCCGGY	1 cut(s)	1551
Bse1I	ACTGG	3 cut(s)	78, 175, 1441
Bse3DI	GCAATG	2 cut(s)	681, 1539
Bse8I	GATNNNNATC	1 cut(s)	635
BseAI	TCCGGA	1 cut(s)	1030
BseBI	CCWGG	1 cut(s)	494
BseDI	CCNNGG	2 cut(s)	493, 1219
BseJI	GATNNNNATC	1 cut(s)	635
BseLI	CCNNNNNNNGG	2 cut(s)	142, 659
BseMI	GCAATG	2 cut(s)	681, 1539
BseMII	CTCAG	3 cut(s)	44, 1650, 1722
BseNI	ACTGG	3 cut(s)	78, 175, 1441
BseRI	GAGGAG	2 cut(s)	55, 502
BseSI	GKGCMC	1 cut(s)	1276
BseXI	GCAGC	6 cut(s)	77, 473, 1115, 1153, 1535, 1636
BsgI	GTGCAG	2 cut(s)	298, 775
Bsh1236I	CGCG	3 cut(s)	969, 1498, 1529
BshFI	GGCC	3 cut(s)	362, 610, 1555
BsiHKAI	GWGCWC	4 cut(s)	911, 1253, 1276, 1527
BsiHKCI	CYCGRG	2 cut(s)	910, 1481
BsiSI	CCGG	3 cut(s)	1031, 1136, 1552
BslI	CCNNNNNNNGG	2 cut(s)	142, 659
BsmAI	GTCTC	2 cut(s)	835, 1284
BsmBI	CGTCTC	1 cut(s)	835
BsnI	GGCC	3 cut(s)	362, 610, 1555
BsoBI	CYCGRG	2 cut(s)	910, 1481
Bsp1286I	GDGCHC	4 cut(s)	911, 1253, 1276, 1527
Bsp13I	TCCGGA	1 cut(s)	1030
Bsp1407I	TGTACA	1 cut(s)	1710
Bsp143I	GATC	7 cut(s)	426, 583, 636, 1005, 1048, 1192, 1342
Bsp68I	TCGCGA	1 cut(s)	969
BspANI	GGCC	3 cut(s)	362, 610, 1555
BspCNI	CTCAG	3 cut(s)	43, 1649, 1723
BspEI	TCCGGA	1 cut(s)	1030
BspFNI	CGCG	3 cut(s)	969, 1498, 1529
BspHI	TCATGA	1 cut(s)	1008
BspLI	GGNNCC	1 cut(s)	491
BspMAI	CTGCAG	1 cut(s)	95
BspPI	GGATC	3 cut(s)	591, 1043, 1337
BsrDI	GCAATG	2 cut(s)	681, 1539
BsrFI	RCCGGY	1 cut(s)	1551
BsrGI	TGTACA	1 cut(s)	1710
BsrI	ACTGG	3 cut(s)	78, 175, 1441
BssAI	RCCGGY	1 cut(s)	1551
BssECI	CCNNGG	2 cut(s)	493, 1219
BssMI	GATC	7 cut(s)	426, 583, 636, 1005, 1048, 1192, 1342
Bst2UI	CCWGG	1 cut(s)	494
Bst4CI	ACNGT	6 cut(s)	10, 616, 1043, 1278, 1286, 1456
BstAPI	GCANNNNNTGC	2 cut(s)	99, 906
BstAUI	TGTACA	1 cut(s)	1710
BstC8I	GCNNGC	7 cut(s)	608, 959, 1133, 1527, 1553, 1611, 1629
BstDEI	CTNAG	4 cut(s)	30, 799, 1636, 1731
BstFNI	CGCG	3 cut(s)	969, 1498, 1529
BstH2I	RGCGCY	1 cut(s)	857
BstHHI	GCGC	1 cut(s)	856
BstKTI	GATC	7 cut(s)	429, 586, 639, 1008, 1051, 1195, 1345
BstMAI	GTCTC	2 cut(s)	835, 1284
BstMBI	GATC	7 cut(s)	426, 583, 636, 1005, 1048, 1192, 1342
BstMWI	GCNNNNNNNGC	6 cut(s)	99, 123, 155, 906, 915, 1196
BstNI	CCWGG	1 cut(s)	494
BstNSI	RCATGY	1 cut(s)	724
BstSCI	CCNGG	1 cut(s)	492
BstSFI	CTRYAG	2 cut(s)	91, 1410
BstSLI	GKGCMC	1 cut(s)	1276
BstUI	CGCG	3 cut(s)	969, 1498, 1529
BstV1I	GCAGC	6 cut(s)	77, 473, 1115, 1153, 1535, 1636
BsuRI	GGCC	3 cut(s)	362, 610, 1555
BtgZI	GCGATG	2 cut(s)	984, 1634
BtrI	CACGTC	1 cut(s)	43
BtsI	GCAGTG	1 cut(s)	996
BtsIMutI	CAGTG	4 cut(s)	85, 996, 1274, 1276
BtuMI	TCGCGA	1 cut(s)	969
Cac8I	GCNNGC	7 cut(s)	608, 959, 1133, 1527, 1553, 1611, 1629
CaiI	CAGNNNCTG	1 cut(s)	231
CciI	TCATGA	1 cut(s)	1008
CfoI	GCGC	1 cut(s)	856
Cfr10I	RCCGGY	1 cut(s)	1551
Cfr13I	GGNCC	2 cut(s)	228, 1689
Csp6I	GTAC	4 cut(s)	247, 835, 1039, 1711
CviAII	CATG	6 cut(s)	721, 1009, 1114, 1264, 1429, 1699
CviQI	GTAC	4 cut(s)	247, 835, 1039, 1711
DdeI	CTNAG	4 cut(s)	30, 799, 1636, 1731
DpnI	GATC	7 cut(s)	428, 585, 638, 1007, 1050, 1194, 1344
DpnII	GATC	7 cut(s)	426, 583, 636, 1005, 1048, 1192, 1342
DraIII	CACNNNGTG	1 cut(s)	963
EaeI	YGGCCR	1 cut(s)	1553
EciI	GGCGGA	3 cut(s)	132, 145, 675
Ecl136II	GAGCTC	1 cut(s)	1251
Eco24I	GRGCYC	1 cut(s)	1253
Eco32I	GATATC	1 cut(s)	1119
Eco47I	GGWCC	2 cut(s)	228, 1689
Eco47III	AGCGCT	1 cut(s)	855
Eco53kI	GAGCTC	1 cut(s)	1251
Eco57I	CTGAAG	2 cut(s)	675, 1635
Eco88I	CYCGRG	2 cut(s)	910, 1481
EcoICRI	GAGCTC	1 cut(s)	1251
EcoO109I	RGGNCCY	2 cut(s)	228, 1689
EcoRII	CCWGG	1 cut(s)	492
EcoRV	GATATC	1 cut(s)	1119
EcoT22I	ATGCAT	1 cut(s)	726
EcoT38I	GRGCYC	1 cut(s)	1253
Esp3I	CGTCTC	1 cut(s)	835
FaeI	CATG	6 cut(s)	724, 1012, 1117, 1267, 1432, 1702
FatI	CATG	6 cut(s)	720, 1008, 1113, 1263, 1428, 1698
FauI	CCCGC	1 cut(s)	144
FbaI	TGATCA	2 cut(s)	426, 1192
FblI	GTMKAC	1 cut(s)	1425
FriOI	GRGCYC	1 cut(s)	1253
FspBI	CTAG	2 cut(s)	560, 1744
GlaI	GCGC	1 cut(s)	855
HaeII	RGCGCY	1 cut(s)	857
HaeIII	GGCC	3 cut(s)	362, 610, 1555
HapII	CCGG	3 cut(s)	1031, 1136, 1552
HhaI	GCGC	1 cut(s)	856
Hin1II	CATG	6 cut(s)	724, 1012, 1117, 1267, 1432, 1702
Hin6I	GCGC	1 cut(s)	854
HinP1I	GCGC	1 cut(s)	854
HincII	GTYRAC	1 cut(s)	1026
HindII	GTYRAC	1 cut(s)	1026
HindIII	AAGCTT	1 cut(s)	680
HinfI	GANTC	6 cut(s)	307, 538, 649, 862, 1027, 1667
HpaII	CCGG	3 cut(s)	1031, 1136, 1552
Hpy166II	GTNNAC	6 cut(s)	283, 1026, 1147, 1274, 1426, 1711
Hpy188I	TCNGA	8 cut(s)	33, 453, 1123, 1242, 1321, 1663, 1676, 1732
Hpy8I	GTNNAC	6 cut(s)	283, 1026, 1147, 1274, 1426, 1711
HpyAV	CCTTC	8 cut(s)	568, 589, 650, 755, 802, 875, 1006, 1580
HpyCH4III	ACNGT	6 cut(s)	10, 616, 1043, 1278, 1286, 1456
HpyCH4IV	ACGT	3 cut(s)	42, 930, 1678
HpyF10VI	GCNNNNNNNGC	6 cut(s)	99, 123, 155, 906, 915, 1196
HpyF3I	CTNAG	4 cut(s)	30, 799, 1636, 1731
HpySE526I	ACGT	3 cut(s)	42, 930, 1678
Hsp92II	CATG	6 cut(s)	724, 1012, 1117, 1267, 1432, 1702
HspAI	GCGC	1 cut(s)	854
Kpn2I	TCCGGA	1 cut(s)	1030
KroI	GCCGGC	1 cut(s)	1551
KroNI	GCCGGC	1 cut(s)	1553
Ksp22I	TGATCA	2 cut(s)	426, 1192
Kzo9I	GATC	7 cut(s)	426, 583, 636, 1005, 1048, 1192, 1342
LmnI	GCTCC	2 cut(s)	489, 795
Lsp1109I	GCAGC	6 cut(s)	77, 473, 1115, 1153, 1535, 1636
LweI	GCATC	6 cut(s)	448, 756, 976, 1024, 1501, 1611
MaeI	CTAG	2 cut(s)	560, 1744
MaeII	ACGT	3 cut(s)	42, 930, 1678
MaeIII	GTNAC	5 cut(s)	43, 514, 846, 934, 1463
MalI	GATC	7 cut(s)	428, 585, 638, 1007, 1050, 1194, 1344
MboI	GATC	7 cut(s)	426, 583, 636, 1005, 1048, 1192, 1342
MboII	GAAGA	5 cut(s)	328, 890, 1201, 1469, 1676
MhlI	GDGCHC	4 cut(s)	911, 1253, 1276, 1527
MluCI	AATT	6 cut(s)	340, 601, 663, 1338, 1363, 1590
MluI	ACGCGT	1 cut(s)	1496
MlyI	GAGTC	2 cut(s)	547, 1021
Mph1103I	ATGCAT	1 cut(s)	726
MroI	TCCGGA	1 cut(s)	1030
MroNI	GCCGGC	1 cut(s)	1551
MseI	TTAA	4 cut(s)	711, 1001, 1649, 1737
MslI	CAYNNNNRTG	1 cut(s)	1520
MspA1I	CMGCKG	1 cut(s)	432
MspI	CCGG	3 cut(s)	1031, 1136, 1552
MspR9I	CCNGG	1 cut(s)	494
MvaI	CCWGG	1 cut(s)	494
MvnI	CGCG	3 cut(s)	969, 1498, 1529
MwoI	GCNNNNNNNGC	6 cut(s)	99, 123, 155, 906, 915, 1196
NaeI	GCCGGC	1 cut(s)	1553
NdeII	GATC	7 cut(s)	426, 583, 636, 1005, 1048, 1192, 1342
NgoMIV	GCCGGC	1 cut(s)	1551
NlaIII	CATG	6 cut(s)	724, 1012, 1117, 1267, 1432, 1702
NlaIV	GGNNCC	1 cut(s)	491
NmuCI	GTSAC	2 cut(s)	43, 934
NruI	TCGCGA	1 cut(s)	969
NsiI	ATGCAT	1 cut(s)	726
NspI	RCATGY	1 cut(s)	724
PaeR7I	CTCGAG	1 cut(s)	910
PagI	TCATGA	1 cut(s)	1008
PcsI	WCGNNNNNNNCGW	1 cut(s)	360
PdiI	GCCGGC	1 cut(s)	1553
PfeI	GAWTC	4 cut(s)	307, 649, 862, 1667
PleI	GAGTC	2 cut(s)	546, 1021
PpsI	GAGTC	2 cut(s)	546, 1021
PpuMI	RGGWCCY	2 cut(s)	228, 1689
Psp124BI	GAGCTC	1 cut(s)	1253
Psp5II	RGGWCCY	2 cut(s)	228, 1689
Psp6I	CCWGG	1 cut(s)	492
PspGI	CCWGG	1 cut(s)	492
PspN4I	GGNNCC	1 cut(s)	491
PspPI	GGNCC	2 cut(s)	228, 1689
PspPPI	RGGWCCY	2 cut(s)	228, 1689
PsrI	GAACNNNNNNTAC	2 cut(s)	275, 307
PstI	CTGCAG	1 cut(s)	95
PstNI	CAGNNNCTG	1 cut(s)	231
RruI	TCGCGA	1 cut(s)	969
RsaI	GTAC	4 cut(s)	248, 836, 1040, 1712
RsaNI	GTAC	4 cut(s)	247, 835, 1039, 1711
RseI	CAYNNNNRTG	1 cut(s)	1520
SacI	GAGCTC	1 cut(s)	1253
SaqAI	TTAA	4 cut(s)	711, 1001, 1649, 1737
Sau3AI	GATC	7 cut(s)	426, 583, 636, 1005, 1048, 1192, 1342
Sau96I	GGNCC	2 cut(s)	228, 1689
SchI	GAGTC	2 cut(s)	547, 1021
ScrFI	CCNGG	1 cut(s)	494
SduI	GDGCHC	4 cut(s)	911, 1253, 1276, 1527
SfaNI	GCATC	6 cut(s)	448, 756, 976, 1024, 1501, 1611
SfcI	CTRYAG	2 cut(s)	91, 1410
Sfr274I	CTCGAG	1 cut(s)	910
SinI	GGWCC	2 cut(s)	228, 1689
SlaI	CTCGAG	1 cut(s)	910
SmiMI	CAYNNNNRTG	1 cut(s)	1520
SmlI	CTYRAG	2 cut(s)	269, 910
SmoI	CTYRAG	2 cut(s)	269, 910
Sse9I	AATT	6 cut(s)	340, 601, 663, 1338, 1363, 1590
SspMI	CTAG	2 cut(s)	560, 1744
SstI	GAGCTC	1 cut(s)	1253
StyD4I	CCNGG	1 cut(s)	492
TaaI	ACNGT	6 cut(s)	10, 616, 1043, 1278, 1286, 1456
TaiI	ACGT	3 cut(s)	45, 933, 1681
TaqI	TCGA	9 cut(s)	344, 354, 639, 783, 865, 911, 1212, 1300, 1509
TaqII	GACCGA	1 cut(s)	184
TasI	AATT	6 cut(s)	340, 601, 663, 1338, 1363, 1590
TatI	WGTACW	2 cut(s)	246, 1710
TauI	GCSGC	5 cut(s)	17, 129, 149, 152, 1532
TfiI	GAWTC	4 cut(s)	307, 649, 862, 1667
Tru1I	TTAA	4 cut(s)	711, 1001, 1649, 1737
Tru9I	TTAA	4 cut(s)	711, 1001, 1649, 1737
TscAI	CASTG	4 cut(s)	85, 996, 1276, 1281
TseFI	GTSAC	2 cut(s)	43, 934
TseI	GCWGC	6 cut(s)	90, 461, 1128, 1166, 1548, 1624
Tsp45I	GTSAC	2 cut(s)	43, 934
TspDTI	ATGAA	6 cut(s)	267, 402, 684, 692, 1025, 1575
TspGWI	ACGGA	1 cut(s)	1041
TspRI	CASTG	4 cut(s)	85, 996, 1276, 1281
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	2 cut(s)	228, 1689
XceI	RCATGY	1 cut(s)	724
XhoI	CTCGAG	1 cut(s)	910
XmiI	GTMKAC	1 cut(s)	1425
XspI	CTAG	2 cut(s)	560, 1744
Zsp2I	ATGCAT	1 cut(s)	726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.