Prupe.8G225800_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000429
Physical Location & Seq
Forward (+)
20280873 .. 20282529
1657 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G225800.1

Sequence Viewer

Length: 1077 bp
ATGCTGACACTTGTCACCTCTGTCACAATAGCCAGGCGAGGGTTGCAGCTAGAATCGATGACCCTCCAGGATAAGGCTGCACACAAATTAAAACATGGTTGTTGGCCATGGCTGGTTAGGCCATGTAAGAAAGTATCCAATTCATGTCTTACATATTGCCCCCCTGGAACTAGACCCGGAAATGTGCAAGTTTCTATATCTGAGAACATCCCAGTCATTGATTGTCATCAACTTGGTACTGACAAGGCCCAGCTGATCAAGCAAATTACAGAGGCTGCTAAAGAATTTGGATTTTTCCAGCTGATTAATCATGGGGTTCCAGACAATTTGCTGCATAATGTAATGAATGTGGGCAAGGAATTCTTTGAGCTGCCTTCTGAAGACAAAGCAAGCTTCTATTCTGAAGATGCTAGGCAAAGTTGCAGATTGTACACCAGCATTGACTATGTGAGGGAGCAGGTACATTACTGGAGAGACACTTTGAGACACCCTTGTCATCCTCTGGAGGAACACATTGATTTCTGGCCTCAAAAACCGGCTAGTTATCGAGAGGTGTTTGGAAGTTACTCTGTGGAGGTGAGGAAGTTGAGTTTGTGTCTTCTGGATCTTATCTGTAAGCTCAGCCAAGTCCAGTCGACGGCTACAAATTTTTACCCACCATGTCCAGACCCAAGCTTGACCTTGGGATTGCCCAAACACAGTGATGTGAACCTCATAACTCTTCTTCTCCAAGAACAAGTTCATGGGCTTCAAGTCTTGAAAGATGAGCAATGGCTTGCTGTTGAGCCTGTCCCCAATGCATTTGTGGTTAATATAGGCCACATGTTACAGATTATGAGCAATGGGAAGCTGAGCAGTGCAGACCACAGAGTTGTGACAAACAACAAGGTTTCAAGGACCGCAGTCACCAGCTTCAAACATCCTTCTAGCACCTGCCATATTGAGCCTGCAAAAGCCCTAGTTATGGACTTCAATCCACTCTACCAAGCTTTTATATACAAAGATTTTGTTAGTACCTATATAACAGATACTGAGGAAAGAGTATCGCCGCTTGAGCGATATAAGTTCCAAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

359

Amino Acids

40.74

Weight (kDa)

6.94

Isoelectric Point (pI)

48.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000429)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11330 FvH4_2g11330 FvH4_2g21630 FvH4_2g21630 FvH4_2g21630 FvH4_2g21630 FvH4_2g21772 FvH4_2g21772 FvH4_2g21773 FvH4_2g21774
malus_domestica MD05G1199100.v1.1 MD05G1200000.v1.1 MD05G1201900.v1.1 MD10G1188800.v1.1 MD10G1189600.v1.1 MD10G1189900.v1.1 MD15G1001500.v1.1
prunus_persica Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.8G224200_v2.0.a1 Prupe.8G225800_v2.0.a1
pyrus_communis pycom05g18530 pycom05g18630 pycom05g18650 pycom05g18870 pycom15g00070
rosa_chinensis RchiOBHm_Chr4g0407601 RchiOBHm_Chr6g0288311 RchiOBHm_Chr6g0288451 RchiOBHm_Chr6g0288461 RchiOBHm_Chr6g0288471 RchiOBHm_Chr6g0288491 RchiOBHm_Chr6g0288511 RchiOBHm_Chr6g0288521 RchiOBHm_Chr7g0188451
rosa_laevigata RLG00000004695 RLG00000008705 RLG00000010120 RLG00000012396 RLG00000012402 RLG00000012416 RLG00000017369
rosa_multiflora Rmu_co8451481.1_g000001 Rmu_co8483209.1_g000001 Rmu_sc0000952.1_g000001 Rmu_sc0001038.1_g000007 Rmu_sc0004806.1_g000002 Rmu_sc0006439.1_g000001 Rmu_sc0011657.1_g000015
rosa_roxburghii Rroxscaffold_3G00266420 Rroxscaffold_5G00334150 Rroxscaffold_5G00352210 Rroxscaffold_7G00180010 Rroxscaffold_7G00180020 Rroxscaffold_7G00180030 Rroxscaffold_7G00180040 Rroxscaffold_7G00180180
rosa_rugosa Rorug04G0080800 Rorug05G0399800 Rorug06G0195400 Rorug06G0195400 Rorug06G0195600 Rorug06G0196500 Rorug06G0196600 Rorug06G0490400
rosa_samantha Rh2BG181900 Rh2DG180700 Rh4AG145500 Rh4BG143300 Rh4CG152200 Rh6AG306700 Rh6AG308200 Rh6AG308300 Rh6AG308500 Rh6AG308600 Rh6BG312500 Rh6BG313400 Rh6BG313800 Rh6BG313900 Rh6CG321300 Rh6DG305500 Rh6DG306700 Rh6DG306800 Rh6DG306900 Rh6DG307100 Rh7AG095200 Rh7BG096700 Rh7CG097500
rosa_wichuraiana Rw4G011820 Rw6G026520 Rw6G026640 Rw6G026650 Rw7G008210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 941
AasI GACNNNNNNGTC 1 cut(s) 492
Acc36I ACCTGC 2 cut(s) 448, 941
AccI GTMKAC 1 cut(s) 635
AciI CCGC 2 cut(s) 900, 1049
AclWI GGATC 1 cut(s) 612
AcoI YGGCCR 1 cut(s) 104
AcsI RAATTY 3 cut(s) 284, 359, 646
AcuI CTGAAG 2 cut(s) 399, 423
AfaI GTAC 4 cut(s) 238, 431, 462, 1015
AfiI CCNNNNNNNGG 4 cut(s) 39, 73, 637, 964
AflIII ACRYGT 1 cut(s) 822
AgsI TTSAA 5 cut(s) 752, 760, 894, 916, 973
AjnI CCWGG 3 cut(s) 32, 66, 163
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
Alw26I GTCTC 2 cut(s) 468, 478
AlwI GGATC 1 cut(s) 612
AlwNI CAGNNNCTG 2 cut(s) 275, 1031
AoxI GGCC 5 cut(s) 104, 119, 246, 524, 817
ApeKI GCWGC 5 cut(s) 46, 77, 275, 331, 370
ApoI RAATTY 3 cut(s) 284, 359, 646
AseI ATTAAT 1 cut(s) 306
Asp700I GAANNNNTTC 1 cut(s) 738
AspS9I GGNCC 2 cut(s) 247, 897
AsuC2I CCSGG 1 cut(s) 177
AsuHPI GGTGA 3 cut(s) 7, 589, 898
AvaII GGWCC 1 cut(s) 897
BalI TGGCCA 1 cut(s) 106
BbsI GAAGAC 2 cut(s) 387, 590
BbvI GCAGC 5 cut(s) 58, 64, 262, 318, 357
BceAI ACGGC 1 cut(s) 654
BciT130I CCWGG 3 cut(s) 34, 68, 165
BciVI GTATCC 1 cut(s) 145
BclI TGATCA 1 cut(s) 255
BcnI CCSGG 1 cut(s) 177
BcoDI GTCTC 2 cut(s) 468, 478
BfaI CTAG 6 cut(s) 50, 171, 411, 540, 927, 959
BfuAI ACCTGC 2 cut(s) 448, 941
BfuI GTATCC 1 cut(s) 145
BisI GCNGC 6 cut(s) 47, 78, 276, 332, 371, 1049
BlpI GCTNAGC 2 cut(s) 620, 851
BlsI GCNGC 6 cut(s) 48, 79, 277, 333, 372, 1050
Bme1390I CCNGG 4 cut(s) 34, 68, 165, 177
Bme18I GGWCC 1 cut(s) 897
BmgT120I GGNCC 2 cut(s) 247, 897
BmiI GGNNCC 1 cut(s) 318
BmrFI CCNGG 4 cut(s) 34, 68, 165, 177
BmrI ACTGGG 1 cut(s) 206
BmsI GCATC 1 cut(s) 397
BmuI ACTGGG 1 cut(s) 206
BoxI GACNNNNGTC 2 cut(s) 11, 902
BpiI GAAGAC 2 cut(s) 387, 590
BpmI CTGGAG 3 cut(s) 50, 490, 524
Bpu1102I GCTNAGC 2 cut(s) 620, 851
BpuEI CTTGAG 1 cut(s) 1073
BpuMI CCSGG 1 cut(s) 177
Bsa29I ATCGAT 1 cut(s) 56
BsaBI GATNNNNATC 1 cut(s) 225
BsaJI CCNNGG 3 cut(s) 107, 163, 681
Bsc4I CCNNNNNNNGG 4 cut(s) 39, 73, 637, 964
Bse118I RCCGGY 1 cut(s) 535
Bse1I ACTGG 3 cut(s) 212, 473, 631
Bse3DI GCAATG 2 cut(s) 776, 847
Bse8I GATNNNNATC 1 cut(s) 225
BseBI CCWGG 3 cut(s) 34, 68, 165
BseCI ATCGAT 1 cut(s) 56
BseDI CCNNGG 3 cut(s) 107, 163, 681
BseGI GGATG 3 cut(s) 207, 496, 919
BseJI GATNNNNATC 1 cut(s) 225
BseLI CCNNNNNNNGG 4 cut(s) 39, 73, 637, 964
BseMI GCAATG 2 cut(s) 776, 847
BseMII CTCAG 4 cut(s) 192, 634, 842, 1023
BseNI ACTGG 3 cut(s) 212, 473, 631
BseXI GCAGC 5 cut(s) 58, 64, 262, 318, 357
BseYI CCCAGC 1 cut(s) 249
BsgI GTGCAG 2 cut(s) 63, 879
BshFI GGCC 5 cut(s) 106, 121, 248, 526, 819
BshVI ATCGAT 1 cut(s) 56
BsiSI CCGG 2 cut(s) 177, 536
BslFI GGGAC 1 cut(s) 776
BslI CCNNNNNNNGG 4 cut(s) 39, 73, 637, 964
BsmAI GTCTC 2 cut(s) 468, 478
BsmFI GGGAC 1 cut(s) 776
BsnI GGCC 5 cut(s) 106, 121, 248, 526, 819
Bsp1407I TGTACA 1 cut(s) 429
Bsp143I GATC 2 cut(s) 255, 604
Bsp1720I GCTNAGC 2 cut(s) 620, 851
Bsp19I CCATGG 1 cut(s) 107
BspACI CCGC 2 cut(s) 900, 1049
BspANI GGCC 5 cut(s) 106, 121, 248, 526, 819
BspCNI CTCAG 4 cut(s) 193, 633, 843, 1024
BspDI ATCGAT 1 cut(s) 56
BspLI GGNNCC 1 cut(s) 318
BspMI ACCTGC 2 cut(s) 448, 941
BspPI GGATC 1 cut(s) 612
BsrDI GCAATG 2 cut(s) 776, 847
BsrFI RCCGGY 1 cut(s) 535
BsrGI TGTACA 1 cut(s) 429
BsrI ACTGG 3 cut(s) 212, 473, 631
BssAI RCCGGY 1 cut(s) 535
BssECI CCNNGG 3 cut(s) 107, 163, 681
BssMI GATC 2 cut(s) 255, 604
BssT1I CCWWGG 2 cut(s) 107, 681
Bst2UI CCWGG 3 cut(s) 34, 68, 165
Bst4CI ACNGT 1 cut(s) 701
Bst6I CTCTTC 1 cut(s) 726
BstAUI TGTACA 1 cut(s) 429
BstC8I GCNNGC 3 cut(s) 391, 777, 948
BstDEI CTNAG 4 cut(s) 201, 620, 851, 1032
BstDSI CCRYGG 1 cut(s) 107
BstF5I GGATG 3 cut(s) 207, 496, 919
BstKTI GATC 2 cut(s) 258, 607
BstMAI GTCTC 2 cut(s) 468, 478
BstMBI GATC 2 cut(s) 255, 604
BstMWI GCNNNNNNNGC 4 cut(s) 43, 118, 259, 1054
BstNI CCWGG 3 cut(s) 34, 68, 165
BstNSI RCATGY 1 cut(s) 826
BstPAI GACNNNNGTC 2 cut(s) 11, 902
BstSCI CCNGG 4 cut(s) 32, 66, 163, 175
BstV1I GCAGC 5 cut(s) 58, 64, 262, 318, 357
BstV2I GAAGAC 2 cut(s) 387, 590
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
Bsu15I ATCGAT 1 cut(s) 56
BsuI GTATCC 1 cut(s) 145
BsuRI GGCC 5 cut(s) 106, 121, 248, 526, 819
BsuTUI ATCGAT 1 cut(s) 56
BtgI CCRYGG 1 cut(s) 107
BtsCI GGATG 3 cut(s) 207, 496, 919
BtsI GCAGTG 1 cut(s) 862
BtsIMutI CAGTG 2 cut(s) 706, 862
BveI ACCTGC 2 cut(s) 448, 941
Cac8I GCNNGC 3 cut(s) 391, 777, 948
CaiI CAGNNNCTG 2 cut(s) 275, 1031
Cfr10I RCCGGY 1 cut(s) 535
Cfr13I GGNCC 2 cut(s) 247, 897
ClaI ATCGAT 1 cut(s) 56
Csp6I GTAC 4 cut(s) 237, 430, 461, 1014
CviAII CATG 8 cut(s) 95, 108, 123, 144, 311, 660, 743, 823
CviQI GTAC 4 cut(s) 237, 430, 461, 1014
DdeI CTNAG 4 cut(s) 201, 620, 851, 1032
DpnI GATC 2 cut(s) 257, 606
DpnII GATC 2 cut(s) 255, 604
DrdI GACNNNNNNGTC 1 cut(s) 492
DseDI GACNNNNNNGTC 1 cut(s) 492
EaeI YGGCCR 1 cut(s) 104
Eam1104I CTCTTC 1 cut(s) 726
EarI CTCTTC 1 cut(s) 726
Eco130I CCWWGG 2 cut(s) 107, 681
Eco47I GGWCC 1 cut(s) 897
Eco57I CTGAAG 2 cut(s) 399, 423
EcoRI GAATTC 1 cut(s) 359
EcoRII CCWGG 3 cut(s) 32, 66, 163
EcoT14I CCWWGG 2 cut(s) 107, 681
EcoT22I ATGCAT 1 cut(s) 802
ErhI CCWWGG 2 cut(s) 107, 681
FaeI CATG 8 cut(s) 98, 111, 126, 147, 314, 663, 746, 826
FalI AAGNNNNNCTT 2 cut(s) 347, 379
FaqI GGGAC 1 cut(s) 776
FatI CATG 8 cut(s) 94, 107, 122, 143, 310, 659, 742, 822
FbaI TGATCA 1 cut(s) 255
FblI GTMKAC 1 cut(s) 635
Fnu4HI GCNGC 6 cut(s) 47, 78, 276, 332, 371, 1049
FokI GGATG 3 cut(s) 194, 483, 906
Fsp4HI GCNGC 6 cut(s) 47, 78, 276, 332, 371, 1049
FspBI CTAG 6 cut(s) 50, 171, 411, 540, 927, 959
GluI GCNGC 6 cut(s) 47, 78, 276, 332, 371, 1049
GsaI CCCAGC 1 cut(s) 253
GsuI CTGGAG 3 cut(s) 50, 490, 524
HaeIII GGCC 5 cut(s) 106, 121, 248, 526, 819
HapII CCGG 2 cut(s) 177, 536
Hin1II CATG 8 cut(s) 98, 111, 126, 147, 314, 663, 746, 826
HincII GTYRAC 1 cut(s) 636
HindII GTYRAC 1 cut(s) 636
HindIII AAGCTT 3 cut(s) 391, 673, 987
HinfI GANTC 1 cut(s) 53
HpaII CCGG 2 cut(s) 177, 536
HphI GGTGA 3 cut(s) 7, 589, 898
Hpy166II GTNNAC 3 cut(s) 432, 636, 709
Hpy188I TCNGA 3 cut(s) 202, 379, 403
Hpy188III TCNNGA 6 cut(s) 320, 503, 548, 602, 665, 757
Hpy8I GTNNAC 3 cut(s) 432, 636, 709
Hpy99I CGWCG 1 cut(s) 640
HpyAV CCTTC 2 cut(s) 384, 933
HpyCH4III ACNGT 1 cut(s) 701
HpyCH4V TGCA 8 cut(s) 46, 80, 187, 334, 423, 800, 860, 950
HpyF10VI GCNNNNNNNGC 4 cut(s) 43, 118, 259, 1054
HpyF3I CTNAG 4 cut(s) 201, 620, 851, 1032
Hsp92II CATG 8 cut(s) 98, 111, 126, 147, 314, 663, 746, 826
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 2 cut(s) 255, 604
LmnI GCTCC 1 cut(s) 454
Lsp1109I GCAGC 5 cut(s) 58, 64, 262, 318, 357
LweI GCATC 1 cut(s) 397
MaeI CTAG 6 cut(s) 50, 171, 411, 540, 927, 959
MaeIII GTNAC 6 cut(s) 13, 22, 563, 825, 874, 904
MalI GATC 2 cut(s) 257, 606
MboI GATC 2 cut(s) 255, 604
MboII GAAGA 5 cut(s) 392, 416, 590, 713, 716
MflI RGATCY 1 cut(s) 604
MlsI TGGCCA 1 cut(s) 106
MluCI AATT 7 cut(s) 86, 139, 264, 284, 325, 359, 646
MluNI TGGCCA 1 cut(s) 106
Mox20I TGGCCA 1 cut(s) 106
Mph1103I ATGCAT 1 cut(s) 802
MroXI GAANNNNTTC 1 cut(s) 738
MscI TGGCCA 1 cut(s) 106
MseI TTAA 4 cut(s) 89, 306, 810, 1075
MslI CAYNNNNRTG 1 cut(s) 702
Msp20I TGGCCA 1 cut(s) 106
MspA1I CMGCKG 2 cut(s) 253, 301
MspI CCGG 2 cut(s) 177, 536
MspR9I CCNGG 4 cut(s) 34, 68, 165, 177
MvaI CCWGG 3 cut(s) 34, 68, 165
MwoI GCNNNNNNNGC 4 cut(s) 43, 118, 259, 1054
NciI CCSGG 1 cut(s) 177
NcoI CCATGG 1 cut(s) 107
NdeII GATC 2 cut(s) 255, 604
NlaIII CATG 8 cut(s) 98, 111, 126, 147, 314, 663, 746, 826
NlaIV GGNNCC 1 cut(s) 318
NmuCI GTSAC 4 cut(s) 13, 22, 874, 904
NsiI ATGCAT 1 cut(s) 802
NspI RCATGY 1 cut(s) 826
PaqCI CACCTGC 1 cut(s) 941
PciI ACATGT 1 cut(s) 822
PdmI GAANNNNTTC 1 cut(s) 738
PfeI GAWTC 1 cut(s) 53
PfoI TCCNGGA 1 cut(s) 66
PkrI GCNGC 6 cut(s) 48, 79, 277, 333, 372, 1050
PscI ACATGT 1 cut(s) 822
PshAI GACNNNNGTC 2 cut(s) 11, 902
PshBI ATTAAT 1 cut(s) 306
Psp6I CCWGG 3 cut(s) 32, 66, 163
PspFI CCCAGC 1 cut(s) 249
PspGI CCWGG 3 cut(s) 32, 66, 163
PspN4I GGNNCC 1 cut(s) 318
PspPI GGNCC 2 cut(s) 247, 897
PstNI CAGNNNCTG 2 cut(s) 275, 1031
PsuI RGATCY 1 cut(s) 604
PvuII CAGCTG 2 cut(s) 253, 301
RsaI GTAC 4 cut(s) 238, 431, 462, 1015
RsaNI GTAC 4 cut(s) 237, 430, 461, 1014
RseI CAYNNNNRTG 1 cut(s) 702
SalI GTCGAC 1 cut(s) 634
SaqAI TTAA 4 cut(s) 89, 306, 810, 1075
SatI GCNGC 6 cut(s) 47, 78, 276, 332, 371, 1049
Sau3AI GATC 2 cut(s) 255, 604
Sau96I GGNCC 2 cut(s) 247, 897
ScrFI CCNGG 4 cut(s) 34, 68, 165, 177
SfaNI GCATC 1 cut(s) 397
SinI GGWCC 1 cut(s) 897
SmiMI CAYNNNNRTG 1 cut(s) 702
SmlI CTYRAG 1 cut(s) 1052
SmoI CTYRAG 1 cut(s) 1052
Sse9I AATT 7 cut(s) 86, 139, 264, 284, 325, 359, 646
SsiI CCGC 2 cut(s) 900, 1049
SspMI CTAG 6 cut(s) 50, 171, 411, 540, 927, 959
StyD4I CCNGG 4 cut(s) 32, 66, 163, 175
StyI CCWWGG 2 cut(s) 107, 681
TaaI ACNGT 1 cut(s) 701
TaqI TCGA 3 cut(s) 56, 547, 635
TasI AATT 7 cut(s) 86, 139, 264, 284, 325, 359, 646
TatI WGTACW 1 cut(s) 429
TauI GCSGC 1 cut(s) 1051
TfiI GAWTC 1 cut(s) 53
Tru1I TTAA 4 cut(s) 89, 306, 810, 1075
Tru9I TTAA 4 cut(s) 89, 306, 810, 1075
TscAI CASTG 2 cut(s) 706, 862
TseFI GTSAC 4 cut(s) 13, 22, 874, 904
TseI GCWGC 5 cut(s) 46, 77, 275, 331, 370
Tsp45I GTSAC 4 cut(s) 13, 22, 874, 904
TspDTI ATGAA 3 cut(s) 132, 359, 731
TspRI CASTG 2 cut(s) 706, 862
VpaK11BI GGWCC 1 cut(s) 897
VspI ATTAAT 1 cut(s) 306
XapI RAATTY 3 cut(s) 284, 359, 646
XceI RCATGY 1 cut(s) 826
XcmI CCANNNNNNNNNTGG 1 cut(s) 802
XmiI GTMKAC 1 cut(s) 635
XmnI GAANNNNTTC 1 cut(s) 738
XspI CTAG 6 cut(s) 50, 171, 411, 540, 927, 959
Zsp2I ATGCAT 1 cut(s) 802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.