Rorug06G0490400

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000429
Physical Location & Seq
Forward (+)
60851436 .. 60858455
7020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0490400.1

Sequence Viewer

Length: 2061 bp
ATGGTTTATGTCTGTGTCATTTCACTCATAGCTCAATTTCACAAGAACAACAATTGTACTGATTGCAATTATGATTTCTCACTTTTGCCTACTCCTTTCTCTATTGACAGTCTTCGGATCTTTTCCATTGCTGCCATCACATGTGTTTTTATAGTGCTTCCAGTGAATTATCGAGGAAAAGTGCTTGGCCACAAGCGTATCCCTTTAGAAACATTGGAAGTATTTACCATCTTGAATGTTCAAGAGGGTTCAAAGTGGCTCTGGACCCATTGTCTCGCATTGTATGTTATTACATTTTCAGCTTGCGTTCTCCTTTATGTCGAGTATAAGAGGATCACTAAAATGAGACTGGCACATATTACTGGATCTCCTTTAAATCCAAGTCATTTTACAGTTGTTGTTCGTGCTATTCCCTGGTCTCCGGAAGAATCCTACTGTGATTCAGTTAGAAAATTCTTCATGAGGTATCATGAGTCAAGCTACTTGTCTCACCAAATGGTGTACCGATCTGGTAGAGTTCAGAAACTGATGAGCAATGCACGGAAGATGTGCAAGATCTTGAAGGATGTTTCTATTGAACAAAAGCATAAACCAGGCTTATATCATTGTGGTTTTTGTGGAGCACATTCTGATTCTTTTAAGATTCTCTCACATGAATCAGAAAGTGCTAGAGGGAAGTCATTCCTTATTGACGATGGTTATGGTGGAAAGAGAAAAAAGGTGTGTGCTGCTGCTTTTGTCTTTTTCAAGACTCGCTATGCTGCTGTTGTTACTTCACAGGTTCTTCACTCATCAAATCCCATGCAATGGGTGACACAGTTGGCTCCAGAGCCACATGATGTCTACTGGTCAAACCTTTGGATACCATATGGACAATTGTGGATCCGTAAGATAGCTACACTTGTGGCTGCTGTTGCCTTTATGCTTGTGTTTCTTCTTCCTGTCACAATCGTTCAAGGAATGACGCACGCAGATAAGCTACAAAAAACAATACCGTTTCTGGAAGGTCCTCTTAAGAGGAAATTTATAAGCCAGCTGCTGACGGGTTACCTACCAAGTGTGGTTTTAATTGTGGCTTTTTATACAGTTCCACCAATTATGATGCTTATTTCAACACTGGAGGGTTCTATCTCCCGCAGTGGGAGGAAAAAGAGTGCATGCTTCAAAATCTTATACTTCACTATCTGGAATGTCTTTGTTATGAATGTCTTTACTGGGACTGTCATGGATACAGTCGGTATAATTAATAAACTCGATAGTGTGAAAGGCCTACCTGCCCAACTTGCAAGTGCAATTCCTGCACAGGCTAAATTCTTCATGACTTATGTTTTATCATCTGGTTGGGCGGGCTTGGCATGTGAACTCATGCAGCTTTATCCTCTTCTTTGCAACTTTATCCGAAGATATATATTCAGAATGAAAGATTGGGCTATTGGCACAATGTCTTTTCCATATCATACAGAAATTCCTAGACTCCTGCTGTTTGGGTTCATTGGCTTCACTTGTTCCATCATGGTTCCCCTAATATTGCCATTCTTGCTGGTTTACTTCACACTTGCTTACTTTATATATCGAAACCAGATGATCAATGTATATATAACAAAATATGAAACCGGGGGACATTTCTGGCCTTTGGTTCACAATACAGTAATTTTCTCATTGGTTATGATGCAAATAATTGCTCTCGGTGTCTTTGGATTAAGACAATCACCAGTTTCATCAGGGTTCACTATTCCACTGGTTATTTTCACTTTTTTGTTTAATCAGTACTGTCGACAGCGATTTCTTCCAGTATTCAAGAACCATGTTGCAGAGATTCTCATTGACATGGATCGGGAAGATGACAAATATGGGAGGACTGAAGAGACTCATCAACAGTTGCATGCAGCCTATTGCCAGTCCCCTTCAACTTCTCCTGACTCGAGTATGACAGGCTCATATCATCACCAGGAAGAAGACAGCATTCAGGATCCAGAGAATGTGACACCAGGAAAGGAAGCCAGCCAAGTAAGTCCATCATGGTCCATTGCTAGCACATTTGGTGCCCCAGAGCCAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

686

Amino Acids

78.05

Weight (kDa)

9.11

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 38 - 107 2.2e-12 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 129 - 285 4e-27 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 296 - 565 7.9e-70 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000429)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11330 FvH4_2g11330 FvH4_2g21630 FvH4_2g21630 FvH4_2g21630 FvH4_2g21630 FvH4_2g21772 FvH4_2g21772 FvH4_2g21773 FvH4_2g21774
malus_domestica MD05G1199100.v1.1 MD05G1200000.v1.1 MD05G1201900.v1.1 MD10G1188800.v1.1 MD10G1189600.v1.1 MD10G1189900.v1.1 MD15G1001500.v1.1
prunus_persica Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.1G354100_v2.0.a1 Prupe.8G224200_v2.0.a1 Prupe.8G225800_v2.0.a1
pyrus_communis pycom05g18530 pycom05g18630 pycom05g18650 pycom05g18870 pycom15g00070
rosa_chinensis RchiOBHm_Chr4g0407601 RchiOBHm_Chr6g0288311 RchiOBHm_Chr6g0288451 RchiOBHm_Chr6g0288461 RchiOBHm_Chr6g0288471 RchiOBHm_Chr6g0288491 RchiOBHm_Chr6g0288511 RchiOBHm_Chr6g0288521 RchiOBHm_Chr7g0188451
rosa_laevigata RLG00000004695 RLG00000008705 RLG00000010120 RLG00000012396 RLG00000012402 RLG00000012416 RLG00000017369
rosa_multiflora Rmu_co8451481.1_g000001 Rmu_co8483209.1_g000001 Rmu_sc0000952.1_g000001 Rmu_sc0001038.1_g000007 Rmu_sc0004806.1_g000002 Rmu_sc0006439.1_g000001 Rmu_sc0011657.1_g000015
rosa_roxburghii Rroxscaffold_3G00266420 Rroxscaffold_5G00334150 Rroxscaffold_5G00352210 Rroxscaffold_7G00180010 Rroxscaffold_7G00180020 Rroxscaffold_7G00180030 Rroxscaffold_7G00180040 Rroxscaffold_7G00180180
rosa_rugosa Rorug04G0080800 Rorug05G0399800 Rorug06G0195400 Rorug06G0195400 Rorug06G0195600 Rorug06G0196500 Rorug06G0196600 Rorug06G0490400
rosa_samantha Rh2BG181900 Rh2DG180700 Rh4AG145500 Rh4BG143300 Rh4CG152200 Rh6AG306700 Rh6AG308200 Rh6AG308300 Rh6AG308500 Rh6AG308600 Rh6BG312500 Rh6BG313400 Rh6BG313800 Rh6BG313900 Rh6CG321300 Rh6DG305500 Rh6DG306700 Rh6DG306800 Rh6DG306900 Rh6DG307100 Rh7AG095200 Rh7BG096700 Rh7CG097500
rosa_wichuraiana Rw4G011820 Rw6G026520 Rw6G026640 Rw6G026650 Rw7G008210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1028
Acc36I ACCTGC 1 cut(s) 1282
AccB1I GGYRCC 1 cut(s) 2042
AccB7I CCANNNNNTGG 1 cut(s) 807
AccI GTMKAC 2 cut(s) 843, 1774
AccIII TCCGGA 1 cut(s) 421
AciI CCGC 2 cut(s) 1135, 1346
AclWI GGATC 8 cut(s) 125, 341, 373, 877, 890, 1839, 1964, 1977
AcoI YGGCCR 1 cut(s) 187
AcsI RAATTY 4 cut(s) 452, 1022, 1310, 1464
AcuI CTGAAG 1 cut(s) 1881
AfaI GTAC 3 cut(s) 58, 503, 1769
AfiI CCNNNNNNNGG 2 cut(s) 807, 1140
AflII CTTAAG 1 cut(s) 1013
AflIII ACRYGT 1 cut(s) 140
AhdI GACNNNNNGTC 1 cut(s) 270
AjnI CCWGG 4 cut(s) 413, 592, 1947, 1987
AjuI GAANNNNNNNTTGG 2 cut(s) 1408, 1440
AluBI AGCT 7 cut(s) 32, 302, 480, 896, 979, 1036, 1372
AluI AGCT 7 cut(s) 32, 302, 480, 896, 979, 1036, 1372
Alw21I GWGCWC 1 cut(s) 625
Alw26I GTCTC 5 cut(s) 278, 340, 423, 492, 1859
AlwI GGATC 8 cut(s) 125, 341, 373, 877, 890, 1839, 1964, 1977
AlwNI CAGNNNCTG 2 cut(s) 526, 1039
Ama87I CYCGRG 1 cut(s) 1921
Aor13HI TCCGGA 1 cut(s) 421
AoxI GGCC 3 cut(s) 187, 1267, 1628
ApeKI GCWGC 8 cut(s) 131, 728, 731, 761, 908, 1036, 1369, 1886
ApoI RAATTY 4 cut(s) 452, 1022, 1310, 1464
AseI ATTAAT 1 cut(s) 1245
Asp700I GAANNNNTTC 1 cut(s) 680
AspS9I GGNCC 3 cut(s) 264, 1007, 2022
AsuC2I CCSGG 1 cut(s) 1615
AsuHPI GGTGA 4 cut(s) 482, 823, 1701, 1937
AsuNHI GCTAGC 1 cut(s) 2030
AvaI CYCGRG 1 cut(s) 1921
AvaII GGWCC 3 cut(s) 264, 1007, 2022
BaeGI GKGCMC 1 cut(s) 2047
BaeI ACNNNNGTAYC 2 cut(s) 181, 214
BalI TGGCCA 1 cut(s) 189
BamHI GGATCC 2 cut(s) 882, 1969
BanI GGYRCC 1 cut(s) 2042
BbsI GAAGAC 2 cut(s) 104, 1962
Bbv12I GWGCWC 1 cut(s) 625
BbvI GCAGC 8 cut(s) 118, 715, 718, 748, 895, 1023, 1381, 1898
BccI CCATC 5 cut(s) 143, 236, 689, 1517, 2023
BciT130I CCWGG 4 cut(s) 415, 594, 1949, 1989
BciVI GTATCC 3 cut(s) 209, 855, 1222
BclI TGATCA 1 cut(s) 1584
BcnI CCSGG 1 cut(s) 1615
BcoDI GTCTC 5 cut(s) 278, 340, 423, 492, 1859
BfaI CTAG 3 cut(s) 669, 1470, 2031
BfrI CTTAAG 1 cut(s) 1013
BfuAI ACCTGC 1 cut(s) 1282
BfuI GTATCC 3 cut(s) 209, 855, 1222
BglII AGATCT 1 cut(s) 555
BisI GCNGC 8 cut(s) 132, 729, 732, 762, 909, 1037, 1370, 1887
BlsI GCNGC 8 cut(s) 133, 730, 733, 763, 910, 1038, 1371, 1888
BmcAI AGTACT 1 cut(s) 1769
Bme1390I CCNGG 5 cut(s) 415, 594, 1615, 1949, 1989
Bme18I GGWCC 3 cut(s) 264, 1007, 2022
BmeRI GACNNNNNGTC 1 cut(s) 270
BmeT110I CYCGRG 1 cut(s) 1921
BmgT120I GGNCC 3 cut(s) 264, 1007, 2022
BmiI GGNNCC 6 cut(s) 266, 825, 884, 1518, 1971, 2044
BmrFI CCNGG 5 cut(s) 415, 594, 1615, 1949, 1989
BmrI ACTGGG 1 cut(s) 1224
BmsI GCATC 2 cut(s) 1092, 1659
BmtI GCTAGC 1 cut(s) 2034
BmuI ACTGGG 1 cut(s) 1224
BpiI GAAGAC 2 cut(s) 104, 1962
BpmI CTGGAG 2 cut(s) 810, 1139
BpuMI CCSGG 1 cut(s) 1615
BsaI GGTCTC 1 cut(s) 423
BsaJI CCNNGG 2 cut(s) 413, 1614
BsaWI WCCGGW 1 cut(s) 421
BsaXI ACNNNNNCTCC 2 cut(s) 352, 382
Bsc4I CCNNNNNNNGG 2 cut(s) 807, 1140
Bse3DI GCAATG 4 cut(s) 126, 541, 812, 2025
BseAI TCCGGA 1 cut(s) 421
BseBI CCWGG 4 cut(s) 415, 594, 1949, 1989
BseDI CCNNGG 2 cut(s) 413, 1614
BseGI GGATG 1 cut(s) 571
BseLI CCNNNNNNNGG 2 cut(s) 807, 1140
BseMI GCAATG 4 cut(s) 126, 541, 812, 2025
BseSI GKGCMC 1 cut(s) 2047
BseXI GCAGC 8 cut(s) 118, 715, 718, 748, 895, 1023, 1381, 1898
BsgI GTGCAG 1 cut(s) 1284
BshFI GGCC 3 cut(s) 189, 1269, 1630
BshNI GGYRCC 1 cut(s) 2042
BsiHKAI GWGCWC 1 cut(s) 625
BsiHKCI CYCGRG 1 cut(s) 1921
BsiSI CCGG 2 cut(s) 422, 1614
BslFI GGGAC 3 cut(s) 1231, 1632, 1885
BslI CCNNNNNNNGG 2 cut(s) 807, 1140
BsmAI GTCTC 5 cut(s) 278, 340, 423, 492, 1859
BsmFI GGGAC 3 cut(s) 1231, 1632, 1885
BsmI GAATGC 1 cut(s) 1962
BsnI GGCC 3 cut(s) 189, 1269, 1630
Bso31I GGTCTC 1 cut(s) 423
BsoBI CYCGRG 1 cut(s) 1921
Bsp1286I GDGCHC 2 cut(s) 625, 2047
Bsp13I TCCGGA 1 cut(s) 421
Bsp143I GATC 9 cut(s) 117, 333, 365, 506, 555, 882, 1584, 1831, 1969
BspACI CCGC 2 cut(s) 1135, 1346
BspANI GGCC 3 cut(s) 189, 1269, 1630
BspEI TCCGGA 1 cut(s) 421
BspHI TCATGA 3 cut(s) 459, 469, 1317
BspLI GGNNCC 6 cut(s) 266, 825, 884, 1518, 1971, 2044
BspMI ACCTGC 1 cut(s) 1282
BspOI GCTAGC 1 cut(s) 2034
BspPI GGATC 8 cut(s) 125, 341, 373, 877, 890, 1839, 1964, 1977
BspT107I GGYRCC 1 cut(s) 2042
BspTI CTTAAG 1 cut(s) 1013
BspTNI GGTCTC 1 cut(s) 423
BsrDI GCAATG 4 cut(s) 126, 541, 812, 2025
BssECI CCNNGG 2 cut(s) 413, 1614
BssMI GATC 9 cut(s) 117, 333, 365, 506, 555, 882, 1584, 1831, 1969
Bst2UI CCWGG 4 cut(s) 415, 594, 1949, 1989
Bst6I CTCTTC 2 cut(s) 1386, 1857
BstAFI CTTAAG 1 cut(s) 1013
BstAPI GCANNNNNTGC 1 cut(s) 1298
BstC8I GCNNGC 8 cut(s) 304, 969, 1034, 1159, 1348, 1884, 2002, 2032
BstEII GGTNACC 1 cut(s) 1046
BstF5I GGATG 1 cut(s) 571
BstKTI GATC 9 cut(s) 120, 336, 368, 509, 558, 885, 1587, 1834, 1972
BstMAI GTCTC 5 cut(s) 278, 340, 423, 492, 1859
BstMBI GATC 9 cut(s) 117, 333, 365, 506, 555, 882, 1584, 1831, 1969
BstMWI GCNNNNNNNGC 5 cut(s) 914, 1283, 1298, 1352, 1537
BstNI CCWGG 4 cut(s) 415, 594, 1949, 1989
BstNSI RCATGY 4 cut(s) 144, 1161, 1359, 1886
BstPI GGTNACC 1 cut(s) 1046
BstSCI CCNGG 5 cut(s) 413, 592, 1613, 1947, 1987
BstSLI GKGCMC 1 cut(s) 2047
BstV1I GCAGC 8 cut(s) 118, 715, 718, 748, 895, 1023, 1381, 1898
BstV2I GAAGAC 2 cut(s) 104, 1962
BstX2I RGATCY 5 cut(s) 117, 365, 555, 882, 1969
BstYI RGATCY 5 cut(s) 117, 365, 555, 882, 1969
BsuI GTATCC 3 cut(s) 209, 855, 1222
BsuRI GGCC 3 cut(s) 189, 1269, 1630
BtsCI GGATG 1 cut(s) 571
BtsI GCAGTG 1 cut(s) 1144
BtsIMutI CAGTG 4 cut(s) 168, 1115, 1144, 1736
BveI ACCTGC 1 cut(s) 1282
Cac8I GCNNGC 8 cut(s) 304, 969, 1034, 1159, 1348, 1884, 2002, 2032
CaiI CAGNNNCTG 2 cut(s) 526, 1039
CciI TCATGA 3 cut(s) 459, 469, 1317
Cfr13I GGNCC 3 cut(s) 264, 1007, 2022
CseI GACGC 1 cut(s) 973
Csp6I GTAC 3 cut(s) 57, 502, 1768
CviQI GTAC 3 cut(s) 57, 502, 1768
DpnI GATC 9 cut(s) 119, 335, 367, 508, 557, 884, 1586, 1833, 1971
DpnII GATC 9 cut(s) 117, 333, 365, 506, 555, 882, 1584, 1831, 1969
DraI TTTAAA 1 cut(s) 375
DriI GACNNNNNGTC 1 cut(s) 270
EaeI YGGCCR 1 cut(s) 187
Eam1104I CTCTTC 2 cut(s) 1386, 1857
Eam1105I GACNNNNNGTC 1 cut(s) 270
EarI CTCTTC 2 cut(s) 1386, 1857
Eco147I AGGCCT 1 cut(s) 1269
Eco31I GGTCTC 1 cut(s) 423
Eco47I GGWCC 3 cut(s) 264, 1007, 2022
Eco57I CTGAAG 1 cut(s) 1881
Eco88I CYCGRG 1 cut(s) 1921
Eco91I GGTNACC 1 cut(s) 1046
EcoO109I RGGNCCY 1 cut(s) 1007
EcoO65I GGTNACC 1 cut(s) 1046
EcoRII CCWGG 4 cut(s) 413, 592, 1947, 1987
FalI AAGNNNNNCTT 2 cut(s) 996, 1028
FaqI GGGAC 3 cut(s) 1231, 1632, 1885
FauI CCCGC 2 cut(s) 1142, 1339
FauNDI CATATG 1 cut(s) 868
FbaI TGATCA 1 cut(s) 1584
FblI GTMKAC 2 cut(s) 843, 1774
Fnu4HI GCNGC 8 cut(s) 132, 729, 732, 762, 909, 1037, 1370, 1887
FokI GGATG 1 cut(s) 578
Fsp4HI GCNGC 8 cut(s) 132, 729, 732, 762, 909, 1037, 1370, 1887
FspBI CTAG 3 cut(s) 669, 1470, 2031
GluI GCNGC 8 cut(s) 132, 729, 732, 762, 909, 1037, 1370, 1887
GsuI CTGGAG 2 cut(s) 810, 1139
HaeIII GGCC 3 cut(s) 189, 1269, 1630
HapII CCGG 2 cut(s) 422, 1614
HgaI GACGC 1 cut(s) 973
HincII GTYRAC 1 cut(s) 1775
HindII GTYRAC 1 cut(s) 1775
HpaII CCGG 2 cut(s) 422, 1614
HphI GGTGA 4 cut(s) 482, 823, 1701, 1937
Hpy166II GTNNAC 7 cut(s) 502, 844, 1361, 1546, 1639, 1728, 1775
Hpy188I TCNGA 6 cut(s) 117, 522, 631, 661, 1400, 1415
Hpy8I GTNNAC 7 cut(s) 502, 844, 1361, 1546, 1639, 1728, 1775
HpyAV CCTTC 3 cut(s) 556, 998, 1914
HpyF10VI GCNNNNNNNGC 5 cut(s) 914, 1283, 1298, 1352, 1537
Kpn2I TCCGGA 1 cut(s) 421
Ksp22I TGATCA 1 cut(s) 1584
Kzo9I GATC 9 cut(s) 117, 333, 365, 506, 555, 882, 1584, 1831, 1969
LmnI GCTCC 2 cut(s) 620, 829
Lsp1109I GCAGC 8 cut(s) 118, 715, 718, 748, 895, 1023, 1381, 1898
LweI GCATC 2 cut(s) 1092, 1659
MaeI CTAG 3 cut(s) 669, 1470, 2031
MaeIII GTNAC 5 cut(s) 769, 811, 943, 1046, 1981
MalI GATC 9 cut(s) 119, 335, 367, 508, 557, 884, 1586, 1833, 1971
MboI GATC 9 cut(s) 117, 333, 365, 506, 555, 882, 1584, 1831, 1969
MfeI CAATTG 2 cut(s) 52, 875
MflI RGATCY 5 cut(s) 117, 365, 555, 882, 1969
MhlI GDGCHC 2 cut(s) 625, 2047
MlsI TGGCCA 1 cut(s) 189
MluNI TGGCCA 1 cut(s) 189
MlyI GAGTC 5 cut(s) 482, 745, 1467, 1861, 1913
Mox20I TGGCCA 1 cut(s) 189
MroI TCCGGA 1 cut(s) 421
MroXI GAANNNNTTC 1 cut(s) 680
MscI TGGCCA 1 cut(s) 189
MseI TTAA 7 cut(s) 374, 639, 1014, 1067, 1245, 1700, 1761
MslI CAYNNNNRTG 2 cut(s) 341, 1826
Msp20I TGGCCA 1 cut(s) 189
MspA1I CMGCKG 1 cut(s) 1036
MspCI CTTAAG 1 cut(s) 1013
MspI CCGG 2 cut(s) 422, 1614
MspR9I CCNGG 5 cut(s) 415, 594, 1615, 1949, 1989
MunI CAATTG 2 cut(s) 52, 875
Mva1269I GAATGC 1 cut(s) 1962
MvaI CCWGG 4 cut(s) 415, 594, 1949, 1989
MwoI GCNNNNNNNGC 5 cut(s) 914, 1283, 1298, 1352, 1537
NciI CCSGG 1 cut(s) 1615
NdeI CATATG 1 cut(s) 868
NdeII GATC 9 cut(s) 117, 333, 365, 506, 555, 882, 1584, 1831, 1969
NheI GCTAGC 1 cut(s) 2030
NlaIV GGNNCC 6 cut(s) 266, 825, 884, 1518, 1971, 2044
NmuCI GTSAC 3 cut(s) 811, 943, 1981
NspI RCATGY 4 cut(s) 144, 1161, 1359, 1886
PaeI GCATGC 2 cut(s) 1161, 1886
PaeR7I CTCGAG 1 cut(s) 1921
PagI TCATGA 3 cut(s) 459, 469, 1317
PceI AGGCCT 1 cut(s) 1269
PciI ACATGT 1 cut(s) 140
PctI GAATGC 1 cut(s) 1962
PdmI GAANNNNTTC 1 cut(s) 680
PfeI GAWTC 6 cut(s) 428, 440, 632, 643, 656, 1816
PflMI CCANNNNNTGG 1 cut(s) 807
PkrI GCNGC 8 cut(s) 133, 730, 733, 763, 910, 1038, 1371, 1888
PleI GAGTC 5 cut(s) 481, 745, 1467, 1861, 1913
PpsI GAGTC 5 cut(s) 481, 745, 1467, 1861, 1913
PpuMI RGGWCCY 1 cut(s) 1007
PscI ACATGT 1 cut(s) 140
PshBI ATTAAT 1 cut(s) 1245
PsiI TTATAA 1 cut(s) 1028
Psp5II RGGWCCY 1 cut(s) 1007
Psp6I CCWGG 4 cut(s) 413, 592, 1947, 1987
PspEI GGTNACC 1 cut(s) 1046
PspGI CCWGG 4 cut(s) 413, 592, 1947, 1987
PspN4I GGNNCC 6 cut(s) 266, 825, 884, 1518, 1971, 2044
PspPI GGNCC 3 cut(s) 264, 1007, 2022
PspPPI RGGWCCY 1 cut(s) 1007
PspXI VCTCGAGB 1 cut(s) 1921
PstNI CAGNNNCTG 2 cut(s) 526, 1039
PsuI RGATCY 5 cut(s) 117, 365, 555, 882, 1969
PvuII CAGCTG 1 cut(s) 1036
RsaI GTAC 3 cut(s) 58, 503, 1769
RsaNI GTAC 3 cut(s) 57, 502, 1768
RseI CAYNNNNRTG 2 cut(s) 341, 1826
SalI GTCGAC 1 cut(s) 1773
SaqAI TTAA 7 cut(s) 374, 639, 1014, 1067, 1245, 1700, 1761
SatI GCNGC 8 cut(s) 132, 729, 732, 762, 909, 1037, 1370, 1887
Sau3AI GATC 9 cut(s) 117, 333, 365, 506, 555, 882, 1584, 1831, 1969
Sau96I GGNCC 3 cut(s) 264, 1007, 2022
ScaI AGTACT 1 cut(s) 1769
SchI GAGTC 5 cut(s) 482, 745, 1467, 1861, 1913
ScrFI CCNGG 5 cut(s) 415, 594, 1615, 1949, 1989
SduI GDGCHC 2 cut(s) 625, 2047
SfaNI GCATC 2 cut(s) 1092, 1659
Sfr274I CTCGAG 1 cut(s) 1921
SinI GGWCC 3 cut(s) 264, 1007, 2022
SlaI CTCGAG 1 cut(s) 1921
SmiMI CAYNNNNRTG 2 cut(s) 341, 1826
SmlI CTYRAG 2 cut(s) 1013, 1921
SmoI CTYRAG 2 cut(s) 1013, 1921
SphI GCATGC 2 cut(s) 1161, 1886
SseBI AGGCCT 1 cut(s) 1269
SsiI CCGC 2 cut(s) 1135, 1346
SspI AATATT 1 cut(s) 1527
SspMI CTAG 3 cut(s) 669, 1470, 2031
StuI AGGCCT 1 cut(s) 1269
StyD4I CCNGG 5 cut(s) 413, 592, 1613, 1947, 1987
TaqI TCGA 6 cut(s) 172, 321, 1254, 1573, 1774, 1922
TatI WGTACW 2 cut(s) 56, 1767
TfiI GAWTC 6 cut(s) 428, 440, 632, 643, 656, 1816
Tru1I TTAA 7 cut(s) 374, 639, 1014, 1067, 1245, 1700, 1761
Tru9I TTAA 7 cut(s) 374, 639, 1014, 1067, 1245, 1700, 1761
TscAI CASTG 4 cut(s) 168, 1122, 1144, 1743
TseFI GTSAC 3 cut(s) 811, 943, 1981
TseI GCWGC 8 cut(s) 131, 728, 731, 761, 908, 1036, 1369, 1886
Tsp45I GTSAC 3 cut(s) 811, 943, 1981
TspDTI ATGAA 8 cut(s) 448, 669, 1217, 1306, 1433, 1480, 1623, 1707
TspGWI ACGGA 2 cut(s) 556, 875
TspRI CASTG 4 cut(s) 168, 1122, 1144, 1743
Van91I CCANNNNNTGG 1 cut(s) 807
Vha464I CTTAAG 1 cut(s) 1013
VpaK11BI GGWCC 3 cut(s) 264, 1007, 2022
VspI ATTAAT 1 cut(s) 1245
XapI RAATTY 4 cut(s) 452, 1022, 1310, 1464
XceI RCATGY 4 cut(s) 144, 1161, 1359, 1886
XhoI CTCGAG 1 cut(s) 1921
XmiI GTMKAC 2 cut(s) 843, 1774
XmnI GAANNNNTTC 1 cut(s) 680
XspI CTAG 3 cut(s) 669, 1470, 2031
ZrmI AGTACT 1 cut(s) 1769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.