RLG00000031969

Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0007664
Physical Location & Seq
Reverse (-)
9900607 .. 9904699
4093 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031969

Sequence Viewer

Length: 3372 bp
ATGGAGCCTGAGAGAACCACCGCTACATTCTCATCCTCAGCTACAAGCAACGTGAGGCCCAACAACAACACCATGATCACGGTCAAAAGAGAGAAAGCAATTATTGCTCACTACAATGCAGACGCTGGACTTTTAAATGAGTTTGAACAGTCCACTATGTCTGGTAAGTCCTTTAACTACACAAGATCAATGCTTCATCCACTTGAGTCTGTCCCTGAGGAGCACATAACTGCTTATTTCTCAAAAATCCAAAGAGGTGCTCTTGTTCAGTCTTTTGGGTGCATGCTTGCAATTGATGAACCTACGTTTAGGATTGTCTGTTATAGTGAGAACTGCTCTGAGTTTTTGGGTTTGGATGGTATGTTTGAGTCAAAAGAAGAAAAGGGTCTGATTGGAATTGATGCTAAAACTCTGTTTACACCCTCATCTGGGGCTTCACTGGCCAAAGCGGCCGCTTCGAGGGAGCTATCATTGCTGAACCCAATTTGGGTGTATTCTAGGACTACCCAAAAGCCATTTTATGCTATATTGCATAGGATTGATGTTGGGATTGTGATTGATTTAGAGCCTGCCAAGTCTGGGGATCCTGCATTGTCCCTTGCAGGGGCTGTGCAGTCCCAGAAGCTTGCGGTTCGGGCAATCTCGAGGCTTCAGTCTCTCCCTGGAGGAGATATTGGGACTCTGTGTGATACTGTTGCCGAGGATGTTCAGAAGCTGACTGGATATGACAGAGTTATGGTGTACAAGTTTCATGAAGATGATCATGGGGAAGTTGTGTCTGAGATCAGAAGGTCGGATTTGGAGTCCTATTTGGGGTTGCATTATCCTGCCACGGATATCCCTCAGGCGGCTCGGTTCTTGTTCAAGCAGAATCGGGTGCGGATGATTTGTGATTGCAATGCAAATCCTGTTAAACTCATTCAAAGTGAAGAGCTGGAGCAGCCTCTGTGCTTGGTGAATTCAACTCTCCGGTCACCGCATGATTGCCACAGAACATACATGTCAAACATGGGCTCAGTTGCATCACTGGTCATGGCGGTTGCTATCAATAGTCCTGATTCGACCAAGCTTTGGGGGTTGGTGGTGTGCCATCACACTTCACCCCGCTATGTTCCTTTCCCTCTTCGCTATGCTTGTGAGTTTCTTATGCAGGCATTTGTGTTGCAGCTTCACATGGAGCTTCAGTTGGCATCACAATTGGCCGAAAAGAAGATTCTCAAAACACAGACTTTACTTTGTGACATGCTCCTCCGGGATGCCCCGTCTGGTATTGTAACCCAATCTCCTAGTATAATGGATCTTGTGAAGTCTGATGGGGCTGCGTTGTACTATAGTGGGACATGTTGGTTGATGGGTGTCACACCAACTGAGTCACAGGTTAAACATATAGCCGAGTGGCTGCTGAAGAATCATGGCGATTCTACAGGACTGAGTACTGACAGTTTGGCTGAAGCTGGTTACCCTGGTGCAGCTCTACTAGGCAATGCGGTTTGTGGTATGGCTACTGCAAGAATCAGTTCAAAGGATTTTCTGTTTTGGTTCAGGTCTCACACCGCCGAGGAAGTCAAGTGGGGAGGAGCTAAGCATCATCCAGAGGATAAGGATGATGGTGGAAGAATGCACCCAAGATCATCATTTAAGGCTTTTCTTGAAGTAGCGAAAAGTAGAAGCTTGCCTTGGGAGGTCTCCGAGATTAATGCCATCCACTCTTTACAGCTCATAATGAGAGACTCATTCCAGGATATGGAGGAAACTGGTCCTAAGCCAATAAATAATGCTCGTCCTGGCGATGCTGAGATGCAGGTGGAGGGTATGGATGAGATCAGTTCTGTGGCATGTGAAATGGTTAAATTGATTGAGACGGCTCAAGTTCCTATTTTCGGGGTTGATTCAGAGGGTCTCATCAATGGATGGAATACAAAGATGGCTGAATTGACAGGATTAGAAGATGGTGAAGCAATGGGGAAGTCCTTTGTTAATGATATTGTTCATGAGGACTCGCGTGGAGCTGTTGAAAGTATATTATCCAGAGCGTTACAAGGTGATGAGGACAAGAATATTGAGTTAAAACTGAGAAATTTTGGACTTCCTCAGCAAAACTCAGTGGTATATATTGTGGCCAACAGTTGCACAAGTAGGAATCATGCAAACAATGTAGTTGGCGCATGCTTCGTGGGTCAAGACATTACTTGTGAAAAACTTGTTACGGATAAATTTATCCAGTTGCAAGGGGACTATAAGGCTATCATACAGAGTCTTAACCCATTGATTCCACCAATATTTGCATCTGATGAGAATGCCTACTGCTCTGAATGGAATGCAGCAATGGAAAAGCTGACTGGTTTGACAAGAGATGATGTTATTGGTAAAATGCTCCCTGGAGAAATCTTTGGAGAGTTCTGTCAATTGAAAGGTCAAGATTCGCTAACCAAATTTAGGATTGTACTATATCAAGGAATCATTGGGCAAGACATTGAAAAGTTTCCATTTGGGTTTTTTGATAGAGAAGGGAAGTATGTTGAGGTGCTCTTAACAGCAAGCAAGAGGACTGATGCCAATGGGAATATAATTGGTTGCTTCTGCTTCTTGCAAACATTTCTACCAGACCTGCAGCCAGCCATGGAAGGATGCGGACAAGAGGATAAATTCTCTTCAAAACTTAAGGAATTAACTTACATGCGACAAGAGGTGAAAAATCCTTTAAGTGGTATCCGGTTTACACATAGACTCCTTGAAAATACAAATGTTTCAGAATATCAGAAGCAATTTCTTGACACTAGTGAAGCATGTGAAAGACAAATCATGGCAATCCTTGAGAATCTGGATACGAGGAGCATAGAGGAAGGCAATGTGAAGCTGAACATGGAAGAATTTCTCTTGAGAACGCTTATAGATGCCATTGTGAGTCAATCAATGATCTCATTGAGGGAAAGAAATCTACAGTTATTTCAAGAGATTCCAGAAGAACTCAAAACACTATCTTTGCTTGGCGACCAAATCAGGCTTCAGTTGGTCTTGTCAGATTTCTTGCTCAATGTGGTGCATCATACACCTTCTCCAGATGGCTGGGTTGAAATCAGAATTTCACCAGGTCTAAAGCTAATACAGGATGGCAACACCTATATCCGTTTACAGTTCAGAATGACTCACCCTGGTCAAGGAATTCCCACTGCACTTATTCAAGATATGTTCGCCGGTGAAAATCAGTGGAATACACAAGAAGGGCTTGGGCTAAACCTGTCCAGAAAACATCTCGGTAGAATGAATGGTCAGGTCCAGTATGTTAGAGAGCATGATAAGTGTTACTTCCTCATTGATATTGAACTTAGAACAAGGAAAAGAAAGGCGGAGGGTGTTACTGTCACAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

1124

Amino Acids

125.3

Weight (kDa)

5.41

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_2 PF08446 79 - 191 1.4e-33 PAS fold
GAF PF01590 224 - 391 1.6e-16 GAF domain
PHY PF00360 407 - 582 2.8e-56 Phytochrome region
PAS PF00989 614 - 729 2e-23 PAS fold
PAS_4 PF08448 621 - 730 3.2e-07 PAS fold
PAS PF00989 745 - 864 4.9e-18 PAS fold
HisKA PF00512 886 - 948 2.9e-09 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 997 - 1104 3.7e-11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1792
Acc36I ACCTGC 2 cut(s) 1792, 2616
AccB7I CCANNNNNTGG 2 cut(s) 1071, 1744
AccII CGCG 1 cut(s) 2002
AclWI GGATC 3 cut(s) 578, 591, 1305
AcoI YGGCCR 4 cut(s) 441, 450, 1200, 2118
AcsI RAATTY 8 cut(s) 958, 2077, 2213, 2432, 2645, 2870, 3081, 3162
AcuI CTGAAG 5 cut(s) 635, 1166, 1424, 1470, 2990
AfaI GTAC 4 cut(s) 743, 1328, 1435, 2445
AflII CTTAAG 1 cut(s) 2660
AflIII ACRYGT 2 cut(s) 999, 1340
AhlI ACTAGT 1 cut(s) 2777
AjnI CCWGG 7 cut(s) 661, 1462, 1737, 1783, 2377, 3088, 3151
AjuI GAANNNNNNNTTGG 4 cut(s) 1660, 1692, 2988, 3020
Alw21I GWGCWC 3 cut(s) 225, 262, 2529
Alw26I GTCTC 6 cut(s) 660, 1551, 1690, 1722, 1853, 1904
AlwI GGATC 3 cut(s) 578, 591, 1305
AlwNI CAGNNNCTG 4 cut(s) 125, 608, 715, 946
Ama87I CYCGRG 1 cut(s) 643
AoxI GGCC 5 cut(s) 56, 441, 450, 1200, 2118
ApeKI GCWGC 7 cut(s) 940, 1165, 1319, 1399, 1469, 2321, 2611
ApoI RAATTY 8 cut(s) 958, 2077, 2213, 2432, 2645, 2870, 3081, 3162
AseI ATTAAT 1 cut(s) 1695
Asp700I GAANNNNTTC 3 cut(s) 1516, 2481, 2871
AspLEI GCGC 1 cut(s) 2165
AspS9I GGNCC 3 cut(s) 57, 1757, 3274
AsuC2I CCSGG 1 cut(s) 1253
AsuHPI GGTGA 9 cut(s) 966, 967, 1092, 1964, 2054, 2701, 3078, 3140, 3209
AvaI CYCGRG 1 cut(s) 643
AvaII GGWCC 2 cut(s) 1757, 3274
AxyI CCTNAGG 2 cut(s) 216, 843
BalI TGGCCA 2 cut(s) 443, 2120
BamHI GGATCC 1 cut(s) 583
BanII GRGCYC 1 cut(s) 1016
Bbv12I GWGCWC 3 cut(s) 225, 262, 2529
BbvCI CCTCAGC 2 cut(s) 37, 2091
BbvI GCAGC 7 cut(s) 952, 1177, 1306, 1386, 1481, 2333, 2623
BceAI ACGGC 1 cut(s) 1878
BcgI CGANNNNNNTGC 2 cut(s) 1679, 1713
BciT130I CCWGG 7 cut(s) 663, 1464, 1739, 1785, 2379, 3090, 3153
BciVI GTATCC 2 cut(s) 2720, 2818
BclI TGATCA 2 cut(s) 75, 760
BcnI CCSGG 1 cut(s) 1253
BcoDI GTCTC 6 cut(s) 660, 1551, 1690, 1722, 1853, 1904
BcuI ACTAGT 1 cut(s) 2777
BfaI CTAG 4 cut(s) 498, 1287, 1478, 2778
BfmI CTRYAG 4 cut(s) 1330, 1422, 2609, 2939
BfrI CTTAAG 1 cut(s) 2660
BfuAI ACCTGC 2 cut(s) 1792, 2616
BfuI GTATCC 2 cut(s) 2720, 2818
BglI GCCNNNNNGGC 1 cut(s) 449
BlpI GCTNAGC 1 cut(s) 1581
BmcAI AGTACT 1 cut(s) 1435
Bme1390I CCNGG 8 cut(s) 663, 1253, 1464, 1739, 1785, 2379, 3090, 3153
Bme18I GGWCC 2 cut(s) 1757, 3274
BmeT110I CYCGRG 1 cut(s) 643
BmgT120I GGNCC 3 cut(s) 57, 1757, 3274
BmiI GGNNCC 2 cut(s) 6, 585
BmrFI CCNGG 8 cut(s) 663, 1253, 1464, 1739, 1785, 2379, 3090, 3153
BplI GAGNNNNNCTC 2 cut(s) 320, 352
BpmI CTGGAG 4 cut(s) 684, 956, 2400, 3042
Bpu10I CCTNAGC 3 cut(s) 37, 1761, 2091
Bpu1102I GCTNAGC 1 cut(s) 1581
BpuEI CTTGAG 4 cut(s) 224, 1851, 2834, 2899
BpuMI CCSGG 1 cut(s) 1253
BsaI GGTCTC 3 cut(s) 1551, 1690, 1904
BsaJI CCNNGG 9 cut(s) 661, 699, 831, 1462, 1557, 1676, 2377, 2619, 3151
BsaWI WCCGGW 2 cut(s) 969, 2712
BsaXI ACNNNNNCTCC 8 cut(s) 1169, 1199, 1267, 1297, 2712, 2742, 3040, 3070
Bse118I RCCGGY 1 cut(s) 3194
Bse1I ACTGG 7 cut(s) 444, 724, 1032, 1759, 2221, 2344, 3277
Bse21I CCTNAGG 2 cut(s) 216, 843
Bse3DI GCAATG 6 cut(s) 470, 904, 1489, 1965, 2331, 2854
BseBI CCWGG 7 cut(s) 663, 1464, 1739, 1785, 2379, 3090, 3153
BseDI CCNNGG 9 cut(s) 661, 699, 831, 1462, 1557, 1676, 2377, 2619, 3151
BseMI GCAATG 6 cut(s) 470, 904, 1489, 1965, 2331, 2854
BseNI ACTGG 7 cut(s) 444, 724, 1032, 1759, 2221, 2344, 3277
BseRI GAGGAG 5 cut(s) 233, 681, 1238, 1590, 2845
BseX3I CGGCCG 1 cut(s) 450
BseXI GCAGC 7 cut(s) 952, 1177, 1306, 1386, 1481, 2333, 2623
BseYI CCCAGC 1 cut(s) 3066
BsgI GTGCAG 3 cut(s) 632, 1488, 3156
Bsh1236I CGCG 1 cut(s) 2002
Bsh1285I CGRYCG 1 cut(s) 453
BshFI GGCC 5 cut(s) 58, 443, 452, 1202, 2120
BsiEI CGRYCG 1 cut(s) 453
BsiHKAI GWGCWC 3 cut(s) 225, 262, 2529
BsiHKCI CYCGRG 1 cut(s) 643
BsiSI CCGG 4 cut(s) 970, 1252, 2713, 3195
BslFI GGGAC 6 cut(s) 197, 580, 601, 691, 1351, 2246
BsmAI GTCTC 6 cut(s) 660, 1551, 1690, 1722, 1853, 1904
BsmBI CGTCTC 1 cut(s) 1853
BsmFI GGGAC 6 cut(s) 197, 580, 601, 691, 1351, 2246
BsmI GAATGC 3 cut(s) 1623, 2302, 2323
BsnI GGCC 5 cut(s) 58, 443, 452, 1202, 2120
Bso31I GGTCTC 3 cut(s) 1551, 1690, 1904
BsoBI CYCGRG 1 cut(s) 643
Bsp1286I GDGCHC 4 cut(s) 225, 262, 1016, 2529
Bsp1407I TGTACA 1 cut(s) 741
Bsp143I GATC 9 cut(s) 75, 185, 583, 760, 783, 1297, 1628, 1821, 2916
Bsp1720I GCTNAGC 1 cut(s) 1581
Bsp19I CCATGG 1 cut(s) 2619
BspANI GGCC 5 cut(s) 58, 443, 452, 1202, 2120
BspFNI CGCG 1 cut(s) 2002
BspHI TCATGA 2 cut(s) 751, 1990
BspLI GGNNCC 2 cut(s) 6, 585
BspMAI CTGCAG 1 cut(s) 2613
BspMI ACCTGC 2 cut(s) 1792, 2616
BspPI GGATC 3 cut(s) 578, 591, 1305
BspQI GCTCTTC 1 cut(s) 924
BspTI CTTAAG 1 cut(s) 2660
BspTNI GGTCTC 3 cut(s) 1551, 1690, 1904
BsrDI GCAATG 6 cut(s) 470, 904, 1489, 1965, 2331, 2854
BsrFI RCCGGY 1 cut(s) 3194
BsrGI TGTACA 1 cut(s) 741
BsrI ACTGG 7 cut(s) 444, 724, 1032, 1759, 2221, 2344, 3277
BssAI RCCGGY 1 cut(s) 3194
BssECI CCNNGG 9 cut(s) 661, 699, 831, 1462, 1557, 1676, 2377, 2619, 3151
BssMI GATC 9 cut(s) 75, 185, 583, 760, 783, 1297, 1628, 1821, 2916
BssT1I CCWWGG 2 cut(s) 1676, 2619
Bst2UI CCWGG 7 cut(s) 663, 1464, 1739, 1785, 2379, 3090, 3153
Bst4CI ACNGT 8 cut(s) 82, 150, 694, 1442, 2126, 2943, 3135, 3361
Bst6I CTCTTC 3 cut(s) 924, 1128, 2656
BstAFI CTTAAG 1 cut(s) 2660
BstAPI GCANNNNNTGC 1 cut(s) 104
BstAUI TGTACA 1 cut(s) 741
BstC8I GCNNGC 9 cut(s) 284, 288, 570, 627, 1152, 1673, 2167, 2539, 2616
BstDSI CCRYGG 2 cut(s) 831, 2619
BstEII GGTNACC 2 cut(s) 972, 1457
BstENI CCTNNNNNAGG 1 cut(s) 3156
BstFNI CGCG 1 cut(s) 2002
BstHHI GCGC 1 cut(s) 2165
BstKTI GATC 9 cut(s) 78, 188, 586, 763, 786, 1300, 1631, 1824, 2919
BstMAI GTCTC 6 cut(s) 660, 1551, 1690, 1722, 1853, 1904
BstMBI GATC 9 cut(s) 75, 185, 583, 760, 783, 1297, 1628, 1821, 2916
BstMCI CGRYCG 1 cut(s) 453
BstMWI GCNNNNNNNGC 6 cut(s) 104, 440, 449, 472, 635, 940
BstNI CCWGG 7 cut(s) 663, 1464, 1739, 1785, 2379, 3090, 3153
BstNSI RCATGY 8 cut(s) 286, 1003, 1246, 1344, 1839, 2169, 2680, 2790
BstPI GGTNACC 2 cut(s) 972, 1457
BstSCI CCNGG 8 cut(s) 661, 1251, 1462, 1737, 1783, 2377, 3088, 3151
BstSFI CTRYAG 4 cut(s) 1330, 1422, 2609, 2939
BstUI CGCG 1 cut(s) 2002
BstV1I GCAGC 7 cut(s) 952, 1177, 1306, 1386, 1481, 2333, 2623
BstX2I RGATCY 2 cut(s) 583, 1297
BstXI CCANNNNNNTGG 1 cut(s) 3066
BstYI RGATCY 2 cut(s) 583, 1297
BstZI CGGCCG 1 cut(s) 450
Bsu36I CCTNAGG 2 cut(s) 216, 843
BsuI GTATCC 2 cut(s) 2720, 2818
BsuRI GGCC 5 cut(s) 58, 443, 452, 1202, 2120
BtgI CCRYGG 2 cut(s) 831, 2619
BtgZI GCGATG 1 cut(s) 1803
BtsI GCAGTG 1 cut(s) 3168
BtsIMutI CAGTG 5 cut(s) 437, 1025, 2109, 3168, 3212
BveI ACCTGC 2 cut(s) 1792, 2616
Cac8I GCNNGC 9 cut(s) 284, 288, 570, 627, 1152, 1673, 2167, 2539, 2616
CaiI CAGNNNCTG 4 cut(s) 125, 608, 715, 946
CciI TCATGA 2 cut(s) 751, 1990
CciNI GCGGCCGC 1 cut(s) 450
CfoI GCGC 1 cut(s) 2165
Cfr10I RCCGGY 1 cut(s) 3194
Cfr13I GGNCC 3 cut(s) 57, 1757, 3274
CseI GACGC 1 cut(s) 131
CsiI ACCWGGT 1 cut(s) 3088
Csp6I GTAC 4 cut(s) 742, 1327, 1434, 2444
CviQI GTAC 4 cut(s) 742, 1327, 1434, 2444
DpnI GATC 9 cut(s) 77, 187, 585, 762, 785, 1299, 1630, 1823, 2918
DpnII GATC 9 cut(s) 75, 185, 583, 760, 783, 1297, 1628, 1821, 2916
DraI TTTAAA 1 cut(s) 135
EaeI YGGCCR 4 cut(s) 441, 450, 1200, 2118
EagI CGGCCG 1 cut(s) 450
Eam1104I CTCTTC 3 cut(s) 924, 1128, 2656
EarI CTCTTC 3 cut(s) 924, 1128, 2656
EciI GGCGGA 1 cut(s) 3362
EclXI CGGCCG 1 cut(s) 450
Eco130I CCWWGG 2 cut(s) 1676, 2619
Eco24I GRGCYC 1 cut(s) 1016
Eco31I GGTCTC 3 cut(s) 1551, 1690, 1904
Eco32I GATATC 1 cut(s) 838
Eco47I GGWCC 2 cut(s) 1757, 3274
Eco52I CGGCCG 1 cut(s) 450
Eco57I CTGAAG 5 cut(s) 635, 1166, 1424, 1470, 2990
Eco81I CCTNAGG 2 cut(s) 216, 843
Eco88I CYCGRG 1 cut(s) 643
Eco91I GGTNACC 2 cut(s) 972, 1457
EcoNI CCTNNNNNAGG 1 cut(s) 3156
EcoO65I GGTNACC 2 cut(s) 972, 1457
EcoRI GAATTC 2 cut(s) 958, 3162
EcoRII CCWGG 7 cut(s) 661, 1462, 1737, 1783, 2377, 3088, 3151
EcoRV GATATC 1 cut(s) 838
EcoT14I CCWWGG 2 cut(s) 1676, 2619
EcoT38I GRGCYC 1 cut(s) 1016
ErhI CCWWGG 2 cut(s) 1676, 2619
Esp3I CGTCTC 1 cut(s) 1853
FalI AAGNNNNNCTT 6 cut(s) 1660, 1692, 3210, 3242, 3290, 3322
FaqI GGGAC 6 cut(s) 197, 580, 601, 691, 1351, 2246
FauI CCCGC 1 cut(s) 1112
FbaI TGATCA 2 cut(s) 75, 760
FriOI GRGCYC 1 cut(s) 1016
FspBI CTAG 4 cut(s) 498, 1287, 1478, 2778
GlaI GCGC 1 cut(s) 2164
GsaI CCCAGC 1 cut(s) 3070
GsuI CTGGAG 4 cut(s) 684, 956, 2400, 3042
HaeIII GGCC 5 cut(s) 58, 443, 452, 1202, 2120
HapII CCGG 4 cut(s) 970, 1252, 2713, 3195
HgaI GACGC 1 cut(s) 131
HhaI GCGC 1 cut(s) 2165
Hin6I GCGC 1 cut(s) 2163
HinP1I GCGC 1 cut(s) 2163
HindIII AAGCTT 3 cut(s) 623, 1067, 1669
HpaII CCGG 4 cut(s) 970, 1252, 2713, 3195
HphI GGTGA 9 cut(s) 966, 967, 1092, 1964, 2054, 2701, 3078, 3140, 3209
Hpy166II GTNNAC 5 cut(s) 153, 417, 742, 2718, 3131
Hpy8I GTNNAC 5 cut(s) 153, 417, 742, 2718, 3131
HpyAV CCTTC 6 cut(s) 783, 2501, 2618, 2837, 3063, 3215
HpyCH4III ACNGT 8 cut(s) 82, 150, 694, 1442, 2126, 2943, 3135, 3361
HpyCH4IV ACGT 2 cut(s) 51, 305
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 440, 449, 472, 635, 940
HpySE526I ACGT 2 cut(s) 51, 305
HspAI GCGC 1 cut(s) 2163
Ksp22I TGATCA 2 cut(s) 75, 760
Kzo9I GATC 9 cut(s) 75, 185, 583, 760, 783, 1297, 1628, 1821, 2916
LguI GCTCTTC 1 cut(s) 924
Lsp1109I GCAGC 7 cut(s) 952, 1177, 1306, 1386, 1481, 2333, 2623
MabI ACCWGGT 1 cut(s) 3088
MaeI CTAG 4 cut(s) 498, 1287, 1478, 2778
MaeII ACGT 2 cut(s) 51, 305
MalI GATC 9 cut(s) 77, 187, 585, 762, 785, 1299, 1630, 1823, 2918
MboI GATC 9 cut(s) 75, 185, 583, 760, 783, 1297, 1628, 1821, 2916
MfeI CAATTG 3 cut(s) 291, 1196, 2405
MflI RGATCY 2 cut(s) 583, 1297
MhlI GDGCHC 4 cut(s) 225, 262, 1016, 2529
MlsI TGGCCA 2 cut(s) 443, 2120
MluNI TGGCCA 2 cut(s) 443, 2120
MmeI TCCRAC 1 cut(s) 774
Mox20I TGGCCA 2 cut(s) 443, 2120
MroXI GAANNNNTTC 3 cut(s) 1516, 2481, 2871
MscI TGGCCA 2 cut(s) 443, 2120
MslI CAYNNNNRTG 2 cut(s) 114, 756
Msp20I TGGCCA 2 cut(s) 443, 2120
MspCI CTTAAG 1 cut(s) 2660
MspI CCGG 4 cut(s) 970, 1252, 2713, 3195
MspR9I CCNGG 8 cut(s) 663, 1253, 1464, 1739, 1785, 2379, 3090, 3153
MunI CAATTG 3 cut(s) 291, 1196, 2405
Mva1269I GAATGC 3 cut(s) 1623, 2302, 2323
MvaI CCWGG 7 cut(s) 663, 1464, 1739, 1785, 2379, 3090, 3153
MvnI CGCG 1 cut(s) 2002
MwoI GCNNNNNNNGC 6 cut(s) 104, 440, 449, 472, 635, 940
NciI CCSGG 1 cut(s) 1253
NcoI CCATGG 1 cut(s) 2619
NdeII GATC 9 cut(s) 75, 185, 583, 760, 783, 1297, 1628, 1821, 2916
NlaIV GGNNCC 2 cut(s) 6, 585
NmeAIII GCCGAG 3 cut(s) 724, 1417, 1582
NmuCI GTSAC 5 cut(s) 972, 1238, 1357, 1371, 3361
NotI GCGGCCGC 1 cut(s) 450
NspI RCATGY 8 cut(s) 286, 1003, 1246, 1344, 1839, 2169, 2680, 2790
PaeI GCATGC 2 cut(s) 286, 2169
PaeR7I CTCGAG 1 cut(s) 643
PagI TCATGA 2 cut(s) 751, 1990
PaqCI CACCTGC 1 cut(s) 1792
PciI ACATGT 2 cut(s) 999, 1340
PciSI GCTCTTC 1 cut(s) 924
PctI GAATGC 3 cut(s) 1623, 2302, 2323
PdmI GAANNNNTTC 3 cut(s) 1516, 2481, 2871
PflMI CCANNNNNTGG 2 cut(s) 1071, 1744
PfoI TCCNGGA 2 cut(s) 1251, 1737
PscI ACATGT 2 cut(s) 999, 1340
PshBI ATTAAT 1 cut(s) 1695
Psp6I CCWGG 7 cut(s) 661, 1462, 1737, 1783, 2377, 3088, 3151
PspEI GGTNACC 2 cut(s) 972, 1457
PspFI CCCAGC 1 cut(s) 3066
PspGI CCWGG 7 cut(s) 661, 1462, 1737, 1783, 2377, 3088, 3151
PspN4I GGNNCC 2 cut(s) 6, 585
PspPI GGNCC 3 cut(s) 57, 1757, 3274
PsrI GAACNNNNNNTAC 2 cut(s) 7, 39
PstI CTGCAG 1 cut(s) 2613
PstNI CAGNNNCTG 4 cut(s) 125, 608, 715, 946
PsuI RGATCY 2 cut(s) 583, 1297
RsaI GTAC 4 cut(s) 743, 1328, 1435, 2445
RsaNI GTAC 4 cut(s) 742, 1327, 1434, 2444
RseI CAYNNNNRTG 2 cut(s) 114, 756
SapI GCTCTTC 1 cut(s) 924
Sau3AI GATC 9 cut(s) 75, 185, 583, 760, 783, 1297, 1628, 1821, 2916
Sau96I GGNCC 3 cut(s) 57, 1757, 3274
ScaI AGTACT 1 cut(s) 1435
ScrFI CCNGG 8 cut(s) 663, 1253, 1464, 1739, 1785, 2379, 3090, 3153
SduI GDGCHC 4 cut(s) 225, 262, 1016, 2529
SexAI ACCWGGT 1 cut(s) 3088
SfcI CTRYAG 4 cut(s) 1330, 1422, 2609, 2939
SfiI GGCCNNNNNGGCC 1 cut(s) 449
Sfr274I CTCGAG 1 cut(s) 643
SgrAI CRCCGGYG 1 cut(s) 3194
SinI GGWCC 2 cut(s) 1757, 3274
SlaI CTCGAG 1 cut(s) 643
SmiMI CAYNNNNRTG 2 cut(s) 114, 756
SmlI CTYRAG 6 cut(s) 203, 643, 1866, 2660, 2813, 2878
SmoI CTYRAG 6 cut(s) 203, 643, 1866, 2660, 2813, 2878
SpeI ACTAGT 1 cut(s) 2777
SphI GCATGC 2 cut(s) 286, 2169
SspI AATATT 2 cut(s) 2059, 2280
SspMI CTAG 4 cut(s) 498, 1287, 1478, 2778
StyD4I CCNGG 8 cut(s) 661, 1251, 1462, 1737, 1783, 2377, 3088, 3151
StyI CCWWGG 2 cut(s) 1676, 2619
TaaI ACNGT 8 cut(s) 82, 150, 694, 1442, 2126, 2943, 3135, 3361
TaiI ACGT 2 cut(s) 54, 308
TaqI TCGA 3 cut(s) 458, 644, 1061
TatI WGTACW 4 cut(s) 741, 1326, 1433, 2443
TauI GCSGC 3 cut(s) 452, 455, 851
TscAI CASTG 5 cut(s) 444, 1032, 2109, 3175, 3212
TseFI GTSAC 5 cut(s) 972, 1238, 1357, 1371, 3361
TseI GCWGC 7 cut(s) 940, 1165, 1319, 1399, 1469, 2321, 2611
Tsp45I GTSAC 5 cut(s) 972, 1238, 1357, 1371, 3361
TspDTI ATGAA 6 cut(s) 185, 312, 740, 768, 1979, 3278
TspGWI ACGGA 3 cut(s) 848, 2222, 3116
TspRI CASTG 5 cut(s) 444, 1032, 2109, 3175, 3212
Van91I CCANNNNNTGG 2 cut(s) 1071, 1744
Vha464I CTTAAG 1 cut(s) 2660
VpaK11BI GGWCC 2 cut(s) 1757, 3274
VspI ATTAAT 1 cut(s) 1695
XagI CCTNNNNNAGG 1 cut(s) 3156
XapI RAATTY 8 cut(s) 958, 2077, 2213, 2432, 2645, 2870, 3081, 3162
XceI RCATGY 8 cut(s) 286, 1003, 1246, 1344, 1839, 2169, 2680, 2790
XhoI CTCGAG 1 cut(s) 643
XmnI GAANNNNTTC 3 cut(s) 1516, 2481, 2871
XspI CTAG 4 cut(s) 498, 1287, 1478, 2778
ZrmI AGTACT 1 cut(s) 1435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.