Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G18130 |
| fragaria_vesca | FvH4_1g06850 FvH4_3g06380 |
| malus_domestica | MD05G1291600.v1.1 MD10G1267600.v1.1 |
| prunus_persica | Prupe.4G073900_v2.0.a1 Prupe.4G073900_v2.0.a1 Prupe.4G073900_v2.0.a1 Prupe.4G073900_v2.0.a1 |
| pyrus_communis | pycom05g26810 pycom10g22370 |
| rosa_chinensis | RchiOBHm_Chr5g0012921 |
| rosa_laevigata | RLG00000031969 |
| rosa_multiflora | Rmu_sc0006885.1_g000001 Rmu_sc0016318.1_g000002 Rmu_sc0021373.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00063660 |
| rosa_rugosa | Rorug05G0005200 Rorug05G0005300 |
| rosa_samantha | Rh5AG099500 Rh5BG096100 Rh5CG108400 Rh5DG094800 |
| rosa_wichuraiana | Rw5G008690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 759 |
| AarI | CACCTGC | 1 cut(s) | 2552 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 107, 2418 |
| AatII | GACGTC | 1 cut(s) | 2907 |
| Acc36I | ACCTGC | 1 cut(s) | 2552 |
| AccI | GTMKAC | 1 cut(s) | 2410 |
| AccII | CGCG | 6 cut(s) | 33, 446, 644, 651, 891, 2008 |
| AccIII | TCCGGA | 1 cut(s) | 208 |
| AclI | AACGTT | 1 cut(s) | 2364 |
| AclWI | GGATC | 1 cut(s) | 593 |
| AcoI | YGGCCR | 2 cut(s) | 141, 3163 |
| AcsI | RAATTY | 9 cut(s) | 318, 2083, 2219, 2323, 2438, 2598, 2879, 3090, 3258 |
| AcuI | CTGAAG | 3 cut(s) | 650, 971, 2999 |
| AcyI | GRCGYC | 2 cut(s) | 129, 2904 |
| AfaI | GTAC | 9 cut(s) | 149, 520, 627, 1013, 1343, 1450, 2456, 2749, 3189 |
| AfeI | AGCGCT | 1 cut(s) | 3183 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 502, 682, 847, 1493, 1886, 3166, 3167 |
| AflII | CTTAAG | 1 cut(s) | 2669 |
| AgeI | ACCGGT | 1 cut(s) | 1439 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2617 |
| AjnI | CCWGG | 6 cut(s) | 512, 676, 1606, 2383, 3097, 3165 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1675, 1707 |
| Alw21I | GWGCWC | 3 cut(s) | 1486, 3303, 3383 |
| Alw26I | GTCTC | 7 cut(s) | 169, 675, 993, 1737, 1859, 3239, 3375 |
| Alw44I | GTGCAC | 1 cut(s) | 1482 |
| AlwI | GGATC | 1 cut(s) | 593 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1874, 3361 |
| Ama87I | CYCGRG | 3 cut(s) | 221, 1639, 3236 |
| Aor13HI | TCCGGA | 1 cut(s) | 208 |
| Aor51HI | AGCGCT | 1 cut(s) | 3183 |
| AoxI | GGCC | 5 cut(s) | 141, 621, 2622, 3163, 3169 |
| ApaLI | GTGCAC | 1 cut(s) | 1482 |
| ApoI | RAATTY | 9 cut(s) | 318, 2083, 2219, 2323, 2438, 2598, 2879, 3090, 3258 |
| AseI | ATTAAT | 1 cut(s) | 1710 |
| AsiGI | ACCGGT | 1 cut(s) | 1439 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 720, 2774 |
| AspLEI | GCGC | 4 cut(s) | 35, 653, 2533, 3184 |
| AspS9I | GGNCC | 3 cut(s) | 621, 1560, 3169 |
| AsuC2I | CCSGG | 2 cut(s) | 1479, 3162 |
| AsuHPI | GGTGA | 6 cut(s) | 794, 1057, 1595, 1637, 2060, 3087 |
| AsuII | TTCGAA | 3 cut(s) | 316, 1775, 2663 |
| AvaI | CYCGRG | 3 cut(s) | 221, 1639, 3236 |
| AvaII | GGWCC | 1 cut(s) | 1560 |
| BaeGI | GKGCMC | 1 cut(s) | 1486 |
| BanII | GRGCYC | 1 cut(s) | 1031 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2622, 2654 |
| Bbv12I | GWGCWC | 3 cut(s) | 1486, 3303, 3383 |
| BbvCI | CCTCAGC | 1 cut(s) | 2933 |
| BceAI | ACGGC | 3 cut(s) | 608, 1584, 3136 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 140, 174, 896, 930, 1765, 1799, 3048, 3082 |
| BciT130I | CCWGG | 6 cut(s) | 514, 678, 1608, 2385, 3099, 3167 |
| BclI | TGATCA | 1 cut(s) | 775 |
| BcnI | CCSGG | 2 cut(s) | 1479, 3162 |
| BcoDI | GTCTC | 7 cut(s) | 169, 675, 993, 1737, 1859, 3239, 3375 |
| BfaI | CTAG | 5 cut(s) | 588, 660, 1680, 1979, 2787 |
| BfmI | CTRYAG | 3 cut(s) | 118, 159, 2948 |
| BfoI | RGCGCY | 2 cut(s) | 2534, 3185 |
| BfrI | CTTAAG | 1 cut(s) | 2669 |
| BfuAI | ACCTGC | 1 cut(s) | 2552 |
| BglII | AGATCT | 1 cut(s) | 1698 |
| BlpI | GCTNAGC | 1 cut(s) | 1596 |
| Bme1390I | CCNGG | 8 cut(s) | 514, 678, 1479, 1608, 2385, 3099, 3162, 3167 |
| Bme18I | GGWCC | 1 cut(s) | 1560 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2617 |
| BmeT110I | CYCGRG | 3 cut(s) | 221, 1639, 3236 |
| BmgT120I | GGNCC | 3 cut(s) | 621, 1560, 3169 |
| BmiI | GGNNCC | 3 cut(s) | 582, 622, 1562 |
| BmrFI | CCNGG | 8 cut(s) | 514, 678, 1479, 1608, 2385, 3099, 3162, 3167 |
| BmrI | ACTGGG | 1 cut(s) | 1502 |
| BmsI | GCATC | 6 cut(s) | 1609, 1623, 1786, 1794, 2300, 2548 |
| BmuI | ACTGGG | 1 cut(s) | 1502 |
| BpmI | CTGGAG | 2 cut(s) | 699, 3125 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2933 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1596 |
| Bpu14I | TTCGAA | 3 cut(s) | 316, 1775, 2663 |
| BpuEI | CTTGAG | 2 cut(s) | 843, 1685 |
| BpuMI | CCSGG | 2 cut(s) | 1479, 3162 |
| BsaHI | GRCGYC | 2 cut(s) | 129, 2904 |
| BsaI | GGTCTC | 2 cut(s) | 993, 3239 |
| BsaWI | WCCGGW | 5 cut(s) | 167, 208, 984, 1280, 1439 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1282, 1312 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 502, 682, 847, 1493, 1886, 3166, 3167 |
| Bse118I | RCCGGY | 1 cut(s) | 1439 |
| Bse1I | ACTGG | 6 cut(s) | 739, 923, 1497, 1774, 2350, 3142 |
| Bse3DI | GCAATG | 3 cut(s) | 919, 1504, 2797 |
| BseAI | TCCGGA | 1 cut(s) | 208 |
| BseBI | CCWGG | 6 cut(s) | 514, 678, 1608, 2385, 3099, 3167 |
| BseGI | GGATG | 8 cut(s) | 1277, 1624, 1638, 1716, 1906, 1922, 2223, 2653 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 502, 682, 847, 1493, 1886, 3166, 3167 |
| BseMI | GCAATG | 3 cut(s) | 919, 1504, 2797 |
| BseNI | ACTGG | 6 cut(s) | 739, 923, 1497, 1774, 2350, 3142 |
| BseRI | GAGGAG | 8 cut(s) | 37, 40, 43, 239, 426, 1253, 1605, 2066 |
| BseSI | GKGCMC | 1 cut(s) | 1486 |
| BseYI | CCCAGC | 2 cut(s) | 352, 3075 |
| BsgI | GTGCAG | 1 cut(s) | 3305 |
| Bsh1236I | CGCG | 6 cut(s) | 33, 446, 644, 651, 891, 2008 |
| BshFI | GGCC | 5 cut(s) | 143, 623, 2624, 3165, 3171 |
| BshTI | ACCGGT | 1 cut(s) | 1439 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1486, 3303, 3383 |
| BsiHKCI | CYCGRG | 3 cut(s) | 221, 1639, 3236 |
| BsiSI | CCGG | 8 cut(s) | 168, 209, 985, 1281, 1440, 1479, 3010, 3162 |
| BslFI | GGGAC | 7 cut(s) | 203, 698, 1112, 1366, 1546, 1625, 1960 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 502, 682, 847, 1493, 1886, 3166, 3167 |
| BsmAI | GTCTC | 7 cut(s) | 169, 675, 993, 1737, 1859, 3239, 3375 |
| BsmFI | GGGAC | 7 cut(s) | 203, 698, 1112, 1366, 1546, 1625, 1960 |
| BsmI | GAATGC | 3 cut(s) | 41, 2308, 2660 |
| BsnI | GGCC | 5 cut(s) | 143, 623, 2624, 3165, 3171 |
| Bso31I | GGTCTC | 2 cut(s) | 993, 3239 |
| BsoBI | CYCGRG | 3 cut(s) | 221, 1639, 3236 |
| Bsp119I | TTCGAA | 3 cut(s) | 316, 1775, 2663 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1031, 1486, 3303, 3383 |
| Bsp13I | TCCGGA | 1 cut(s) | 208 |
| Bsp1407I | TGTACA | 1 cut(s) | 3187 |
| Bsp143I | GATC | 6 cut(s) | 598, 775, 900, 1643, 1698, 3001 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1596 |
| Bsp19I | CCATGG | 1 cut(s) | 2331 |
| BspANI | GGCC | 5 cut(s) | 143, 623, 2624, 3165, 3171 |
| BspEI | TCCGGA | 1 cut(s) | 208 |
| BspFNI | CGCG | 6 cut(s) | 33, 446, 644, 651, 891, 2008 |
| BspHI | TCATGA | 4 cut(s) | 1737, 2811, 2959, 3373 |
| BspLI | GGNNCC | 3 cut(s) | 582, 622, 1562 |
| BspMAI | CTGCAG | 2 cut(s) | 163, 2952 |
| BspMI | ACCTGC | 1 cut(s) | 2552 |
| BspPI | GGATC | 1 cut(s) | 593 |
| BspQI | GCTCTTC | 1 cut(s) | 2834 |
| BspT104I | TTCGAA | 3 cut(s) | 316, 1775, 2663 |
| BspTI | CTTAAG | 1 cut(s) | 2669 |
| BspTNI | GGTCTC | 2 cut(s) | 993, 3239 |
| BsrDI | GCAATG | 3 cut(s) | 919, 1504, 2797 |
| BsrFI | RCCGGY | 1 cut(s) | 1439 |
| BsrGI | TGTACA | 1 cut(s) | 3187 |
| BsrI | ACTGG | 6 cut(s) | 739, 923, 1497, 1774, 2350, 3142 |
| BssAI | RCCGGY | 1 cut(s) | 1439 |
| BssMI | GATC | 6 cut(s) | 598, 775, 900, 1643, 1698, 3001 |
| BssNI | GRCGYC | 2 cut(s) | 129, 2904 |
| BssT1I | CCWWGG | 4 cut(s) | 1691, 2331, 2458, 2625 |
| Bst2UI | CCWGG | 6 cut(s) | 514, 678, 1608, 2385, 3099, 3167 |
| Bst4CI | ACNGT | 6 cut(s) | 630, 709, 782, 1011, 1424, 1625 |
| Bst6I | CTCTTC | 2 cut(s) | 1143, 2834 |
| BstACI | GRCGYC | 2 cut(s) | 129, 2904 |
| BstAFI | CTTAAG | 1 cut(s) | 2669 |
| BstAUI | TGTACA | 1 cut(s) | 3187 |
| BstBI | TTCGAA | 3 cut(s) | 316, 1775, 2663 |
| BstDSI | CCRYGG | 4 cut(s) | 444, 846, 1836, 2331 |
| BstEII | GGTNACC | 1 cut(s) | 1472 |
| BstF5I | GGATG | 8 cut(s) | 1277, 1624, 1638, 1716, 1906, 1922, 2223, 2653 |
| BstFNI | CGCG | 6 cut(s) | 33, 446, 644, 651, 891, 2008 |
| BstH2I | RGCGCY | 2 cut(s) | 2534, 3185 |
| BstHHI | GCGC | 4 cut(s) | 35, 653, 2533, 3184 |
| BstKTI | GATC | 6 cut(s) | 601, 778, 903, 1646, 1701, 3004 |
| BstMAI | GTCTC | 7 cut(s) | 169, 675, 993, 1737, 1859, 3239, 3375 |
| BstMBI | GATC | 6 cut(s) | 598, 775, 900, 1643, 1698, 3001 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 650, 1149, 1931, 2098, 2614 |
| BstNI | CCWGG | 6 cut(s) | 514, 678, 1608, 2385, 3099, 3167 |
| BstNSI | RCATGY | 3 cut(s) | 1261, 1359, 2689 |
| BstPI | GGTNACC | 1 cut(s) | 1472 |
| BstSCI | CCNGG | 8 cut(s) | 512, 676, 1477, 1606, 2383, 3097, 3160, 3165 |
| BstSFI | CTRYAG | 3 cut(s) | 118, 159, 2948 |
| BstSLI | GKGCMC | 1 cut(s) | 1486 |
| BstUI | CGCG | 6 cut(s) | 33, 446, 644, 651, 891, 2008 |
| BstX2I | RGATCY | 1 cut(s) | 1698 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 139, 281 |
| BstYI | RGATCY | 1 cut(s) | 1698 |
| BsuRI | GGCC | 5 cut(s) | 143, 623, 2624, 3165, 3171 |
| BtgI | CCRYGG | 4 cut(s) | 444, 846, 1836, 2331 |
| BtgZI | GCGATG | 1 cut(s) | 1979 |
| BtsCI | GGATG | 8 cut(s) | 1277, 1624, 1638, 1716, 1906, 1922, 2223, 2653 |
| BtsI | GCAGTG | 2 cut(s) | 25, 1788 |
| BtsIMutI | CAGTG | 6 cut(s) | 25, 201, 241, 337, 1788, 2473 |
| BveI | ACCTGC | 1 cut(s) | 2552 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1874, 3361 |
| CciI | TCATGA | 4 cut(s) | 1737, 2811, 2959, 3373 |
| CfoI | GCGC | 4 cut(s) | 35, 653, 2533, 3184 |
| Cfr10I | RCCGGY | 1 cut(s) | 1439 |
| Cfr13I | GGNCC | 3 cut(s) | 621, 1560, 3169 |
| Cfr42I | CCGCGG | 1 cut(s) | 447 |
| CseI | GACGC | 2 cut(s) | 137, 2643 |
| CsiI | ACCWGGT | 1 cut(s) | 3097 |
| Csp6I | GTAC | 9 cut(s) | 148, 519, 626, 1012, 1342, 1449, 2455, 2748, 3188 |
| CspAI | ACCGGT | 1 cut(s) | 1439 |
| CviQI | GTAC | 9 cut(s) | 148, 519, 626, 1012, 1342, 1449, 2455, 2748, 3188 |
| DpnI | GATC | 6 cut(s) | 600, 777, 902, 1645, 1700, 3003 |
| DpnII | GATC | 6 cut(s) | 598, 775, 900, 1643, 1698, 3001 |
| DraI | TTTAAA | 2 cut(s) | 1654, 3105 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 107, 2418 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2617 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 107, 2418 |
| EaeI | YGGCCR | 2 cut(s) | 141, 3163 |
| Eam1104I | CTCTTC | 2 cut(s) | 1143, 2834 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2617 |
| EarI | CTCTTC | 2 cut(s) | 1143, 2834 |
| EciI | GGCGGA | 2 cut(s) | 1478, 3125 |
| Eco130I | CCWWGG | 4 cut(s) | 1691, 2331, 2458, 2625 |
| Eco24I | GRGCYC | 1 cut(s) | 1031 |
| Eco31I | GGTCTC | 2 cut(s) | 993, 3239 |
| Eco32I | GATATC | 2 cut(s) | 853, 1759 |
| Eco47I | GGWCC | 1 cut(s) | 1560 |
| Eco47III | AGCGCT | 1 cut(s) | 3183 |
| Eco57I | CTGAAG | 3 cut(s) | 650, 971, 2999 |
| Eco88I | CYCGRG | 3 cut(s) | 221, 1639, 3236 |
| Eco91I | GGTNACC | 1 cut(s) | 1472 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1560, 3169 |
| EcoO65I | GGTNACC | 1 cut(s) | 1472 |
| EcoRI | GAATTC | 2 cut(s) | 318, 2323 |
| EcoRII | CCWGG | 6 cut(s) | 512, 676, 1606, 2383, 3097, 3165 |
| EcoRV | GATATC | 2 cut(s) | 853, 1759 |
| EcoT14I | CCWWGG | 4 cut(s) | 1691, 2331, 2458, 2625 |
| EcoT38I | GRGCYC | 1 cut(s) | 1031 |
| ErhI | CCWWGG | 4 cut(s) | 1691, 2331, 2458, 2625 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1647, 1679, 1675, 1707, 3299, 3331 |
| FaqI | GGGAC | 7 cut(s) | 203, 698, 1112, 1366, 1546, 1625, 1960 |
| FauI | CCCGC | 2 cut(s) | 91, 1127 |
| FbaI | TGATCA | 1 cut(s) | 775 |
| FblI | GTMKAC | 1 cut(s) | 2410 |
| FokI | GGATG | 8 cut(s) | 1264, 1631, 1645, 1703, 1913, 1929, 2210, 2660 |
| FriOI | GRGCYC | 1 cut(s) | 1031 |
| FspBI | CTAG | 5 cut(s) | 588, 660, 1680, 1979, 2787 |
| GlaI | GCGC | 4 cut(s) | 34, 652, 2532, 3183 |
| GsaI | CCCAGC | 2 cut(s) | 356, 3079 |
| GsuI | CTGGAG | 2 cut(s) | 699, 3125 |
| HaeII | RGCGCY | 2 cut(s) | 2534, 3185 |
| HaeIII | GGCC | 5 cut(s) | 143, 623, 2624, 3165, 3171 |
| HapII | CCGG | 8 cut(s) | 168, 209, 985, 1281, 1440, 1479, 3010, 3162 |
| HgaI | GACGC | 2 cut(s) | 137, 2643 |
| HhaI | GCGC | 4 cut(s) | 35, 653, 2533, 3184 |
| Hin1I | GRCGYC | 2 cut(s) | 129, 2904 |
| Hin6I | GCGC | 4 cut(s) | 33, 651, 2531, 3182 |
| HinP1I | GCGC | 4 cut(s) | 33, 651, 2531, 3182 |
| HincII | GTYRAC | 3 cut(s) | 1941, 2411, 3325 |
| HindII | GTYRAC | 3 cut(s) | 1941, 2411, 3325 |
| HindIII | AAGCTT | 3 cut(s) | 1082, 1656, 2339 |
| HpaII | CCGG | 8 cut(s) | 168, 209, 985, 1281, 1440, 1479, 3010, 3162 |
| HphI | GGTGA | 6 cut(s) | 794, 1057, 1595, 1637, 2060, 3087 |
| Hpy166II | GTNNAC | 8 cut(s) | 432, 833, 1484, 1941, 2411, 2727, 2902, 3325 |
| Hpy8I | GTNNAC | 8 cut(s) | 432, 833, 1484, 1941, 2411, 2727, 2902, 3325 |
| Hpy99I | CGWCG | 1 cut(s) | 2828 |
| HpyAV | CCTTC | 8 cut(s) | 187, 450, 1771, 2624, 2846, 3072, 3182, 3224 |
| HpyCH4III | ACNGT | 6 cut(s) | 630, 709, 782, 1011, 1424, 1625 |
| HpyCH4IV | ACGT | 3 cut(s) | 2364, 2904, 3132 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 650, 1149, 1931, 2098, 2614 |
| HpySE526I | ACGT | 3 cut(s) | 2364, 2904, 3132 |
| Hsp92I | GRCGYC | 2 cut(s) | 129, 2904 |
| HspAI | GCGC | 4 cut(s) | 33, 651, 2531, 3182 |
| Kpn2I | TCCGGA | 1 cut(s) | 208 |
| Ksp22I | TGATCA | 1 cut(s) | 775 |
| KspI | CCGCGG | 1 cut(s) | 447 |
| Kzo9I | GATC | 6 cut(s) | 598, 775, 900, 1643, 1698, 3001 |
| LguI | GCTCTTC | 1 cut(s) | 2834 |
| LmnI | GCTCC | 6 cut(s) | 4, 226, 580, 1192, 1266, 1592 |
| LweI | GCATC | 6 cut(s) | 1609, 1623, 1786, 1794, 2300, 2548 |
| MabI | ACCWGGT | 1 cut(s) | 3097 |
| MaeI | CTAG | 5 cut(s) | 588, 660, 1680, 1979, 2787 |
| MaeII | ACGT | 3 cut(s) | 2364, 2904, 3132 |
| MalI | GATC | 6 cut(s) | 600, 777, 902, 1645, 1700, 3003 |
| MboI | GATC | 6 cut(s) | 598, 775, 900, 1643, 1698, 3001 |
| MboII | GAAGA | 7 cut(s) | 314, 728, 956, 1130, 2851, 2888, 2984 |
| MfeI | CAATTG | 1 cut(s) | 297 |
| MflI | RGATCY | 1 cut(s) | 1698 |
| MhlI | GDGCHC | 4 cut(s) | 1031, 1486, 3303, 3383 |
| MlyI | GAGTC | 6 cut(s) | 392, 827, 1739, 1997, 2155, 2730 |
| MmeI | TCCRAC | 3 cut(s) | 1403, 2330, 3200 |
| MroI | TCCGGA | 1 cut(s) | 208 |
| MroXI | GAANNNNTTC | 2 cut(s) | 720, 2774 |
| MslI | CAYNNNNRTG | 2 cut(s) | 692, 771 |
| MspA1I | CMGCKG | 3 cut(s) | 86, 446, 3019 |
| MspCI | CTTAAG | 1 cut(s) | 2669 |
| MspI | CCGG | 8 cut(s) | 168, 209, 985, 1281, 1440, 1479, 3010, 3162 |
| MspR9I | CCNGG | 8 cut(s) | 514, 678, 1479, 1608, 2385, 3099, 3162, 3167 |
| MunI | CAATTG | 1 cut(s) | 297 |
| Mva1269I | GAATGC | 3 cut(s) | 41, 2308, 2660 |
| MvaI | CCWGG | 6 cut(s) | 514, 678, 1608, 2385, 3099, 3167 |
| MvnI | CGCG | 6 cut(s) | 33, 446, 644, 651, 891, 2008 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 650, 1149, 1931, 2098, 2614 |
| NciI | CCSGG | 2 cut(s) | 1479, 3162 |
| NcoI | CCATGG | 1 cut(s) | 2331 |
| NdeII | GATC | 6 cut(s) | 598, 775, 900, 1643, 1698, 3001 |
| NlaIV | GGNNCC | 3 cut(s) | 582, 622, 1562 |
| NmeAIII | GCCGAG | 1 cut(s) | 169 |
| NmuCI | GTSAC | 8 cut(s) | 20, 609, 630, 701, 1253, 1288, 2982, 3249 |
| NspI | RCATGY | 3 cut(s) | 1261, 1359, 2689 |
| NspV | TTCGAA | 3 cut(s) | 316, 1775, 2663 |
| PagI | TCATGA | 4 cut(s) | 1737, 2811, 2959, 3373 |
| PaqCI | CACCTGC | 1 cut(s) | 2552 |
| PasI | CCCWGGG | 1 cut(s) | 1607 |
| PciSI | GCTCTTC | 1 cut(s) | 2834 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1037 |
| PctI | GAATGC | 3 cut(s) | 41, 2308, 2660 |
| PdmI | GAANNNNTTC | 2 cut(s) | 720, 2774 |
| PfoI | TCCNGGA | 1 cut(s) | 512 |
| PinAI | ACCGGT | 1 cut(s) | 1439 |
| PleI | GAGTC | 6 cut(s) | 391, 826, 1739, 1997, 2154, 2730 |
| PpsI | GAGTC | 6 cut(s) | 391, 826, 1739, 1997, 2154, 2730 |
| PpuMI | RGGWCCY | 1 cut(s) | 1560 |
| PshBI | ATTAAT | 1 cut(s) | 1710 |
| PsiI | TTATAA | 1 cut(s) | 759 |
| Psp1406I | AACGTT | 1 cut(s) | 2364 |
| Psp5II | RGGWCCY | 1 cut(s) | 1560 |
| Psp6I | CCWGG | 6 cut(s) | 512, 676, 1606, 2383, 3097, 3165 |
| PspEI | GGTNACC | 1 cut(s) | 1472 |
| PspFI | CCCAGC | 2 cut(s) | 352, 3075 |
| PspGI | CCWGG | 6 cut(s) | 512, 676, 1606, 2383, 3097, 3165 |
| PspN4I | GGNNCC | 3 cut(s) | 582, 622, 1562 |
| PspPI | GGNCC | 3 cut(s) | 621, 1560, 3169 |
| PspPPI | RGGWCCY | 1 cut(s) | 1560 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 415, 447, 705, 737 |
| PstI | CTGCAG | 2 cut(s) | 163, 2952 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1874, 3361 |
| PsuI | RGATCY | 1 cut(s) | 1698 |
| PvuII | CAGCTG | 1 cut(s) | 3019 |
| RsaI | GTAC | 9 cut(s) | 149, 520, 627, 1013, 1343, 1450, 2456, 2749, 3189 |
| RsaNI | GTAC | 9 cut(s) | 148, 519, 626, 1012, 1342, 1449, 2455, 2748, 3188 |
| RseI | CAYNNNNRTG | 2 cut(s) | 692, 771 |
| SacII | CCGCGG | 1 cut(s) | 447 |
| SalI | GTCGAC | 1 cut(s) | 2409 |
| SapI | GCTCTTC | 1 cut(s) | 2834 |
| Sau3AI | GATC | 6 cut(s) | 598, 775, 900, 1643, 1698, 3001 |
| Sau96I | GGNCC | 3 cut(s) | 621, 1560, 3169 |
| SchI | GAGTC | 6 cut(s) | 392, 827, 1739, 1997, 2155, 2730 |
| ScrFI | CCNGG | 8 cut(s) | 514, 678, 1479, 1608, 2385, 3099, 3162, 3167 |
| SduI | GDGCHC | 4 cut(s) | 1031, 1486, 3303, 3383 |
| SexAI | ACCWGGT | 1 cut(s) | 3097 |
| SfaNI | GCATC | 6 cut(s) | 1609, 1623, 1786, 1794, 2300, 2548 |
| SfcI | CTRYAG | 3 cut(s) | 118, 159, 2948 |
| Sfr303I | CCGCGG | 1 cut(s) | 447 |
| SfuI | TTCGAA | 3 cut(s) | 316, 1775, 2663 |
| SgrBI | CCGCGG | 1 cut(s) | 447 |
| SinI | GGWCC | 1 cut(s) | 1560 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 692, 771 |
| SmlI | CTYRAG | 3 cut(s) | 858, 1664, 2669 |
| SmoI | CTYRAG | 3 cut(s) | 858, 1664, 2669 |
| SspMI | CTAG | 5 cut(s) | 588, 660, 1680, 1979, 2787 |
| StyD4I | CCNGG | 8 cut(s) | 512, 676, 1477, 1606, 2383, 3097, 3160, 3165 |
| StyI | CCWWGG | 4 cut(s) | 1691, 2331, 2458, 2625 |
| TaaI | ACNGT | 6 cut(s) | 630, 709, 782, 1011, 1424, 1625 |
| TaiI | ACGT | 3 cut(s) | 2367, 2907, 3135 |
| TatI | WGTACW | 4 cut(s) | 1011, 1341, 2747, 3187 |
| TauI | GCSGC | 3 cut(s) | 38, 41, 449 |
| TscAI | CASTG | 6 cut(s) | 25, 201, 241, 337, 1788, 2473 |
| TseFI | GTSAC | 8 cut(s) | 20, 609, 630, 701, 1253, 1288, 2982, 3249 |
| Tsp45I | GTSAC | 8 cut(s) | 20, 609, 630, 701, 1253, 1288, 2982, 3249 |
| TspGWI | ACGGA | 5 cut(s) | 39, 863, 1256, 1825, 2481 |
| TspRI | CASTG | 6 cut(s) | 25, 201, 241, 337, 1788, 2473 |
| Vha464I | CTTAAG | 1 cut(s) | 2669 |
| VneI | GTGCAC | 1 cut(s) | 1482 |
| VpaK11BI | GGWCC | 1 cut(s) | 1560 |
| VspI | ATTAAT | 1 cut(s) | 1710 |
| XapI | RAATTY | 9 cut(s) | 318, 2083, 2219, 2323, 2438, 2598, 2879, 3090, 3258 |
| XceI | RCATGY | 3 cut(s) | 1261, 1359, 2689 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2465 |
| XmiI | GTMKAC | 1 cut(s) | 2410 |
| XmnI | GAANNNNTTC | 2 cut(s) | 720, 2774 |
| XspI | CTAG | 5 cut(s) | 588, 660, 1680, 1979, 2787 |
| ZraI | GACGTC | 1 cut(s) | 2905 |