Rorug05G0399800

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000429
Physical Location & Seq
Forward (+)
54947483 .. 54951224
3742 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0399800.1

Sequence Viewer

Length: 1761 bp
ATGGAGGTTCAAATTTCACGGATACAGAGTGGTGATTTAGAAGAAAATGCTCCCGGAAGTGTATATTCAGGGGAATCTTTGACGGCAGGGTACTTCAATAGAGGTTTGGAACCTAGATCTTTTGAAAGGGTAATGAGTACCAAAGGATTAAAATCTCATTGTGGAGTATTGGTTGACAAGCTAAAGCTAATCAGGAAGAATAGAATACTTTTTTGGTCTCTTAGCGCGCTCTTACTGGATCCACTTTTCTGTTATATCCTTGTCATGAGTGATGAGAAGAAGTGCATTAGATTGGACAGAATATTGGGGATTATAGCTACTGTTTTGCGATCCCTCAGTGACCTCTACTACATATTTCATATCATCAATCATTTCGATGCTAGATTTGTTACTCGTTCAGTTGCAGTGGACATACTTGTAGTTCTTCCACTTCCGCAGGTGCTAGTTTTTGCTGTAGTTCCCAATCTAAATGACTCCAGAATCTACAGTGCTGCAAAGTCCTTGAACTTTTTATTTATAATTCAGTACGTGCTGAGGGTTCTTCGAACCTGCTCCTTGTTAACACTCATTATAAGGGCTTCTGGCATCCTTGCTGAATCTGCATGGGCTAATCTCTCTTTCTTTATGCTGGCGAGTCATGTCCTTGGAGCCTTTTGGTATTTGTTTTCTATAGAAAGGAAAGCAACTTGCTGGCTGGAAGCATGTAAACATCTCGGTGTTAATTGTTCTTTGTACTGTGATGACACCTTAAGATCTAGCACACTTCTGAATGATTCTTGCTCTACAAATTCTACACTTTTTGATTTTGGAATATACTCTGATGCCCTTGAATCTGGAGTTGTTGATTCAACTCATTTTTTACAAAGGATTTCTTACGGCTTTTGGTGGGGACTGCAAAATCTCAGTTCTCTTGGTCAAAGCCTCAAAACAAGTATCCATATCTGGGAAATTTGTTTTGCAGTTTCTGTTTCAATATGTGGGTTGGTACTATTTGCATTTCTTATTGGTAACATGCAGACATATTTGCTATCAAAAGTTGCAAGATCAGAGGAAATGAGAGCCAAGCAACAAGAAATAGCAGTGTGGATGTCTTTCCATTCACTTCCGCGGAATCTTAAAACTCGAATTTGGCAGTCCCTGAAATACAAGCTCAAGGAAAACACGGGGATTGATGTGGAAACTTTTCTTCACCTTCTTCCTCGTGAACTCAGTAAGGATATAAAGCGACATATTTGCTATAATCCACTCAGAGAAGTGCCATTACTTCGAAATAAGAATGAGGAACTGTTGGACGCAATCTGTGAACATCTGAAGCCAGTGCTTTACAAAAAGAATAGCATCATCTTTCAAGAGGGAGAACCACTGGCTGAGATGCTGTTTATCACCCGTGGCAAGATAGTGACTTACACCACCTCTGCCATGGTAAGATTTCTTGGAAATGGTGACTGCTATGGTGAAGAACTTCTCGATTGGATGCTACGTTCTTACGGTATAGAGAATTGGGAGCTGAGTTCTACCAACATATCCAACTTTCCCTTGTCAAGCAAAACTGTCAAAGCTCAAACTGAAGTTGAAGTCTTTGTTCTAAGGGTCCATCAGTTAAAGCTTATAGTGAAGAAATTCTGGTTCTGTTTTAGTAAGGAGATAAGTCTCAAGCCTTGGGCTGCATATACTTTGCAAGCAGCATGGCGCCGCTACAGAAGGAGTCAACTGTCTTCTAATGTGCCTTTTCAAACTAGAGGTTTAGTTCTAGAGTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

586

Amino Acids

67.18

Weight (kDa)

8.99

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
cNMP_binding PF00027 441 - 490 7e-06 Cyclic nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000429)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11330 FvH4_2g11330 FvH4_2g21630 FvH4_2g21630 FvH4_2g21630 FvH4_2g21630 FvH4_2g21772 FvH4_2g21772 FvH4_2g21773 FvH4_2g21774
malus_domestica MD05G1199100.v1.1 MD05G1200000.v1.1 MD05G1201900.v1.1 MD10G1188800.v1.1 MD10G1189600.v1.1 MD10G1189900.v1.1 MD15G1001500.v1.1
prunus_persica Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.8G224200_v2.0.a1 Prupe.8G225800_v2.0.a1
pyrus_communis pycom05g18530 pycom05g18630 pycom05g18650 pycom05g18870 pycom15g00070
rosa_chinensis RchiOBHm_Chr4g0407601 RchiOBHm_Chr6g0288311 RchiOBHm_Chr6g0288451 RchiOBHm_Chr6g0288461 RchiOBHm_Chr6g0288471 RchiOBHm_Chr6g0288491 RchiOBHm_Chr6g0288511 RchiOBHm_Chr6g0288521 RchiOBHm_Chr7g0188451
rosa_laevigata RLG00000004695 RLG00000008705 RLG00000010120 RLG00000012396 RLG00000012402 RLG00000012416 RLG00000017369
rosa_multiflora Rmu_co8451481.1_g000001 Rmu_co8483209.1_g000001 Rmu_sc0000952.1_g000001 Rmu_sc0001038.1_g000007 Rmu_sc0004806.1_g000002 Rmu_sc0006439.1_g000001 Rmu_sc0011657.1_g000015
rosa_roxburghii Rroxscaffold_3G00266420 Rroxscaffold_5G00334150 Rroxscaffold_5G00352210 Rroxscaffold_7G00180010 Rroxscaffold_7G00180020 Rroxscaffold_7G00180030 Rroxscaffold_7G00180040 Rroxscaffold_7G00180180
rosa_rugosa Rorug04G0080800 Rorug05G0399800 Rorug06G0195400 Rorug06G0195400 Rorug06G0195600 Rorug06G0196500 Rorug06G0196600 Rorug06G0490400
rosa_samantha Rh2BG181900 Rh2DG180700 Rh4AG145500 Rh4BG143300 Rh4CG152200 Rh6AG306700 Rh6AG308200 Rh6AG308300 Rh6AG308500 Rh6AG308600 Rh6BG312500 Rh6BG313400 Rh6BG313800 Rh6BG313900 Rh6CG321300 Rh6DG305500 Rh6DG306700 Rh6DG306800 Rh6DG306900 Rh6DG307100 Rh7AG095200 Rh7BG096700 Rh7CG097500
rosa_wichuraiana Rw4G011820 Rw6G026520 Rw6G026640 Rw6G026650 Rw7G008210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 518, 572, 1759
AarI CACCTGC 1 cut(s) 427
Acc36I ACCTGC 2 cut(s) 427, 557
AccB1I GGYRCC 1 cut(s) 1689
AccII CGCG 2 cut(s) 227, 1108
AciI CCGC 4 cut(s) 434, 1106, 1108, 1693
AclWI GGATC 3 cut(s) 233, 246, 324
AcsI RAATTY 5 cut(s) 12, 787, 948, 1125, 1619
AcuI CTGAAG 2 cut(s) 1331, 1587
AcyI GRCGYC 1 cut(s) 1690
AfaI GTAC 5 cut(s) 92, 139, 527, 734, 987
AfiI CCNNNNNNNGG 1 cut(s) 943
AflII CTTAAG 1 cut(s) 748
AjuI GAANNNNNNNTTGG 2 cut(s) 196, 228
AloI GAACNNNNNNTCC 2 cut(s) 1465, 1497
AluBI AGCT 7 cut(s) 181, 187, 317, 1150, 1507, 1559, 1606
AluI AGCT 7 cut(s) 181, 187, 317, 1150, 1507, 1559, 1606
Alw26I GTCTC 2 cut(s) 222, 1655
AlwI GGATC 3 cut(s) 233, 246, 324
AlwNI CAGNNNCTG 2 cut(s) 965, 1138
ApeKI GCWGC 3 cut(s) 491, 1664, 1682
ApoI RAATTY 5 cut(s) 12, 787, 948, 1125, 1619
Asp700I GAANNNNTTC 3 cut(s) 1182, 1461, 1619
AspLEI GCGC 3 cut(s) 227, 229, 1692
AspS9I GGNCC 1 cut(s) 1591
AsuC2I CCSGG 1 cut(s) 54
AsuHPI GGTGA 5 cut(s) 44, 1181, 1375, 1454, 1466
AsuII TTCGAA 2 cut(s) 544, 1267
AvaII GGWCC 1 cut(s) 1591
BamHI GGATCC 1 cut(s) 238
BanI GGYRCC 1 cut(s) 1689
BarI GAAGNNNNNNTAC 2 cut(s) 1245, 1277
BauI CACGAG 1 cut(s) 1200
BbsI GAAGAC 1 cut(s) 1707
BbvCI CCTCAGC 1 cut(s) 533
BbvI GCAGC 3 cut(s) 478, 1651, 1694
BccI CCATC 1 cut(s) 1602
BceAI ACGGC 2 cut(s) 99, 892
BcgI CGANNNNNNTGC 2 cut(s) 1215, 1249
BciVI GTATCC 2 cut(s) 15, 944
BcnI CCSGG 1 cut(s) 54
BcoDI GTCTC 2 cut(s) 222, 1655
BfaI CTAG 6 cut(s) 114, 381, 443, 756, 1737, 1751
BfmI CTRYAG 4 cut(s) 453, 484, 669, 1696
BfoI RGCGCY 1 cut(s) 1693
BfrI CTTAAG 1 cut(s) 748
BfuAI ACCTGC 2 cut(s) 427, 557
BfuI GTATCC 2 cut(s) 15, 944
BglII AGATCT 2 cut(s) 116, 752
BisI GCNGC 4 cut(s) 492, 1665, 1683, 1693
BlsI GCNGC 4 cut(s) 493, 1666, 1684, 1694
Bme1390I CCNGG 1 cut(s) 54
Bme18I GGWCC 1 cut(s) 1591
BmgT120I GGNCC 1 cut(s) 1591
BmiI GGNNCC 5 cut(s) 111, 240, 649, 1592, 1691
BmrFI CCNGG 1 cut(s) 54
BmsI GCATC 6 cut(s) 367, 594, 811, 1347, 1362, 1464
BpiI GAAGAC 1 cut(s) 1707
BpmI CTGGAG 2 cut(s) 460, 855
Bpu10I CCTNAGC 1 cut(s) 533
Bpu14I TTCGAA 2 cut(s) 544, 1267
BpuEI CTTGAG 2 cut(s) 1136, 1637
BpuMI CCSGG 1 cut(s) 54
BsaAI YACGTR 1 cut(s) 529
BsaBI GATNNNNATC 1 cut(s) 151
BsaHI GRCGYC 1 cut(s) 1690
BsaI GGTCTC 1 cut(s) 222
BsaJI CCNNGG 5 cut(s) 643, 1106, 1387, 1419, 1658
BsaXI ACNNNNNCTCC 2 cut(s) 156, 186
Bsc4I CCNNNNNNNGG 1 cut(s) 943
Bse1I ACTGG 3 cut(s) 240, 1316, 1368
Bse8I GATNNNNATC 1 cut(s) 151
BseDI CCNNGG 5 cut(s) 643, 1106, 1387, 1419, 1658
BseGI GGATG 3 cut(s) 585, 1092, 1479
BseJI GATNNNNATC 1 cut(s) 151
BseLI CCNNNNNNNGG 1 cut(s) 943
BseMII CTCAG 7 cut(s) 349, 524, 916, 1222, 1261, 1359, 1499
BseNI ACTGG 3 cut(s) 240, 1316, 1368
BsePI GCGCGC 1 cut(s) 225
BseXI GCAGC 3 cut(s) 478, 1651, 1694
Bsh1236I CGCG 2 cut(s) 227, 1108
BshNI GGYRCC 1 cut(s) 1689
BsiSI CCGG 1 cut(s) 54
BslFI GGGAC 2 cut(s) 903, 1120
BslI CCNNNNNNNGG 1 cut(s) 943
BsmAI GTCTC 2 cut(s) 222, 1655
BsmFI GGGAC 2 cut(s) 903, 1120
Bso31I GGTCTC 1 cut(s) 222
Bsp119I TTCGAA 2 cut(s) 544, 1267
Bsp143I GATC 5 cut(s) 116, 238, 329, 752, 1043
Bsp19I CCATGG 1 cut(s) 1419
BspACI CCGC 4 cut(s) 434, 1106, 1108, 1693
BspCNI CTCAG 7 cut(s) 348, 525, 915, 1221, 1260, 1360, 1500
BspFNI CGCG 2 cut(s) 227, 1108
BspHI TCATGA 1 cut(s) 264
BspLI GGNNCC 5 cut(s) 111, 240, 649, 1592, 1691
BspMI ACCTGC 2 cut(s) 427, 557
BspPI GGATC 3 cut(s) 233, 246, 324
BspT104I TTCGAA 2 cut(s) 544, 1267
BspT107I GGYRCC 1 cut(s) 1689
BspTI CTTAAG 1 cut(s) 748
BspTNI GGTCTC 1 cut(s) 222
BsrI ACTGG 3 cut(s) 240, 1316, 1368
BssECI CCNNGG 5 cut(s) 643, 1106, 1387, 1419, 1658
BssHII GCGCGC 1 cut(s) 225
BssMI GATC 5 cut(s) 116, 238, 329, 752, 1043
BssNI GRCGYC 1 cut(s) 1690
BssSI CACGAG 1 cut(s) 1200
BssT1I CCWWGG 3 cut(s) 643, 1419, 1658
Bst2BI CACGAG 1 cut(s) 1200
Bst4CI ACNGT 7 cut(s) 322, 488, 737, 1287, 1490, 1552, 1713
BstACI GRCGYC 1 cut(s) 1690
BstAFI CTTAAG 1 cut(s) 748
BstBAI YACGTR 1 cut(s) 529
BstBI TTCGAA 2 cut(s) 544, 1267
BstC8I GCNNGC 4 cut(s) 227, 630, 692, 1680
BstDEI CTNAG 9 cut(s) 221, 335, 533, 902, 1208, 1247, 1368, 1508, 1586
BstDSI CCRYGG 3 cut(s) 1106, 1387, 1419
BstF5I GGATG 3 cut(s) 585, 1092, 1479
BstFNI CGCG 2 cut(s) 227, 1108
BstH2I RGCGCY 1 cut(s) 1693
BstHHI GCGC 3 cut(s) 227, 229, 1692
BstKTI GATC 5 cut(s) 119, 241, 332, 755, 1046
BstMAI GTCTC 2 cut(s) 222, 1655
BstMBI GATC 5 cut(s) 116, 238, 329, 752, 1043
BstMWI GCNNNNNNNGC 1 cut(s) 599
BstNSI RCATGY 2 cut(s) 705, 1015
BstSCI CCNGG 1 cut(s) 52
BstSFI CTRYAG 4 cut(s) 453, 484, 669, 1696
BstUI CGCG 2 cut(s) 227, 1108
BstV1I GCAGC 3 cut(s) 478, 1651, 1694
BstV2I GAAGAC 1 cut(s) 1707
BstX2I RGATCY 3 cut(s) 116, 238, 752
BstYI RGATCY 3 cut(s) 116, 238, 752
BsuI GTATCC 2 cut(s) 15, 944
BtgI CCRYGG 3 cut(s) 1106, 1387, 1419
BtsCI GGATG 3 cut(s) 585, 1092, 1479
BtsI GCAGTG 2 cut(s) 411, 1086
BtsIMutI CAGTG 6 cut(s) 343, 411, 493, 1086, 1323, 1361
BveI ACCTGC 2 cut(s) 427, 557
Cac8I GCNNGC 4 cut(s) 227, 630, 692, 1680
CaiI CAGNNNCTG 2 cut(s) 965, 1138
CciI TCATGA 1 cut(s) 264
CfoI GCGC 3 cut(s) 227, 229, 1692
Cfr13I GGNCC 1 cut(s) 1591
Cfr42I CCGCGG 1 cut(s) 1109
CseI GACGC 1 cut(s) 1301
Csp6I GTAC 5 cut(s) 91, 138, 526, 733, 986
CviAII CATG 7 cut(s) 265, 603, 638, 702, 1012, 1420, 1686
CviQI GTAC 5 cut(s) 91, 138, 526, 733, 986
DdeI CTNAG 9 cut(s) 221, 335, 533, 902, 1208, 1247, 1368, 1508, 1586
DinI GGCGCC 1 cut(s) 1691
DpnI GATC 5 cut(s) 118, 240, 331, 754, 1045
DpnII GATC 5 cut(s) 116, 238, 329, 752, 1043
Eco130I CCWWGG 3 cut(s) 643, 1419, 1658
Eco31I GGTCTC 1 cut(s) 222
Eco47I GGWCC 1 cut(s) 1591
Eco57I CTGAAG 2 cut(s) 1331, 1587
EcoT14I CCWWGG 3 cut(s) 643, 1419, 1658
EgeI GGCGCC 1 cut(s) 1691
EheI GGCGCC 1 cut(s) 1691
ErhI CCWWGG 3 cut(s) 643, 1419, 1658
FaeI CATG 7 cut(s) 268, 606, 641, 705, 1015, 1423, 1689
FalI AAGNNNNNCTT 2 cut(s) 856, 888
FaqI GGGAC 2 cut(s) 903, 1120
FatI CATG 7 cut(s) 264, 602, 637, 701, 1011, 1419, 1685
Fnu4HI GCNGC 4 cut(s) 492, 1665, 1683, 1693
FokI GGATG 3 cut(s) 572, 1099, 1486
Fsp4HI GCNGC 4 cut(s) 492, 1665, 1683, 1693
FspBI CTAG 6 cut(s) 114, 381, 443, 756, 1737, 1751
GlaI GCGC 3 cut(s) 226, 228, 1691
GluI GCNGC 4 cut(s) 492, 1665, 1683, 1693
GsuI CTGGAG 2 cut(s) 460, 855
HaeII RGCGCY 1 cut(s) 1693
HapII CCGG 1 cut(s) 54
HgaI GACGC 1 cut(s) 1301
HhaI GCGC 3 cut(s) 227, 229, 1692
Hin1I GRCGYC 1 cut(s) 1690
Hin1II CATG 7 cut(s) 268, 606, 641, 705, 1015, 1423, 1689
Hin6I GCGC 3 cut(s) 225, 227, 1690
HinP1I GCGC 3 cut(s) 225, 227, 1690
HincII GTYRAC 3 cut(s) 175, 561, 1709
HindII GTYRAC 3 cut(s) 175, 561, 1709
HindIII AAGCTT 1 cut(s) 1604
HpaI GTTAAC 1 cut(s) 561
HpaII CCGG 1 cut(s) 54
HphI GGTGA 5 cut(s) 44, 1181, 1375, 1454, 1466
Hpy166II GTNNAC 7 cut(s) 175, 409, 561, 707, 1205, 1304, 1709
Hpy188I TCNGA 5 cut(s) 768, 820, 1048, 1250, 1311
Hpy188III TCNNGA 8 cut(s) 193, 265, 477, 834, 1202, 1349, 1466, 1751
Hpy8I GTNNAC 7 cut(s) 175, 409, 561, 707, 1205, 1304, 1709
HpyAV CCTTC 2 cut(s) 1202, 1695
HpyCH4III ACNGT 7 cut(s) 322, 488, 737, 1287, 1490, 1552, 1713
HpyCH4IV ACGT 2 cut(s) 528, 1480
HpyF10VI GCNNNNNNNGC 1 cut(s) 599
HpyF3I CTNAG 9 cut(s) 221, 335, 533, 902, 1208, 1247, 1368, 1508, 1586
HpySE526I ACGT 2 cut(s) 528, 1480
Hsp92I GRCGYC 1 cut(s) 1690
Hsp92II CATG 7 cut(s) 268, 606, 641, 705, 1015, 1423, 1689
HspAI GCGC 3 cut(s) 225, 227, 1690
KasI GGCGCC 1 cut(s) 1689
KspAI GTTAAC 1 cut(s) 561
KspI CCGCGG 1 cut(s) 1109
Kzo9I GATC 5 cut(s) 116, 238, 329, 752, 1043
LmnI GCTCC 4 cut(s) 55, 557, 647, 1504
Lsp1109I GCAGC 3 cut(s) 478, 1651, 1694
LweI GCATC 6 cut(s) 367, 594, 811, 1347, 1362, 1464
MaeI CTAG 6 cut(s) 114, 381, 443, 756, 1737, 1751
MaeII ACGT 2 cut(s) 528, 1480
MaeIII GTNAC 5 cut(s) 338, 388, 1007, 1399, 1442
MalI GATC 5 cut(s) 118, 240, 331, 754, 1045
MboI GATC 5 cut(s) 116, 238, 329, 752, 1043
MflI RGATCY 3 cut(s) 116, 238, 752
MluCI AATT 8 cut(s) 12, 519, 721, 787, 948, 1125, 1498, 1619
Mly113I GGCGCC 1 cut(s) 1690
MlyI GAGTC 3 cut(s) 467, 643, 1714
MmeI TCCRAC 2 cut(s) 1269, 1551
MroXI GAANNNNTTC 3 cut(s) 1182, 1461, 1619
MseI TTAA 6 cut(s) 149, 560, 720, 749, 1116, 1601
MslI CAYNNNNRTG 2 cut(s) 375, 714
MspA1I CMGCKG 1 cut(s) 1108
MspCI CTTAAG 1 cut(s) 748
MspI CCGG 1 cut(s) 54
MspR9I CCNGG 1 cut(s) 54
MvnI CGCG 2 cut(s) 227, 1108
MwoI GCNNNNNNNGC 1 cut(s) 599
NarI GGCGCC 1 cut(s) 1690
NciI CCSGG 1 cut(s) 54
NcoI CCATGG 1 cut(s) 1419
NdeII GATC 5 cut(s) 116, 238, 329, 752, 1043
NlaIII CATG 7 cut(s) 268, 606, 641, 705, 1015, 1423, 1689
NlaIV GGNNCC 5 cut(s) 111, 240, 649, 1592, 1691
NmuCI GTSAC 3 cut(s) 338, 1399, 1442
NspI RCATGY 2 cut(s) 705, 1015
NspV TTCGAA 2 cut(s) 544, 1267
PagI TCATGA 1 cut(s) 264
PaqCI CACCTGC 1 cut(s) 427
PauI GCGCGC 1 cut(s) 225
PdmI GAANNNNTTC 3 cut(s) 1182, 1461, 1619
PfeI GAWTC 7 cut(s) 74, 480, 596, 773, 830, 845, 1111
PfoI TCCNGGA 1 cut(s) 52
PkrI GCNGC 4 cut(s) 493, 1666, 1684, 1694
PleI GAGTC 3 cut(s) 467, 642, 1713
PluTI GGCGCC 1 cut(s) 1693
PpsI GAGTC 3 cut(s) 467, 642, 1713
Ppu21I YACGTR 1 cut(s) 529
PsiI TTATAA 3 cut(s) 518, 572, 1759
PspN4I GGNNCC 5 cut(s) 111, 240, 649, 1592, 1691
PspPI GGNCC 1 cut(s) 1591
PstNI CAGNNNCTG 2 cut(s) 965, 1138
PsuI RGATCY 3 cut(s) 116, 238, 752
PteI GCGCGC 1 cut(s) 225
RsaI GTAC 5 cut(s) 92, 139, 527, 734, 987
RsaNI GTAC 5 cut(s) 91, 138, 526, 733, 986
RseI CAYNNNNRTG 2 cut(s) 375, 714
SacII CCGCGG 1 cut(s) 1109
SaqAI TTAA 6 cut(s) 149, 560, 720, 749, 1116, 1601
SatI GCNGC 4 cut(s) 492, 1665, 1683, 1693
Sau3AI GATC 5 cut(s) 116, 238, 329, 752, 1043
Sau96I GGNCC 1 cut(s) 1591
SchI GAGTC 3 cut(s) 467, 643, 1714
ScrFI CCNGG 1 cut(s) 54
SfaNI GCATC 6 cut(s) 367, 594, 811, 1347, 1362, 1464
SfcI CTRYAG 4 cut(s) 453, 484, 669, 1696
SfoI GGCGCC 1 cut(s) 1691
Sfr303I CCGCGG 1 cut(s) 1109
SfuI TTCGAA 2 cut(s) 544, 1267
SgrBI CCGCGG 1 cut(s) 1109
SinI GGWCC 1 cut(s) 1591
SmiMI CAYNNNNRTG 2 cut(s) 375, 714
SmlI CTYRAG 3 cut(s) 748, 1151, 1652
SmoI CTYRAG 3 cut(s) 748, 1151, 1652
Sse9I AATT 8 cut(s) 12, 519, 721, 787, 948, 1125, 1498, 1619
SsiI CCGC 4 cut(s) 434, 1106, 1108, 1693
SspDI GGCGCC 1 cut(s) 1689
SspI AATATT 1 cut(s) 303
SspMI CTAG 6 cut(s) 114, 381, 443, 756, 1737, 1751
StyD4I CCNGG 1 cut(s) 52
StyI CCWWGG 3 cut(s) 643, 1419, 1658
TaaI ACNGT 7 cut(s) 322, 488, 737, 1287, 1490, 1552, 1713
TaiI ACGT 2 cut(s) 531, 1483
TaqI TCGA 5 cut(s) 375, 544, 1123, 1267, 1467
TasI AATT 8 cut(s) 12, 519, 721, 787, 948, 1125, 1498, 1619
TatI WGTACW 1 cut(s) 732
TauI GCSGC 1 cut(s) 1695
TfiI GAWTC 7 cut(s) 74, 480, 596, 773, 830, 845, 1111
Tru1I TTAA 6 cut(s) 149, 560, 720, 749, 1116, 1601
Tru9I TTAA 6 cut(s) 149, 560, 720, 749, 1116, 1601
TscAI CASTG 6 cut(s) 343, 411, 493, 1086, 1323, 1368
TseFI GTSAC 3 cut(s) 338, 1399, 1442
TseI GCWGC 3 cut(s) 491, 1664, 1682
Tsp45I GTSAC 3 cut(s) 338, 1399, 1442
TspDTI ATGAA 1 cut(s) 347
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 6 cut(s) 343, 411, 493, 1086, 1323, 1368
Vha464I CTTAAG 1 cut(s) 748
VpaK11BI GGWCC 1 cut(s) 1591
XapI RAATTY 5 cut(s) 12, 787, 948, 1125, 1619
XbaI TCTAGA 1 cut(s) 1750
XceI RCATGY 2 cut(s) 705, 1015
XcmI CCANNNNNNNNNTGG 1 cut(s) 1417
XmnI GAANNNNTTC 3 cut(s) 1182, 1461, 1619
XspI CTAG 6 cut(s) 114, 381, 443, 756, 1737, 1751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.