Peptidoglycan-binding LysM domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g18360 FvH4_5g18360 |
| malus_domestica | MD06G1239300.v1.1 MD14G1245200.v1.1 |
| prunus_persica | Prupe.5G243200_v2.0.a1 |
| pyrus_communis | pycom06g21490 pycom14g20620 |
| rosa_chinensis | RchiOBHm_Chr7g0177231 |
| rosa_laevigata | RLG00000005554 |
| rosa_multiflora | Rmu_sc0005310.1_g000015 Rmu_sc0024964.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00276030 |
| rosa_rugosa | Rorug06G0404000 |
| rosa_samantha | Rh7AG004000 Rh7BG003800 Rh7CG003700 Rh7DG003700 |
| rosa_wichuraiana | Rw7G000320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1025 |
| AciI | CCGC | 1 cut(s) | 1030 |
| AcoI | YGGCCR | 3 cut(s) | 280, 926, 1027 |
| AcuI | CTGAAG | 2 cut(s) | 429, 666 |
| AcyI | GRCGYC | 1 cut(s) | 634 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 206, 594, 1025 |
| AjnI | CCWGG | 1 cut(s) | 205 |
| AluBI | AGCT | 3 cut(s) | 326, 945, 965 |
| AluI | AGCT | 3 cut(s) | 326, 945, 965 |
| Alw21I | GWGCWC | 3 cut(s) | 72, 328, 359 |
| Alw26I | GTCTC | 1 cut(s) | 82 |
| AoxI | GGCC | 5 cut(s) | 280, 477, 749, 926, 1027 |
| ApeKI | GCWGC | 2 cut(s) | 775, 977 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 37 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 214 |
| AsuHPI | GGTGA | 4 cut(s) | 210, 474, 497, 614 |
| AxyI | CCTNAGG | 1 cut(s) | 271 |
| BalI | TGGCCA | 2 cut(s) | 282, 928 |
| BanII | GRGCYC | 2 cut(s) | 328, 404 |
| BbsI | GAAGAC | 3 cut(s) | 191, 217, 456 |
| Bbv12I | GWGCWC | 3 cut(s) | 72, 328, 359 |
| BbvI | GCAGC | 2 cut(s) | 762, 989 |
| BccI | CCATC | 7 cut(s) | 79, 229, 415, 455, 587, 792, 998 |
| BceAI | ACGGC | 1 cut(s) | 133 |
| BciT130I | CCWGG | 1 cut(s) | 207 |
| BcoDI | GTCTC | 1 cut(s) | 82 |
| BfaI | CTAG | 1 cut(s) | 519 |
| BfmI | CTRYAG | 3 cut(s) | 159, 312, 345 |
| BglII | AGATCT | 1 cut(s) | 163 |
| BisI | GCNGC | 3 cut(s) | 776, 978, 1030 |
| BlsI | GCNGC | 3 cut(s) | 777, 979, 1031 |
| Bme1390I | CCNGG | 1 cut(s) | 207 |
| BmrFI | CCNGG | 1 cut(s) | 207 |
| BmrI | ACTGGG | 2 cut(s) | 809, 833 |
| BmsI | GCATC | 2 cut(s) | 926, 989 |
| BmuI | ACTGGG | 2 cut(s) | 809, 833 |
| BpiI | GAAGAC | 3 cut(s) | 191, 217, 456 |
| BsaHI | GRCGYC | 1 cut(s) | 634 |
| BsaJI | CCNNGG | 2 cut(s) | 330, 588 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 62, 92, 697, 727 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 206, 594, 1025 |
| Bse118I | RCCGGY | 1 cut(s) | 98 |
| Bse1I | ACTGG | 3 cut(s) | 815, 828, 1030 |
| Bse21I | CCTNAGG | 1 cut(s) | 271 |
| Bse3DI | GCAATG | 2 cut(s) | 357, 564 |
| BseBI | CCWGG | 1 cut(s) | 207 |
| BseDI | CCNNGG | 2 cut(s) | 330, 588 |
| BseGI | GGATG | 5 cut(s) | 150, 266, 598, 684, 803 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 206, 594, 1025 |
| BseMI | GCAATG | 2 cut(s) | 357, 564 |
| BseMII | CTCAG | 4 cut(s) | 285, 537, 732, 774 |
| BseNI | ACTGG | 3 cut(s) | 815, 828, 1030 |
| BseRI | GAGGAG | 4 cut(s) | 51, 60, 63, 911 |
| BseXI | GCAGC | 2 cut(s) | 762, 989 |
| BshFI | GGCC | 5 cut(s) | 282, 479, 751, 928, 1029 |
| BsiHKAI | GWGCWC | 3 cut(s) | 72, 328, 359 |
| BsiSI | CCGG | 1 cut(s) | 99 |
| BslFI | GGGAC | 1 cut(s) | 834 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 206, 594, 1025 |
| BsmAI | GTCTC | 1 cut(s) | 82 |
| BsmFI | GGGAC | 1 cut(s) | 834 |
| BsnI | GGCC | 5 cut(s) | 282, 479, 751, 928, 1029 |
| Bsp1286I | GDGCHC | 4 cut(s) | 72, 328, 359, 404 |
| Bsp143I | GATC | 2 cut(s) | 163, 308 |
| Bsp19I | CCATGG | 1 cut(s) | 588 |
| BspACI | CCGC | 1 cut(s) | 1030 |
| BspANI | GGCC | 5 cut(s) | 282, 479, 751, 928, 1029 |
| BspCNI | CTCAG | 4 cut(s) | 284, 538, 731, 775 |
| BsrDI | GCAATG | 2 cut(s) | 357, 564 |
| BsrFI | RCCGGY | 1 cut(s) | 98 |
| BsrI | ACTGG | 3 cut(s) | 815, 828, 1030 |
| BssAI | RCCGGY | 1 cut(s) | 98 |
| BssECI | CCNNGG | 2 cut(s) | 330, 588 |
| BssMI | GATC | 2 cut(s) | 163, 308 |
| BssNI | GRCGYC | 1 cut(s) | 634 |
| BssT1I | CCWWGG | 2 cut(s) | 330, 588 |
| Bst2UI | CCWGG | 1 cut(s) | 207 |
| Bst4CI | ACNGT | 1 cut(s) | 859 |
| BstACI | GRCGYC | 1 cut(s) | 634 |
| BstC8I | GCNNGC | 5 cut(s) | 100, 284, 763, 963, 1010 |
| BstDEI | CTNAG | 4 cut(s) | 271, 546, 718, 783 |
| BstDSI | CCRYGG | 1 cut(s) | 588 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 204 |
| BstF5I | GGATG | 5 cut(s) | 150, 266, 598, 684, 803 |
| BstKTI | GATC | 2 cut(s) | 166, 311 |
| BstMAI | GTCTC | 1 cut(s) | 82 |
| BstMBI | GATC | 2 cut(s) | 163, 308 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 104, 292, 767 |
| BstNI | CCWGG | 1 cut(s) | 207 |
| BstSCI | CCNGG | 1 cut(s) | 205 |
| BstSFI | CTRYAG | 3 cut(s) | 159, 312, 345 |
| BstV1I | GCAGC | 2 cut(s) | 762, 989 |
| BstV2I | GAAGAC | 3 cut(s) | 191, 217, 456 |
| BstX2I | RGATCY | 1 cut(s) | 163 |
| BstYI | RGATCY | 1 cut(s) | 163 |
| Bsu36I | CCTNAGG | 1 cut(s) | 271 |
| BsuRI | GGCC | 5 cut(s) | 282, 479, 751, 928, 1029 |
| BtgI | CCRYGG | 1 cut(s) | 588 |
| BtsCI | GGATG | 5 cut(s) | 150, 266, 598, 684, 803 |
| BtsI | GCAGTG | 2 cut(s) | 715, 777 |
| BtsIMutI | CAGTG | 5 cut(s) | 255, 715, 777, 822, 843 |
| Cac8I | GCNNGC | 5 cut(s) | 100, 284, 763, 963, 1010 |
| Cfr10I | RCCGGY | 1 cut(s) | 98 |
| CseI | GACGC | 1 cut(s) | 623 |
| CviAII | CATG | 4 cut(s) | 415, 514, 589, 745 |
| DdeI | CTNAG | 4 cut(s) | 271, 546, 718, 783 |
| DpnI | GATC | 2 cut(s) | 165, 310 |
| DpnII | GATC | 2 cut(s) | 163, 308 |
| DraI | TTTAAA | 1 cut(s) | 891 |
| EaeI | YGGCCR | 3 cut(s) | 280, 926, 1027 |
| Ecl136II | GAGCTC | 1 cut(s) | 326 |
| Eco130I | CCWWGG | 2 cut(s) | 330, 588 |
| Eco147I | AGGCCT | 1 cut(s) | 479 |
| Eco24I | GRGCYC | 2 cut(s) | 328, 404 |
| Eco53kI | GAGCTC | 1 cut(s) | 326 |
| Eco57I | CTGAAG | 2 cut(s) | 429, 666 |
| Eco81I | CCTNAGG | 1 cut(s) | 271 |
| EcoICRI | GAGCTC | 1 cut(s) | 326 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 204 |
| EcoRII | CCWGG | 1 cut(s) | 205 |
| EcoT14I | CCWWGG | 2 cut(s) | 330, 588 |
| EcoT38I | GRGCYC | 2 cut(s) | 328, 404 |
| ErhI | CCWWGG | 2 cut(s) | 330, 588 |
| FaeI | CATG | 4 cut(s) | 418, 517, 592, 748 |
| FaiI | YATR | 9 cut(s) | 65, 375, 416, 510, 515, 570, 572, 590, 746 |
| FaqI | GGGAC | 1 cut(s) | 834 |
| FatI | CATG | 4 cut(s) | 414, 513, 588, 744 |
| Fnu4HI | GCNGC | 3 cut(s) | 776, 978, 1030 |
| FokI | GGATG | 5 cut(s) | 157, 253, 605, 691, 810 |
| FriOI | GRGCYC | 2 cut(s) | 328, 404 |
| Fsp4HI | GCNGC | 3 cut(s) | 776, 978, 1030 |
| FspBI | CTAG | 1 cut(s) | 519 |
| GluI | GCNGC | 3 cut(s) | 776, 978, 1030 |
| HaeIII | GGCC | 5 cut(s) | 282, 479, 751, 928, 1029 |
| HapII | CCGG | 1 cut(s) | 99 |
| HgaI | GACGC | 1 cut(s) | 623 |
| Hin1I | GRCGYC | 1 cut(s) | 634 |
| Hin1II | CATG | 4 cut(s) | 418, 517, 592, 748 |
| HinfI | GANTC | 5 cut(s) | 494, 584, 785, 791, 830 |
| HpaII | CCGG | 1 cut(s) | 99 |
| HphI | GGTGA | 4 cut(s) | 210, 474, 497, 614 |
| Hpy166II | GTNNAC | 1 cut(s) | 430 |
| Hpy188I | TCNGA | 9 cut(s) | 308, 396, 448, 493, 613, 629, 639, 784, 790 |
| Hpy188III | TCNNGA | 3 cut(s) | 321, 795, 838 |
| Hpy8I | GTNNAC | 1 cut(s) | 430 |
| HpyAV | CCTTC | 3 cut(s) | 18, 404, 624 |
| HpyCH4III | ACNGT | 1 cut(s) | 859 |
| HpyCH4IV | ACGT | 1 cut(s) | 523 |
| HpyCH4V | TGCA | 6 cut(s) | 557, 574, 581, 778, 961, 977 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 104, 292, 767 |
| HpyF3I | CTNAG | 4 cut(s) | 271, 546, 718, 783 |
| HpySE526I | ACGT | 1 cut(s) | 523 |
| Hsp92I | GRCGYC | 1 cut(s) | 634 |
| Hsp92II | CATG | 4 cut(s) | 418, 517, 592, 748 |
| KroI | GCCGGC | 1 cut(s) | 98 |
| KroNI | GCCGGC | 1 cut(s) | 100 |
| Kzo9I | GATC | 2 cut(s) | 163, 308 |
| LmnI | GCTCC | 4 cut(s) | 38, 331, 705, 942 |
| Lsp1109I | GCAGC | 2 cut(s) | 762, 989 |
| LweI | GCATC | 2 cut(s) | 926, 989 |
| MaeI | CTAG | 1 cut(s) | 519 |
| MaeII | ACGT | 1 cut(s) | 523 |
| MaeIII | GTNAC | 5 cut(s) | 340, 503, 664, 838, 853 |
| MalI | GATC | 2 cut(s) | 165, 310 |
| MboI | GATC | 2 cut(s) | 163, 308 |
| MboII | GAAGA | 4 cut(s) | 158, 196, 222, 461 |
| MfeI | CAATTG | 1 cut(s) | 539 |
| MflI | RGATCY | 1 cut(s) | 163 |
| MhlI | GDGCHC | 4 cut(s) | 72, 328, 359, 404 |
| MlsI | TGGCCA | 2 cut(s) | 282, 928 |
| MluCI | AATT | 3 cut(s) | 58, 289, 539 |
| MluNI | TGGCCA | 2 cut(s) | 282, 928 |
| MlyI | GAGTC | 3 cut(s) | 578, 794, 839 |
| Mox20I | TGGCCA | 2 cut(s) | 282, 928 |
| MreI | CGCCGGCG | 1 cut(s) | 98 |
| MroNI | GCCGGC | 1 cut(s) | 98 |
| MroXI | GAANNNNTTC | 1 cut(s) | 214 |
| MscI | TGGCCA | 2 cut(s) | 282, 928 |
| MseI | TTAA | 3 cut(s) | 138, 683, 890 |
| MslI | CAYNNNNRTG | 1 cut(s) | 419 |
| Msp20I | TGGCCA | 2 cut(s) | 282, 928 |
| MspA1I | CMGCKG | 1 cut(s) | 1032 |
| MspI | CCGG | 1 cut(s) | 99 |
| MspR9I | CCNGG | 1 cut(s) | 207 |
| MunI | CAATTG | 1 cut(s) | 539 |
| MvaI | CCWGG | 1 cut(s) | 207 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 104, 292, 767 |
| NaeI | GCCGGC | 1 cut(s) | 100 |
| NcoI | CCATGG | 1 cut(s) | 588 |
| NdeII | GATC | 2 cut(s) | 163, 308 |
| NgoMIV | GCCGGC | 1 cut(s) | 98 |
| NlaIII | CATG | 4 cut(s) | 418, 517, 592, 748 |
| NmeAIII | GCCGAG | 1 cut(s) | 791 |
| NmuCI | GTSAC | 5 cut(s) | 340, 503, 664, 838, 853 |
| PceI | AGGCCT | 1 cut(s) | 479 |
| PdiI | GCCGGC | 1 cut(s) | 100 |
| PdmI | GAANNNNTTC | 1 cut(s) | 214 |
| PfeI | GAWTC | 2 cut(s) | 494, 791 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1025 |
| PkrI | GCNGC | 3 cut(s) | 777, 979, 1031 |
| PleI | GAGTC | 3 cut(s) | 578, 793, 838 |
| PpsI | GAGTC | 3 cut(s) | 578, 793, 838 |
| Psp124BI | GAGCTC | 1 cut(s) | 328 |
| Psp6I | CCWGG | 1 cut(s) | 205 |
| PspGI | CCWGG | 1 cut(s) | 205 |
| PsuI | RGATCY | 1 cut(s) | 163 |
| RseI | CAYNNNNRTG | 1 cut(s) | 419 |
| SacI | GAGCTC | 1 cut(s) | 328 |
| SaqAI | TTAA | 3 cut(s) | 138, 683, 890 |
| SatI | GCNGC | 3 cut(s) | 776, 978, 1030 |
| Sau3AI | GATC | 2 cut(s) | 163, 308 |
| SchI | GAGTC | 3 cut(s) | 578, 794, 839 |
| ScrFI | CCNGG | 1 cut(s) | 207 |
| SduI | GDGCHC | 4 cut(s) | 72, 328, 359, 404 |
| SfaNI | GCATC | 2 cut(s) | 926, 989 |
| SfcI | CTRYAG | 3 cut(s) | 159, 312, 345 |
| SgrAI | CRCCGGYG | 1 cut(s) | 98 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 419 |
| Sse9I | AATT | 3 cut(s) | 58, 289, 539 |
| SseBI | AGGCCT | 1 cut(s) | 479 |
| SsiI | CCGC | 1 cut(s) | 1030 |
| SspMI | CTAG | 1 cut(s) | 519 |
| SstI | GAGCTC | 1 cut(s) | 328 |
| StuI | AGGCCT | 1 cut(s) | 479 |
| StyD4I | CCNGG | 1 cut(s) | 205 |
| StyI | CCWWGG | 2 cut(s) | 330, 588 |
| TaaI | ACNGT | 1 cut(s) | 859 |
| TaiI | ACGT | 1 cut(s) | 526 |
| TasI | AATT | 3 cut(s) | 58, 289, 539 |
| TauI | GCSGC | 1 cut(s) | 1032 |
| TfiI | GAWTC | 2 cut(s) | 494, 791 |
| Tru1I | TTAA | 3 cut(s) | 138, 683, 890 |
| Tru9I | TTAA | 3 cut(s) | 138, 683, 890 |
| TscAI | CASTG | 5 cut(s) | 262, 715, 777, 822, 850 |
| TseFI | GTSAC | 5 cut(s) | 340, 503, 664, 838, 853 |
| TseI | GCWGC | 2 cut(s) | 775, 977 |
| Tsp45I | GTSAC | 5 cut(s) | 340, 503, 664, 838, 853 |
| TspDTI | ATGAA | 2 cut(s) | 161, 864 |
| TspGWI | ACGGA | 1 cut(s) | 48 |
| TspRI | CASTG | 5 cut(s) | 262, 715, 777, 822, 850 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1025 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 204 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 936 |
| XmnI | GAANNNNTTC | 1 cut(s) | 214 |
| XspI | CTAG | 1 cut(s) | 519 |