Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000239.1

Orthogroup ID

OG0004220

Physical Location & Seq

Genomic Coordinates Reverse (-)

517107 .. 523179

Gene Structure 6073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000239.1_g000090.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ctgaaacactggaaacaacacaacaccagcaaggcccaaaaacaaaggcccaggccaaccatcgcttcccccaacagagagcaagcgcagtcgacaaccattcccgtcgccaacgatctccattgtcatgtctccgcaaccttgactcacctcgtcgcctcgccgcatccctacgccgctactctgcttggccaagttgcaaacagaaacgacactgtgttgacaacctcaaccagatccaaacccaagactgaaacagatccccacgggcatcacctctgcagagtttcgatctcctctaccacagcccagatatccgagtcagaaactccatatcccaccgccggaaagaagcaactcgtcgctacaccacaccctccgtcgcccttgatccgagagggacaacacaatctgcccaacccgagatcaaaaacccatcctccttccctggactgcacctctgctctgaaggctcgccattatttagaatcaacatcctcgatctgccgagccggaagcgcggcggcgaaattgccggtagcgttcgtgtttatgtttctgcaactttgcagcgctacccgttactatgattgggttctgcaagaaaaaaattttacaaggctttgcagcacgaagagcatcttaacagtgaatgggggttttccggggccagccattcaagttcacaaaggagaaactatttacgtcaacatccgcaaccaaggattatatggtgtcaccattcattggcacggagtgaagcagccgagaaatccgtggtcggatggacctgagaacataactcagtgcccgattcaaccgggatctaactttacctacgaggttgtattttccagtgaagaaggaacattatggtggcacgctcatagtgattggacacgtgctactgttcatggcgccattgttgtattaccggctgccggcacgacatatccatttgcaactccatatgcacagcaaacaattattttagcttcatggtttaaggcagatgtgatggaagtaattaactctgcactcgcaaccggtgcagatccaaacacctctgatgccttcacaatcaatggacagcctggggacttatacaattgctccaaggcatcaacataccgtttgttggttgactacggcaagacatatatgctacgcataatcaacgctatcatgaacgaagaacagtttttcgccattgccaaccacaacctcacagtggtcacccaagacgcgtcctacataaaacccatcaccaccccgtacatcatgataactccaggccaaactatggacgttttggtcaccacaaaccagcctcgcagccattactacatggcttcaactgcttacaatgacggcgatgttccatatcacaacggcacaaccacggccattcttcaatatcgaggaaactattccaccccatcaaccactccgttacccaaccttcctatccataatgacacaacagctgctgacaacttcaccgcccgtgtgaagtctttggcaagcaaggcacaccccatcagtgttccgacaaacatcacgaccaggatctacatgactgtttctatcaatgaacggatttgtgctaacgcttcttgtgccgggccgaataataatgccattgctgctagcttaaacaacatcagttttgatactccctccattgatatactacaagcttattataggggaataaatggggtttttcagggcaacttcccatccaacccgcctctttttttcaatttcaccggagaagtggtaaacagtaccaaatatccgaccttcgcaaccaaagtaaagttcctcaaatatggtgaaggagttgaaataatcttccaagggaccaacctcgttgctcctgagaaccatccaatgcatctccatggttttagtttttatttggttggaacaggttacgggaattttaacaaagccacctcacctaaaacatacaatttggttgatccaccagaagccaacaccattggcgttccaaagaacggatgggctaccatcagattcgtagctgataatcctggagtatggtttatgcattgtcatttggaaaggcatgccagttggggaatggacactgtgttcatagtaaggaatggaaacacggaagagtcgaagcttcgcccaccacctgcccatatgcctccttgctccaagtcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

733

Amino Acids

80.68

Weight (kDa)

8.86

Isoelectric Point (pI)

38.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004220)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g12610 FvH4_2g12610 FvH4_2g21650
malus_domestica	MD00G1014800.v1.1 MD00G1190700.v1.1 MD02G1264400.v1.1 MD10G1042600.v1.1
prunus_persica	Prupe.8G047100_v2.0.a1 Prupe.8G047200_v2.0.a1 Prupe.8G047300_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047900_v2.0.a1 Prupe.8G048100_v2.0.a1
pyrus_communis	pycom05g02900 pycom10g02970
rosa_chinensis	RchiOBHm_Chr6g0273201 RchiOBHm_Chr6g0288321
rosa_laevigata	RLG00000012414 RLG00000013632 RLG00000013639
rosa_multiflora	Rmu_sc0000239.1_g000090
rosa_roxburghii	Rroxscaffold_7G00180140 Rroxscaffold_7G00195550
rosa_rugosa	Rorug06G0073100 Rorug06G0195600
rosa_samantha	Rh6BG192200 Rh6BG312600 Rh6CG191600 Rh6CG320400 Rh6DG183000 Rh6DG305600
rosa_wichuraiana	Rw6G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2179
AasI	GACNNNNNNGTC	1 cut(s)	1313
Acc36I	ACCTGC	1 cut(s)	2179
AccB1I	GGYRCC	1 cut(s)	917
AccB7I	CCANNNNNTGG	2 cut(s)	747, 1303
AccI	GTMKAC	1 cut(s)	92
AccII	CGCG	2 cut(s)	521, 1247
AciI	CCGC	9 cut(s)	135, 164, 177, 342, 521, 524, 715, 1503, 1751
AclWI	GGATC	7 cut(s)	231, 254, 385, 832, 1049, 1577, 1982
AcoI	YGGCCR	2 cut(s)	190, 1404
AcsI	RAATTY	2 cut(s)	610, 1945
AcuI	CTGAAG	1 cut(s)	488
AcvI	CACGTG	1 cut(s)	902
AcyI	GRCGYC	1 cut(s)	918
AdeI	CACNNNGTG	1 cut(s)	757
AfaI	GTAC	2 cut(s)	1277, 1792
AfeI	AGCGCT	1 cut(s)	574
AfiI	CCNNNNNNNGG	7 cut(s)	344, 747, 941, 1138, 1231, 1303, 2024
AflIII	ACRYGT	2 cut(s)	899, 1245
AgeI	ACCGGT	1 cut(s)	1046
AgsI	TTSAA	6 cut(s)	680, 818, 1356, 1415, 1765, 1850
AjnI	CCWGG	6 cut(s)	50, 447, 1093, 1291, 1565, 2059
AjuI	GAANNNNNNNTTGG	4 cut(s)	49, 81, 1808, 1840
AloI	GAACNNNNNNTCC	2 cut(s)	2105, 2137
AluBI	AGCT	6 cut(s)	995, 1487, 1653, 1700, 2051, 2158
AluI	AGCT	6 cut(s)	995, 1487, 1653, 1700, 2051, 2158
Alw26I	GTCTC	1 cut(s)	136
AlwI	GGATC	7 cut(s)	231, 254, 385, 832, 1049, 1577, 1982
AlwNI	CAGNNNCTG	1 cut(s)	1490
Ama87I	CYCGRG	1 cut(s)	421
Aor51HI	AGCGCT	1 cut(s)	574
AoxI	GGCC	8 cut(s)	33, 47, 53, 190, 668, 1294, 1404, 1625
ApeKI	GCWGC	7 cut(s)	570, 627, 763, 938, 1335, 1487, 1646
ApoI	RAATTY	2 cut(s)	610, 1945
AsiGI	ACCGGT	1 cut(s)	1046
Asp700I	GAANNNNTTC	1 cut(s)	1429
AspLEI	GCGC	4 cut(s)	88, 521, 575, 920
AspS9I	GGNCC	6 cut(s)	34, 48, 668, 788, 1625, 1866
AsuC2I	CCSGG	3 cut(s)	666, 822, 1624
AsuNHI	GCTAGC	1 cut(s)	1649
AvaI	CYCGRG	1 cut(s)	421
AvaII	GGWCC	2 cut(s)	788, 1866
BaeGI	GKGCMC	1 cut(s)	812
BalI	TGGCCA	1 cut(s)	192
BanI	GGYRCC	1 cut(s)	917
BbrPI	CACGTG	1 cut(s)	902
BbvI	GCAGC	7 cut(s)	582, 639, 775, 925, 1347, 1474, 1633
BceAI	ACGGC	4 cut(s)	1165, 1387, 1408, 1419
BciT130I	CCWGG	6 cut(s)	52, 449, 1095, 1293, 1567, 2061
BcnI	CCSGG	3 cut(s)	666, 822, 1624
BcoDI	GTCTC	1 cut(s)	136
BfaI	CTAG	1 cut(s)	1650
BfmI	CTRYAG	1 cut(s)	280
BfoI	RGCGCY	2 cut(s)	576, 921
BfuAI	ACCTGC	1 cut(s)	2179
Bme1390I	CCNGG	9 cut(s)	52, 449, 666, 822, 1095, 1293, 1567, 1624, 2061
Bme18I	GGWCC	2 cut(s)	788, 1866
BmeT110I	CYCGRG	1 cut(s)	421
BmgT120I	GGNCC	6 cut(s)	34, 48, 668, 788, 1625, 1866
BmiI	GGNNCC	3 cut(s)	669, 919, 1867
BmrFI	CCNGG	9 cut(s)	52, 449, 666, 822, 1095, 1293, 1567, 1624, 2061
BmsI	GCATC	6 cut(s)	175, 280, 648, 1060, 1130, 1909
BmtI	GCTAGC	1 cut(s)	1653
BpmI	CTGGAG	2 cut(s)	1275, 2082
BpuMI	CCSGG	3 cut(s)	666, 822, 1624
BsaAI	YACGTR	1 cut(s)	902
BsaHI	GRCGYC	1 cut(s)	918
BsaWI	WCCGGW	2 cut(s)	1046, 1772
BsaXI	ACNNNNNCTCC	6 cut(s)	424, 454, 1097, 1127, 1767, 1797
Bsc4I	CCNNNNNNNGG	7 cut(s)	344, 747, 941, 1138, 1231, 1303, 2024
Bse118I	RCCGGY	4 cut(s)	535, 934, 941, 1046
Bse1I	ACTGG	3 cut(s)	14, 855, 2100
Bse3DI	GCAATG	2 cut(s)	1209, 1641
BseBI	CCWGG	6 cut(s)	52, 449, 1095, 1293, 1567, 2061
BseGI	GGATG	8 cut(s)	166, 436, 494, 711, 790, 1742, 1891, 2033
BseLI	CCNNNNNNNGG	7 cut(s)	344, 747, 941, 1138, 1231, 1303, 2024
BseMI	GCAATG	2 cut(s)	1209, 1641
BseMII	CTCAG	3 cut(s)	783, 818, 1875
BseNI	ACTGG	3 cut(s)	14, 855, 2100
BseRI	GAGGAG	1 cut(s)	286
BseSI	GKGCMC	1 cut(s)	812
BseXI	GCAGC	7 cut(s)	582, 639, 775, 925, 1347, 1474, 1633
BsgI	GTGCAG	3 cut(s)	439, 1020, 1071
Bsh1236I	CGCG	2 cut(s)	521, 1247
BshFI	GGCC	8 cut(s)	35, 49, 55, 192, 670, 1296, 1406, 1627
BshNI	GGYRCC	1 cut(s)	917
BshTI	ACCGGT	1 cut(s)	1046
BsiHKCI	CYCGRG	1 cut(s)	421
BslFI	GGGAC	3 cut(s)	414, 1112, 1879
BslI	CCNNNNNNNGG	7 cut(s)	344, 747, 941, 1138, 1231, 1303, 2024
BsmAI	GTCTC	1 cut(s)	136
BsmFI	GGGAC	3 cut(s)	414, 1112, 1879
BsnI	GGCC	8 cut(s)	35, 49, 55, 192, 670, 1296, 1406, 1627
BsoBI	CYCGRG	1 cut(s)	421
Bsp1286I	GDGCHC	1 cut(s)	812
Bsp19I	CCATGG	1 cut(s)	1906
BspACI	CCGC	9 cut(s)	135, 164, 177, 342, 521, 524, 715, 1503, 1751
BspANI	GGCC	8 cut(s)	35, 49, 55, 192, 670, 1296, 1406, 1627
BspCNI	CTCAG	3 cut(s)	784, 817, 1876
BspFNI	CGCG	2 cut(s)	521, 1247
BspHI	TCATGA	2 cut(s)	1185, 1281
BspLI	GGNNCC	3 cut(s)	669, 919, 1867
BspMAI	CTGCAG	1 cut(s)	284
BspMI	ACCTGC	1 cut(s)	2179
BspOI	GCTAGC	1 cut(s)	1653
BspPI	GGATC	7 cut(s)	231, 254, 385, 832, 1049, 1577, 1982
BspQI	GCTCTTC	1 cut(s)	629
BspT107I	GGYRCC	1 cut(s)	917
BsrDI	GCAATG	2 cut(s)	1209, 1641
BsrFI	RCCGGY	4 cut(s)	535, 934, 941, 1046
BsrI	ACTGG	3 cut(s)	14, 855, 2100
BssAI	RCCGGY	4 cut(s)	535, 934, 941, 1046
BssNI	GRCGYC	1 cut(s)	918
BssT1I	CCWWGG	4 cut(s)	721, 1116, 1861, 1906
Bst2UI	CCWGG	6 cut(s)	52, 449, 1095, 1293, 1567, 2061
Bst4CI	ACNGT	9 cut(s)	217, 649, 910, 1133, 1200, 1231, 1582, 1790, 2119
Bst6I	CTCTTC	2 cut(s)	629, 2142
BstACI	GRCGYC	1 cut(s)	918
BstAPI	GCANNNNNTGC	1 cut(s)	1049
BstBAI	YACGTR	1 cut(s)	902
BstC8I	GCNNGC	8 cut(s)	84, 475, 672, 882, 943, 1525, 1651, 2097
BstDEI	CTNAG	4 cut(s)	792, 804, 1884, 2199
BstDSI	CCRYGG	4 cut(s)	265, 776, 1401, 1906
BstEII	GGTNACC	2 cut(s)	1234, 1315
BstF5I	GGATG	8 cut(s)	166, 436, 494, 711, 790, 1742, 1891, 2033
BstFNI	CGCG	2 cut(s)	521, 1247
BstH2I	RGCGCY	2 cut(s)	576, 921
BstHHI	GCGC	4 cut(s)	88, 521, 575, 920
BstMAI	GTCTC	1 cut(s)	136
BstMWI	GCNNNNNNNGC	8 cut(s)	470, 518, 636, 1049, 1358, 1529, 1619, 1646
BstNI	CCWGG	6 cut(s)	52, 449, 1095, 1293, 1567, 2061
BstNSI	RCATGY	1 cut(s)	2099
BstPI	GGTNACC	2 cut(s)	1234, 1315
BstSCI	CCNGG	9 cut(s)	50, 447, 664, 820, 1093, 1291, 1565, 1622, 2059
BstSFI	CTRYAG	1 cut(s)	280
BstSLI	GKGCMC	1 cut(s)	812
BstUI	CGCG	2 cut(s)	521, 1247
BstV1I	GCAGC	7 cut(s)	582, 639, 775, 925, 1347, 1474, 1633
BstX2I	RGATCY	5 cut(s)	236, 259, 824, 1054, 1569
BstYI	RGATCY	5 cut(s)	236, 259, 824, 1054, 1569
BsuRI	GGCC	8 cut(s)	35, 49, 55, 192, 670, 1296, 1406, 1627
BtgI	CCRYGG	4 cut(s)	265, 776, 1401, 1906
BtgZI	GCGATG	2 cut(s)	46, 1389
BtsCI	GGATG	8 cut(s)	166, 436, 494, 711, 790, 1742, 1891, 2033
BtsIMutI	CAGTG	8 cut(s)	7, 213, 654, 812, 862, 1236, 1549, 2115
BveI	ACCTGC	1 cut(s)	2179
Cac8I	GCNNGC	8 cut(s)	84, 475, 672, 882, 943, 1525, 1651, 2097
CaiI	CAGNNNCTG	1 cut(s)	1490
CciI	TCATGA	2 cut(s)	1185, 1281
CfoI	GCGC	4 cut(s)	88, 521, 575, 920
Cfr10I	RCCGGY	4 cut(s)	535, 934, 941, 1046
Cfr13I	GGNCC	6 cut(s)	34, 48, 668, 788, 1625, 1866
CseI	GACGC	2 cut(s)	1236, 1253
Csp6I	GTAC	2 cut(s)	1276, 1791
CspAI	ACCGGT	1 cut(s)	1046
CviAII	CATG	9 cut(s)	128, 914, 999, 1186, 1282, 1348, 1576, 1907, 2096
CviQI	GTAC	2 cut(s)	1276, 1791
DdeI	CTNAG	4 cut(s)	792, 804, 1884, 2199
DinI	GGCGCC	1 cut(s)	919
DraIII	CACNNNGTG	1 cut(s)	757
DrdI	GACNNNNNNGTC	1 cut(s)	1313
DseDI	GACNNNNNNGTC	1 cut(s)	1313
EaeI	YGGCCR	2 cut(s)	190, 1404
Eam1104I	CTCTTC	2 cut(s)	629, 2142
EarI	CTCTTC	2 cut(s)	629, 2142
Eco130I	CCWWGG	4 cut(s)	721, 1116, 1861, 1906
Eco32I	GATATC	1 cut(s)	315
Eco47I	GGWCC	2 cut(s)	788, 1866
Eco47III	AGCGCT	1 cut(s)	574
Eco57I	CTGAAG	1 cut(s)	488
Eco72I	CACGTG	1 cut(s)	902
Eco88I	CYCGRG	1 cut(s)	421
Eco91I	GGTNACC	2 cut(s)	1234, 1315
EcoO65I	GGTNACC	2 cut(s)	1234, 1315
EcoRII	CCWGG	6 cut(s)	50, 447, 1093, 1291, 1565, 2059
EcoRV	GATATC	1 cut(s)	315
EcoT14I	CCWWGG	4 cut(s)	721, 1116, 1861, 1906
EcoT22I	ATGCAT	2 cut(s)	1902, 2079
EgeI	GGCGCC	1 cut(s)	919
EheI	GGCGCC	1 cut(s)	919
ErhI	CCWWGG	4 cut(s)	721, 1116, 1861, 1906
FaeI	CATG	9 cut(s)	131, 917, 1002, 1189, 1285, 1351, 1579, 1910, 2099
FalI	AAGNNNNNCTT	2 cut(s)	626, 658
FaqI	GGGAC	3 cut(s)	414, 1112, 1879
FatI	CATG	9 cut(s)	127, 913, 998, 1185, 1281, 1347, 1575, 1906, 2095
FauI	CCCGC	1 cut(s)	1758
FauNDI	CATATG	2 cut(s)	970, 2178
FblI	GTMKAC	1 cut(s)	92
FokI	GGATG	8 cut(s)	153, 423, 481, 698, 797, 1729, 1878, 2040
FspBI	CTAG	1 cut(s)	1650
GlaI	GCGC	4 cut(s)	87, 520, 574, 919
GsuI	CTGGAG	2 cut(s)	1275, 2082
HaeII	RGCGCY	2 cut(s)	576, 921
HaeIII	GGCC	8 cut(s)	35, 49, 55, 192, 670, 1296, 1406, 1627
HgaI	GACGC	2 cut(s)	1236, 1253
HhaI	GCGC	4 cut(s)	88, 521, 575, 920
Hin1I	GRCGYC	1 cut(s)	918
Hin1II	CATG	9 cut(s)	131, 917, 1002, 1189, 1285, 1351, 1579, 1910, 2099
Hin6I	GCGC	4 cut(s)	86, 519, 573, 918
HinP1I	GCGC	4 cut(s)	86, 519, 573, 918
HincII	GTYRAC	4 cut(s)	93, 222, 709, 1144
HindII	GTYRAC	4 cut(s)	93, 222, 709, 1144
HindIII	AAGCTT	2 cut(s)	1698, 2156
HinfI	GANTC	6 cut(s)	145, 320, 488, 814, 2043, 2150
Hpy166II	GTNNAC	6 cut(s)	93, 222, 685, 709, 1144, 1786
Hpy188I	TCNGA	9 cut(s)	319, 325, 395, 468, 784, 1069, 1551, 1803, 2042
Hpy188III	TCNNGA	4 cut(s)	1186, 1282, 1561, 1883
Hpy8I	GTNNAC	6 cut(s)	93, 222, 685, 709, 1144, 1786
Hpy99I	CGWCG	4 cut(s)	110, 158, 365, 385
HpyAV	CCTTC	7 cut(s)	453, 463, 857, 1084, 1472, 1816, 1835
HpyCH4III	ACNGT	9 cut(s)	217, 649, 910, 1133, 1200, 1231, 1582, 1790, 2119
HpyCH4IV	ACGT	3 cut(s)	705, 901, 1308
HpyF10VI	GCNNNNNNNGC	8 cut(s)	470, 518, 636, 1049, 1358, 1529, 1619, 1646
HpyF3I	CTNAG	4 cut(s)	792, 804, 1884, 2199
HpySE526I	ACGT	3 cut(s)	705, 901, 1308
Hsp92I	GRCGYC	1 cut(s)	918
Hsp92II	CATG	9 cut(s)	131, 917, 1002, 1189, 1285, 1351, 1579, 1910, 2099
HspAI	GCGC	4 cut(s)	86, 519, 573, 918
KasI	GGCGCC	1 cut(s)	917
KroI	GCCGGC	1 cut(s)	941
KroNI	GCCGGC	1 cut(s)	943
LguI	GCTCTTC	1 cut(s)	629
LmnI	GCTCC	3 cut(s)	1118, 1885, 2195
Lsp1109I	GCAGC	7 cut(s)	582, 639, 775, 925, 1347, 1474, 1633
LweI	GCATC	6 cut(s)	175, 280, 648, 1060, 1130, 1909
MaeI	CTAG	1 cut(s)	1650
MaeII	ACGT	3 cut(s)	705, 901, 1308
MaeIII	GTNAC	6 cut(s)	581, 736, 1234, 1315, 1452, 1937
MboII	GAAGA	6 cut(s)	646, 872, 1205, 1403, 1849, 2159
MfeI	CAATTG	1 cut(s)	1108
MflI	RGATCY	5 cut(s)	236, 259, 824, 1054, 1569
MhlI	GDGCHC	1 cut(s)	812
MlsI	TGGCCA	1 cut(s)	192
MluCI	AATT	8 cut(s)	530, 610, 984, 1026, 1108, 1765, 1945, 1978
MluI	ACGCGT	1 cut(s)	1245
MluNI	TGGCCA	1 cut(s)	192
Mly113I	GGCGCC	1 cut(s)	918
MlyI	GAGTC	3 cut(s)	139, 329, 2159
MmeI	TCCRAC	5 cut(s)	762, 1574, 1770, 1826, 1909
Mox20I	TGGCCA	1 cut(s)	192
Mph1103I	ATGCAT	2 cut(s)	1902, 2079
MroNI	GCCGGC	1 cut(s)	941
MroXI	GAANNNNTTC	1 cut(s)	1429
MscI	TGGCCA	1 cut(s)	192
MseI	TTAA	5 cut(s)	644, 1005, 1029, 1655, 1950
MslI	CAYNNNNRTG	3 cut(s)	126, 874, 1905
Msp20I	TGGCCA	1 cut(s)	192
MspA1I	CMGCKG	1 cut(s)	1487
MspR9I	CCNGG	9 cut(s)	52, 449, 666, 822, 1095, 1293, 1567, 1624, 2061
MunI	CAATTG	1 cut(s)	1108
MvaI	CCWGG	6 cut(s)	52, 449, 1095, 1293, 1567, 2061
MvnI	CGCG	2 cut(s)	521, 1247
MwoI	GCNNNNNNNGC	8 cut(s)	470, 518, 636, 1049, 1358, 1529, 1619, 1646
NaeI	GCCGGC	1 cut(s)	943
NarI	GGCGCC	1 cut(s)	918
NciI	CCSGG	3 cut(s)	666, 822, 1624
NcoI	CCATGG	1 cut(s)	1906
NdeI	CATATG	2 cut(s)	970, 2178
NgoMIV	GCCGGC	1 cut(s)	941
NheI	GCTAGC	1 cut(s)	1649
NlaIII	CATG	9 cut(s)	131, 917, 1002, 1189, 1285, 1351, 1579, 1910, 2099
NlaIV	GGNNCC	3 cut(s)	669, 919, 1867
NmeAIII	GCCGAG	2 cut(s)	533, 792
NmuCI	GTSAC	3 cut(s)	736, 1234, 1315
NsiI	ATGCAT	2 cut(s)	1902, 2079
NspI	RCATGY	1 cut(s)	2099
PaeI	GCATGC	1 cut(s)	2099
PagI	TCATGA	2 cut(s)	1185, 1281
PaqCI	CACCTGC	1 cut(s)	2179
PciSI	GCTCTTC	1 cut(s)	629
PcsI	WCGNNNNNNNCGW	1 cut(s)	2150
PdiI	GCCGGC	1 cut(s)	943
PdmI	GAANNNNTTC	1 cut(s)	1429
PfeI	GAWTC	3 cut(s)	488, 814, 2043
PflMI	CCANNNNNTGG	2 cut(s)	747, 1303
PfoI	TCCNGGA	1 cut(s)	2059
PinAI	ACCGGT	1 cut(s)	1046
PleI	GAGTC	3 cut(s)	139, 328, 2158
PluTI	GGCGCC	1 cut(s)	921
PmaCI	CACGTG	1 cut(s)	902
PmlI	CACGTG	1 cut(s)	902
PpsI	GAGTC	3 cut(s)	139, 328, 2158
Ppu21I	YACGTR	1 cut(s)	902
Psp6I	CCWGG	6 cut(s)	50, 447, 1093, 1291, 1565, 2059
PspCI	CACGTG	1 cut(s)	902
PspEI	GGTNACC	2 cut(s)	1234, 1315
PspGI	CCWGG	6 cut(s)	50, 447, 1093, 1291, 1565, 2059
PspN4I	GGNNCC	3 cut(s)	669, 919, 1867
PspPI	GGNCC	6 cut(s)	34, 48, 668, 788, 1625, 1866
PstI	CTGCAG	1 cut(s)	284
PstNI	CAGNNNCTG	1 cut(s)	1490
PsuI	RGATCY	5 cut(s)	236, 259, 824, 1054, 1569
PvuII	CAGCTG	1 cut(s)	1487
RsaI	GTAC	2 cut(s)	1277, 1792
RsaNI	GTAC	2 cut(s)	1276, 1791
RseI	CAYNNNNRTG	3 cut(s)	126, 874, 1905
SalI	GTCGAC	1 cut(s)	91
SapI	GCTCTTC	1 cut(s)	629
SaqAI	TTAA	5 cut(s)	644, 1005, 1029, 1655, 1950
Sau96I	GGNCC	6 cut(s)	34, 48, 668, 788, 1625, 1866
SchI	GAGTC	3 cut(s)	139, 329, 2159
ScrFI	CCNGG	9 cut(s)	52, 449, 666, 822, 1095, 1293, 1567, 1624, 2061
SduI	GDGCHC	1 cut(s)	812
SfaNI	GCATC	6 cut(s)	175, 280, 648, 1060, 1130, 1909
SfcI	CTRYAG	1 cut(s)	280
SfoI	GGCGCC	1 cut(s)	919
SinI	GGWCC	2 cut(s)	788, 1866
SmiMI	CAYNNNNRTG	3 cut(s)	126, 874, 1905
SphI	GCATGC	1 cut(s)	2099
Sse9I	AATT	8 cut(s)	530, 610, 984, 1026, 1108, 1765, 1945, 1978
SsiI	CCGC	9 cut(s)	135, 164, 177, 342, 521, 524, 715, 1503, 1751
SspDI	GGCGCC	1 cut(s)	917
SspMI	CTAG	1 cut(s)	1650
StyD4I	CCNGG	9 cut(s)	50, 447, 664, 820, 1093, 1291, 1565, 1622, 2059
StyI	CCWWGG	4 cut(s)	721, 1116, 1861, 1906
TaaI	ACNGT	9 cut(s)	217, 649, 910, 1133, 1200, 1231, 1582, 1790, 2119
TaiI	ACGT	3 cut(s)	708, 904, 1311
TaqI	TCGA	5 cut(s)	92, 290, 500, 1420, 2153
TasI	AATT	8 cut(s)	530, 610, 984, 1026, 1108, 1765, 1945, 1978
TauI	GCSGC	4 cut(s)	166, 179, 524, 527
TfiI	GAWTC	3 cut(s)	488, 814, 2043
Tru1I	TTAA	5 cut(s)	644, 1005, 1029, 1655, 1950
Tru9I	TTAA	5 cut(s)	644, 1005, 1029, 1655, 1950
TscAI	CASTG	8 cut(s)	14, 220, 654, 812, 862, 1236, 1549, 2122
TseFI	GTSAC	3 cut(s)	736, 1234, 1315
TseI	GCWGC	7 cut(s)	570, 627, 763, 938, 1335, 1487, 1646
Tsp45I	GTSAC	3 cut(s)	736, 1234, 1315
TspDTI	ATGAA	6 cut(s)	734, 902, 987, 1202, 1608, 2113
TspGWI	ACGGA	7 cut(s)	369, 765, 768, 1440, 1612, 2040, 2159
TspRI	CASTG	8 cut(s)	14, 220, 654, 812, 862, 1236, 1549, 2122
Van91I	CCANNNNNTGG	2 cut(s)	747, 1303
VpaK11BI	GGWCC	2 cut(s)	788, 1866
XapI	RAATTY	2 cut(s)	610, 1945
XceI	RCATGY	1 cut(s)	2099
XcmI	CCANNNNNNNNNTGG	3 cut(s)	728, 2025, 2107
XmiI	GTMKAC	1 cut(s)	92
XmnI	GAANNNNTTC	1 cut(s)	1429
XspI	CTAG	1 cut(s)	1650
Zsp2I	ATGCAT	2 cut(s)	1902, 2079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.