Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004220

Physical Location & Seq

Genomic Coordinates Reverse (-)

34708998 .. 34713748

Gene Structure 4751 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013639

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGCTGGGTTTAACAAAATGGGTTGCATCTTGACTGCTTTTCTAGGGTTTATGTTTCTGCAACTTTGCAGCGCTGCCCACTATTATGATTGGGTTCTGCAAGAAACAAATTTTACAAGGCTTTGCAGCACGAAGAGCATCTTAACAGTGAATGGCGGTTTTCCGGGGCCAACCATTCAAGTTCACAAAGGAGAAACTATTTACGTCAACGTCAGCAACCAAGGATTATATGGCGTCACCATTCATTGGCACGGAGTGAAGCAGCCGAGAAATCCATGGTCGGATGGACCTGAGAACATAACTCAGTGTCCGATTCAACCGGGATCCAACTTTACATACGAGGTTGTATTTTCCAGTGAAGAAGGAACACTGTGGTGGCACGCTCATAGTGATTGGACACGTGCTACTGTTCATGGCGCCATTGTTGTATTACCGGCTAACGGCACGACATATCCATTTGAAGCTCCATATGCACAGCAAACAATTATTTTAGCTTCATGGTTTAAGGCAGATGTGATGGAAGTAATTAACTCTGCACTCGCAACCGGTGCAGATCCAAACACCTCTGATGCCTTCACAATCAATGGACAGCCTGGTGATTTATACAGTTGCTCAAACGCATCAACATACCGTTTGTTGGTTGACTACGGCAAGACCTATATGCTACGCATAATCAACGCTGTCATGAACGAAGAACAGTTTTTCGCCATTGCCAACCACAACCTCACAGTGGTCACCCAAGACGCGTCCTACATAAAACCCATCACCACCCCGTACATCATGATAACTCCAGGCCAAACTATGGACGTTTTGGTCACCACAAACCAGTCTCGCAGCCATTACTACATGGCCTCAACTGCTTACAATGACGGCGATGTTCCATATCACAACGGCACAACCACGGCCATTCTTCAATATCGAGGAAACTATTCCACCCCATCCACCACTCCGTTTCCCAGCCTTCCTATCCATAATGACACAACAGCTGCTGACAACTTCACCGCCCGTGTGAAGTCTTTGGCAAGCGAGGCACACCCCATCAGTGTTCCGACAAACATCACGACCAGGATCTACATGACTGTTTCTATCAATGAACGAATTTGTGCTAACGCTTCTTGTGCTGGGCCGGATAATAATGCCATTGCTGCTAGCTTAAACAACATCAGTTTTGAGACTCCCTCCATTGATATACTACAAGCTTATTATAGGGGAATAAATGGAGTTTTTCAGGGCAACTTCCCATCCAACCCGCCTCTTTTTTTCAATTTCACCGGAGAAGTGGTAAACAGTACCAAATATCCGACCTTCGCAACCAAAGTAAAGTTCCTCAACTATGGTGAAGGAGTTGAAATAACCTTCCAAGGGACCAACCTCGTTGCTCCTGAGAACCATCCAATGCATCTCCATGGTTTTAGTTTTTATTTGCTTGGAACAGGTTACGGGAATTTTAACGAAACCACCTCACCTGAAACATACAATTTGGTTGATCCACCAGAAGTCAACACCATTGGCGTTCCAAAGAACGGATGGGCTACCATCAGATTCGTAGCTGATAATCCTGGAGTATGGTTTATGCATTGTCATTTGGAGAGGCATGCCAGTTGGGGAATGGACACTGTGTTCATAGTAAGGAATGGAAACACCGAAGAGTCGACGCTTCGCCCACCACCTGCCCATATGCCTCCTTGCTCCCAGTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

567

Amino Acids

62.47

Weight (kDa)

5.63

Isoelectric Point (pI)

37.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 146	3.4e-39	Multicopper oxidase
Cu-oxidase	PF00394	160 - 309	9.5e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	414 - 546	1.1e-38	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004220)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g12610 FvH4_2g12610 FvH4_2g21650
malus_domestica	MD00G1014800.v1.1 MD00G1190700.v1.1 MD02G1264400.v1.1 MD10G1042600.v1.1
prunus_persica	Prupe.8G047100_v2.0.a1 Prupe.8G047200_v2.0.a1 Prupe.8G047300_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047900_v2.0.a1 Prupe.8G048100_v2.0.a1
pyrus_communis	pycom05g02900 pycom10g02970
rosa_chinensis	RchiOBHm_Chr6g0273201 RchiOBHm_Chr6g0288321
rosa_laevigata	RLG00000012414 RLG00000013632 RLG00000013639
rosa_multiflora	Rmu_sc0000239.1_g000090
rosa_roxburghii	Rroxscaffold_7G00180140 Rroxscaffold_7G00195550
rosa_rugosa	Rorug06G0073100 Rorug06G0195600
rosa_samantha	Rh6BG192200 Rh6BG312600 Rh6CG191600 Rh6CG320400 Rh6DG183000 Rh6DG305600
rosa_wichuraiana	Rw6G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1678
AasI	GACNNNNNNGTC	1 cut(s)	812
Acc36I	ACCTGC	1 cut(s)	1678
AccB1I	GGYRCC	1 cut(s)	416
AccB7I	CCANNNNNTGG	2 cut(s)	246, 802
AccI	GTMKAC	1 cut(s)	1652
AccII	CGCG	1 cut(s)	746
AciI	CCGC	3 cut(s)	156, 1002, 1250
AclWI	GGATC	5 cut(s)	318, 331, 548, 1076, 1481
AcoI	YGGCCR	1 cut(s)	903
AcsI	RAATTY	3 cut(s)	109, 1098, 1444
AcvI	CACGTG	1 cut(s)	401
AcyI	GRCGYC	2 cut(s)	234, 417
AdeI	CACNNNGTG	1 cut(s)	256
AfaI	GTAC	2 cut(s)	776, 1291
AfeI	AGCGCT	1 cut(s)	73
AfiI	CCNNNNNNNGG	7 cut(s)	246, 440, 637, 730, 802, 1362, 1523
AflIII	ACRYGT	2 cut(s)	398, 744
AgeI	ACCGGT	1 cut(s)	545
AgsI	TTSAA	6 cut(s)	179, 317, 461, 914, 1264, 1349
AjnI	CCWGG	4 cut(s)	592, 790, 1064, 1558
AjuI	GAANNNNNNNTTGG	2 cut(s)	1307, 1339
AleI	CACNNNNGTG	1 cut(s)	373
AloI	GAACNNNNNNTCC	2 cut(s)	1604, 1636
AluBI	AGCT	6 cut(s)	464, 494, 986, 1152, 1199, 1550
AluI	AGCT	6 cut(s)	464, 494, 986, 1152, 1199, 1550
Alw26I	GTCTC	2 cut(s)	834, 1166
AlwI	GGATC	5 cut(s)	318, 331, 548, 1076, 1481
AlwNI	CAGNNNCTG	1 cut(s)	989
Aor51HI	AGCGCT	1 cut(s)	73
AoxI	GGCC	5 cut(s)	167, 793, 849, 903, 1124
ApeKI	GCWGC	7 cut(s)	69, 74, 126, 262, 834, 986, 1145
ApoI	RAATTY	3 cut(s)	109, 1098, 1444
AsiGI	ACCGGT	1 cut(s)	545
Asp700I	GAANNNNTTC	1 cut(s)	928
AspLEI	GCGC	2 cut(s)	74, 419
AspS9I	GGNCC	4 cut(s)	167, 287, 1124, 1365
AsuC2I	CCSGG	2 cut(s)	165, 321
AsuHPI	GGTGA	9 cut(s)	229, 608, 727, 757, 808, 991, 1261, 1349, 1455
AsuNHI	GCTAGC	1 cut(s)	1148
AvaII	GGWCC	2 cut(s)	287, 1365
BamHI	GGATCC	1 cut(s)	323
BanI	GGYRCC	1 cut(s)	416
BbrPI	CACGTG	1 cut(s)	401
BbvI	GCAGC	7 cut(s)	61, 81, 138, 274, 846, 973, 1132
BccI	CCATC	9 cut(s)	278, 511, 770, 946, 1046, 1249, 1398, 1521, 1544
BceAI	ACGGC	5 cut(s)	457, 664, 886, 907, 918
BciT130I	CCWGG	4 cut(s)	594, 792, 1066, 1560
BcnI	CCSGG	2 cut(s)	165, 321
BcoDI	GTCTC	2 cut(s)	834, 1166
BfaI	CTAG	2 cut(s)	44, 1149
BfoI	RGCGCY	2 cut(s)	75, 420
BfuAI	ACCTGC	1 cut(s)	1678
BisI	GCNGC	7 cut(s)	70, 75, 127, 263, 835, 987, 1146
BlsI	GCNGC	7 cut(s)	71, 76, 128, 264, 836, 988, 1147
Bme1390I	CCNGG	6 cut(s)	165, 321, 594, 792, 1066, 1560
Bme18I	GGWCC	2 cut(s)	287, 1365
BmgT120I	GGNCC	4 cut(s)	167, 287, 1124, 1365
BmiI	GGNNCC	4 cut(s)	168, 325, 418, 1366
BmrFI	CCNGG	6 cut(s)	165, 321, 594, 792, 1066, 1560
BmrI	ACTGGG	1 cut(s)	1687
BmsI	GCATC	5 cut(s)	36, 147, 559, 629, 1408
BmtI	GCTAGC	1 cut(s)	1152
BmuI	ACTGGG	1 cut(s)	1687
BplI	GAGNNNNNCTC	2 cut(s)	1163, 1195
BpmI	CTGGAG	2 cut(s)	774, 1581
BpuMI	CCSGG	2 cut(s)	165, 321
BsaAI	YACGTR	1 cut(s)	401
BsaHI	GRCGYC	2 cut(s)	234, 417
BsaJI	CCNNGG	6 cut(s)	164, 220, 275, 900, 1360, 1405
BsaWI	WCCGGW	2 cut(s)	545, 1271
BsaXI	ACNNNNNCTCC	2 cut(s)	1266, 1296
Bsc4I	CCNNNNNNNGG	7 cut(s)	246, 440, 637, 730, 802, 1362, 1523
Bse118I	RCCGGY	2 cut(s)	433, 545
Bse1I	ACTGG	4 cut(s)	354, 826, 1599, 1693
Bse3DI	GCAATG	2 cut(s)	708, 1140
BseBI	CCWGG	4 cut(s)	594, 792, 1066, 1560
BseDI	CCNNGG	6 cut(s)	164, 220, 275, 900, 1360, 1405
BseGI	GGATG	5 cut(s)	289, 938, 1241, 1390, 1532
BseLI	CCNNNNNNNGG	7 cut(s)	246, 440, 637, 730, 802, 1362, 1523
BseMI	GCAATG	2 cut(s)	708, 1140
BseMII	CTCAG	3 cut(s)	282, 317, 1374
BseNI	ACTGG	4 cut(s)	354, 826, 1599, 1693
BseXI	GCAGC	7 cut(s)	61, 81, 138, 274, 846, 973, 1132
BseYI	CCCAGC	3 cut(s)	5, 956, 1121
BsgI	GTGCAG	2 cut(s)	519, 570
Bsh1236I	CGCG	1 cut(s)	746
BshFI	GGCC	5 cut(s)	169, 795, 851, 905, 1126
BshNI	GGYRCC	1 cut(s)	416
BshTI	ACCGGT	1 cut(s)	545
BsiSI	CCGG	6 cut(s)	164, 320, 434, 546, 1127, 1272
BslFI	GGGAC	1 cut(s)	1378
BslI	CCNNNNNNNGG	7 cut(s)	246, 440, 637, 730, 802, 1362, 1523
BsmAI	GTCTC	2 cut(s)	834, 1166
BsmFI	GGGAC	1 cut(s)	1378
BsnI	GGCC	5 cut(s)	169, 795, 851, 905, 1126
Bsp143I	GATC	4 cut(s)	323, 553, 1068, 1486
Bsp19I	CCATGG	2 cut(s)	275, 1405
BspACI	CCGC	3 cut(s)	156, 1002, 1250
BspANI	GGCC	5 cut(s)	169, 795, 851, 905, 1126
BspCNI	CTCAG	3 cut(s)	283, 316, 1375
BspFNI	CGCG	1 cut(s)	746
BspHI	TCATGA	2 cut(s)	684, 780
BspLI	GGNNCC	4 cut(s)	168, 325, 418, 1366
BspMI	ACCTGC	1 cut(s)	1678
BspOI	GCTAGC	1 cut(s)	1152
BspPI	GGATC	5 cut(s)	318, 331, 548, 1076, 1481
BspQI	GCTCTTC	1 cut(s)	128
BspT107I	GGYRCC	1 cut(s)	416
BsrDI	GCAATG	2 cut(s)	708, 1140
BsrFI	RCCGGY	2 cut(s)	433, 545
BsrI	ACTGG	4 cut(s)	354, 826, 1599, 1693
BssAI	RCCGGY	2 cut(s)	433, 545
BssECI	CCNNGG	6 cut(s)	164, 220, 275, 900, 1360, 1405
BssMI	GATC	4 cut(s)	323, 553, 1068, 1486
BssNI	GRCGYC	2 cut(s)	234, 417
BssT1I	CCWWGG	4 cut(s)	220, 275, 1360, 1405
Bst2UI	CCWGG	4 cut(s)	594, 792, 1066, 1560
Bst6I	CTCTTC	2 cut(s)	128, 1641
BstACI	GRCGYC	2 cut(s)	234, 417
BstAPI	GCANNNNNTGC	1 cut(s)	548
BstBAI	YACGTR	1 cut(s)	401
BstC8I	GCNNGC	4 cut(s)	381, 1024, 1150, 1596
BstDEI	CTNAG	4 cut(s)	291, 303, 1383, 1698
BstDSI	CCRYGG	3 cut(s)	275, 900, 1405
BstEII	GGTNACC	2 cut(s)	733, 814
BstF5I	GGATG	5 cut(s)	289, 938, 1241, 1390, 1532
BstFNI	CGCG	1 cut(s)	746
BstH2I	RGCGCY	2 cut(s)	75, 420
BstHHI	GCGC	2 cut(s)	74, 419
BstKTI	GATC	4 cut(s)	326, 556, 1071, 1489
BstMAI	GTCTC	2 cut(s)	834, 1166
BstMBI	GATC	4 cut(s)	323, 553, 1068, 1486
BstMWI	GCNNNNNNNGC	7 cut(s)	135, 470, 548, 857, 1028, 1118, 1145
BstNI	CCWGG	4 cut(s)	594, 792, 1066, 1560
BstNSI	RCATGY	1 cut(s)	1598
BstPI	GGTNACC	2 cut(s)	733, 814
BstSCI	CCNGG	6 cut(s)	163, 319, 592, 790, 1064, 1558
BstUI	CGCG	1 cut(s)	746
BstV1I	GCAGC	7 cut(s)	61, 81, 138, 274, 846, 973, 1132
BstX2I	RGATCY	3 cut(s)	323, 553, 1068
BstYI	RGATCY	3 cut(s)	323, 553, 1068
BsuRI	GGCC	5 cut(s)	169, 795, 851, 905, 1126
BtgI	CCRYGG	3 cut(s)	275, 900, 1405
BtgZI	GCGATG	1 cut(s)	888
BtsCI	GGATG	5 cut(s)	289, 938, 1241, 1390, 1532
BtsIMutI	CAGTG	7 cut(s)	153, 311, 361, 368, 735, 1048, 1614
BveI	ACCTGC	1 cut(s)	1678
Cac8I	GCNNGC	4 cut(s)	381, 1024, 1150, 1596
CaiI	CAGNNNCTG	1 cut(s)	989
CciI	TCATGA	2 cut(s)	684, 780
CfoI	GCGC	2 cut(s)	74, 419
Cfr10I	RCCGGY	2 cut(s)	433, 545
Cfr13I	GGNCC	4 cut(s)	167, 287, 1124, 1365
CseI	GACGC	4 cut(s)	223, 735, 752, 1663
Csp6I	GTAC	2 cut(s)	775, 1290
CspAI	ACCGGT	1 cut(s)	545
CviAII	CATG	9 cut(s)	276, 413, 498, 685, 781, 847, 1075, 1406, 1595
CviQI	GTAC	2 cut(s)	775, 1290
DdeI	CTNAG	4 cut(s)	291, 303, 1383, 1698
DinI	GGCGCC	1 cut(s)	418
DpnI	GATC	4 cut(s)	325, 555, 1070, 1488
DpnII	GATC	4 cut(s)	323, 553, 1068, 1486
DraIII	CACNNNGTG	1 cut(s)	256
DrdI	GACNNNNNNGTC	1 cut(s)	812
DseDI	GACNNNNNNGTC	1 cut(s)	812
EaeI	YGGCCR	1 cut(s)	903
Eam1104I	CTCTTC	2 cut(s)	128, 1641
EarI	CTCTTC	2 cut(s)	128, 1641
Eco130I	CCWWGG	4 cut(s)	220, 275, 1360, 1405
Eco47I	GGWCC	2 cut(s)	287, 1365
Eco47III	AGCGCT	1 cut(s)	73
Eco72I	CACGTG	1 cut(s)	401
Eco91I	GGTNACC	2 cut(s)	733, 814
EcoO65I	GGTNACC	2 cut(s)	733, 814
EcoRII	CCWGG	4 cut(s)	592, 790, 1064, 1558
EcoT14I	CCWWGG	4 cut(s)	220, 275, 1360, 1405
EcoT22I	ATGCAT	2 cut(s)	1401, 1578
EgeI	GGCGCC	1 cut(s)	418
EheI	GGCGCC	1 cut(s)	418
ErhI	CCWWGG	4 cut(s)	220, 275, 1360, 1405
FaeI	CATG	9 cut(s)	279, 416, 501, 688, 784, 850, 1078, 1409, 1598
FalI	AAGNNNNNCTT	2 cut(s)	125, 157
FaqI	GGGAC	1 cut(s)	1378
FatI	CATG	9 cut(s)	275, 412, 497, 684, 780, 846, 1074, 1405, 1594
FauI	CCCGC	1 cut(s)	1257
FauNDI	CATATG	2 cut(s)	469, 1677
FblI	GTMKAC	1 cut(s)	1652
Fnu4HI	GCNGC	7 cut(s)	70, 75, 127, 263, 835, 987, 1146
FokI	GGATG	5 cut(s)	296, 925, 1228, 1377, 1539
Fsp4HI	GCNGC	7 cut(s)	70, 75, 127, 263, 835, 987, 1146
FspBI	CTAG	2 cut(s)	44, 1149
GlaI	GCGC	2 cut(s)	73, 418
GluI	GCNGC	7 cut(s)	70, 75, 127, 263, 835, 987, 1146
GsaI	CCCAGC	3 cut(s)	9, 960, 1125
GsuI	CTGGAG	2 cut(s)	774, 1581
HaeII	RGCGCY	2 cut(s)	75, 420
HaeIII	GGCC	5 cut(s)	169, 795, 851, 905, 1126
HapII	CCGG	6 cut(s)	164, 320, 434, 546, 1127, 1272
HgaI	GACGC	4 cut(s)	223, 735, 752, 1663
HhaI	GCGC	2 cut(s)	74, 419
Hin1I	GRCGYC	2 cut(s)	234, 417
Hin1II	CATG	9 cut(s)	279, 416, 501, 688, 784, 850, 1078, 1409, 1598
Hin6I	GCGC	2 cut(s)	72, 417
HinP1I	GCGC	2 cut(s)	72, 417
HincII	GTYRAC	4 cut(s)	208, 643, 1501, 1653
HindII	GTYRAC	4 cut(s)	208, 643, 1501, 1653
HindIII	AAGCTT	1 cut(s)	1197
HinfI	GANTC	4 cut(s)	313, 1174, 1542, 1649
HpaII	CCGG	6 cut(s)	164, 320, 434, 546, 1127, 1272
HphI	GGTGA	9 cut(s)	229, 608, 727, 757, 808, 991, 1261, 1349, 1455
Hpy166II	GTNNAC	6 cut(s)	184, 208, 643, 1285, 1501, 1653
Hpy188I	TCNGA	6 cut(s)	283, 312, 568, 1050, 1302, 1541
Hpy188III	TCNNGA	5 cut(s)	31, 685, 781, 1060, 1382
Hpy8I	GTNNAC	6 cut(s)	184, 208, 643, 1285, 1501, 1653
Hpy99I	CGWCG	1 cut(s)	1657
HpyAV	CCTTC	6 cut(s)	356, 583, 971, 1315, 1334, 1366
HpyCH4IV	ACGT	4 cut(s)	204, 210, 400, 807
HpyF10VI	GCNNNNNNNGC	7 cut(s)	135, 470, 548, 857, 1028, 1118, 1145
HpyF3I	CTNAG	4 cut(s)	291, 303, 1383, 1698
HpySE526I	ACGT	4 cut(s)	204, 210, 400, 807
Hsp92I	GRCGYC	2 cut(s)	234, 417
Hsp92II	CATG	9 cut(s)	279, 416, 501, 688, 784, 850, 1078, 1409, 1598
HspAI	GCGC	2 cut(s)	72, 417
KasI	GGCGCC	1 cut(s)	416
Kzo9I	GATC	4 cut(s)	323, 553, 1068, 1486
LguI	GCTCTTC	1 cut(s)	128
LmnI	GCTCC	3 cut(s)	469, 1384, 1694
Lsp1109I	GCAGC	7 cut(s)	61, 81, 138, 274, 846, 973, 1132
LweI	GCATC	5 cut(s)	36, 147, 559, 629, 1408
MaeI	CTAG	2 cut(s)	44, 1149
MaeII	ACGT	4 cut(s)	204, 210, 400, 807
MaeIII	GTNAC	4 cut(s)	235, 733, 814, 1436
MalI	GATC	4 cut(s)	325, 555, 1070, 1488
MboI	GATC	4 cut(s)	323, 553, 1068, 1486
MboII	GAAGA	5 cut(s)	145, 371, 704, 902, 1658
MflI	RGATCY	3 cut(s)	323, 553, 1068
MluCI	AATT	7 cut(s)	109, 483, 525, 1098, 1264, 1444, 1477
MluI	ACGCGT	1 cut(s)	744
Mly113I	GGCGCC	1 cut(s)	417
MlyI	GAGTC	2 cut(s)	1168, 1658
MmeI	TCCRAC	5 cut(s)	261, 351, 1073, 1269, 1325
Mph1103I	ATGCAT	2 cut(s)	1401, 1578
MroXI	GAANNNNTTC	1 cut(s)	928
MseI	TTAA	6 cut(s)	12, 143, 504, 528, 1154, 1449
MslI	CAYNNNNRTG	3 cut(s)	84, 373, 1404
MspA1I	CMGCKG	1 cut(s)	986
MspI	CCGG	6 cut(s)	164, 320, 434, 546, 1127, 1272
MspR9I	CCNGG	6 cut(s)	165, 321, 594, 792, 1066, 1560
MvaI	CCWGG	4 cut(s)	594, 792, 1066, 1560
MvnI	CGCG	1 cut(s)	746
MwoI	GCNNNNNNNGC	7 cut(s)	135, 470, 548, 857, 1028, 1118, 1145
NarI	GGCGCC	1 cut(s)	417
NciI	CCSGG	2 cut(s)	165, 321
NcoI	CCATGG	2 cut(s)	275, 1405
NdeI	CATATG	2 cut(s)	469, 1677
NdeII	GATC	4 cut(s)	323, 553, 1068, 1486
NheI	GCTAGC	1 cut(s)	1148
NlaIII	CATG	9 cut(s)	279, 416, 501, 688, 784, 850, 1078, 1409, 1598
NlaIV	GGNNCC	4 cut(s)	168, 325, 418, 1366
NmeAIII	GCCGAG	1 cut(s)	291
NmuCI	GTSAC	3 cut(s)	235, 733, 814
NsiI	ATGCAT	2 cut(s)	1401, 1578
NspI	RCATGY	1 cut(s)	1598
OliI	CACNNNNGTG	1 cut(s)	373
PaeI	GCATGC	1 cut(s)	1598
PagI	TCATGA	2 cut(s)	684, 780
PaqCI	CACCTGC	1 cut(s)	1678
PciSI	GCTCTTC	1 cut(s)	128
PdmI	GAANNNNTTC	1 cut(s)	928
PfeI	GAWTC	2 cut(s)	313, 1542
PflMI	CCANNNNNTGG	2 cut(s)	246, 802
PfoI	TCCNGGA	1 cut(s)	1558
PinAI	ACCGGT	1 cut(s)	545
PkrI	GCNGC	7 cut(s)	71, 76, 128, 264, 836, 988, 1147
PleI	GAGTC	2 cut(s)	1168, 1657
PluTI	GGCGCC	1 cut(s)	420
PmaCI	CACGTG	1 cut(s)	401
PmlI	CACGTG	1 cut(s)	401
PpsI	GAGTC	2 cut(s)	1168, 1657
Ppu21I	YACGTR	1 cut(s)	401
Psp6I	CCWGG	4 cut(s)	592, 790, 1064, 1558
PspCI	CACGTG	1 cut(s)	401
PspEI	GGTNACC	2 cut(s)	733, 814
PspFI	CCCAGC	3 cut(s)	5, 956, 1121
PspGI	CCWGG	4 cut(s)	592, 790, 1064, 1558
PspN4I	GGNNCC	4 cut(s)	168, 325, 418, 1366
PspPI	GGNCC	4 cut(s)	167, 287, 1124, 1365
PstNI	CAGNNNCTG	1 cut(s)	989
PsuI	RGATCY	3 cut(s)	323, 553, 1068
PvuII	CAGCTG	1 cut(s)	986
RsaI	GTAC	2 cut(s)	776, 1291
RsaNI	GTAC	2 cut(s)	775, 1290
RseI	CAYNNNNRTG	3 cut(s)	84, 373, 1404
SalI	GTCGAC	1 cut(s)	1651
SapI	GCTCTTC	1 cut(s)	128
SaqAI	TTAA	6 cut(s)	12, 143, 504, 528, 1154, 1449
SatI	GCNGC	7 cut(s)	70, 75, 127, 263, 835, 987, 1146
Sau3AI	GATC	4 cut(s)	323, 553, 1068, 1486
Sau96I	GGNCC	4 cut(s)	167, 287, 1124, 1365
SchI	GAGTC	2 cut(s)	1168, 1658
ScrFI	CCNGG	6 cut(s)	165, 321, 594, 792, 1066, 1560
SfaNI	GCATC	5 cut(s)	36, 147, 559, 629, 1408
SfoI	GGCGCC	1 cut(s)	418
SinI	GGWCC	2 cut(s)	287, 1365
SmiMI	CAYNNNNRTG	3 cut(s)	84, 373, 1404
SphI	GCATGC	1 cut(s)	1598
Sse9I	AATT	7 cut(s)	109, 483, 525, 1098, 1264, 1444, 1477
SsiI	CCGC	3 cut(s)	156, 1002, 1250
SspDI	GGCGCC	1 cut(s)	416
SspMI	CTAG	2 cut(s)	44, 1149
StyD4I	CCNGG	6 cut(s)	163, 319, 592, 790, 1064, 1558
StyI	CCWWGG	4 cut(s)	220, 275, 1360, 1405
TaiI	ACGT	4 cut(s)	207, 213, 403, 810
TaqI	TCGA	2 cut(s)	919, 1652
TasI	AATT	7 cut(s)	109, 483, 525, 1098, 1264, 1444, 1477
TfiI	GAWTC	2 cut(s)	313, 1542
Tru1I	TTAA	6 cut(s)	12, 143, 504, 528, 1154, 1449
Tru9I	TTAA	6 cut(s)	12, 143, 504, 528, 1154, 1449
TscAI	CASTG	7 cut(s)	153, 311, 361, 375, 735, 1048, 1621
TseFI	GTSAC	3 cut(s)	235, 733, 814
TseI	GCWGC	7 cut(s)	69, 74, 126, 262, 834, 986, 1145
Tsp45I	GTSAC	3 cut(s)	235, 733, 814
TspDTI	ATGAA	6 cut(s)	233, 401, 486, 701, 1107, 1612
TspGWI	ACGGA	3 cut(s)	267, 939, 1539
TspRI	CASTG	7 cut(s)	153, 311, 361, 375, 735, 1048, 1621
Van91I	CCANNNNNTGG	2 cut(s)	246, 802
VpaK11BI	GGWCC	2 cut(s)	287, 1365
XapI	RAATTY	3 cut(s)	109, 1098, 1444
XceI	RCATGY	1 cut(s)	1598
XcmI	CCANNNNNNNNNTGG	3 cut(s)	227, 1524, 1606
XmiI	GTMKAC	1 cut(s)	1652
XmnI	GAANNNNTTC	1 cut(s)	928
XspI	CTAG	2 cut(s)	44, 1149
Zsp2I	ATGCAT	2 cut(s)	1401, 1578

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.