Lignin degradation and detoxification of lignin-derived products
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 124 |
| AciI | CCGC | 1 cut(s) | 124 |
| AcsI | RAATTY | 1 cut(s) | 112 |
| AfaI | GTAC | 1 cut(s) | 61 |
| AjnI | CCWGG | 1 cut(s) | 17 |
| AleI | CACNNNNGTG | 1 cut(s) | 224 |
| Alw26I | GTCTC | 1 cut(s) | 97 |
| Ama87I | CYCGRG | 1 cut(s) | 158 |
| ApeKI | GCWGC | 1 cut(s) | 98 |
| ApoI | RAATTY | 1 cut(s) | 112 |
| AvaI | CYCGRG | 1 cut(s) | 158 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 36, 68 |
| BbvI | GCAGC | 1 cut(s) | 110 |
| BccI | CCATC | 1 cut(s) | 62 |
| BciT130I | CCWGG | 1 cut(s) | 19 |
| BcoDI | GTCTC | 1 cut(s) | 97 |
| BfaI | CTAG | 1 cut(s) | 144 |
| BfmI | CTRYAG | 1 cut(s) | 35 |
| BisI | GCNGC | 1 cut(s) | 99 |
| BlsI | GCNGC | 1 cut(s) | 100 |
| BmcAI | AGTACT | 1 cut(s) | 61 |
| Bme1390I | CCNGG | 1 cut(s) | 19 |
| BmeT110I | CYCGRG | 1 cut(s) | 158 |
| BmrFI | CCNGG | 1 cut(s) | 19 |
| BpmI | CTGGAG | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 1 cut(s) | 18 |
| Bse1I | ACTGG | 1 cut(s) | 111 |
| BseBI | CCWGG | 1 cut(s) | 19 |
| BseDI | CCNNGG | 1 cut(s) | 18 |
| BseGI | GGATG | 2 cut(s) | 132, 174 |
| BseNI | ACTGG | 1 cut(s) | 111 |
| BseXI | GCAGC | 1 cut(s) | 110 |
| BsiHKCI | CYCGRG | 1 cut(s) | 158 |
| BslFI | GGGAC | 1 cut(s) | 100 |
| BsmAI | GTCTC | 1 cut(s) | 97 |
| BsmFI | GGGAC | 1 cut(s) | 100 |
| BsmI | GAATGC | 1 cut(s) | 195 |
| BsoBI | CYCGRG | 1 cut(s) | 158 |
| BspACI | CCGC | 1 cut(s) | 124 |
| BspQI | GCTCTTC | 1 cut(s) | 114 |
| BsrBI | CCGCTC | 1 cut(s) | 124 |
| BsrI | ACTGG | 1 cut(s) | 111 |
| BssECI | CCNNGG | 1 cut(s) | 18 |
| Bst2UI | CCWGG | 1 cut(s) | 19 |
| Bst6I | CTCTTC | 1 cut(s) | 114 |
| BstC8I | GCNNGC | 1 cut(s) | 206 |
| BstF5I | GGATG | 2 cut(s) | 132, 174 |
| BstMAI | GTCTC | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 107 |
| BstNI | CCWGG | 1 cut(s) | 19 |
| BstSCI | CCNGG | 1 cut(s) | 17 |
| BstSFI | CTRYAG | 1 cut(s) | 35 |
| BstV1I | GCAGC | 1 cut(s) | 110 |
| BtsCI | GGATG | 2 cut(s) | 132, 174 |
| Cac8I | GCNNGC | 1 cut(s) | 206 |
| Csp6I | GTAC | 1 cut(s) | 60 |
| CviJI | RGCY | 2 cut(s) | 17, 143 |
| CviKI_1 | RGCY | 2 cut(s) | 17, 143 |
| CviQI | GTAC | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 1 cut(s) | 114 |
| EarI | CTCTTC | 1 cut(s) | 114 |
| Eco88I | CYCGRG | 1 cut(s) | 158 |
| EcoRII | CCWGG | 1 cut(s) | 17 |
| FaiI | YATR | 4 cut(s) | 53, 175, 231, 238 |
| FaqI | GGGAC | 1 cut(s) | 100 |
| Fnu4HI | GCNGC | 1 cut(s) | 99 |
| FokI | GGATG | 2 cut(s) | 139, 181 |
| Fsp4HI | GCNGC | 1 cut(s) | 99 |
| FspBI | CTAG | 1 cut(s) | 144 |
| GluI | GCNGC | 1 cut(s) | 99 |
| GsuI | CTGGAG | 1 cut(s) | 48 |
| HinfI | GANTC | 2 cut(s) | 29, 156 |
| Hpy188III | TCNNGA | 1 cut(s) | 65 |
| HpyCH4V | TGCA | 3 cut(s) | 181, 233, 240 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 107 |
| LguI | GCTCTTC | 1 cut(s) | 114 |
| LpnPI | CCDG | 6 cut(s) | 4, 31, 69, 78, 92, 200 |
| Lsp1109I | GCAGC | 1 cut(s) | 110 |
| MaeI | CTAG | 1 cut(s) | 144 |
| MaeIII | GTNAC | 2 cut(s) | 79, 217 |
| MbiI | CCGCTC | 1 cut(s) | 124 |
| MboII | GAAGA | 3 cut(s) | 35, 56, 131 |
| MluCI | AATT | 1 cut(s) | 112 |
| MlyI | GAGTC | 1 cut(s) | 150 |
| MnlI | CCTC | 2 cut(s) | 133, 154 |
| MslI | CAYNNNNRTG | 1 cut(s) | 224 |
| MspR9I | CCNGG | 1 cut(s) | 19 |
| Mva1269I | GAATGC | 1 cut(s) | 195 |
| MvaI | CCWGG | 1 cut(s) | 19 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 107 |
| NmuCI | GTSAC | 1 cut(s) | 217 |
| OliI | CACNNNNGTG | 1 cut(s) | 224 |
| PaeR7I | CTCGAG | 1 cut(s) | 158 |
| PciSI | GCTCTTC | 1 cut(s) | 114 |
| PctI | GAATGC | 1 cut(s) | 195 |
| PfeI | GAWTC | 1 cut(s) | 29 |
| PkrI | GCNGC | 1 cut(s) | 100 |
| PleI | GAGTC | 1 cut(s) | 150 |
| PpsI | GAGTC | 1 cut(s) | 150 |
| Psp6I | CCWGG | 1 cut(s) | 17 |
| PspGI | CCWGG | 1 cut(s) | 17 |
| PspXI | VCTCGAGB | 1 cut(s) | 158 |
| RsaI | GTAC | 1 cut(s) | 61 |
| RsaNI | GTAC | 1 cut(s) | 60 |
| RseI | CAYNNNNRTG | 1 cut(s) | 224 |
| SapI | GCTCTTC | 1 cut(s) | 114 |
| SatI | GCNGC | 1 cut(s) | 99 |
| ScaI | AGTACT | 1 cut(s) | 61 |
| SchI | GAGTC | 1 cut(s) | 150 |
| ScrFI | CCNGG | 1 cut(s) | 19 |
| SetI | ASST | 2 cut(s) | 11, 95 |
| SfcI | CTRYAG | 1 cut(s) | 35 |
| Sfr274I | CTCGAG | 1 cut(s) | 158 |
| SlaI | CTCGAG | 1 cut(s) | 158 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 224 |
| SmlI | CTYRAG | 1 cut(s) | 158 |
| SmoI | CTYRAG | 1 cut(s) | 158 |
| Sse9I | AATT | 1 cut(s) | 112 |
| SsiI | CCGC | 1 cut(s) | 124 |
| SspMI | CTAG | 1 cut(s) | 144 |
| StyD4I | CCNGG | 1 cut(s) | 17 |
| TaqI | TCGA | 1 cut(s) | 159 |
| TasI | AATT | 1 cut(s) | 112 |
| TatI | WGTACW | 1 cut(s) | 59 |
| TfiI | GAWTC | 1 cut(s) | 29 |
| TseFI | GTSAC | 1 cut(s) | 217 |
| TseI | GCWGC | 1 cut(s) | 98 |
| Tsp45I | GTSAC | 1 cut(s) | 217 |
| XapI | RAATTY | 1 cut(s) | 112 |
| XhoI | CTCGAG | 1 cut(s) | 158 |
| XspI | CTAG | 1 cut(s) | 144 |
| ZrmI | AGTACT | 1 cut(s) | 61 |