Peptidoglycan-binding LysM domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g18360 FvH4_5g18360 |
| malus_domestica | MD06G1239300.v1.1 MD14G1245200.v1.1 |
| prunus_persica | Prupe.5G243200_v2.0.a1 |
| pyrus_communis | pycom06g21490 pycom14g20620 |
| rosa_chinensis | RchiOBHm_Chr7g0177231 |
| rosa_laevigata | RLG00000005554 |
| rosa_multiflora | Rmu_sc0005310.1_g000015 Rmu_sc0024964.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00276030 |
| rosa_rugosa | Rorug06G0404000 |
| rosa_samantha | Rh7AG004000 Rh7BG003800 Rh7CG003700 Rh7DG003700 |
| rosa_wichuraiana | Rw7G000320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 281 |
| AciI | CCGC | 1 cut(s) | 286 |
| AcoI | YGGCCR | 3 cut(s) | 185, 243, 283 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 281 |
| AgsI | TTSAA | 2 cut(s) | 195, 221 |
| AluBI | AGCT | 3 cut(s) | 147, 204, 224 |
| AluI | AGCT | 3 cut(s) | 147, 204, 224 |
| AoxI | GGCC | 3 cut(s) | 185, 243, 283 |
| ApeKI | GCWGC | 1 cut(s) | 31 |
| BalI | TGGCCA | 2 cut(s) | 187, 245 |
| BbvI | GCAGC | 1 cut(s) | 18 |
| BccI | CCATC | 3 cut(s) | 48, 235, 254 |
| BisI | GCNGC | 2 cut(s) | 32, 286 |
| BlsI | GCNGC | 2 cut(s) | 33, 287 |
| BmsI | GCATC | 1 cut(s) | 35 |
| BsaWI | WCCGGW | 1 cut(s) | 70 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 281 |
| Bse1I | ACTGG | 2 cut(s) | 162, 286 |
| BseGI | GGATG | 1 cut(s) | 59 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BseNI | ACTGG | 2 cut(s) | 162, 286 |
| BseXI | GCAGC | 1 cut(s) | 18 |
| BshFI | GGCC | 3 cut(s) | 187, 245, 285 |
| BsiSI | CCGG | 1 cut(s) | 71 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BsnI | GGCC | 3 cut(s) | 187, 245, 285 |
| BspACI | CCGC | 1 cut(s) | 286 |
| BspANI | GGCC | 3 cut(s) | 187, 245, 285 |
| BsrI | ACTGG | 2 cut(s) | 162, 286 |
| Bst4CI | ACNGT | 1 cut(s) | 175 |
| BstF5I | GGATG | 1 cut(s) | 59 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 144, 242 |
| BstV1I | GCAGC | 1 cut(s) | 18 |
| BsuRI | GGCC | 3 cut(s) | 187, 245, 285 |
| BtgZI | GCGATG | 1 cut(s) | 12 |
| BtsCI | GGATG | 1 cut(s) | 59 |
| CviAII | CATG | 2 cut(s) | 100, 112 |
| EaeI | YGGCCR | 3 cut(s) | 185, 243, 283 |
| FaeI | CATG | 2 cut(s) | 103, 115 |
| FaiI | YATR | 2 cut(s) | 101, 113 |
| FatI | CATG | 2 cut(s) | 99, 111 |
| Fnu4HI | GCNGC | 2 cut(s) | 32, 286 |
| FokI | GGATG | 1 cut(s) | 66 |
| Fsp4HI | GCNGC | 2 cut(s) | 32, 286 |
| GluI | GCNGC | 2 cut(s) | 32, 286 |
| HaeIII | GGCC | 3 cut(s) | 187, 245, 285 |
| HapII | CCGG | 1 cut(s) | 71 |
| Hin1II | CATG | 2 cut(s) | 103, 115 |
| HinfI | GANTC | 3 cut(s) | 41, 47, 86 |
| HpaII | CCGG | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 2 cut(s) | 40, 46 |
| Hpy188III | TCNNGA | 1 cut(s) | 51 |
| HpyAV | CCTTC | 1 cut(s) | 227 |
| HpyCH4III | ACNGT | 1 cut(s) | 175 |
| HpyCH4V | TGCA | 2 cut(s) | 34, 236 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 144, 242 |
| Hsp92II | CATG | 2 cut(s) | 103, 115 |
| LmnI | GCTCC | 1 cut(s) | 201 |
| LpnPI | CCDG | 6 cut(s) | 36, 84, 175, 259, 267, 274 |
| Lsp1109I | GCAGC | 1 cut(s) | 18 |
| LweI | GCATC | 1 cut(s) | 35 |
| MlsI | TGGCCA | 2 cut(s) | 187, 245 |
| MluCI | AATT | 1 cut(s) | 180 |
| MluNI | TGGCCA | 2 cut(s) | 187, 245 |
| Mox20I | TGGCCA | 2 cut(s) | 187, 245 |
| MscI | TGGCCA | 2 cut(s) | 187, 245 |
| MseI | TTAA | 1 cut(s) | 149 |
| MslI | CAYNNNNRTG | 2 cut(s) | 98, 116 |
| Msp20I | TGGCCA | 2 cut(s) | 187, 245 |
| MspA1I | CMGCKG | 1 cut(s) | 288 |
| MspI | CCGG | 1 cut(s) | 71 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 144, 242 |
| NlaIII | CATG | 2 cut(s) | 103, 115 |
| NmeAIII | GCCGAG | 1 cut(s) | 47 |
| PfeI | GAWTC | 3 cut(s) | 41, 47, 86 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 281 |
| PkrI | GCNGC | 2 cut(s) | 33, 287 |
| RseI | CAYNNNNRTG | 2 cut(s) | 98, 116 |
| SaqAI | TTAA | 1 cut(s) | 149 |
| SatI | GCNGC | 2 cut(s) | 32, 286 |
| SetI | ASST | 5 cut(s) | 149, 200, 206, 219, 226 |
| SfaNI | GCATC | 1 cut(s) | 35 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 98, 116 |
| Sse9I | AATT | 1 cut(s) | 180 |
| SsiI | CCGC | 1 cut(s) | 286 |
| TaaI | ACNGT | 1 cut(s) | 175 |
| TasI | AATT | 1 cut(s) | 180 |
| TauI | GCSGC | 1 cut(s) | 288 |
| TfiI | GAWTC | 3 cut(s) | 41, 47, 86 |
| Tru1I | TTAA | 1 cut(s) | 149 |
| Tru9I | TTAA | 1 cut(s) | 149 |
| TseI | GCWGC | 1 cut(s) | 31 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 281 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 195 |