Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004220

Physical Location & Seq

Genomic Coordinates Reverse (-)

37989273 .. 37994208

Gene Structure 4936 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00195550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGCTGGGTTTAACAAAATGGGCTGCATCTTGACTGCTTTTCTAGGGTTTATGTTTCTGCAACTTTGCAGCGCTACCCATTATTATGATTGGGTTCTGAAAGAAACAAATTTTACAAGGCTTTGCAGCACGAAGAGCATCTTAACAGTGAATGGGGGTTTTCCGGGGCCAGCCATTCAAGTTCACAAAGGAGAAACTATTTACGTCAACATCCGCAACCAAGGATTATATGGTGTCACCATTCATTGGCACGGAGTGAAGCAGCCGAGAAATCCATGGTCGGATGGGCCTGAGAACATAACTCAGTGCCCGATTCAACCGGGATCTAACTTTACCTACGAGGTTGTATTTTCCAGTGAAGAAGGAACATTATGGTGGCATGCTCATAGTGATTGGACACGTGCTACTGTTCATGGCGCCATTGTTGTATTACCGGCTGCCGGCACGACATATCCATTTGCAACTCCATATGCACAGCAAACAATTATTTTAGCTTCATGGTTTAAGGCAGATGTGATGGAAGTAATTAACTCTGCACTCGCAACCGGTGCAGATCCAAACACCTCTGATGCCTTCACAATCAATGGACAGCCTGGGGATTTATACAGTTGCTCCAAGGCATCAACATACCGTTTGTTGGTTGACTACGGCAAGACCTATATGCTACGCATAATCAACGCTATCATGAACGAAGAACAGTTTTTCGCCATTGCCAACCACAACCTCACGGTGGTCACCCAAGACGCGTCCTACATAAAACCGATCACCACCCCGTACATCATGATAACTCCAGGCCAAACTATGGATGTTTTGGTCACCACAAACCAGCCTCGCAGCCATTACTACATGGCTTCAACTGCTTACAATGACGGCGATGTTCCATATCACAACGGCACAACCACGGCCATTCTTCAATATCGAGGAAACTATTCCACCCCATCAACCACTCCGTTTCCCAACCTTCCTATCCATAATGACACAACAGTGCTTGACAACTTCACCGCCCGTGTGAAGTCTTTGGCAAGCAAGGCACACCCTATCGGTGTTCCAACAAACATCACGACCAGGATCTACATGACTATTTCTATCAATGAACGGATTTGTGCTAACGCTTCTTGTGCTGGGCCGGATAATAATGCCATTGCTGCTAGCTTAAACAACATTAGTTTTGAGACTCCCTCCATTGATATACTACAAGCTTATTATAGGGGAATAAATGGAGTTTTTCAGGGCAACTTCCCATCCAACCCGCCTCTTTTTTTCAATTTCACCGGAGAAGTGGTAAACAGTACCAAATATCCGACCTTCGCAACCAAAGTAAAGTTCCTCAAATATGGTGAAGGAGTTGAAATAATCTTCCAAGGGACCAACCTCATTGCTCCCGAGAACCATCCAATGCATCTCCATGGTTTTAGTTTTTATTTGGTTGGAACAGGTTACGGGAATTTTAACAAAGCCACCTCACCTAAAACATACAATTTGGTTGATCCACCGAAGCCAACACCATTGGCGTTCCAAAGAACGGATGGGCTACCGTCGATTCATAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

516

Amino Acids

56.93

Weight (kDa)

6.75

Isoelectric Point (pI)

32.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 146	1.9e-38	Multicopper oxidase
Cu-oxidase	PF00394	160 - 309	2.2e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	414 - 499	2.1e-14	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004220)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g12610 FvH4_2g12610 FvH4_2g21650
malus_domestica	MD00G1014800.v1.1 MD00G1190700.v1.1 MD02G1264400.v1.1 MD10G1042600.v1.1
prunus_persica	Prupe.8G047100_v2.0.a1 Prupe.8G047200_v2.0.a1 Prupe.8G047300_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047900_v2.0.a1 Prupe.8G048100_v2.0.a1
pyrus_communis	pycom05g02900 pycom10g02970
rosa_chinensis	RchiOBHm_Chr6g0273201 RchiOBHm_Chr6g0288321
rosa_laevigata	RLG00000012414 RLG00000013632 RLG00000013639
rosa_multiflora	Rmu_sc0000239.1_g000090
rosa_roxburghii	Rroxscaffold_7G00180140 Rroxscaffold_7G00195550
rosa_rugosa	Rorug06G0073100 Rorug06G0195600
rosa_samantha	Rh6BG192200 Rh6BG312600 Rh6CG191600 Rh6CG320400 Rh6DG183000 Rh6DG305600
rosa_wichuraiana	Rw6G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	416
AccB7I	CCANNNNNTGG	2 cut(s)	246, 802
AccII	CGCG	1 cut(s)	746
AciI	CCGC	3 cut(s)	214, 1002, 1250
AclWI	GGATC	4 cut(s)	331, 548, 1076, 1481
AcoI	YGGCCR	1 cut(s)	903
AcsI	RAATTY	2 cut(s)	109, 1444
AcvI	CACGTG	1 cut(s)	401
AcyI	GRCGYC	1 cut(s)	417
AdeI	CACNNNGTG	1 cut(s)	256
AfaI	GTAC	2 cut(s)	776, 1291
AfeI	AGCGCT	1 cut(s)	73
AfiI	CCNNNNNNNGG	6 cut(s)	246, 440, 637, 730, 802, 1522
AflIII	ACRYGT	2 cut(s)	398, 744
AgeI	ACCGGT	1 cut(s)	545
AgsI	TTSAA	6 cut(s)	179, 317, 855, 914, 1264, 1349
AjnI	CCWGG	3 cut(s)	592, 790, 1064
AjuI	GAANNNNNNNTTGG	2 cut(s)	1307, 1339
AleI	CACNNNNGTG	1 cut(s)	983
AluBI	AGCT	4 cut(s)	494, 1152, 1199, 1548
AluI	AGCT	4 cut(s)	494, 1152, 1199, 1548
Alw26I	GTCTC	1 cut(s)	1166
AlwI	GGATC	4 cut(s)	331, 548, 1076, 1481
Ama87I	CYCGRG	1 cut(s)	1382
Aor51HI	AGCGCT	1 cut(s)	73
AoxI	GGCC	5 cut(s)	167, 287, 793, 903, 1124
ApeKI	GCWGC	7 cut(s)	24, 69, 126, 262, 437, 834, 1145
ApoI	RAATTY	2 cut(s)	109, 1444
AsiGI	ACCGGT	1 cut(s)	545
Asp700I	GAANNNNTTC	1 cut(s)	928
AspLEI	GCGC	2 cut(s)	74, 419
AspS9I	GGNCC	4 cut(s)	167, 287, 1124, 1365
AsuC2I	CCSGG	2 cut(s)	165, 321
AsuHPI	GGTGA	8 cut(s)	229, 727, 757, 808, 991, 1261, 1349, 1455
AsuNHI	GCTAGC	1 cut(s)	1148
AvaI	CYCGRG	1 cut(s)	1382
AvaII	GGWCC	1 cut(s)	1365
BaeGI	GKGCMC	1 cut(s)	311
BanI	GGYRCC	1 cut(s)	416
BbrPI	CACGTG	1 cut(s)	401
BbvI	GCAGC	7 cut(s)	11, 81, 138, 274, 424, 846, 1132
BccI	CCATC	6 cut(s)	278, 511, 946, 1249, 1398, 1520
BceAI	ACGGC	4 cut(s)	664, 886, 907, 918
BciT130I	CCWGG	3 cut(s)	594, 792, 1066
BcnI	CCSGG	2 cut(s)	165, 321
BcoDI	GTCTC	1 cut(s)	1166
BfaI	CTAG	2 cut(s)	44, 1149
BfoI	RGCGCY	2 cut(s)	75, 420
BisI	GCNGC	7 cut(s)	25, 70, 127, 263, 438, 835, 1146
BlsI	GCNGC	7 cut(s)	26, 71, 128, 264, 439, 836, 1147
Bme1390I	CCNGG	5 cut(s)	165, 321, 594, 792, 1066
Bme18I	GGWCC	1 cut(s)	1365
BmeT110I	CYCGRG	1 cut(s)	1382
BmgT120I	GGNCC	4 cut(s)	167, 287, 1124, 1365
BmiI	GGNNCC	3 cut(s)	168, 418, 1366
BmrFI	CCNGG	5 cut(s)	165, 321, 594, 792, 1066
BmsI	GCATC	5 cut(s)	36, 147, 559, 629, 1408
BmtI	GCTAGC	1 cut(s)	1152
BplI	GAGNNNNNCTC	2 cut(s)	1163, 1195
BpmI	CTGGAG	1 cut(s)	774
BpuMI	CCSGG	2 cut(s)	165, 321
BsaAI	YACGTR	1 cut(s)	401
BsaHI	GRCGYC	1 cut(s)	417
BsaJI	CCNNGG	8 cut(s)	164, 220, 275, 593, 615, 900, 1360, 1405
BsaWI	WCCGGW	2 cut(s)	545, 1271
BsaXI	ACNNNNNCTCC	4 cut(s)	596, 626, 1266, 1296
Bsc4I	CCNNNNNNNGG	6 cut(s)	246, 440, 637, 730, 802, 1522
Bse118I	RCCGGY	3 cut(s)	433, 440, 545
Bse1I	ACTGG	1 cut(s)	354
Bse3DI	GCAATG	3 cut(s)	708, 1140, 1374
BseBI	CCWGG	3 cut(s)	594, 792, 1066
BseDI	CCNNGG	8 cut(s)	164, 220, 275, 593, 615, 900, 1360, 1405
BseGI	GGATG	6 cut(s)	210, 289, 811, 1241, 1390, 1531
BseLI	CCNNNNNNNGG	6 cut(s)	246, 440, 637, 730, 802, 1522
BseMI	GCAATG	3 cut(s)	708, 1140, 1374
BseMII	CTCAG	2 cut(s)	282, 317
BseNI	ACTGG	1 cut(s)	354
BseSI	GKGCMC	1 cut(s)	311
BseXI	GCAGC	7 cut(s)	11, 81, 138, 274, 424, 846, 1132
BseYI	CCCAGC	2 cut(s)	5, 1121
BsgI	GTGCAG	2 cut(s)	519, 570
Bsh1236I	CGCG	1 cut(s)	746
BshFI	GGCC	5 cut(s)	169, 289, 795, 905, 1126
BshNI	GGYRCC	1 cut(s)	416
BshTI	ACCGGT	1 cut(s)	545
BsiHKCI	CYCGRG	1 cut(s)	1382
BsiSI	CCGG	7 cut(s)	164, 320, 434, 441, 546, 1127, 1272
BslFI	GGGAC	1 cut(s)	1378
BslI	CCNNNNNNNGG	6 cut(s)	246, 440, 637, 730, 802, 1522
BsmAI	GTCTC	1 cut(s)	1166
BsmFI	GGGAC	1 cut(s)	1378
BsnI	GGCC	5 cut(s)	169, 289, 795, 905, 1126
BsoBI	CYCGRG	1 cut(s)	1382
Bsp1286I	GDGCHC	1 cut(s)	311
Bsp143I	GATC	5 cut(s)	323, 553, 762, 1068, 1486
Bsp19I	CCATGG	2 cut(s)	275, 1405
BspACI	CCGC	3 cut(s)	214, 1002, 1250
BspANI	GGCC	5 cut(s)	169, 289, 795, 905, 1126
BspCNI	CTCAG	2 cut(s)	283, 316
BspFNI	CGCG	1 cut(s)	746
BspHI	TCATGA	2 cut(s)	684, 780
BspLI	GGNNCC	3 cut(s)	168, 418, 1366
BspOI	GCTAGC	1 cut(s)	1152
BspPI	GGATC	4 cut(s)	331, 548, 1076, 1481
BspQI	GCTCTTC	1 cut(s)	128
BspT107I	GGYRCC	1 cut(s)	416
BsrDI	GCAATG	3 cut(s)	708, 1140, 1374
BsrFI	RCCGGY	3 cut(s)	433, 440, 545
BsrI	ACTGG	1 cut(s)	354
BssAI	RCCGGY	3 cut(s)	433, 440, 545
BssECI	CCNNGG	8 cut(s)	164, 220, 275, 593, 615, 900, 1360, 1405
BssMI	GATC	5 cut(s)	323, 553, 762, 1068, 1486
BssNI	GRCGYC	1 cut(s)	417
BssT1I	CCWWGG	5 cut(s)	220, 275, 615, 1360, 1405
Bst2UI	CCWGG	3 cut(s)	594, 792, 1066
Bst4CI	ACNGT	9 cut(s)	148, 409, 608, 632, 699, 730, 985, 1289, 1536
Bst6I	CTCTTC	1 cut(s)	128
BstACI	GRCGYC	1 cut(s)	417
BstAPI	GCANNNNNTGC	1 cut(s)	548
BstBAI	YACGTR	1 cut(s)	401
BstC8I	GCNNGC	5 cut(s)	171, 381, 442, 1024, 1150
BstDEI	CTNAG	2 cut(s)	291, 303
BstDSI	CCRYGG	3 cut(s)	275, 900, 1405
BstEII	GGTNACC	2 cut(s)	733, 814
BstF5I	GGATG	6 cut(s)	210, 289, 811, 1241, 1390, 1531
BstFNI	CGCG	1 cut(s)	746
BstH2I	RGCGCY	2 cut(s)	75, 420
BstHHI	GCGC	2 cut(s)	74, 419
BstKTI	GATC	5 cut(s)	326, 556, 765, 1071, 1489
BstMAI	GTCTC	1 cut(s)	1166
BstMBI	GATC	5 cut(s)	323, 553, 762, 1068, 1486
BstMWI	GCNNNNNNNGC	6 cut(s)	135, 548, 857, 1028, 1118, 1145
BstNI	CCWGG	3 cut(s)	594, 792, 1066
BstNSI	RCATGY	1 cut(s)	383
BstPI	GGTNACC	2 cut(s)	733, 814
BstSCI	CCNGG	5 cut(s)	163, 319, 592, 790, 1064
BstSLI	GKGCMC	1 cut(s)	311
BstUI	CGCG	1 cut(s)	746
BstV1I	GCAGC	7 cut(s)	11, 81, 138, 274, 424, 846, 1132
BstX2I	RGATCY	3 cut(s)	323, 553, 1068
BstYI	RGATCY	3 cut(s)	323, 553, 1068
BsuRI	GGCC	5 cut(s)	169, 289, 795, 905, 1126
BtgI	CCRYGG	3 cut(s)	275, 900, 1405
BtgZI	GCGATG	1 cut(s)	888
BtsCI	GGATG	6 cut(s)	210, 289, 811, 1241, 1390, 1531
BtsIMutI	CAGTG	4 cut(s)	153, 311, 361, 990
Cac8I	GCNNGC	5 cut(s)	171, 381, 442, 1024, 1150
CciI	TCATGA	2 cut(s)	684, 780
CfoI	GCGC	2 cut(s)	74, 419
Cfr10I	RCCGGY	3 cut(s)	433, 440, 545
Cfr13I	GGNCC	4 cut(s)	167, 287, 1124, 1365
CseI	GACGC	2 cut(s)	735, 752
Csp6I	GTAC	2 cut(s)	775, 1290
CspAI	ACCGGT	1 cut(s)	545
CviAII	CATG	9 cut(s)	276, 380, 413, 498, 685, 781, 847, 1075, 1406
CviQI	GTAC	2 cut(s)	775, 1290
DdeI	CTNAG	2 cut(s)	291, 303
DinI	GGCGCC	1 cut(s)	418
DpnI	GATC	5 cut(s)	325, 555, 764, 1070, 1488
DpnII	GATC	5 cut(s)	323, 553, 762, 1068, 1486
DraIII	CACNNNGTG	1 cut(s)	256
EaeI	YGGCCR	1 cut(s)	903
Eam1104I	CTCTTC	1 cut(s)	128
EarI	CTCTTC	1 cut(s)	128
Eco130I	CCWWGG	5 cut(s)	220, 275, 615, 1360, 1405
Eco47I	GGWCC	1 cut(s)	1365
Eco47III	AGCGCT	1 cut(s)	73
Eco72I	CACGTG	1 cut(s)	401
Eco88I	CYCGRG	1 cut(s)	1382
Eco91I	GGTNACC	2 cut(s)	733, 814
EcoO65I	GGTNACC	2 cut(s)	733, 814
EcoRII	CCWGG	3 cut(s)	592, 790, 1064
EcoT14I	CCWWGG	5 cut(s)	220, 275, 615, 1360, 1405
EcoT22I	ATGCAT	1 cut(s)	1401
EgeI	GGCGCC	1 cut(s)	418
EheI	GGCGCC	1 cut(s)	418
ErhI	CCWWGG	5 cut(s)	220, 275, 615, 1360, 1405
FaeI	CATG	9 cut(s)	279, 383, 416, 501, 688, 784, 850, 1078, 1409
FalI	AAGNNNNNCTT	2 cut(s)	125, 157
FaqI	GGGAC	1 cut(s)	1378
FatI	CATG	9 cut(s)	275, 379, 412, 497, 684, 780, 846, 1074, 1405
FauI	CCCGC	1 cut(s)	1257
FauNDI	CATATG	1 cut(s)	469
Fnu4HI	GCNGC	7 cut(s)	25, 70, 127, 263, 438, 835, 1146
FokI	GGATG	6 cut(s)	197, 296, 818, 1228, 1377, 1538
Fsp4HI	GCNGC	7 cut(s)	25, 70, 127, 263, 438, 835, 1146
FspBI	CTAG	2 cut(s)	44, 1149
GlaI	GCGC	2 cut(s)	73, 418
GluI	GCNGC	7 cut(s)	25, 70, 127, 263, 438, 835, 1146
GsaI	CCCAGC	2 cut(s)	9, 1125
GsuI	CTGGAG	1 cut(s)	774
HaeII	RGCGCY	2 cut(s)	75, 420
HaeIII	GGCC	5 cut(s)	169, 289, 795, 905, 1126
HapII	CCGG	7 cut(s)	164, 320, 434, 441, 546, 1127, 1272
HgaI	GACGC	2 cut(s)	735, 752
HhaI	GCGC	2 cut(s)	74, 419
Hin1I	GRCGYC	1 cut(s)	417
Hin1II	CATG	9 cut(s)	279, 383, 416, 501, 688, 784, 850, 1078, 1409
Hin6I	GCGC	2 cut(s)	72, 417
HinP1I	GCGC	2 cut(s)	72, 417
HincII	GTYRAC	2 cut(s)	208, 643
HindII	GTYRAC	2 cut(s)	208, 643
HindIII	AAGCTT	1 cut(s)	1197
HinfI	GANTC	3 cut(s)	313, 1174, 1540
HpaII	CCGG	7 cut(s)	164, 320, 434, 441, 546, 1127, 1272
HphI	GGTGA	8 cut(s)	229, 727, 757, 808, 991, 1261, 1349, 1455
Hpy166II	GTNNAC	4 cut(s)	184, 208, 643, 1285
Hpy188I	TCNGA	4 cut(s)	99, 283, 568, 1302
Hpy188III	TCNNGA	5 cut(s)	31, 685, 781, 1060, 1382
Hpy8I	GTNNAC	4 cut(s)	184, 208, 643, 1285
Hpy99I	CGWCG	1 cut(s)	1540
HpyAV	CCTTC	5 cut(s)	356, 583, 971, 1315, 1334
HpyCH4III	ACNGT	9 cut(s)	148, 409, 608, 632, 699, 730, 985, 1289, 1536
HpyCH4IV	ACGT	2 cut(s)	204, 400
HpyCH4V	TGCA	9 cut(s)	27, 61, 69, 126, 461, 473, 536, 551, 1399
HpyF10VI	GCNNNNNNNGC	6 cut(s)	135, 548, 857, 1028, 1118, 1145
HpyF3I	CTNAG	2 cut(s)	291, 303
HpySE526I	ACGT	2 cut(s)	204, 400
Hsp92I	GRCGYC	1 cut(s)	417
Hsp92II	CATG	9 cut(s)	279, 383, 416, 501, 688, 784, 850, 1078, 1409
HspAI	GCGC	2 cut(s)	72, 417
KasI	GGCGCC	1 cut(s)	416
KroI	GCCGGC	1 cut(s)	440
KroNI	GCCGGC	1 cut(s)	442
Kzo9I	GATC	5 cut(s)	323, 553, 762, 1068, 1486
LguI	GCTCTTC	1 cut(s)	128
LmnI	GCTCC	2 cut(s)	617, 1384
Lsp1109I	GCAGC	7 cut(s)	11, 81, 138, 274, 424, 846, 1132
LweI	GCATC	5 cut(s)	36, 147, 559, 629, 1408
MaeI	CTAG	2 cut(s)	44, 1149
MaeII	ACGT	2 cut(s)	204, 400
MaeIII	GTNAC	4 cut(s)	235, 733, 814, 1436
MalI	GATC	5 cut(s)	325, 555, 764, 1070, 1488
MboI	GATC	5 cut(s)	323, 553, 762, 1068, 1486
MboII	GAAGA	5 cut(s)	145, 371, 704, 902, 1348
MflI	RGATCY	3 cut(s)	323, 553, 1068
MhlI	GDGCHC	1 cut(s)	311
MluCI	AATT	6 cut(s)	109, 483, 525, 1264, 1444, 1477
MluI	ACGCGT	1 cut(s)	744
Mly113I	GGCGCC	1 cut(s)	417
MlyI	GAGTC	1 cut(s)	1168
MmeI	TCCRAC	5 cut(s)	261, 1073, 1269, 1325, 1408
Mph1103I	ATGCAT	1 cut(s)	1401
MroNI	GCCGGC	1 cut(s)	440
MroXI	GAANNNNTTC	1 cut(s)	928
MseI	TTAA	6 cut(s)	12, 143, 504, 528, 1154, 1449
MslI	CAYNNNNRTG	4 cut(s)	84, 373, 983, 1404
MspI	CCGG	7 cut(s)	164, 320, 434, 441, 546, 1127, 1272
MspR9I	CCNGG	5 cut(s)	165, 321, 594, 792, 1066
MvaI	CCWGG	3 cut(s)	594, 792, 1066
MvnI	CGCG	1 cut(s)	746
MwoI	GCNNNNNNNGC	6 cut(s)	135, 548, 857, 1028, 1118, 1145
NaeI	GCCGGC	1 cut(s)	442
NarI	GGCGCC	1 cut(s)	417
NciI	CCSGG	2 cut(s)	165, 321
NcoI	CCATGG	2 cut(s)	275, 1405
NdeI	CATATG	1 cut(s)	469
NdeII	GATC	5 cut(s)	323, 553, 762, 1068, 1486
NgoMIV	GCCGGC	1 cut(s)	440
NheI	GCTAGC	1 cut(s)	1148
NlaIII	CATG	9 cut(s)	279, 383, 416, 501, 688, 784, 850, 1078, 1409
NlaIV	GGNNCC	3 cut(s)	168, 418, 1366
NmeAIII	GCCGAG	1 cut(s)	291
NmuCI	GTSAC	3 cut(s)	235, 733, 814
NsiI	ATGCAT	1 cut(s)	1401
NspI	RCATGY	1 cut(s)	383
OliI	CACNNNNGTG	1 cut(s)	983
PaeI	GCATGC	1 cut(s)	383
PagI	TCATGA	2 cut(s)	684, 780
PciSI	GCTCTTC	1 cut(s)	128
PdiI	GCCGGC	1 cut(s)	442
PdmI	GAANNNNTTC	1 cut(s)	928
PfeI	GAWTC	2 cut(s)	313, 1540
PflMI	CCANNNNNTGG	2 cut(s)	246, 802
PinAI	ACCGGT	1 cut(s)	545
PkrI	GCNGC	7 cut(s)	26, 71, 128, 264, 439, 836, 1147
PleI	GAGTC	1 cut(s)	1168
PluTI	GGCGCC	1 cut(s)	420
PmaCI	CACGTG	1 cut(s)	401
PmlI	CACGTG	1 cut(s)	401
PpsI	GAGTC	1 cut(s)	1168
Ppu21I	YACGTR	1 cut(s)	401
Psp6I	CCWGG	3 cut(s)	592, 790, 1064
PspCI	CACGTG	1 cut(s)	401
PspEI	GGTNACC	2 cut(s)	733, 814
PspFI	CCCAGC	2 cut(s)	5, 1121
PspGI	CCWGG	3 cut(s)	592, 790, 1064
PspN4I	GGNNCC	3 cut(s)	168, 418, 1366
PspPI	GGNCC	4 cut(s)	167, 287, 1124, 1365
PsuI	RGATCY	3 cut(s)	323, 553, 1068
RsaI	GTAC	2 cut(s)	776, 1291
RsaNI	GTAC	2 cut(s)	775, 1290
RseI	CAYNNNNRTG	4 cut(s)	84, 373, 983, 1404
SapI	GCTCTTC	1 cut(s)	128
SaqAI	TTAA	6 cut(s)	12, 143, 504, 528, 1154, 1449
SatI	GCNGC	7 cut(s)	25, 70, 127, 263, 438, 835, 1146
Sau3AI	GATC	5 cut(s)	323, 553, 762, 1068, 1486
Sau96I	GGNCC	4 cut(s)	167, 287, 1124, 1365
SchI	GAGTC	1 cut(s)	1168
ScrFI	CCNGG	5 cut(s)	165, 321, 594, 792, 1066
SduI	GDGCHC	1 cut(s)	311
SfaNI	GCATC	5 cut(s)	36, 147, 559, 629, 1408
SfoI	GGCGCC	1 cut(s)	418
SinI	GGWCC	1 cut(s)	1365
SmiMI	CAYNNNNRTG	4 cut(s)	84, 373, 983, 1404
SphI	GCATGC	1 cut(s)	383
Sse9I	AATT	6 cut(s)	109, 483, 525, 1264, 1444, 1477
SsiI	CCGC	3 cut(s)	214, 1002, 1250
SspDI	GGCGCC	1 cut(s)	416
SspMI	CTAG	2 cut(s)	44, 1149
StyD4I	CCNGG	5 cut(s)	163, 319, 592, 790, 1064
StyI	CCWWGG	5 cut(s)	220, 275, 615, 1360, 1405
TaaI	ACNGT	9 cut(s)	148, 409, 608, 632, 699, 730, 985, 1289, 1536
TaiI	ACGT	2 cut(s)	207, 403
TaqI	TCGA	2 cut(s)	919, 1538
TasI	AATT	6 cut(s)	109, 483, 525, 1264, 1444, 1477
TfiI	GAWTC	2 cut(s)	313, 1540
Tru1I	TTAA	6 cut(s)	12, 143, 504, 528, 1154, 1449
Tru9I	TTAA	6 cut(s)	12, 143, 504, 528, 1154, 1449
TscAI	CASTG	4 cut(s)	153, 311, 361, 990
TseFI	GTSAC	3 cut(s)	235, 733, 814
TseI	GCWGC	7 cut(s)	24, 69, 126, 262, 437, 834, 1145
Tsp45I	GTSAC	3 cut(s)	235, 733, 814
TspDTI	ATGAA	6 cut(s)	233, 401, 486, 701, 1107, 1532
TspGWI	ACGGA	4 cut(s)	267, 939, 1111, 1538
TspRI	CASTG	4 cut(s)	153, 311, 361, 990
Van91I	CCANNNNNTGG	2 cut(s)	246, 802
VpaK11BI	GGWCC	1 cut(s)	1365
XapI	RAATTY	2 cut(s)	109, 1444
XceI	RCATGY	1 cut(s)	383
XcmI	CCANNNNNNNNNTGG	2 cut(s)	227, 1523
XmnI	GAANNNNTTC	1 cut(s)	928
XspI	CTAG	2 cut(s)	44, 1149
Zsp2I	ATGCAT	1 cut(s)	1401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.