Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004220

Physical Location & Seq

Genomic Coordinates Reverse (-)

3397188 .. 3402089

Gene Structure 4902 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g02900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGGGAACTATAACAACATGGGTTTCCTGGTCTTAGCTCTTGTAGGGTTTATTTTCCTGAGCAAGGCTAATGGCGCTATCCATTATTATGATTTCATTGTGCAAGAAACAAATTTTACAAGGCTTTGTAGCACAAAGAGCATCTTAACTGTGAATGGAACTCTTCCAGGGCCAACCATCACTGTTAACAGAGGAGACATCGCTTTTATCAATGTCCACAACCAAGGATATTACGGTCTCACCATTCACTGGCATGGAGTGAAGCAACCAAGAAATCCATGGTCAGATGGACCTGAGAATATCACTCAGTGCCCTATTCAACCAGGAACAAACTTCACGTACGAAGTTATATTCTCTAGTGAAGAAGGAACATTATGGTGGCATTCTCACAGTGACTGGACACGCGCCACCGTCTATGGTGCCATTGTTATTCTACCGGCTGCCGGCACCACTTATCCATTTGCAACACCAGATGCACAAGAAACAGTCATTCTTGGATCATGGTTTAAGGGAGATGTGATGGAAATAATAGAAGAGGCTCTCTCAACAGGTGGCGATCCAAACATTTCAGATGCCTTCACAATTAACGGACAGCCTGGAGATTTATATAGTTGTTCCAATGAGACAACATACCGATGGATGGTTGATTACGGTAAGACCTATCTTCTTCGGGTAATTAACGCGGTGATGAACGAAGAACAGTTCTTCGCCATTGCAAACCACAACCTCACAGTCGTAGCACAAGACGCTGCATACATAAAACCTATAACCACCTCTTACATCATGATAACTCCAGGCCAAACCATGGACATTTTAGTCACCGCAAACCAACCTCCCAGCCATTATTACATGGCTTCTCATCCTTTTATGGATGGAACTGGCGTTTCACATAACAACAGCACCACCACTGCAATTGTTCAATACAACGGCAACTACAGCACCCCATCAACCACTCCCTTTCCAACCCTTCCGTTGGAAGCCGATGACACAGCTGCTGATAACTTCACTAAGCAAATCAGGGCATTGGCAAGCAAAGAGCACCCTATTGATGTCCCATTAAAAATTCATTCCAGGATCTATATGACTATTGCAATCAATGAAAGAATTTGTGCTAATTCTTCATGTAAAGGCCCGAATGGAAATGCGCTTTCTGCAAGCTTAAACAACGTCAGTTTCGTGATTCCATCTGTTGATGTACTGCAAGCATATTATCGGGGTAACAATGGAGTCTACAGAACTAGTTTCCCAAACAAGCCACCTAATACTTACAACTACACTGGAGACGTGGGTAACAACACAATATACCCGAACTTTGGTACGAGGGTGAGAATGATCGAATATGGTGAAGGAGTTGATCGATCATTTTCCAAGGAACCAACGTCATCGCACCTGAGAACCATCCAATGCATCTCCATGGTTTCAGCTTCTATTTGGTCGGAACTGGTGCCGGCAATTTTAACCATACAACATCGCCCAAGACCTACAATTTGGTTGACCCCCCAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

503

Amino Acids

55.61

Weight (kDa)

5.85

Isoelectric Point (pI)

31.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004220)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g12610 FvH4_2g12610 FvH4_2g21650
malus_domestica	MD00G1014800.v1.1 MD00G1190700.v1.1 MD02G1264400.v1.1 MD10G1042600.v1.1
prunus_persica	Prupe.8G047100_v2.0.a1 Prupe.8G047200_v2.0.a1 Prupe.8G047300_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047900_v2.0.a1 Prupe.8G048100_v2.0.a1
pyrus_communis	pycom05g02900 pycom10g02970
rosa_chinensis	RchiOBHm_Chr6g0273201 RchiOBHm_Chr6g0288321
rosa_laevigata	RLG00000012414 RLG00000013632 RLG00000013639
rosa_multiflora	Rmu_sc0000239.1_g000090
rosa_roxburghii	Rroxscaffold_7G00180140 Rroxscaffold_7G00195550
rosa_rugosa	Rorug06G0073100 Rorug06G0195600
rosa_samantha	Rh6BG192200 Rh6BG312600 Rh6CG191600 Rh6CG320400 Rh6DG183000 Rh6DG305600
rosa_wichuraiana	Rw6G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	815
AccB1I	GGYRCC	3 cut(s)	419, 446, 1444
AccB7I	CCANNNNNTGG	2 cut(s)	249, 805
AccI	GTMKAC	1 cut(s)	1230
AccII	CGCG	2 cut(s)	405, 683
AciI	CCGC	2 cut(s)	683, 822
AclWI	GGATC	3 cut(s)	505, 551, 1082
AcsI	RAATTY	3 cut(s)	112, 1062, 1104
AdeI	CACNNNGTG	1 cut(s)	309
AfaI	GTAC	3 cut(s)	341, 1197, 1318
AfiI	CCNNNNNNNGG	7 cut(s)	64, 249, 443, 640, 805, 973, 1313
AgsI	TTSAA	2 cut(s)	320, 920
AhlI	ACTAGT	1 cut(s)	1238
AjiI	CACGTC	1 cut(s)	1285
AjnI	CCWGG	6 cut(s)	27, 166, 322, 595, 793, 1070
AluBI	AGCT	4 cut(s)	38, 992, 1158, 1424
AluI	AGCT	4 cut(s)	38, 992, 1158, 1424
Alw21I	GWGCWC	1 cut(s)	1041
Alw26I	GTCTC	4 cut(s)	189, 242, 617, 1275
AlwI	GGATC	3 cut(s)	505, 551, 1082
AlwNI	CAGNNNCTG	2 cut(s)	396, 995
AoxI	GGCC	3 cut(s)	170, 796, 1129
ApeKI	GCWGC	3 cut(s)	440, 749, 992
ApoI	RAATTY	3 cut(s)	112, 1062, 1104
ArsI	GACNNNNNNTTYG	2 cut(s)	1470, 1502
AspLEI	GCGC	3 cut(s)	77, 407, 1147
AspS9I	GGNCC	3 cut(s)	170, 290, 1130
AsuHPI	GGTGA	5 cut(s)	232, 697, 811, 1336, 1355
AvaII	GGWCC	1 cut(s)	290
BaeGI	GKGCMC	1 cut(s)	314
BaeI	ACNNNNGTAYC	2 cut(s)	1308, 1341
BanI	GGYRCC	3 cut(s)	419, 446, 1444
Bbv12I	GWGCWC	1 cut(s)	1041
BbvI	GCAGC	3 cut(s)	427, 736, 979
BccI	CCATC	9 cut(s)	185, 281, 514, 630, 634, 866, 952, 1192, 1406
BceAI	ACGGC	1 cut(s)	943
BciT130I	CCWGG	6 cut(s)	29, 168, 324, 597, 795, 1072
BcoDI	GTCTC	4 cut(s)	189, 242, 617, 1275
BcuI	ACTAGT	1 cut(s)	1238
BfaI	CTAG	2 cut(s)	357, 1239
BfmI	CTRYAG	2 cut(s)	934, 1231
BfoI	RGCGCY	1 cut(s)	78
BisI	GCNGC	3 cut(s)	441, 750, 993
BlsI	GCNGC	3 cut(s)	442, 751, 994
Bme1390I	CCNGG	6 cut(s)	29, 168, 324, 597, 795, 1072
Bme18I	GGWCC	1 cut(s)	290
BmgBI	CACGTC	1 cut(s)	1285
BmgT120I	GGNCC	3 cut(s)	170, 290, 1130
BmiI	GGNNCC	4 cut(s)	421, 448, 1374, 1446
BmrFI	CCNGG	6 cut(s)	29, 168, 324, 597, 795, 1072
BmsI	GCATC	4 cut(s)	150, 463, 562, 1416
BplI	GAGNNNNNCTC	2 cut(s)	527, 559
BpmI	CTGGAG	3 cut(s)	618, 777, 1299
Bpu10I	CCTNAGC	1 cut(s)	59
Bsa29I	ATCGAT	1 cut(s)	1357
BsaAI	YACGTR	1 cut(s)	339
BsaI	GGTCTC	1 cut(s)	242
BsaJI	CCNNGG	6 cut(s)	167, 223, 278, 804, 1368, 1413
Bsc4I	CCNNNNNNNGG	7 cut(s)	64, 249, 443, 640, 805, 973, 1313
Bse118I	RCCGGY	3 cut(s)	436, 443, 1447
Bse1I	ACTGG	5 cut(s)	254, 401, 883, 1282, 1446
Bse3DI	GCAATG	1 cut(s)	711
BseBI	CCWGG	6 cut(s)	29, 168, 324, 597, 795, 1072
BseCI	ATCGAT	1 cut(s)	1357
BseDI	CCNNGG	6 cut(s)	167, 223, 278, 804, 1368, 1413
BseGI	GGATG	4 cut(s)	645, 859, 877, 1398
BseLI	CCNNNNNNNGG	7 cut(s)	64, 249, 443, 640, 805, 973, 1313
BseMI	GCAATG	1 cut(s)	711
BseMII	CTCAG	4 cut(s)	50, 285, 320, 1382
BseNI	ACTGG	5 cut(s)	254, 401, 883, 1282, 1446
BseRI	GAGGAG	1 cut(s)	207
BseSI	GKGCMC	1 cut(s)	314
BseXI	GCAGC	3 cut(s)	427, 736, 979
BseYI	CCCAGC	1 cut(s)	836
Bsh1236I	CGCG	2 cut(s)	405, 683
BshFI	GGCC	3 cut(s)	172, 798, 1131
BshNI	GGYRCC	3 cut(s)	419, 446, 1444
BshVI	ATCGAT	1 cut(s)	1357
BsiHKAI	GWGCWC	1 cut(s)	1041
BsiSI	CCGG	3 cut(s)	437, 444, 1448
BsiWI	CGTACG	1 cut(s)	339
BslFI	GGGAC	1 cut(s)	1037
BslI	CCNNNNNNNGG	7 cut(s)	64, 249, 443, 640, 805, 973, 1313
BsmAI	GTCTC	4 cut(s)	189, 242, 617, 1275
BsmBI	CGTCTC	1 cut(s)	1275
BsmFI	GGGAC	1 cut(s)	1037
BsmI	GAATGC	1 cut(s)	382
BsnI	GGCC	3 cut(s)	172, 798, 1131
Bso31I	GGTCTC	1 cut(s)	242
Bsp1286I	GDGCHC	2 cut(s)	314, 1041
Bsp143I	GATC	6 cut(s)	497, 556, 1074, 1332, 1354, 1358
Bsp19I	CCATGG	3 cut(s)	278, 804, 1413
BspACI	CCGC	2 cut(s)	683, 822
BspANI	GGCC	3 cut(s)	172, 798, 1131
BspCNI	CTCAG	4 cut(s)	51, 286, 319, 1383
BspDI	ATCGAT	1 cut(s)	1357
BspFNI	CGCG	2 cut(s)	405, 683
BspHI	TCATGA	1 cut(s)	783
BspLI	GGNNCC	4 cut(s)	421, 448, 1374, 1446
BspPI	GGATC	3 cut(s)	505, 551, 1082
BspT107I	GGYRCC	3 cut(s)	419, 446, 1444
BspTNI	GGTCTC	1 cut(s)	242
BsrDI	GCAATG	1 cut(s)	711
BsrFI	RCCGGY	3 cut(s)	436, 443, 1447
BsrI	ACTGG	5 cut(s)	254, 401, 883, 1282, 1446
BssAI	RCCGGY	3 cut(s)	436, 443, 1447
BssECI	CCNNGG	6 cut(s)	167, 223, 278, 804, 1368, 1413
BssMI	GATC	6 cut(s)	497, 556, 1074, 1332, 1354, 1358
BssT1I	CCWWGG	5 cut(s)	223, 278, 804, 1368, 1413
Bst2UI	CCWGG	6 cut(s)	29, 168, 324, 597, 795, 1072
Bst4CI	ACNGT	9 cut(s)	151, 184, 236, 392, 412, 487, 653, 702, 733
Bst6I	CTCTTC	2 cut(s)	168, 528
BstBAI	YACGTR	1 cut(s)	339
BstC8I	GCNNGC	5 cut(s)	445, 1030, 1156, 1203, 1449
BstDEI	CTNAG	6 cut(s)	34, 59, 294, 306, 1008, 1391
BstDSI	CCRYGG	3 cut(s)	278, 804, 1413
BstENI	CCTNNNNNAGG	1 cut(s)	62
BstF5I	GGATG	4 cut(s)	645, 859, 877, 1398
BstFNI	CGCG	2 cut(s)	405, 683
BstH2I	RGCGCY	1 cut(s)	78
BstHHI	GCGC	3 cut(s)	77, 407, 1147
BstKTI	GATC	6 cut(s)	500, 559, 1077, 1335, 1357, 1361
BstMAI	GTCTC	4 cut(s)	189, 242, 617, 1275
BstMBI	GATC	6 cut(s)	497, 556, 1074, 1332, 1354, 1358
BstMWI	GCNNNNNNNGC	5 cut(s)	74, 138, 746, 936, 1151
BstNI	CCWGG	6 cut(s)	29, 168, 324, 597, 795, 1072
BstSCI	CCNGG	6 cut(s)	27, 166, 322, 595, 793, 1070
BstSFI	CTRYAG	2 cut(s)	934, 1231
BstSLI	GKGCMC	1 cut(s)	314
BstUI	CGCG	2 cut(s)	405, 683
BstV1I	GCAGC	3 cut(s)	427, 736, 979
BstX2I	RGATCY	1 cut(s)	1074
BstYI	RGATCY	1 cut(s)	1074
Bsu15I	ATCGAT	1 cut(s)	1357
BsuRI	GGCC	3 cut(s)	172, 798, 1131
BsuTUI	ATCGAT	1 cut(s)	1357
BtgI	CCRYGG	3 cut(s)	278, 804, 1413
BtgZI	GCGATG	3 cut(s)	184, 1368, 1454
BtrI	CACGTC	1 cut(s)	1285
BtsCI	GGATG	4 cut(s)	645, 859, 877, 1398
BtsI	GCAGTG	1 cut(s)	906
BtsIMutI	CAGTG	6 cut(s)	180, 247, 314, 397, 906, 1275
Cac8I	GCNNGC	5 cut(s)	445, 1030, 1156, 1203, 1449
CaiI	CAGNNNCTG	2 cut(s)	396, 995
CciI	TCATGA	1 cut(s)	783
CfoI	GCGC	3 cut(s)	77, 407, 1147
Cfr10I	RCCGGY	3 cut(s)	436, 443, 1447
Cfr13I	GGNCC	3 cut(s)	170, 290, 1130
ClaI	ATCGAT	1 cut(s)	1357
CseI	GACGC	1 cut(s)	755
Csp6I	GTAC	3 cut(s)	340, 1196, 1317
CspCI	CAANNNNNGTGG	2 cut(s)	895, 930
CviAII	CATG	9 cut(s)	19, 254, 279, 501, 784, 805, 850, 1122, 1414
CviQI	GTAC	3 cut(s)	340, 1196, 1317
DdeI	CTNAG	6 cut(s)	34, 59, 294, 306, 1008, 1391
DpnI	GATC	6 cut(s)	499, 558, 1076, 1334, 1356, 1360
DpnII	GATC	6 cut(s)	497, 556, 1074, 1332, 1354, 1358
DraIII	CACNNNGTG	1 cut(s)	309
DrdI	GACNNNNNNGTC	1 cut(s)	815
DseDI	GACNNNNNNGTC	1 cut(s)	815
Eam1104I	CTCTTC	2 cut(s)	168, 528
EarI	CTCTTC	2 cut(s)	168, 528
Eco130I	CCWWGG	5 cut(s)	223, 278, 804, 1368, 1413
Eco31I	GGTCTC	1 cut(s)	242
Eco47I	GGWCC	1 cut(s)	290
EcoNI	CCTNNNNNAGG	1 cut(s)	62
EcoRII	CCWGG	6 cut(s)	27, 166, 322, 595, 793, 1070
EcoT14I	CCWWGG	5 cut(s)	223, 278, 804, 1368, 1413
EcoT22I	ATGCAT	1 cut(s)	1409
ErhI	CCWWGG	5 cut(s)	223, 278, 804, 1368, 1413
Esp3I	CGTCTC	1 cut(s)	1275
FaeI	CATG	9 cut(s)	22, 257, 282, 504, 787, 808, 853, 1125, 1417
FalI	AAGNNNNNCTT	2 cut(s)	128, 160
FaqI	GGGAC	1 cut(s)	1037
FatI	CATG	9 cut(s)	18, 253, 278, 500, 783, 804, 849, 1121, 1413
FblI	GTMKAC	1 cut(s)	1230
Fnu4HI	GCNGC	3 cut(s)	441, 750, 993
FokI	GGATG	4 cut(s)	652, 846, 884, 1385
Fsp4HI	GCNGC	3 cut(s)	441, 750, 993
FspBI	CTAG	2 cut(s)	357, 1239
GlaI	GCGC	3 cut(s)	76, 406, 1146
GluI	GCNGC	3 cut(s)	441, 750, 993
GsaI	CCCAGC	1 cut(s)	840
GsuI	CTGGAG	3 cut(s)	618, 777, 1299
HaeII	RGCGCY	1 cut(s)	78
HaeIII	GGCC	3 cut(s)	172, 798, 1131
HapII	CCGG	3 cut(s)	437, 444, 1448
HgaI	GACGC	1 cut(s)	755
HhaI	GCGC	3 cut(s)	77, 407, 1147
Hin1II	CATG	9 cut(s)	22, 257, 282, 504, 787, 808, 853, 1125, 1417
Hin6I	GCGC	3 cut(s)	75, 405, 1145
HinP1I	GCGC	3 cut(s)	75, 405, 1145
HincII	GTYRAC	2 cut(s)	187, 1494
HindII	GTYRAC	2 cut(s)	187, 1494
HindIII	AAGCTT	1 cut(s)	1156
HinfI	GANTC	2 cut(s)	1180, 1227
HpaI	GTTAAC	1 cut(s)	187
HpaII	CCGG	3 cut(s)	437, 444, 1448
HphI	GGTGA	5 cut(s)	232, 697, 811, 1336, 1355
Hpy166II	GTNNAC	4 cut(s)	187, 217, 1231, 1494
Hpy188I	TCNGA	3 cut(s)	286, 571, 1438
Hpy188III	TCNNGA	3 cut(s)	58, 784, 1177
Hpy8I	GTNNAC	4 cut(s)	187, 217, 1231, 1494
HpyAV	CCTTC	4 cut(s)	359, 586, 977, 1340
HpyCH4III	ACNGT	9 cut(s)	151, 184, 236, 392, 412, 487, 653, 702, 733
HpyCH4IV	ACGT	4 cut(s)	338, 1167, 1284, 1379
HpyF10VI	GCNNNNNNNGC	5 cut(s)	74, 138, 746, 936, 1151
HpyF3I	CTNAG	6 cut(s)	34, 59, 294, 306, 1008, 1391
HpySE526I	ACGT	4 cut(s)	338, 1167, 1284, 1379
Hsp92II	CATG	9 cut(s)	22, 257, 282, 504, 787, 808, 853, 1125, 1417
HspAI	GCGC	3 cut(s)	75, 405, 1145
KroI	GCCGGC	2 cut(s)	443, 1447
KroNI	GCCGGC	2 cut(s)	445, 1449
KspAI	GTTAAC	1 cut(s)	187
Kzo9I	GATC	6 cut(s)	497, 556, 1074, 1332, 1354, 1358
Lsp1109I	GCAGC	3 cut(s)	427, 736, 979
LweI	GCATC	4 cut(s)	150, 463, 562, 1416
MaeI	CTAG	2 cut(s)	357, 1239
MaeII	ACGT	4 cut(s)	338, 1167, 1284, 1379
MaeIII	GTNAC	4 cut(s)	392, 817, 1217, 1289
MalI	GATC	6 cut(s)	499, 558, 1076, 1334, 1356, 1360
MboI	GATC	6 cut(s)	497, 556, 1074, 1332, 1354, 1358
MboII	GAAGA	8 cut(s)	155, 374, 545, 656, 659, 697, 707, 1110
MfeI	CAATTG	1 cut(s)	912
MflI	RGATCY	1 cut(s)	1074
MhlI	GDGCHC	2 cut(s)	314, 1041
MluCI	AATT	9 cut(s)	112, 582, 675, 912, 1062, 1104, 1114, 1452, 1485
MlyI	GAGTC	1 cut(s)	1236
MmeI	TCCRAC	3 cut(s)	954, 986, 1416
MnlI	CCTC	6 cut(s)	185, 529, 737, 784, 843, 1314
Mph1103I	ATGCAT	1 cut(s)	1409
MroNI	GCCGGC	2 cut(s)	443, 1447
MseI	TTAA	8 cut(s)	146, 186, 507, 585, 678, 1058, 1160, 1457
MslI	CAYNNNNRTG	5 cut(s)	87, 252, 376, 634, 1412
MspA1I	CMGCKG	1 cut(s)	992
MspI	CCGG	3 cut(s)	437, 444, 1448
MspR9I	CCNGG	6 cut(s)	29, 168, 324, 597, 795, 1072
MunI	CAATTG	1 cut(s)	912
Mva1269I	GAATGC	1 cut(s)	382
MvaI	CCWGG	6 cut(s)	29, 168, 324, 597, 795, 1072
MvnI	CGCG	2 cut(s)	405, 683
MwoI	GCNNNNNNNGC	5 cut(s)	74, 138, 746, 936, 1151
NaeI	GCCGGC	2 cut(s)	445, 1449
NcoI	CCATGG	3 cut(s)	278, 804, 1413
NdeII	GATC	6 cut(s)	497, 556, 1074, 1332, 1354, 1358
NgoMIV	GCCGGC	2 cut(s)	443, 1447
NlaIII	CATG	9 cut(s)	22, 257, 282, 504, 787, 808, 853, 1125, 1417
NlaIV	GGNNCC	4 cut(s)	421, 448, 1374, 1446
NmuCI	GTSAC	2 cut(s)	392, 817
NsiI	ATGCAT	1 cut(s)	1409
PagI	TCATGA	1 cut(s)	783
PcsI	WCGNNNNNNNCGW	1 cut(s)	1173
PctI	GAATGC	1 cut(s)	382
PdiI	GCCGGC	2 cut(s)	445, 1449
PfeI	GAWTC	1 cut(s)	1180
Pfl23II	CGTACG	1 cut(s)	339
PflMI	CCANNNNNTGG	2 cut(s)	249, 805
PfoI	TCCNGGA	1 cut(s)	1070
PkrI	GCNGC	3 cut(s)	442, 751, 994
PleI	GAGTC	1 cut(s)	1235
PpsI	GAGTC	1 cut(s)	1235
Ppu21I	YACGTR	1 cut(s)	339
Psp6I	CCWGG	6 cut(s)	27, 166, 322, 595, 793, 1070
PspFI	CCCAGC	1 cut(s)	836
PspGI	CCWGG	6 cut(s)	27, 166, 322, 595, 793, 1070
PspLI	CGTACG	1 cut(s)	339
PspN4I	GGNNCC	4 cut(s)	421, 448, 1374, 1446
PspPI	GGNCC	3 cut(s)	170, 290, 1130
PstNI	CAGNNNCTG	2 cut(s)	396, 995
PsuI	RGATCY	1 cut(s)	1074
PvuII	CAGCTG	1 cut(s)	992
RsaI	GTAC	3 cut(s)	341, 1197, 1318
RsaNI	GTAC	3 cut(s)	340, 1196, 1317
RseI	CAYNNNNRTG	5 cut(s)	87, 252, 376, 634, 1412
SaqAI	TTAA	8 cut(s)	146, 186, 507, 585, 678, 1058, 1160, 1457
SatI	GCNGC	3 cut(s)	441, 750, 993
Sau3AI	GATC	6 cut(s)	497, 556, 1074, 1332, 1354, 1358
Sau96I	GGNCC	3 cut(s)	170, 290, 1130
SchI	GAGTC	1 cut(s)	1236
ScrFI	CCNGG	6 cut(s)	29, 168, 324, 597, 795, 1072
SduI	GDGCHC	2 cut(s)	314, 1041
SfaNI	GCATC	4 cut(s)	150, 463, 562, 1416
SfcI	CTRYAG	2 cut(s)	934, 1231
SinI	GGWCC	1 cut(s)	290
SmiMI	CAYNNNNRTG	5 cut(s)	87, 252, 376, 634, 1412
SpeI	ACTAGT	1 cut(s)	1238
Sse9I	AATT	9 cut(s)	112, 582, 675, 912, 1062, 1104, 1114, 1452, 1485
SsiI	CCGC	2 cut(s)	683, 822
SspMI	CTAG	2 cut(s)	357, 1239
StyD4I	CCNGG	6 cut(s)	27, 166, 322, 595, 793, 1070
StyI	CCWWGG	5 cut(s)	223, 278, 804, 1368, 1413
TaaI	ACNGT	9 cut(s)	151, 184, 236, 392, 412, 487, 653, 702, 733
TaiI	ACGT	4 cut(s)	341, 1170, 1287, 1382
TaqI	TCGA	2 cut(s)	1335, 1357
TasI	AATT	9 cut(s)	112, 582, 675, 912, 1062, 1104, 1114, 1452, 1485
TatI	WGTACW	1 cut(s)	1195
TfiI	GAWTC	1 cut(s)	1180
Tru1I	TTAA	8 cut(s)	146, 186, 507, 585, 678, 1058, 1160, 1457
Tru9I	TTAA	8 cut(s)	146, 186, 507, 585, 678, 1058, 1160, 1457
TscAI	CASTG	6 cut(s)	187, 254, 314, 397, 913, 1282
TseFI	GTSAC	2 cut(s)	392, 817
TseI	GCWGC	3 cut(s)	440, 749, 992
Tsp45I	GTSAC	2 cut(s)	392, 817
TspDTI	ATGAA	5 cut(s)	85, 704, 1055, 1110, 1113
TspGWI	ACGGA	2 cut(s)	603, 960
TspRI	CASTG	6 cut(s)	187, 254, 314, 397, 913, 1282
Van91I	CCANNNNNTGG	2 cut(s)	249, 805
VpaK11BI	GGWCC	1 cut(s)	290
XagI	CCTNNNNNAGG	1 cut(s)	62
XapI	RAATTY	3 cut(s)	112, 1062, 1104
XcmI	CCANNNNNNNNNTGG	1 cut(s)	276
XmiI	GTMKAC	1 cut(s)	1230
XspI	CTAG	2 cut(s)	357, 1239
Zsp2I	ATGCAT	1 cut(s)	1409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.