Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004220

Physical Location & Seq

Genomic Coordinates Forward (+)

19654245 .. 19661264

Gene Structure 7020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00180140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGAAAGGATCAGTCAGGTACCTCATTCGCAAGGACTGCTAGTAGTACAGTGTATAAATTTGAGGTTGTTATGGGTTGAGATTCAAGAATCTCGTCGACCTTCCAGATTTGTCGACTTGTCACCTCATGGGAGAATCCGAGCTCAAGAGCTGGCTCAAATCACAGAAAAAAAGAAAAGAAAGAAAGAAACAGTAATATCGTTCCTTGTGTACCTGATAAGAATTCTGGGAGGTATGGCAGTGAAACAGTCGATGAGTTTAGGGTTGTTATGGTTTTTATTTTTGCACGGATGTCTGCTTCTGTGCATTAGGGCTCAAACGGTTGAGATTCGCTTTGTGGTGGAAGAGGTGAATATTACCAGAATGTGCCTGGAGCAGCCCTTGCTTACTGTAAATGGAATGTTTCCTGGCCCAAATATTACAGTTACTAGAAATGATACCGTATATGTTGATGTGCTAAACAACGGACCGTATCCTATCACCATTCACTGCGGAAAAAATTATCATCTCCGCATAATCAATGCGGTGATGGAGGAGGAAATGTTCTTTGCAATTTCCGGTCACAAGTTCACGGTTGTTGGACTTGACGGTGCATATCTGACTCCGATACCCACAAACTACATCATGATAACTCCTGGCCAAACGATGGACATATTGCTCACTACGAATCAGACTCCGCGTAGTTACTACATGGGTGGAAAGGCTTTTGTCGACTCCAAATTTGGTACACCCATGAACTCCACAACAAGAGCAATTCTTCAATACCGCAATTATAAAGGCACTGAAGATCCAGTTGATCTTGGAGACCTTCTTCCAGCTGATTCAAAAAACGCGAGTTATGCAAAGGCCTTCACCGAAAGAGTTCGAACCAGCGGATTGACAGGCAACGATGATTACCCGATTACGGTCCCCAGTGATTCTGAAATCAATAAGAACTTCACCATCACAATTTCTGTGAATACGCTTCCTTGTCCATATCCTAGTAACAATTGCACGGCGCCGCAAAACTATAATGCAACTTGGACAGGGATGCACGCTGCATCCTTAAACAACCAACGTTTCGTCACCCAAAATGTCAACATACTGCAGGCATATCGCTGCAACATAGAAGATGTCTACACAGAGGATTTCCCAGACAGACCAGAGGAGTTCGACTACACTGGGGCGACCGGAAATAATGAAACAGTTCCAACTGTAGGTACGAAGGTGATGACTGTTGACTATGGAGAAGCAGTTGAAATAGTTTTCCAAGGAACCAATGTCGGAAACGCAGAGAACCATCCCATGCATATTCATGGTTATAACTTCTATCTGGTTGGAAGTGATGATGGCAATTTCAACGACTCTTCACGTCAAACTTTTAATTTGACATCCCCAGCTGAAGCCAATACCTTCGGAGTCCCTAAGAATGGATGGCTCGCTGTTAGATTCTGGGCTAACAATCCTGGAGTGTGGTTTCTACATTGCCATTTGGAAAGGCATGCTACCTGGGGTATGGCCGGAGTACTCATCGTGAAGAATACAACTACTGACGTAAAACAAAGTCTTTTGGATCCCCCTGCAGGCTACCCCCTTGTCCCTAATCCTGATTCGCAATTAACTCCTAAATTATTTTTAATTAGGAGCTTAACATCAGGATCTTTCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

549

Amino Acids

61.46

Weight (kDa)

6.37

Isoelectric Point (pI)

43.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	114 - 164	2.4e-09	Multicopper oxidase
Cu-oxidase	PF00394	154 - 257	2.1e-24	Multicopper oxidase
Cu-oxidase_2	PF07731	378 - 507	2.4e-39	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004220)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g12610 FvH4_2g12610 FvH4_2g21650
malus_domestica	MD00G1014800.v1.1 MD00G1190700.v1.1 MD02G1264400.v1.1 MD10G1042600.v1.1
prunus_persica	Prupe.8G047100_v2.0.a1 Prupe.8G047200_v2.0.a1 Prupe.8G047300_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047500_v2.0.a1 Prupe.8G047900_v2.0.a1 Prupe.8G048100_v2.0.a1
pyrus_communis	pycom05g02900 pycom10g02970
rosa_chinensis	RchiOBHm_Chr6g0273201 RchiOBHm_Chr6g0288321
rosa_laevigata	RLG00000012414 RLG00000013632 RLG00000013639
rosa_multiflora	Rmu_sc0000239.1_g000090
rosa_roxburghii	Rroxscaffold_7G00180140 Rroxscaffold_7G00195550
rosa_rugosa	Rorug06G0073100 Rorug06G0195600
rosa_samantha	Rh6BG192200 Rh6BG312600 Rh6CG191600 Rh6CG320400 Rh6DG183000 Rh6DG305600
rosa_wichuraiana	Rw6G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	774, 1302
Acc65I	GGTACC	1 cut(s)	19
AccB1I	GGYRCC	2 cut(s)	19, 997
AccB7I	CCANNNNNTGG	1 cut(s)	646
AccI	GTMKAC	4 cut(s)	97, 114, 711, 1116
AccII	CGCG	2 cut(s)	679, 833
AciI	CCGC	7 cut(s)	492, 511, 524, 677, 766, 873, 1001
AclI	AACGTT	1 cut(s)	1057
AclWI	GGATC	5 cut(s)	17, 782, 1547, 1560, 1645
AcoI	YGGCCR	2 cut(s)	637, 1497
AcsI	RAATTY	3 cut(s)	58, 222, 719
AcuI	CTGAAG	2 cut(s)	804, 1401
AcyI	GRCGYC	1 cut(s)	998
AfaI	GTAC	6 cut(s)	21, 48, 212, 727, 1201, 1506
AfiI	CCNNNNNNNGG	5 cut(s)	646, 904, 1196, 1409, 1562
AgsI	TTSAA	6 cut(s)	86, 761, 825, 1238, 1339, 1645
AjiI	CACGTC	1 cut(s)	1352
AjnI	CCWGG	5 cut(s)	369, 406, 634, 1444, 1487
AloI	GAACNNNNNNTCC	2 cut(s)	527, 559
AluBI	AGCT	5 cut(s)	143, 151, 818, 1379, 1626
AluI	AGCT	5 cut(s)	143, 151, 818, 1379, 1626
Alw21I	GWGCWC	1 cut(s)	145
Alw26I	GTCTC	1 cut(s)	798
AlwI	GGATC	5 cut(s)	17, 782, 1547, 1560, 1645
AoxI	GGCC	4 cut(s)	409, 637, 846, 1497
ApeKI	GCWGC	3 cut(s)	376, 1037, 1098
ApoI	RAATTY	3 cut(s)	58, 222, 719
ArsI	GACNNNNNNTTYG	2 cut(s)	704, 736
Asp700I	GAANNNNTTC	2 cut(s)	861, 1185
Asp718I	GGTACC	1 cut(s)	19
AspLEI	GCGC	1 cut(s)	1000
AspS9I	GGNCC	3 cut(s)	410, 467, 907
AsuHPI	GGTGA	8 cut(s)	114, 361, 472, 538, 844, 931, 1057, 1219
AsuII	TTCGAA	1 cut(s)	865
AvaII	GGWCC	2 cut(s)	467, 907
BaeI	ACNNNNGTAYC	2 cut(s)	1191, 1224
BalI	TGGCCA	1 cut(s)	639
BamHI	GGATCC	1 cut(s)	1552
BanI	GGYRCC	2 cut(s)	19, 997
BanII	GRGCYC	2 cut(s)	145, 316
Bbv12I	GWGCWC	1 cut(s)	145
BbvI	GCAGC	3 cut(s)	388, 1024, 1085
BccI	CCATC	6 cut(s)	523, 640, 950, 1287, 1322, 1407
BceAI	ACGGC	1 cut(s)	1011
BcgI	CGANNNNNNTGC	2 cut(s)	1076, 1110
BciT130I	CCWGG	5 cut(s)	371, 408, 636, 1446, 1489
BciVI	GTATCC	1 cut(s)	483
BcoDI	GTCTC	1 cut(s)	798
BfaI	CTAG	3 cut(s)	41, 429, 981
BfmI	CTRYAG	3 cut(s)	1085, 1194, 1560
BfoI	RGCGCY	1 cut(s)	1001
BfuI	GTATCC	1 cut(s)	483
BisI	GCNGC	4 cut(s)	377, 1001, 1038, 1099
BlsI	GCNGC	4 cut(s)	378, 1002, 1039, 1100
BmcAI	AGTACT	1 cut(s)	1506
Bme1390I	CCNGG	5 cut(s)	371, 408, 636, 1446, 1489
Bme18I	GGWCC	2 cut(s)	467, 907
BmgBI	CACGTC	1 cut(s)	1352
BmgT120I	GGNCC	3 cut(s)	410, 467, 907
BmiI	GGNNCC	5 cut(s)	21, 909, 999, 1255, 1554
BmrFI	CCNGG	5 cut(s)	371, 408, 636, 1446, 1489
BmrI	ACTGGG	2 cut(s)	906, 1170
BmsI	GCATC	2 cut(s)	1020, 1049
BmuI	ACTGGG	2 cut(s)	906, 1170
BpmI	CTGGAG	2 cut(s)	392, 1467
Bpu14I	TTCGAA	1 cut(s)	865
BpuEI	CTTGAG	1 cut(s)	129
BsaHI	GRCGYC	1 cut(s)	998
BsaI	GGTCTC	1 cut(s)	798
BsaJI	CCNNGG	2 cut(s)	1249, 1488
BsaWI	WCCGGW	2 cut(s)	557, 1169
BsaXI	ACNNNNNCTCC	4 cut(s)	527, 557, 1218, 1248
Bsc4I	CCNNNNNNNGG	5 cut(s)	646, 904, 1196, 1409, 1562
Bse1I	ACTGG	3 cut(s)	791, 912, 1165
Bse3DI	GCAATG	1 cut(s)	1462
BseBI	CCWGG	5 cut(s)	371, 408, 636, 1446, 1489
BseDI	CCNNGG	2 cut(s)	1249, 1488
BseGI	GGATG	6 cut(s)	296, 1035, 1040, 1279, 1370, 1418
BseLI	CCNNNNNNNGG	5 cut(s)	646, 904, 1196, 1409, 1562
BseMI	GCAATG	1 cut(s)	1462
BseNI	ACTGG	3 cut(s)	791, 912, 1165
BseRI	GAGGAG	2 cut(s)	548, 1160
BseXI	GCAGC	3 cut(s)	388, 1024, 1085
BseYI	CCCAGC	1 cut(s)	1375
Bsh1236I	CGCG	2 cut(s)	679, 833
Bsh1285I	CGRYCG	1 cut(s)	1170
BshFI	GGCC	4 cut(s)	411, 639, 848, 1499
BshNI	GGYRCC	2 cut(s)	19, 997
BsiEI	CGRYCG	1 cut(s)	1170
BsiHKAI	GWGCWC	1 cut(s)	145
BsiSI	CCGG	3 cut(s)	558, 1170, 1500
BslFI	GGGAC	3 cut(s)	893, 1385, 1562
BslI	CCNNNNNNNGG	5 cut(s)	646, 904, 1196, 1409, 1562
BsmAI	GTCTC	1 cut(s)	798
BsmFI	GGGAC	3 cut(s)	893, 1385, 1562
BsnI	GGCC	4 cut(s)	411, 639, 848, 1499
Bso31I	GGTCTC	1 cut(s)	798
Bsp119I	TTCGAA	1 cut(s)	865
Bsp1286I	GDGCHC	2 cut(s)	145, 316
Bsp143I	GATC	5 cut(s)	9, 787, 796, 1552, 1637
BspACI	CCGC	7 cut(s)	492, 511, 524, 677, 766, 873, 1001
BspANI	GGCC	4 cut(s)	411, 639, 848, 1499
BspFNI	CGCG	2 cut(s)	679, 833
BspHI	TCATGA	1 cut(s)	624
BspLI	GGNNCC	5 cut(s)	21, 909, 999, 1255, 1554
BspMAI	CTGCAG	2 cut(s)	1089, 1564
BspPI	GGATC	5 cut(s)	17, 782, 1547, 1560, 1645
BspT104I	TTCGAA	1 cut(s)	865
BspT107I	GGYRCC	2 cut(s)	19, 997
BspTNI	GGTCTC	1 cut(s)	798
BsrDI	GCAATG	1 cut(s)	1462
BsrI	ACTGG	3 cut(s)	791, 912, 1165
BssECI	CCNNGG	2 cut(s)	1249, 1488
BssMI	GATC	5 cut(s)	9, 787, 796, 1552, 1637
BssNI	GRCGYC	1 cut(s)	998
BssT1I	CCWWGG	1 cut(s)	1249
Bst2UI	CCWGG	5 cut(s)	371, 408, 636, 1446, 1489
Bst6I	CTCTTC	2 cut(s)	339, 1351
BstACI	GRCGYC	1 cut(s)	998
BstAPI	GCANNNNNTGC	2 cut(s)	37, 382
BstBI	TTCGAA	1 cut(s)	865
BstC8I	GCNNGC	6 cut(s)	153, 1035, 1089, 1419, 1482, 1564
BstDEI	CTNAG	1 cut(s)	1404
BstF5I	GGATG	6 cut(s)	296, 1035, 1040, 1279, 1370, 1418
BstFNI	CGCG	2 cut(s)	679, 833
BstH2I	RGCGCY	1 cut(s)	1001
BstHHI	GCGC	1 cut(s)	1000
BstKTI	GATC	5 cut(s)	12, 790, 799, 1555, 1640
BstMAI	GTCTC	1 cut(s)	798
BstMBI	GATC	5 cut(s)	9, 787, 796, 1552, 1637
BstMCI	CGRYCG	1 cut(s)	1170
BstMWI	GCNNNNNNNGC	3 cut(s)	37, 382, 839
BstNI	CCWGG	5 cut(s)	371, 408, 636, 1446, 1489
BstNSI	RCATGY	1 cut(s)	1484
BstSCI	CCNGG	5 cut(s)	369, 406, 634, 1444, 1487
BstSFI	CTRYAG	3 cut(s)	1085, 1194, 1560
BstUI	CGCG	2 cut(s)	679, 833
BstV1I	GCAGC	3 cut(s)	388, 1024, 1085
BstX2I	RGATCY	3 cut(s)	787, 1552, 1637
BstYI	RGATCY	3 cut(s)	787, 1552, 1637
BsuI	GTATCC	1 cut(s)	483
BsuRI	GGCC	4 cut(s)	411, 639, 848, 1499
BtrI	CACGTC	1 cut(s)	1352
BtsCI	GGATG	6 cut(s)	296, 1035, 1040, 1279, 1370, 1418
BtsI	GCAGTG	2 cut(s)	246, 487
BtsIMutI	CAGTG	6 cut(s)	56, 246, 487, 780, 919, 1158
Cac8I	GCNNGC	6 cut(s)	153, 1035, 1089, 1419, 1482, 1564
CciI	TCATGA	1 cut(s)	624
CfoI	GCGC	1 cut(s)	1000
Cfr13I	GGNCC	3 cut(s)	410, 467, 907
CpoI	CGGWCCG	1 cut(s)	467
Csp6I	GTAC	6 cut(s)	20, 47, 211, 726, 1200, 1505
CspI	CGGWCCG	1 cut(s)	467
CviAII	CATG	7 cut(s)	128, 625, 691, 733, 1285, 1295, 1481
CviQI	GTAC	6 cut(s)	20, 47, 211, 726, 1200, 1505
DdeI	CTNAG	1 cut(s)	1404
DinI	GGCGCC	1 cut(s)	999
DpnI	GATC	5 cut(s)	11, 789, 798, 1554, 1639
DpnII	GATC	5 cut(s)	9, 787, 796, 1552, 1637
EaeI	YGGCCR	2 cut(s)	637, 1497
Eam1104I	CTCTTC	2 cut(s)	339, 1351
EarI	CTCTTC	2 cut(s)	339, 1351
Ecl136II	GAGCTC	1 cut(s)	143
Eco130I	CCWWGG	1 cut(s)	1249
Eco147I	AGGCCT	1 cut(s)	848
Eco24I	GRGCYC	2 cut(s)	145, 316
Eco31I	GGTCTC	1 cut(s)	798
Eco47I	GGWCC	2 cut(s)	467, 907
Eco53kI	GAGCTC	1 cut(s)	143
Eco57I	CTGAAG	2 cut(s)	804, 1401
EcoICRI	GAGCTC	1 cut(s)	143
EcoRI	GAATTC	1 cut(s)	222
EcoRII	CCWGG	5 cut(s)	369, 406, 634, 1444, 1487
EcoT14I	CCWWGG	1 cut(s)	1249
EcoT22I	ATGCAT	1 cut(s)	1290
EcoT38I	GRGCYC	2 cut(s)	145, 316
EgeI	GGCGCC	1 cut(s)	999
EheI	GGCGCC	1 cut(s)	999
ErhI	CCWWGG	1 cut(s)	1249
FaeI	CATG	7 cut(s)	131, 628, 694, 736, 1288, 1298, 1484
FaqI	GGGAC	3 cut(s)	893, 1385, 1562
FatI	CATG	7 cut(s)	127, 624, 690, 732, 1284, 1294, 1480
FblI	GTMKAC	4 cut(s)	97, 114, 711, 1116
Fnu4HI	GCNGC	4 cut(s)	377, 1001, 1038, 1099
FokI	GGATG	6 cut(s)	303, 1027, 1042, 1266, 1357, 1425
FriOI	GRGCYC	2 cut(s)	145, 316
Fsp4HI	GCNGC	4 cut(s)	377, 1001, 1038, 1099
FspBI	CTAG	3 cut(s)	41, 429, 981
GlaI	GCGC	1 cut(s)	999
GluI	GCNGC	4 cut(s)	377, 1001, 1038, 1099
GsaI	CCCAGC	1 cut(s)	1379
GsuI	CTGGAG	2 cut(s)	392, 1467
HaeII	RGCGCY	1 cut(s)	1001
HaeIII	GGCC	4 cut(s)	411, 639, 848, 1499
HapII	CCGG	3 cut(s)	558, 1170, 1500
HhaI	GCGC	1 cut(s)	1000
Hin1I	GRCGYC	1 cut(s)	998
Hin1II	CATG	7 cut(s)	131, 628, 694, 736, 1288, 1298, 1484
Hin6I	GCGC	1 cut(s)	998
HinP1I	GCGC	1 cut(s)	998
HincII	GTYRAC	5 cut(s)	98, 115, 712, 1078, 1219
HindII	GTYRAC	5 cut(s)	98, 115, 712, 1078, 1219
HpaII	CCGG	3 cut(s)	558, 1170, 1500
HphI	GGTGA	8 cut(s)	114, 361, 472, 538, 844, 931, 1057, 1219
Hpy166II	GTNNAC	9 cut(s)	98, 115, 211, 570, 712, 728, 1078, 1117, 1219
Hpy188I	TCNGA	7 cut(s)	140, 600, 606, 672, 922, 1265, 1397
Hpy188III	TCNNGA	7 cut(s)	86, 105, 146, 625, 1513, 1586, 1635
Hpy8I	GTNNAC	9 cut(s)	98, 115, 211, 570, 712, 728, 1078, 1117, 1219
Hpy99I	CGWCG	1 cut(s)	99
HpyAV	CCTTC	5 cut(s)	111, 818, 859, 1198, 1402
HpyCH4IV	ACGT	3 cut(s)	1057, 1351, 1533
HpyF10VI	GCNNNNNNNGC	3 cut(s)	37, 382, 839
HpyF3I	CTNAG	1 cut(s)	1404
HpySE526I	ACGT	3 cut(s)	1057, 1351, 1533
Hsp92I	GRCGYC	1 cut(s)	998
Hsp92II	CATG	7 cut(s)	131, 628, 694, 736, 1288, 1298, 1484
HspAI	GCGC	1 cut(s)	998
KasI	GGCGCC	1 cut(s)	997
KpnI	GGTACC	1 cut(s)	23
Kzo9I	GATC	5 cut(s)	9, 787, 796, 1552, 1637
LmnI	GCTCC	2 cut(s)	373, 1623
Lsp1109I	GCAGC	3 cut(s)	388, 1024, 1085
LweI	GCATC	2 cut(s)	1020, 1049
MaeI	CTAG	3 cut(s)	41, 429, 981
MaeII	ACGT	3 cut(s)	1057, 1351, 1533
MaeIII	GTNAC	6 cut(s)	120, 424, 560, 683, 983, 1063
MalI	GATC	5 cut(s)	11, 789, 798, 1554, 1639
MboI	GATC	5 cut(s)	9, 787, 796, 1552, 1637
MboII	GAAGA	7 cut(s)	356, 749, 797, 803, 1121, 1338, 1528
MfeI	CAATTG	1 cut(s)	988
MflI	RGATCY	3 cut(s)	787, 1552, 1637
MhlI	GDGCHC	2 cut(s)	145, 316
MlsI	TGGCCA	1 cut(s)	639
MluNI	TGGCCA	1 cut(s)	639
Mly113I	GGCGCC	1 cut(s)	998
MlyI	GAGTC	5 cut(s)	595, 667, 707, 1337, 1407
MmeI	TCCRAC	4 cut(s)	559, 1214, 1243, 1297
MnlI	CCTC	9 cut(s)	33, 57, 135, 224, 340, 526, 529, 1117, 1138
Mox20I	TGGCCA	1 cut(s)	639
Mph1103I	ATGCAT	1 cut(s)	1290
MroXI	GAANNNNTTC	2 cut(s)	861, 1185
MscI	TGGCCA	1 cut(s)	639
MseI	TTAA	5 cut(s)	1046, 1362, 1598, 1616, 1628
MslI	CAYNNNNRTG	1 cut(s)	1293
Msp20I	TGGCCA	1 cut(s)	639
MspA1I	CMGCKG	3 cut(s)	818, 873, 1379
MspI	CCGG	3 cut(s)	558, 1170, 1500
MspR9I	CCNGG	5 cut(s)	371, 408, 636, 1446, 1489
MunI	CAATTG	1 cut(s)	988
MvaI	CCWGG	5 cut(s)	371, 408, 636, 1446, 1489
MvnI	CGCG	2 cut(s)	679, 833
MwoI	GCNNNNNNNGC	3 cut(s)	37, 382, 839
NarI	GGCGCC	1 cut(s)	998
NdeII	GATC	5 cut(s)	9, 787, 796, 1552, 1637
NlaIII	CATG	7 cut(s)	131, 628, 694, 736, 1288, 1298, 1484
NlaIV	GGNNCC	5 cut(s)	21, 909, 999, 1255, 1554
NmuCI	GTSAC	3 cut(s)	120, 560, 1063
NsiI	ATGCAT	1 cut(s)	1290
NspI	RCATGY	1 cut(s)	1484
NspV	TTCGAA	1 cut(s)	865
PaeI	GCATGC	1 cut(s)	1484
PagI	TCATGA	1 cut(s)	624
PceI	AGGCCT	1 cut(s)	848
PdmI	GAANNNNTTC	2 cut(s)	861, 1185
PfeI	GAWTC	9 cut(s)	82, 89, 135, 328, 667, 821, 917, 1428, 1589
PflMI	CCANNNNNTGG	1 cut(s)	646
PfoI	TCCNGGA	1 cut(s)	1444
PkrI	GCNGC	4 cut(s)	378, 1002, 1039, 1100
PleI	GAGTC	5 cut(s)	595, 667, 707, 1337, 1406
PluTI	GGCGCC	1 cut(s)	1001
PpsI	GAGTC	5 cut(s)	595, 667, 707, 1337, 1406
PsiI	TTATAA	2 cut(s)	774, 1302
Psp124BI	GAGCTC	1 cut(s)	145
Psp1406I	AACGTT	1 cut(s)	1057
Psp6I	CCWGG	5 cut(s)	369, 406, 634, 1444, 1487
PspFI	CCCAGC	1 cut(s)	1375
PspGI	CCWGG	5 cut(s)	369, 406, 634, 1444, 1487
PspN4I	GGNNCC	5 cut(s)	21, 909, 999, 1255, 1554
PspPI	GGNCC	3 cut(s)	410, 467, 907
PstI	CTGCAG	2 cut(s)	1089, 1564
PsuI	RGATCY	3 cut(s)	787, 1552, 1637
PvuII	CAGCTG	2 cut(s)	818, 1379
RsaI	GTAC	6 cut(s)	21, 48, 212, 727, 1201, 1506
RsaNI	GTAC	6 cut(s)	20, 47, 211, 726, 1200, 1505
RseI	CAYNNNNRTG	1 cut(s)	1293
Rsr2I	CGGWCCG	1 cut(s)	467
RsrII	CGGWCCG	1 cut(s)	467
SacI	GAGCTC	1 cut(s)	145
SalI	GTCGAC	3 cut(s)	96, 113, 710
SaqAI	TTAA	5 cut(s)	1046, 1362, 1598, 1616, 1628
SatI	GCNGC	4 cut(s)	377, 1001, 1038, 1099
Sau3AI	GATC	5 cut(s)	9, 787, 796, 1552, 1637
Sau96I	GGNCC	3 cut(s)	410, 467, 907
SbfI	CCTGCAGG	1 cut(s)	1564
ScaI	AGTACT	1 cut(s)	1506
SchI	GAGTC	5 cut(s)	595, 667, 707, 1337, 1407
ScrFI	CCNGG	5 cut(s)	371, 408, 636, 1446, 1489
SdaI	CCTGCAGG	1 cut(s)	1564
SduI	GDGCHC	2 cut(s)	145, 316
SfaNI	GCATC	2 cut(s)	1020, 1049
SfcI	CTRYAG	3 cut(s)	1085, 1194, 1560
SfoI	GGCGCC	1 cut(s)	999
SfuI	TTCGAA	1 cut(s)	865
SinI	GGWCC	2 cut(s)	467, 907
SmiMI	CAYNNNNRTG	1 cut(s)	1293
SmlI	CTYRAG	1 cut(s)	144
SmoI	CTYRAG	1 cut(s)	144
SphI	GCATGC	1 cut(s)	1484
Sse8387I	CCTGCAGG	1 cut(s)	1564
SseBI	AGGCCT	1 cut(s)	848
SsiI	CCGC	7 cut(s)	492, 511, 524, 677, 766, 873, 1001
SspDI	GGCGCC	1 cut(s)	997
SspI	AATATT	2 cut(s)	355, 418
SspMI	CTAG	3 cut(s)	41, 429, 981
SstI	GAGCTC	1 cut(s)	145
StuI	AGGCCT	1 cut(s)	848
StyD4I	CCNGG	5 cut(s)	369, 406, 634, 1444, 1487
StyI	CCWWGG	1 cut(s)	1249
TaiI	ACGT	3 cut(s)	1060, 1354, 1536
TaqI	TCGA	6 cut(s)	97, 114, 251, 711, 865, 1152
TatI	WGTACW	2 cut(s)	46, 1504
TauI	GCSGC	1 cut(s)	1003
TfiI	GAWTC	9 cut(s)	82, 89, 135, 328, 667, 821, 917, 1428, 1589
Tru1I	TTAA	5 cut(s)	1046, 1362, 1598, 1616, 1628
Tru9I	TTAA	5 cut(s)	1046, 1362, 1598, 1616, 1628
TscAI	CASTG	6 cut(s)	56, 246, 494, 787, 919, 1165
TseFI	GTSAC	3 cut(s)	120, 560, 1063
TseI	GCWGC	3 cut(s)	376, 1037, 1098
Tsp45I	GTSAC	3 cut(s)	120, 560, 1063
TspDTI	ATGAA	3 cut(s)	749, 1194, 1283
TspGWI	ACGGA	2 cut(s)	303, 480
TspRI	CASTG	6 cut(s)	56, 246, 494, 787, 919, 1165
Van91I	CCANNNNNTGG	1 cut(s)	646
VpaK11BI	GGWCC	2 cut(s)	467, 907
XapI	RAATTY	3 cut(s)	58, 222, 719
XceI	RCATGY	1 cut(s)	1484
XcmI	CCANNNNNNNNNTGG	1 cut(s)	367
XmiI	GTMKAC	4 cut(s)	97, 114, 711, 1116
XmnI	GAANNNNTTC	2 cut(s)	861, 1185
XspI	CTAG	3 cut(s)	41, 429, 981
ZrmI	AGTACT	1 cut(s)	1506
Zsp2I	ATGCAT	1 cut(s)	1290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.